Pregenerated sensors for GAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030498Ensembl transcript IDs: ENSMUST00000051912.13, ENSMUST00000107591.9, ENSMUST00000129604.8, ENSMUST00000145049.2, ENSMUST00000208711.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCGTCCACACGGGAGATCTGCAGCATGCGGCAGGGGTCATGCTTaGGCAGATAGCCAGCGAAGGTCTCCCAGCCTCCTCCCACTCGGA | + |
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Preference number: 1 (lower is better) Translates to: CRPHGRSAACGRGHA*ADSQRRSPSLLPLG Trigger: TCCGAGTGGGAGGAGGCTGGGAGACCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCCGCATGCTGCAGATCTCCCGTGTGGACGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR TCA 90 bp | AGCATCCTGATGAAGAGGATCTTCTCTCCCACTCGGTATCGACCTTaGGAGAGCCGCTCCACACAGAACTTGGTTGGGCACTTGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SILMKRIFSPTRYRP*ESRSTQNLVGHLQG Trigger: TCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTGGGAGAGAAGATCCTCTTCATCAGGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CCA 90 bp | GGCAGAGACCACCAGGTAATTATCAGGATTCATGTCCTTCAGGGTTaGGGATTTGCTCTGGACAGGGGATGTCTTGCCGTCCACACGGGA | + |
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Preference number: 1 (lower is better) Translates to: GRDHQVIIRIHVLQG*GFALDRGCLAVHTG Trigger: TCCCGTGTGGACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATGAATCCTGATAATTACCTGGTGGTCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CCA 90 bp | CTCCCACTCGGTATCGACCTTGAGAGAGCCGCTCCACACAGAACTTaGTTGGGCACTTGCAGGGAGGATCTTCAGAGATTCTTTTTACTG | + |
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Preference number: 1 (lower is better) Translates to: LPLGIDLERAAPHRT*LGTCREDLQRFFLL Trigger: CAGTAAAAAGAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CCA 90 bp | CACTCGGTATCGACCTTGAGAGAGCCGCTCCACACAGAACTTGGTTaGGCACTTGCAGGGAGGATCTTCAGAGATTCTTTTTACTGCATC | + |
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Preference number: 1 (lower is better) Translates to: HSVSTLREPLHTELG*ALAGRIFRDSFYCI Trigger: GATGCAGTAAAAAGAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR TCA 90 bp | TTGCTGCAAGCTGACAGAGCAAGGCACCATTATCCAACTTCTCCATaGAGGTTTCTGCTGTTATCTCTTTCCCATAGCTGCCACAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LLQADRARHHYPTSP*RFLLLSLSHSCHKA Trigger: TGCCTTGTGGCAGCTATGGGAAAGAGATAACAGCAGAAACCTTCATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR GCA 90 bp | CTGACAGAGCAAGGCACCATTATCCAACTTCTCCATGAAGGTTTCTaGTGTTATCTCTTTCCCATAGCTGCCACAAGGCAACTTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LTEQGTIIQLLHEGF*CYLFPIAATRQLSQ Trigger: CTGGGAAAGTTGCCTTGTGGCAGCTATGGGAAAGAGATAACAGCAGAAACCTTCATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR GCA 90 bp | GCAATCCGACCAAGCTCTAGCAAACAGAGACACACTTCTCGGGGCTaGTTATGCAGAACCAGGCCTTCAGATTCAAAAAGACATGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: AIRPSSSKQRHTSRG*LCRTRPSDSKRHVS Trigger: TGAAACATGTCTTTTTGAATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGAAGTGTGTCTCTGTTTGCTAGAGCTTGGTCGGATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR GCA 90 bp | AGGCTTGTTGGCATCCATACTCTCTTTGAATTTCTCCTGCACAGTTaGTGCAAGCTGACAGAGCAAGGCACCATTATCCAACTTCTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: RLVGIHTLFEFLLHS*CKLTEQGTIIQLLH Trigger: ATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR TCA 90 bp | GCATCCATACTCTCTTTGAATTTCTCCTGCACAGTTGCTGCAAGCTaGCAGAGCAAGGCACCATTATCCAACTTCTCCATGAAGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: ASILSLNFSCTVAAS*QSKAPLSNFSMKVS Trigger: AGAAACCTTCATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR TCA 90 bp | TTCTGGGGTGCTTTAGCTCATAGACATACAGCAGGCACTTTCTGTTaGCCTACCCATTTAAGTAAATACAGTCTCCTAGTCATGATCACC | + |
|
Preference number: 1 (lower is better) Translates to: FWGALAHRHTAGTFC*PTHLSKYSLLVMIT Trigger: GGTGATCATGACTAGGAGACTGTATTTACTTAAATGGGTAGGTCAACAGAAAGTGCCTGCTGTATGTCTATGAGCTAAAGCACCCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR TCA 90 bp | CCATTTGAGTATTTTCCTGTCTGCTGTGTGGTTTTTCAGAGCATGTaGACTACATTGACTACACTGAAGAATGGACACAGGCCATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PFEYFPVCCVVFQSM*TTLTTLKNGHRPLH Trigger: ATGCAATGGCCTGTGTCCATTCTTCAGTGTAGTCAATGTAGTTCACATGCTCTGAAAAACCACACAGCAGACAGGAAAATACTCAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR TCA 90 bp | AGGCAAAGTTCTACAGATGCATTACAAATAAATAGTGCTACCATTTaGGTATTTTCCTGTCTGCTGTGTGGTTTTTCAGAGCATGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: RQSSTDALQINSATI*VFSCLLCGFSEHVN Trigger: GTTCACATGCTCTGAAAAACCACACAGCAGACAGGAAAATACTCAAATGGTAGCACTATTTATTTGTAATGCATCTGTAGAACTTTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR CAA 90 bp | CAGCATCCTGATGAAGAGGATCTTCTCTCCCACTCGGTATCGACCTaGAGAGAGCCGCTCCACACAGAACTTGGTTGGGCACTTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QHPDEEDLLSHSVST*REPLHTELGWALAG Trigger: CCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTGGGAGAGAAGATCCTCTTCATCAGGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCCCACTCGGACCATCACATGCTTGTTGTGCAGCATCCTGATGAAGAGGAAAGGAGCCCGAGGGTaGACTGGCTTTGCAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: PPPTRTITCLLCSILMKRKGARG*TGFARN Trigger: ATTCCTTGCAAAGCCAGTGCACCCTCGGGCTCCTTT...CCTCTTCATCAGGATGCTGCACAACAAGCATGTGATGGTCCGAGTGGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCCCACTCGGACCATCACATGCTTGTTGTGCAGCATCCTGATGAAGAGGTCTCGGGGCTGCTTATaGAGAACCAGGCCTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PPPTRTITCLLCSILMKRSRGCL*RTRPSD Trigger: ATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGA...CCTCTTCATCAGGATGCTGCACAACAAGCATGTGATGGTCCGAGTGGGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CAA 90 bp | CCACTCGGTATCGACCTTGAGAGAGCCGCTCCACACAGAACTTGGTaGGGCACTTGCAGGGAGGATCTTCAGAGATTCTTTTTACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: