Pregenerated sensors for GARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029777Ensembl transcript IDs: ENSMUST00000003572.10
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCCTCCGCGCTGTCCATaGTGCTCCGGGAGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVPPRCP*CSGRRR Trigger: CCGCCGCCTCCCGGAGCAGCATGGACAGCGCGGAGG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACCGCGCTGTCCATGCTaGTCCGGGAGGCGGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVPRCPC*SGRRRA Trigger: AGCCCGCCGCCTCCCGGAGCAGCATGGACAGCGCGG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGCTGCGCGGGAGCGCTaGGGAGCCGCTGAGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLAARER*GAAETR Trigger: CCGCGTCTCAGCGGCTCCTCAGCGCTCCCGCGCAGC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCCACGGCGCCCTTGTTaGGCTCAAACTGTACAACGT | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVPRRPC*AQTVQR Trigger: ACGTTGTACAGTTTGAGCCCAACAAGGGCGCCGTGG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGATCGCGGACCACATTaGGCAGCTCAGAGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVDRGPH*AAQRPL Trigger: CAGAGGTCTCTGAGCTGCCCAATGTGGTCCGCGATC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACAAAGAGTGGGTACCTaGCCTCCACATCAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVQRVGT*PPHQPR Trigger: CCTGGGCTGATGTGGAGGCCAGGTACCCACTCTTTG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTATCGGTCCCTCAGAGTTaGAGTGTGGGGCGTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVSVPQS*SVGRLV Trigger: AACAAGACGCCCCACACTGCAACTCTGAGGGACCGA...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCAGTCCAGACCGAGGTaGGATCTCATTTCTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVQSRPR*DLISEG Trigger: TCCTTCAGAAATGAGATCTCACCTCGGTCTGGACTG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGGAGGGGACAGGTCATTaGCAGTGGTGGGAGATTTTA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVEGTGH*QWWEIL Trigger: TAAAATCTCCCACCACTGGCAATGACCTGTCCCCTC...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCAGCTCAGAGACCTCTaGCCTTATCTGTCTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVQLRDL*PYLSHG Trigger: TCCATGAGACAGATAAGGGCAGAGGTCTCTGAGCTG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAAGCCATAGGACGTTTTaGACTCGGCATCCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVSHRTF*TRHPSS Trigger: ACTGCTGGGATGCCGAGTCCAAAACGTCCTATGGCT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACCCTTATCTGTCTCATaGAGTCTCGGTCCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVPLSVS*SLGPSE Trigger: CTCTGAGGGACCGAGACTCCATGAGACAGATAAGGG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTATTGCCCTTCAAAGAGTaGGTACCTGGCCTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVLPFKE*VPGLHI Trigger: GATGTGGAGGCCAGGTACCCACTCTTTGAAGGGCAA...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGGACCTGGGCTTTTGCTaGGTACAAATAAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVDLGFC*VQIKAE Trigger: CTCTGCCTTTATTTGTACTCAGCAAAAGCCCAGGTC...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCAGCAGCTCCATCTCTaGAATGTAGCACTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVQQLHL*NVALIT Trigger: TGTGATGAGTGCTACATTTCAGAGATGGAGCTGCTG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAAGGATCTGCTCCTCTTaGATAAAGTGCTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVRICSS*IKCCLQ Trigger: CTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGTCCCTGTGCAGTTTCTaGTCTCAGATATCCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVSLCSF*SQISRH Trigger: ATGCCTGGATATCTGAGACCAGAAACTGCACAGGGA...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCCACACTTTGGAACTTaGGATGGTCTTTCTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVPHFGT*DGLSQW Trigger: CCACTGAGAAAGACCATCCCAAGTTCCAAAGTGTGG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAAGGTCGGCCACACTTTaGAACTTGGGATGGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVRSATL*NLGWSF Trigger: GAAAGACCATCCCAAGTTCCAAAGTGTGGCCGACCT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGGACTGTCCAGTGACCTaGGCTTTTGCTGAGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVDCPVT*AFAEYK Trigger: TTTGTACTCAGCAAAAGCCCAGGTCACTGGACAGTC...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACTAGTGGAACTTTGGTaGCTCGAGCATGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVLVELW*LEHDRR Trigger: TCTCCTGTCATGCTCGAGCCACCAAAGTTCCACTAG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGACACTTTCCATCTCTaGCTTCTTCTCAGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVDTFHL*LLLSRA Trigger: TGCTCTGCTGAGAAGAAGTCAGAGATGGAAAGTGTC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTATTCCTCCAGGCCCAATaGAGGTCTGGAACATTAAGT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVFLQAQ*RSGTLS Trigger: ACTTAATGTTCCAGACCTTCATTGGGCCTGGAGGAA...