PLGIDLERAAPHRTW*GTCREDLQRFFLLH Trigger: ATGCAGTAAAAAGAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGCTGCAATCCGACCAAGCTCTAGCAAACAGAGACACACTTCTCGGGGCTGGTCCTTATTTCCAGTaGTGTGGGCTGTTTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: TWLQSDQALANRDTLLGAGPYFQ*CGLFVY Trigger: ATAAACAAACAGCCCACATCACTGGAAATAAGGACC...AGCCCCGAGAAGTGTGTCTCTGTTTGCTAGAGCTTGGTCGGATTGCAGCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTATCTCTTTCCCATAGCTGCCACAAGGCAACTTTCCCAGGCCCTCCTCTTCCTGTCTGCTGTGTaGTTTTTCAGAGCATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CCYLFPIAATRQLSQALLFLSAV*FFRACE Trigger: TTCACATGCTCTGAAAAACCACACAGCAGACAGGAA...GAGGAGGGCCTGGGAAAGTTGCCTTGTGGCAGCTATGGGAAAGAGATAACAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTCTACACGCTCCACACCATACCTaGCTGCAATCCGACCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TSNKHHLHLPSPHEGSLHAPHHT*LQSDQA Trigger: AGCTTGGTCGGATTGCAGCCAGGTATGGTGTGGAGC...GTGTAGACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CAA 90 bp | GCTTTGCAAGGAATCTTCTTCAGTGGTAGGGTCTTGGCAGGCTTGTaGGCATCCATACTCTCTTTGAATTTCTCCTGCACAGTTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ALQGIFFSGRVLAGL*ASILSLNFSCTVAA Trigger: TGCAGCAACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCCTTGCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR CAA 90 bp | CTGGCTTTGCAAGGAATCTTCTTCAGTGGTAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCTTTGAATTTCTCCTGCACAGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LALQGIFFSGRVLAG*LASILSLNFSCTVA Trigger: AGCAACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCCTTGCAAAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTCTACACAGCCCGAGGGTGCACTaGCTTTGCAAGGAATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TSNKHHLHLPSPHEGSLHSPRVH*LCKESS Trigger: AGAAGATTCCTTGCAAAGCCAGTGCACCCTCGGGCT...GTGTAGACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTCTACACCACACAGAACTTGGTTaGGCACTTGCAGGGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: TSNKHHLHLPSPHEGSLHHTELG*ALAGRI Trigger: GATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTG...GTGTAGACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTGCTCCACACAGAACTTaGTTGGGCACTTGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FATSNKHHLHLPSPHEGSAPHRT*LGTCRE Trigger: CTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGC...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGCCAAGTTCATCTTACCTGGCACAAAGGCTGTAGGCTTTCTTTATTTTTATCCACACGGGAGATCTaGAGCATGCGGCAGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LCQVHLTWHKGCRLSLFLSTREI*SMRQGS Trigger: TGACCCCTGCCGCATGCTGCAGATCTCCCGTGTGGA...TAAAAATAAAGAAAGCCTACAGCCTTTGTGCCAGGTAAGATGAACTTGGCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCCCCCAGAGGTTGGTTTaGTCAGGGATCAGAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCPQRLV*SGIRDE Trigger: TTCATCTCTGATCCCTGACCAAACCAACCTCTGGGG...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCAACTCCCAAATCTCGGCACCAGGATAGGAAATTGGCTGTGTTGTCTCGGAGTCACAAATCTTGTTaGTTCAAGCCATCTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SSTPKSRHQDRKLAVLSRSHKSC*FKPSLL Trigger: CAAAAGAGATGGCTTGAATCAACAAGATTTGTGACT...CCGAGACAACACAGCCAATTTCCTATCCTGGTGCCGAGATTTGGGAGTTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGCTCCTGCACAGTTGCTaGAAGCTGACAGAGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: KAIFQVNVNISEVSFPVKLLHSC*KLTEQG Trigger: GCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAG...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTAGGGTGCACTGGCTTTaGAAGGAATCTTCTTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: FATSNKHHLHLPSPHEGSRVHWL*KESSSV Trigger: CACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCT...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGACAGTTGCTGCAAGCTaGCAGAGCAAGGCACCATTA | + |
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Preference number: 2 (lower is better) Translates to: KSVWTISCCLLIQNSSVLTVAAS*QSKAPL Trigger: TAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGT...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACTCTCTTTCCCATAGCTaGCACAAGGCAACTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYSLSHS*HKATFP Trigger: TGGGAAAGTTGCCTTGTGGCAGCTATGGGAAAGAGA...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTTTCCTGTCTGCTGTGTaGTTTTTCAGAGCATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVFLSAV*FFRACE Trigger: TTCACATGCTCTGAAAAACCACACAGCAGACAGGAA...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCAATAGTGCTACCATTTaGGTATTTTCCTGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCNSATI*VFSCLL Trigger: CAGCAGACAGGAAAATACTCAAATGGTAGCACTATT...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGGAGTATTTTCCTGTCTaGTGTGTGGTTTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ISVDNILLFIDTKQLCPGEYFPV*CVVFQS Trigger: GCTCTGAAAAACCACACAGCAGACAGGAAAATACTC...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTCTATTCCTAAGGGGCTaGACAGGCAACATCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QGSEMNFKAIFQVNVNISLFLRG*TGNIQK Trigger: CTTTTGGATGTTGCCTGTGCAGCCCCTTAGGAATAG...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTTCCTGTCTGCTGTGTaGTTTTTCAGAGCATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: ISVDNILLFIDTKQLCPGFLSAV*FFRACE Trigger: TTCACATGCTCTGAAAAACCACACAGCAGACAGGAA...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTAAAACAGCTCTGTCCTaGGTATACAAGTCTGTAACA | + |
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Preference number: 2 (lower is better) Translates to: FATSNKHHLHLPSPHEGSKTALS*VYKSVT Trigger: TGTTACAGACTTGTATACCCAGGACAGAGCTGTTTT...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGAATAGTGCTACCATTTaGGTATTTTCCTGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ISVDNILLFIDTKQLCPGNSATI*VFSCLL Trigger: CAGCAGACAGGAAAATACTCAAATGGTAGCACTATT...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTTATCTTGCTGTTTATTaGTACAAAACAGCTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: FATSNKHHLHLPSPHEGSYLAVY*YKTALS Trigger: GGACAGAGCTGTTTTGTATCAATAAACAGCAAGATA...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACGAGTATTTTCCTGTCTaGTGTGTGGTTTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYEYFPV*CVVFQS Trigger: GCTCTGAAAAACCACACAGCAGACAGGAAAATACTC...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAGAGTATTTTCCTGTCTaGTGTGTGGTTTTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VWTISCCLLIQNSSVLGIEYFPV*CVVFQS Trigger: GCTCTGAAAAACCACACAGCAGACAGGAAAATACTC...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATATTCCTGTCTGCTGTGTaGTTTTTCAGAGCATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VWTISCCLLIQNSSVLGIFLSAV*FFRACE Trigger: TTCACATGCTCTGAAAAACCACACAGCAGACAGGAA...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAAATAGTGCTACCATTTaGGTATTTTCCTGTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VWTISCCLLIQNSSVLGINSATI*VFSCLL Trigger: CAGCAGACAGGAAAATACTCAAATGGTAGCACTATT...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTGTCAGGGATCAGAGATaGACTTTAAGGCAATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FKAIFQVNVNISEVSFPVVRDQR*TLRQSS Trigger: GGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGAC...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCCTCCATGAAGGTTTCTaGTGTTATCTCTTTCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: GQGSEMNFKAIFQVNVNILHEGF*CYLFPI Trigger: TATGGGAAAGAGATAACAGCAGAAACCTTCATGGAG...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTAATAGTGCTACCATTTaGGTATTTTCCTGTCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QGSEMNFKAIFQVNVNISNSATI*VFSCLL Trigger: CAGCAGACAGGAAAATACTCAAATGGTAGCACTATT...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTGAGTATTTTCCTGTCTaGTGTGTGGTTTTTCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FKAIFQVNVNISEVSFPVEYFPV*CVVFQS Trigger: GCTCTGAAAAACCACACAGCAGACAGGAAAATACTC...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTTTATTTCCAGTGATGTaGGCTGTTTGTTTATTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: FKAIFQVNVNISEVSFPVLFPVM*AVCLFV Trigger: GACAAATAAACAAACAGCCCACATCACTGGAAATAA...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | CACGGGAGATCTGCAGCATGCGGCAGGGGTCATGCTTaGGCAGATAGCCAGCGAAGGTCTCCCAGCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HGRSAACGRGHA*ADSQRRSPSLL Trigger: GAGGAGGCTGGGAGACCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCCGCATGCTGCAGATCTCCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR GCA 72 bp | TCAGGGTTGGGGATTTGCTCTGGACAGGGGATGTCTTaGCGTCCACACGGGAGATCTGCAGCATGCGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLGICSGQGMS*RPHGRSAACGR Trigger: CCTGCCGCATGCTGCAGATCTCCCGTGTGGACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTCCCACTCGGACCATCACATGCTTGTTGTGCAGCATCCTGATGAAGAGGCGCTCCACACAGAACTaGGTTGGGCACTTGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPPTRTITCLLCSILMKRRSTQN*VGHLQG Trigger: TCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCG...CCTCTTCATCAGGATGCTGCACAACAAGCATGTGATGGTCCGAGTGGGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CCA 72 bp | TCAGGATTCATGTCCTTCAGGGTTGGGGATTTGCTCTaGACAGGGGATGTCTTGCCGTCCACACGGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SGFMSFRVGDLL*TGDVLPSTREI Trigger: GATCTCCCGTGTGGACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATGAATCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTTCAGGGTTGGGGATTTGCTCTGGACAGGGGATGTCTTGCCGTCCACACGACCATCACATGCTTGTaGTGCAGCATCCTGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLQGWGFALDRGCLAVHTTITCL*CSILMK Trigger: CTTCATCAGGATGCTGCACAACAAGCATGTGATGGT...CGTGTGGACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR GCA 72 bp | AAGGTCTCCCAGCCTCCTCCCACTCGGACCATCACATaGTTGTTGTGCAGCATCCTGATGAAGAGGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KVSQPPPTRTIT*LLCSILMKRIF Trigger: GAAGATCCTCTTCATCAGGATGCTGCACAACAAGCATGTGATGGTCCGAGTGGGAGGAGGCTGGGAGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CCA 72 bp | GGTATCGACCTTGAGAGAGCCGCTCCACACAGAACTTaGTTGGGCACTTGCAGGGAGGATCTTCAGAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: GIDLERAAPHRT*LGTCREDLQRF Trigger: GAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATCCGACCAAGCTCTAGCAAACAGAGACACACTTCTCGGGGCTGCTTATGCCACCAGGATAGGAAATaGGCTGTGTTGTCTCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AIRPSSSKQRHTSRGCLCHQDRK*AVLSRA Trigger: TGCCCGAGACAACACAGCCAATTTCCTATCCTGGTG...GCATAAGCAGCCCCGAGAAGTGTGTCTCTGTTTGCTAGAGCTTGGTCGGATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CCA 72 bp | TCGACCTTGAGAGAGCCGCTCCACACAGAACTTGGTTaGGCACTTGCAGGGAGGATCTTCAGAGATTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: STLREPLHTELG*ALAGRIFRDSF Trigger: AAAAGAATCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCGGCTCTCTCAAGGTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CCA 72 bp | CACCAGGTAATTATCAGGATTCATGTCCTTCAGGGTTaGGGATTTGCTCTGGACAGGGGATGTCTTGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: HQVIIRIHVLQG*GFALDRGCLAV Trigger: GACGGCAAGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATGAATCCTGATAATTACCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CCA 72 bp | GGCTGCACAGGCAACATCCAAAAGTACCCCAGAGGTTaGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GCTGNIQKYPRG*FGQGSEMNFKA Trigger: TGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCTGGGGTACTTTTGGATGTTGCCTGTGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR GCA 72 bp | CCAAGCTCTAGCAAACAGAGACACACTTCTCGGGGCTaGTTATGCAGAACCAGGCCTTCAGATTCAAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSSSKQRHTSRG*LCRTRPSDSKR Trigger: TCTTTTTGAATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGAAGTGTGTCTCTGTTTGCTAGAGCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAACTCCCAAATCTCGGCACCAGGATAGGAAATTGGCTGTGTTGTCTCGGGAGTGATGTGGGCTGTTaGTTTATTTGTCCATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HQLPNLGTRIGNWLCCLGSDVGC*FICPSV Trigger: AACAGATGGACAAATAAACAAACAGCCCACATCACT...CCCGAGACAACACAGCCAATTTCCTATCCTGGTGCCGAGATTTGGGAGTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FATSNKHHLHLPSPHEGSRVLAG*LASILS Trigger: AGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCT...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | CTCTCTTTGAATTTCTCCTGCACAGTTGCTGCAAGCTaGCAGAGCAAGGCACCATTATCCAACTTCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSLNFSCTVAAS*QSKAPLSNFSM Trigger: CATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAATTCAAAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR GCA 72 bp | GGCATCCATACTCTCTTTGAATTTCTCCTGCACAGTTaGTGCAAGCTGACAGAGCAAGGCACCATTATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GIHTLFEFLLHS*CKLTEQGTIIQ Trigger: TTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAACTCCCAAATCTCGGCACCAGGATAGGAAATTGGCTGTGTTGTCTCGGGGTGATCTCCCAAAACTaGAAAGTCACAAATCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HQLPNLGTRIGNWLCCLGVISQN*KVTNLV Trigger: AACAAGATTTGTGACTTTCAAGTTTTGGGAGATCAC...CCCGAGACAACACAGCCAATTTCCTATCCTGGTGCCGAGATTTGGGAGTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR GCA 72 bp | TCTAGCAAACAGAGACACACTTCTCGGGGCTGCTTATaGAGAACCAGGCCTTCAGATTCAAAAAGACATGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSKQRHTSRGCL*RTRPSDSKRHV Trigger: AACATGTCTTTTTGAATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGAAGTGTGTCTCTGTTTGCTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGAATGGACACAGGCCATaGCATGAGTCCTCTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISVDNILLFIDTKQLCPGNGHRP*HESSFR Trigger: TCTGAAAGAGGACTCATGCAATGGCCTGTGTCCATT...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCTACTTCGAACAAACACCACCTACATTTACCTTCCCCACATGAAGGTAGTCTACACAGCCATACCTaGACACTCTTCATATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FATSNKHHLHLPSPHEGSLHSHT*TLFILL Trigger: CAGCAATATGAAGAGTGTCAAGGTATGGCTGTGTAG...ACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTTGTTCGAAGTAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | CTTCCCCACATGAAGGTAGTCTACACAGCCATACCTTaGCACTCTTCATATTGCTGGGAAATCAGTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: LPHMKVVYTAIP*HSSYCWEISRF Trigger: AAATCTACTGATTTCCCAGCAATATGAAGAGTGTCAAGGTATGGCTGTGTAGACTACCTTCATGTGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTATTTCTCCTGCACAGTaGCTGCAAGCTGACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QGSEMNFKAIFQVNVNISISPAQ*LQADRA Trigger: TGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAAT...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGGAGGGTGCACTGGCTTaGCAAGGAATCTTCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KAIFQVNVNISEVSFPVKEGALA*QGIFFS Trigger: ACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCTC...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | TATTTTCCTGTCTGCTGTGTGGTTTTTCAGAGCATGTaGACTACATTGACTACACTGAAGAATGGACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: YFPVCCVVFQSM*TTLTTLKNGHR Trigger: CCTGTGTCCATTCTTCAGTGTAGTCAATGTAGTTCACATGCTCTGAAAAACCACACAGCAGACAGGAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGAATGGACACAGGCCATaGCATGAGTCCTCTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KAIFQVNVNISEVSFPVKNGHRP*HESSFR Trigger: TCTGAAAGAGGACTCATGCAATGGCCTGTGTCCATT...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTAATGGACACAGGCCATaGCATGAGTCCTCTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGSEMNFKAIFQVNVNISNGHRP*HESSFR Trigger: TCTGAAAGAGGACTCATGCAATGGCCTGTGTCCATT...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCAGGCCCTCCTCTTCTTaGCTCTGGTCCTTATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FQVNVNISEVSFPVKYYGRPSSS*LWSLFP Trigger: TGGAAATAAGGACCAGAGCAAAGAAGAGGAGGGCCT...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAATGGACACAGGCCATaGCATGAGTCCTCTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FKAIFQVNVNISEVSFPVNGHRP*HESSFR Trigger: TCTGAAAGAGGACTCATGCAATGGCCTGTGTCCATT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCGCATCCATACTCTCTTaGAATTTCTCCTGCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIASILS*NFSCTV Trigger: AACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGC...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGTCCATCTGTTTGTTaGTTCTTGGATTTGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: FQVNVNISEVSFPVKYYGCPSVC*FLDLGH Trigger: GTGTCCCAAATCCAAGAACAAACAAACAGATGGACA...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | ATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTaGGAAAACTCTCTACTATATAGTGCTCTCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: ISEVSFPVKYYG*ENSLLYSALRQ Trigger: TTGTCTGAGAGCACTATATAGTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTTGTCCATCTGTTaGTTTGTTCTTGGATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KAIFQVNVNISEVSFPVKYLSIC*FVLGFG Trigger: CCCAAATCCAAGAACAAACAAACAGATGGACAAATA...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR TCA 72 bp | TTTTTAAATCAGTGTGGACAATATCTTGCTGTTTATTaGTACAAAACAGCTCTGTCCTGGGTATACAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLNQCGQYLAVY*YKTALSWVYKS Trigger: AGACTTGTATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTTAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | TCATCAACTCCCAAATCTCGGCACCAGGATAGGAAATTGGCTGTGTTGTCTCGGACAGGCCAGGTCCGCTaGGAACCTTGGGGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTPKSRHQDRKLAVLSRTGQVR*EPWGSG Trigger: CCCTGAGCCCCAAGGTTCGCAGCGGACCTGGCCTGT...CCGAGACAACACAGCCAATTTCCTATCCTGGTGCCGAGATTTGGGAGTTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| CDS-3UTR CCA 90 bp | GACCAAGCTCTAGCAAACAGAGACACACTTCTCGGGGCTGCTTATGCAGAACCAGTCCGCTGCGAACCTTaGGGCTCAGGGCAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DQALANRDTLLGAAYAEPVRCEP*GSGQCT Trigger: TGTGCACTGCCCTGAGCCCCAAGGTTCGCAGCGGAC...TGGTTCTGCATAAGCAGCCCCGAGAAGTGTGTCTCTGTTTGCTAGAGCTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTACAGGCCAGGTCCGCTaGGAACCTTGGGGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVTGQVR*EPWGSG Trigger: CCCTGAGCCCCAAGGTTCGCAGCGGACCTGGCCTGT...