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACCACAGCAGGGAAACTaGAGAACGTTCTCTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVPQQGN*RTFSVH Trigger: ATGAACAGAGAACGTTCTTCAGTTTCCCTGCTGTGG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAATGTCATCTTTGGGCTaGAATGCCAGCTCCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVMSSLG*NASSFA Trigger: AGCAAAGGAGCTGGCATTGCAGCCCAAAGATGACAT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGTCAATCTCCAGGATCTaGTCCTCTTGGATAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVSISRI*SSWIKC Trigger: GCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGA...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGTCATTCTCCATATGCTaGCGGAAGCGGAGTTTATCA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVSFSIC*RKRSLS Trigger: TGATAAACTCCGCTTCCGGCAGCATATGGAGAATGA...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGATCTCATTCTCCATATaGTGCCGGAAGCGGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVISFSI*CRKRSL Trigger: TAAACTCCGCTTCCGGCAGCATATGGAGAATGAGAT...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGTGCTGCCTCCAGGCCTaGATGATATTGTTCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVCCLQA*MILFFK Trigger: TTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCA...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGAATGGCATAAACTCTTaGTTCTGGCTCAGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVNGINS*FWLSGR Trigger: CCTTCCACTGAGCCAGAACCAAGAGTTTATGCCATT...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCAGGAAAATTCCCTGTaGAGTTTCTGGTCTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVQENSL*SFWSQI Trigger: TATCTGAGACCAGAAACTGCACAGGGAATTTTCCTG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAAAGGAGTTTCCAATCTaGGCAGCAGCAAAAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVKEFPI*AAAKGN Trigger: ATTGCCTTTTGCTGCTGCCCAGATTGGAAACTCCTT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTACTTTGGAACTTGGGATaGTCTTTCTCAGTGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVLWNLG*SFSVGS Trigger: AGATCCCACTGAGAAAGACCATCCCAAGTTCCAAAG...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTATCACGTCCTTCACCATaGAGTCAGCAAATTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVSRPSP*SQQICL Trigger: TAGACAAATTTGCTGACTTCATGGTGAAGGACGTGA...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGAGCAGACTGTCCAGTaGCCTGGGCTTTTGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLEQTVQ*PGLLLS Trigger: ACTCAGCAAAAGCCCAGGTCACTGGACAGTCTGCTC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGGAATCTCTTCACACTaGCCATGTCTTTCGTTAACT | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVGISSH*PCLSLT Trigger: AGTTAACGAAAGACATGGTCAGTGTGAAGAGATTCC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGAATCTCATCAGTTCTTaGATAGCGCCTTCCAATAGA | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVNLISS*IAPSNR Trigger: TCTATTGGAAGGCGCTATGCAAGAACTGATGAGATT...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGACAGGTCATTGCCAGTaGTGGGAGATTTTACATTAT | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVTGHCQ*WEILHY Trigger: ATAATGTAAAATCTCCCACCACTGGCAATGACCTGT...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGATGGTCTTTCTCAGTaGGATCTACAAAGTGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QAATEEKPSLDAVTMLCVDGLSQ*DLQSAQ Trigger: TTGAGCACTTTGTAGATCCCACTGAGAAAGACCATC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGAAACTGGCTCAGGGGTaGGCATGGTGCAGTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLKLAQG*AWCSQS Trigger: AGATTGACTGCACCATGCTCACCCCTGAGCCAGTTT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGAGTCATCGACTTTATaGGACACGCCGTTCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLESSTL*DTPFLV Trigger: GACCAGGAACGGCGTGTCTCATAAAGTCGATGACTC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGCAATGCCAGCTCCTTTaGTTCCAGAACCCTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLQCQLL*FQNPLP Trigger: CGGAAGAGGGTTCTGGAAGCAAAGGAGCTGGCATTG...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCGTATCTTCCATTTTTaGTCTATCTACGATGTCATC | + |