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGACAGGCCAGGTCCGCTaGGAACCTTGGGGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGTGQVR*EPWGSG Trigger: CCCTGAGCCCCAAGGTTCGCAGCGGACCTGGCCTGT...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCGTCCGCTGCGAACCTTaGGGCTCAGGGCAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCVRCEP*GSGQCT Trigger: TGTGCACTGCCCTGAGCCCCAAGGTTCGCAGCGGAC...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTCCACACGGGAGATCTaGAGCATGCGGCAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGSTREI*SMRQGS Trigger: TGACCCCTGCCGCATGCTGCAGATCTCCCGTGTGGA...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCGTCCGCTGCGAACCTTaGGGCTCAGGGCAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIVRCEP*GSGQCT Trigger: TGTGCACTGCCCTGAGCCCCAAGGTTCGCAGCGGAC...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAGTCCGCTGCGAACCTTaGGGCTCAGGGCAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGIVRCEP*GSGQCT Trigger: TGTGCACTGCCCTGAGCCCCAAGGTTCGCAGCGGAC...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACGGCAGGGGTCATGCTTaGGCAGATAGCCAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYGRGHA*ADSQRR Trigger: CCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCC...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAGGCAGGGGTCATGCTTaGGCAGATAGCCAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGIGRGHA*ADSQRR Trigger: CCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCC...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGGGACAGGGGATGTCTTaGCGTCCACACGGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGGQGMS*RPHGRS Trigger: AGATCTCCCGTGTGGACGGCAAGACATCCCCTGTCC...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCGCTCCACACCATACCTaGCTGCAATCCGACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCAPHHT*LQSDQA Trigger: AGCTTGGTCGGATTGCAGCCAGGTATGGTGTGGAGC...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACACTCGGTATCGACCTTaGGAGAGCCGCTCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYTRYRP*ESRSTQ Trigger: CTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGT...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCTCTCGGGGCTGCTTATaGAGAACCAGGCCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCSRGCL*RTRPSD Trigger: ATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGA...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGTCCACACGGGAGATCTaGAGCATGCGGCAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSVWTISCCLLIQNSSVLSTREI*SMRQGS Trigger: TGACCCCTGCCGCATGCTGCAGATCTCCCGTGTGGA...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAGCCCGAGGGTGCACTaGCTTTGCAAGGAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVSPRVH*LCKESS Trigger: AGAAGATTCCTTGCAAAGCCAGTGCACCCTCGGGCT...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTCACACAGAACTTGGTTaGGCACTTGCAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVHTELG*ALAGRI Trigger: GATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTG...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTCATGTCCTTCAGGGTTaGGGATTTGCTCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVHVLQG*GFALDR Trigger: CCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATG...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| 3UTR CAA 72 bp | GGAATCTTCTTCAGTGGTAGGGTCTTGGCAGGCTTGTaGGCATCCATACTCTCTTTGAATTTCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GIFFSGRVLAGL*ASILSLNFSCT Trigger: TGTGCAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CAA 72 bp | CAAGGAATCTTCTTCAGTGGTAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCTTTGAATTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIFFSGRVLAG*LASILSLNFSC Trigger: GCAGGAGAAATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| 3UTR CAA 72 bp | CTGGCTTTGCAAGGAATCTTCTTCAGTGGTAGGGTCTaGGCAGGCTTGTTGGCATCCATACTCTCTTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LALQGIFFSGRV*AGLLASILSLN Trigger: ATTCAAAGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCTACCACTGAAGAAGATTCCTTGCAAAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCGGCAGGGGTCATGCTTaGGCAGATAGCCAGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGGRGHA*ADSQRR Trigger: CCTTCGCTGGCTATCTGCTCAAGCATGACCCCTGCC...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATACTCCTGCACAGTTGCTaGAAGCTGACAGAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGILLHSC*KLTEQG Trigger: GCCTTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAG...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTCTCGGGGCTGCTTATaGAGAACCAGGCCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGSRGCL*RTRPSD Trigger: ATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGA...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTACTTGGTTGGGCACTTaGAGGGAGGATCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVTWLGT*REDLQR Trigger: TCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGT...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTACTCGGACCATCACATaGTTGTTGTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVTRTIT*LLCSIL Trigger: CAGGATGCTGCACAACAAGCATGTGATGGTCCGAGT...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGACAGGGGATGTCTTaGCGTCCACACGGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVWTISCCLLIQNSSVLGQGMS*RPHGRS Trigger: AGATCTCCCGTGTGGACGGCAAGACATCCCCTGTCC...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGGGACAGGGGATGTCTTaGCGTCCACACGGGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KAIFQVNVNISEVSFPVKGQGMS*RPHGRS Trigger: AGATCTCCCGTGTGGACGGCAAGACATCCCCTGTCC...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTCAGGGTTGGGGATTTaGTCTGGACAGGGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGSGLGI*SGQGMS Trigger: AGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGA...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCGCTCCACACCATACCTaGCTGCAATCCGACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIAPHHT*LQSDQA Trigger: AGCTTGGTCGGATTGCAGCCAGGTATGGTGTGGAGC...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCGCTCCACACAGAACTTaGTTGGGCACTTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIAPHRT*LGTCRE Trigger: CTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGC...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAAGCCACTGGCTGTACTaGTGCATATCAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGISHWLY*CISDRP Trigger: TGGCCTGTCTGATATGCATCAGTACAGCCAGTGGCT...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCAGCCACTGGCTGTACTaGTGCATATCAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNISHWLY*CISDRP Trigger: TGGCCTGTCTGATATGCATCAGTACAGCCAGTGGCT...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCACTCGGTATCGACCTTaGGAGAGCCGCTCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGTRYRP*ESRSTQ Trigger: CTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGT...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTACTCGGTATCGACCTTaGGAGAGCCGCTCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FKAIFQVNVNISEVSFPVTRYRP*ESRSTQ Trigger: CTGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTTTTCTCCTGCACAGTTaGTGCAAGCTGACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVFLLHS*CKLTEQ Trigger: TTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAA...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCAAAGGAGCCCGAGGGTaGACTGGCTTTGCAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIKGARG*TGFARN Trigger: ATTCCTTGCAAAGCCAGTGCACCCTCGGGCTCCTTT...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATACACACAGAACTTGGTTaGGCACTTGCAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGIHTELG*ALAGRI Trigger: GATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTG...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGGCTCCACACAGAACTTaGTTGGGCACTTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAIFQVNVNISEVSFPVKAPHRT*LGTCRE Trigger: CTCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGC...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTAGCCACTGGCTGTACTaGTGCATATCAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSEMNFKAIFQVNVNISSHWLY*CISDRP Trigger: TGGCCTGTCTGATATGCATCAGTACAGCCAGTGGCT...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGAGGGTGCACTGGCTTTaGAAGGAATCTTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVDNILLFIDTKQLCPGRVHWL*KESSSV Trigger: CACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCT...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGAAAGGAGCCCGAGGGTaGACTGGCTTTGCAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVWTISCCLLIQNSSVLKGARG*TGFARN Trigger: ATTCCTTGCAAAGCCAGTGCACCCTCGGGCTCCTTT...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCACTCGGACCATCACATaGTTGTTGTGCAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQGSEMNFKAIFQVNVNITRTIT*LLCSIL Trigger: CAGGATGCTGCACAACAAGCATGTGATGGTCCGAGT...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGTCAGGGTTGGGGATTTaGTCTGGACAGGGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVWTISCCLLIQNSSVLSGLGI*SGQGMS Trigger: AGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGA...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTTCAGGGTTGGGGATTTaGTCTGGACAGGGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSEMNFKAIFQVNVNISSGLGI*SGQGMS Trigger: AGACATCCCCTGTCCAGAGCAAATCCCCAACCCTGA...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAAGAAGGCGAAGGAGATaGGGCAGAAAGTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGIRRRRR*GRKCLF Trigger: GAAGAGACACTTTCTGCCCCATCTCCTTCGCCTTCT...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTCACACAGAACTTGGTTaGGCACTTGCAGGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QGSEMNFKAIFQVNVNISHTELG*ALAGRI Trigger: GATCCTCCCTGCAAGTGCCCAACCAAGTTCTGTGTG...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAGCCACTGGCTGTACTaGTGCATATCAGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKAIFQVNVNISEVSFPVSHWLY*CISDRP Trigger: TGGCCTGTCTGATATGCATCAGTACAGCCAGTGGCT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000208711.2 |
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| CDS-3UTR TCA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGACAGTTGCTGCAAGCTaGCAGAGCAAGGCACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KAIFQVNVNISEVSFPVKTVAAS*QSKAPL Trigger: TAATGGTGCCTTGCTCTGTCAGCTTGCAGCAACTGT...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACTTTCTCCTGCACAGTTaGTGCAAGCTGACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYFLLHS*CKLTEQ Trigger: TTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAA...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR GCA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAAGGGTGCACTGGCTTTaGAAGGAATCTTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWTISCCLLIQNSSVLGIRVHWL*KESSSV Trigger: CACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCT...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR GCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCAAAGGAGCCCGAGGGTaGACTGGCTTTGCAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGKGARG*TGFARN Trigger: ATTCCTTGCAAAGCCAGTGCACCCTCGGGCTCCTTT...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTTCTCGGGGCTGCTTATaGAGAACCAGGCCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKAIFQVNVNISEVSFPVSRGCL*RTRPSD Trigger: ATCTGAAGGCCTGGTTCTGCATAAGCAGCCCCGAGA...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCCATGTCCTTCAGGGTTaGGGATTTGCTCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGHVLQG*GFALDR Trigger: CCTGTCCAGAGCAAATCCCCAACCCTGAAGGACATG...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR GCA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTAGGGTGCACTGGCTTTaGAAGGAATCTTCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSEMNFKAIFQVNVNISRVHWL*KESSSV Trigger: CACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCT...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTACTTGGTTGGGCACTTaGAGGGAGGATCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKAIFQVNVNISEVSFPVTWLGT*REDLQR Trigger: TCTCTGAAGATCCTCCCTGCAAGTGCCCAACCAAGT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CCA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAGAAGGCGAAGGAGATaGGGCAGAAAGTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKAIFQVNVNISEVSFPVRRRRR*GRKCLF Trigger: GAAGAGACACTTTCTGCCCCATCTCCTTCGCCTTCT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCAGAAGGCGAAGGAGATaGGGCAGAAAGTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGRRRRR*GRKCLF Trigger: GAAGAGACACTTTCTGCCCCATCTCCTTCGCCTTCT...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTTTCTCCTGCACAGTTaGTGCAAGCTGACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQVNVNISEVSFPVKYYGFLLHS*CKLTEQ Trigger: TTGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAA...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| 3UTR CAA 72 bp | ACTACATTGACTACACTGAAGAATGGACACAGGCCATaGCATGAGTCCTCTTTCAGAGATCAGTTTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTLKNGHRP*HESSFRDQFHL Trigger: TAAATGAAACTGATCTCTGAAAGAGGACTCATGCAATGGCCTGTGTCCATTCTTCAGTGTAGTCAATGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| CDS TCA 90 bp | GGCAGCAAATTAGCTTCATGTCTGCTGGCCAGCCACTGGCTGTACTaGTGCATATCAGACAGGCCAGGTCCGCTGCGAACCTTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSKLASCLLASHWLY*CISDRPGPLRTLGL Trigger: GAGCCCCAAGGTTCGCAGCGGACCTGGCCTGTCTGATATGCATCAGTACAGCCAGTGGCTGGCCAGCAGACATGAAGCTAATTTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000129604.8 ENSMUST00000145049.2 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCCGCTCCACACAGAACTaGGTTGGGCACTTGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCRSTQN*VGHLQG Trigger: TCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCG...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGCACTCGGTATCGACCTaGAGAGAGCCGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: ISVDNILLFIDTKQLCPGHSVST*REPLHT Trigger: TGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTG...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCTTCAGGGTTGGGGATTaGCTCTGGACAGGGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCFRVGD*LWTGDV Trigger: GACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAA...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTGGTTTGGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTTTCAGGGTTGGGGATTaGCTCTGGACAGGGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGWFGQGSEMNFKAIFQVFRVGD*LWTGDV Trigger: GACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAA...AACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACCAAACCAACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCATTTCTCCTGCACAGTaGCTGCAAGCTGACAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCISPAQ*LQADRA Trigger: TGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAAT...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCGAGGGTGCACTGGCTTaGCAAGGAATCTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCEGALA*QGIFFS Trigger: ACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCTC...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGCGCTCCACACAGAACTaGGTTGGGCACTTGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAIFQVNVNISEVSFPVKRSTQN*VGHLQG Trigger: TCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCG...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYRVLAG*LASILS Trigger: AGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCT...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACCACCAGGATAGGAAATaGGCTGTGTTGTCTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYHQDRK*AVLSRA Trigger: TGCCCGAGACAACACAGCCAATTTCCTATCCTGGTG...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCCGCTCCACACAGAACTaGGTTGGGCACTTGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQVNVNISEVSFPVKYYGRSTQN*VGHLQG Trigger: TCCCTGCAAGTGCCCAACCAAGTTCTGTGTGGAGCG...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCCACTCGGTATCGACCTaGAGAGAGCCGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: FQVNVNISEVSFPVKYYGHSVST*REPLHT Trigger: TGTGTGGAGCGGCTCTCTCAAGGTCGATACCGAGTG...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCCGGACCATCACATGCTaGTTGTGCAGCATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GQGSEMNFKAIFQVNVNIRTITC*LCSILM Trigger: CATCAGGATGCTGCACAACAAGCATGTGATGGTCCG...GATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS TCA 90 bp | TTGCTGCAAGCTGACAGAGCAAGGCACCATTATCCAACTTCTCCATaGAGGTTTCTGCTGTTATCTCTTTCCCTAATAGATTGGTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LLQADRARHHYPTSP*RFLLLSLSLIDWLT Trigger: GGTTAACCAATCTATTAGGGAAAGAGATAACAGCAGAAACCTTCATGGAGAAGTTGGATAATGGTGCCTTGCTCTGTCAGCTTGCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000145049.2 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KSVWTISCCLLIQNSSVLRVLAG*LASILS Trigger: AGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCT...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAGAGGGTGCACTGGCTTaGCAAGGAATCTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VWTISCCLLIQNSSVLGIEGALA*QGIFFS Trigger: ACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCTC...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGCACCAGGATAGGAAATaGGCTGTGTTGTCTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVWTISCCLLIQNSSVLHQDRK*AVLSRA Trigger: TGCCCGAGACAACACAGCCAATTTCCTATCCTGGTG...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGCGGACCATCACATGCTaGTTGTGCAGCATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KAIFQVNVNISEVSFPVKRTITC*LCSILM Trigger: CATCAGGATGCTGCACAACAAGCATGTGATGGTCCG...CTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | CTACATGAATTTTACTTCATGAGACAGCATAGCAGAATAGGACTAACTAAAGCTTTCAGGGTTGGGGATTaGCTCTGGACAGGGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHEFYFMRQHSRIGLTKAFRVGD*LWTGDV Trigger: GACATCCCCTGTCCAGAGCAAATCCCCAACCCTGAA...AGCTTTAGTTAGTCCTATTCTGCTATGCTGTCTCATGAAGTAAAATTCATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | GAGCAAGGCACCATTATCCAACTTCTCCATGAAGGTTTCTGCTGTTATCTCTTTCTGATGCCTAATAGATaGGTTAACCACAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQGTIIQLLHEGFCCYLFLMPNR*VNHKAK Trigger: CTTGGCCTTGTGGTTAACCAATCTATTAGGCATCAG...AAAGAGATAACAGCAGAAACCTTCATGGAGAAGTTGGATAATGGTGCCTTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129604.8 |
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| CDS-3UTR CAA 90 bp | AAGGTTGATGAACATTTGACTGTGCAGTCCACACATCAGAATGTGAATGACTGCGCATCCATACTCTCTTaGAATTTCTCCTGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KVDEHLTVQSTHQNVNDCASILS*NFSCTV Trigger: AACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGC...GCAGTCATTCACATTCTGATGTGTGGACTGCACAGTCAAATGTTCATCAACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAGGGTCTTGGCAGGCTaGTTGGCATCCATACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FKAIFQVNVNISEVSFPVRVLAG*LASILS Trigger: AGAGAGTATGGATGCCAACAAGCCTGCCAAGACCCT...AACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAAGATTGCCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGAGGGTGCACTGGCTTaGCAAGGAATCTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KSVWTISCCLLIQNSSVLEGALA*QGIFFS Trigger: ACTGAAGAAGATTCCTTGCAAAGCCAGTGCACCCTC...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCCACCAGGATAGGAAATaGGCTGTGTTGTCTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FQVNVNISEVSFPVKYYGHQDRK*AVLSRA Trigger: TGCCCGAGACAACACAGCCAATTTCCTATCCTGGTG...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTCTTTCCTGAAGACTTaGATGAAGGAGAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISVDNILLFIDTKQLCPGSFLKT*MKEKAK Trigger: CTTCGCCTTCTCCTTCATCAAAGTCTTCAGGAAAGA...CCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGGGTATAACCATCACATGCTTGTaGTGCAGCATCCTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VWTISCCLLIQNSSVLGITITCL*CSILMK Trigger: CTTCATCAGGATGCTGCACAACAAGCATGTGATGGT...TATACCCAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGTTAATGTAAACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCCGGACCATCACATGCTaGTTGTGCAGCATCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FQVNVNISEVSFPVKYYGRTITC*LCSILM Trigger: CATCAGGATGCTGCACAACAAGCATGTGATGGTCCG...GCCATAATACTTAACTGGAAAGGACACTTCAGAGATGTTTACATTAACTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | CTACATGAATTTTACTTCATGAGACAGCATAGCAGAATAGGACTAACTAAAGCTATTTCTCCTGCACAGTaGCTGCAAGCTGACAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: LHEFYFMRQHSRIGLTKAISPAQ*LQADRA Trigger: TGCTCTGTCAGCTTGCAGCAACTGTGCAGGAGAAAT...AGCTTTAGTTAGTCCTATTCTGCTATGCTGTCTCATGAAGTAAAATTCATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGACCATCACATGCTTGTaGTGCAGCATCCTGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: KSVWTISCCLLIQNSSVLTITCL*CSILMK Trigger: CTTCATCAGGATGCTGCACAACAAGCATGTGATGGT...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | ACATCTCTGAAGTGTCCTTTCCAGTTAAGTATTATGGCTGAGAAAACTCTCTACTCTTTCCCTAATAGATaGGTTAACCACAAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TSLKCPFQLSIMAEKTLYSFPNR*VNHKAK Trigger: CTTGGCCTTGTGGTTAACCAATCTATTAGGGAAAGA...GTAGAGAGTTTTCTCAGCCATAATACTTAACTGGAAAGGACACTTCAGAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | CAGGGATCAGAGATGAACTTTAAGGCAATCTTCCAAGTTAATGTAAACATCTCTTCTTTCCCTAATAGATaGGTTAACCACAAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QGSEMNFKAIFQVNVNISSFPNR*VNHKAK Trigger: CTTGGCCTTGTGGTTAACCAATCTATTAGGGAAAGA...AGAGATGTTTACATTAACTTGGAAGATTGCCTTAAAGTTCATCTCTGATCCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | AAATCAGTGTGGACAATATCTTGCTGTTTATTGATACAAAACAGCTCTGTCCTGTCTTTCCCTAATAGATaGGTTAACCACAAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KSVWTISCCLLIQNSSVLSFPNR*VNHKAK Trigger: CTTGGCCTTGTGGTTAACCAATCTATTAGGGAAAGA...CAGGACAGAGCTGTTTTGTATCAATAAACAGCAAGATATTGTCCACACTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | CTACATGAATTTTACTTCATGAGACAGCATAGCAGAATAGGACTAACTAAAGCTTCTTTCCTGAAGACTTaGATGAAGGAGAAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: LHEFYFMRQHSRIGLTKASFLKT*MKEKAK Trigger: CTTCGCCTTCTCCTTCATCAAAGTCTTCAGGAAAGA...AGCTTTAGTTAGTCCTATTCTGCTATGCTGTCTCATGAAGTAAAATTCATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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| CDS-3UTR CAA 90 bp | CTACATGAATTTTACTTCATGAGACAGCATAGCAGAATAGGACTAACTAAAGCTGCATCCATACTCTCTTaGAATTTCTCCTGCACAGTT | + |
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Preference number: 5 (lower is better) Translates to: LHEFYFMRQHSRIGLTKAASILS*NFSCTV Trigger: AACTGTGCAGGAGAAATTCAAAGAGAGTATGGATGC...AGCTTTAGTTAGTCCTATTCTGCTATGCTGTCTCATGAAGTAAAATTCATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051912.13 ENSMUST00000107591.9 ENSMUST00000208711.2 |
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