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Preference number: 4 (lower is better) Translates to: AATEEKPSLDAVTMLCVVRIFHF*SIYDVI Trigger: GATGACATCGTAGATAGAGCAAAAATGGAAGATACG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR TCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGATATTCCAACCTTCGTaGGGTAGAGGTAGATGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLIFQPS*GRGRCG Trigger: GCCGCATCTACCTCTACCTCACGAAGGTTGGAATAT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGATCTTTGGGCTGCAATaGCAGCTCCTTTGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLIFGLQ*QLLCFQ Trigger: CTGGAAGCAAAGGAGCTGGCATTGCAGCCCAAAGAT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGTTCTTGCCAGTCTCTTaGCCTTCAAAGAGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLFLPVS*PSKSGY Trigger: GTACCCACTCTTTGAAGGGCAAGAGACTGGCAAGAA...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGAAAGTGCTCAATCTCTaGCATTGTAAACTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLKVLNL*HCKLPD Trigger: GTCAGGGAGTTTACAATGGCAGAGATTGAGCACTTT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR GCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGTGGGATCTACAAAGTaGTCAATCTCTGCCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLVGSTK*SISAIV Trigger: TACAATGGCAGAGATTGAGCACTTTGTAGATCCCAC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGTCTCCCTCTCGGACATaGAATGTATGTTCCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLSPSRT*NVCSNM Trigger: CATATTGGAACATACATTCCATGTCCGAGAGGGAGA...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGTTGGTTCTGGCTCAGTaGAAGGACAGAACATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLLVLAQ*KDRTFE Trigger: TTCAAATGTTCTGTCCTTCCACTGAGCCAGAACCAA...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGCAAATTTGTCTACGTaGCCAGAGGTCTTTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLANLST*PEVFKT Trigger: AGTTTTAAAGACCTCTGGCCACGTAGACAAATTTGC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CCA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGGTCATTGCCAGTGGTaGGAGATTTTACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSGHDELFISTMVISCQLGHCQW*EILHYS Trigger: ACTATAATGTAAAATCTCCCACCACTGGCAATGACC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | CTGCTCCGGGAGGCGGCGGGCTGCGCGGGAGCGCTGAGGAGCCGCTaGGACGCGGACGCTGCGACCACTCGGGGCGGCGACAGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLREAAGCAGALRSR*DADAATTRGGDRSG Trigger: GCCGCTCCTGTCGCCGCCCCGAGTGGTCGCAGCGTCCGCGTCTCAGCGGCTCCTCAGCGCTCCCGCGCAGCCCGCCGCCTCCCGGAGCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | GCTGCAATGCCAGCTCCTTTGCTTCCAGAACCCTCTTCCGGGCCTTaGGCTCAGCTACTGCTCTGTCCACATCCACTTGTGGGGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AAMPAPLLPEPSSGP*AQLLLCPHPLVGLY Trigger: ATAAAGCCCCACAAGTGGATGTGGACAGAGCAGTAGCTGAGCTCAAGGCCCGGAAGAGGGTTCTGGAAGCAAAGGAGCTGGCATTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | CAGACGCATCTTCCGAGCAGACTGTCCAGTGACCTGGGCTTTTGCTaGGTACAAATAAAGGCAGAGGTCGGCCACACTTTGGAACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTHLPSRLSSDLGFC*VQIKAEVGHTLELG Trigger: CCCAAGTTCCAAAGTGTGGCCGACCTCTGCCTTTATTTGTACTCAGCAAAAGCCCAGGTCACTGGACAGTCTGCTCGGAAGATGCGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | GTTCAACAGCATCTCCCAGACGCATCTTCCGAGCAGACTGTCCAGTaGCCTGGGCTTTTGCTGAGTACAAATAAAGGCAGAGGTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VQQHLPDASSEQTVQ*PGLLLSTNKGRGRP Trigger: TGGCCGACCTCTGCCTTTATTTGTACTCAGCAAAAGCCCAGGTCACTGGACAGTCTGCTCGGAAGATGCGTCTGGGAGATGCTGTTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGCAATGCCAGCTCCTTaGCTTCCAGAACCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAATEEKPSLDAVTMLCVAMPAP*LPEPSS Trigger: GGAAGAGGGTTCTGGAAGCAAAGGAGCTGGCATTGC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGCAGGATCTGCTCCTCTaGGATAAAGTGCTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AATEEKPSLDAVTMLCVVQDLLL*DKVLPP Trigger: TGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTG...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 90 bp | AAAACTGGCTCAGGGGTGAGCATGGTGCAGTCAATCTCCAGGATCTaGTCCTCTTGGATAAAGTGCTGCCTCCAGGCCTGGATGATATTG | + |
|
Preference number: 5 (lower is better) Translates to: KTGSGVSMVQSISRI*SSWIKCCLQAWMIL Trigger: CAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGACTGCACCATGCTCACCCCTGAGCCAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | TCAGCAGCAGCTCCATCTCTGAAATGTAGCACTCATCACAGGCGCTaGGATACTCCAGCACTAGCTTTGCATCCTTCTTGTACGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAAAPSLKCSTHHRR*DTPALALHPSCTPC Trigger: GCAAGGCGTACAAGAAGGATGCAAAGCTAGTGCTGGAGTATCTCAGCGCCTGTGATGAGTGCTACATTTCAGAGATGGAGCTGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 90 bp | ATCTCCAGGATCTGCTCCTCTTGGATAAAGTGCTGCCTCCAGGCCTaGATGATATTGTTCTTCAAAGCACATCCTACCGGCCCGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISRICSSWIKCCLQA*MILFFKAHPTGPKS Trigger: TGACTTCGGGCCGGTAGGATGTGCTTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 90 bp | TTTTGGGTTCTTTCAGAGGTTTCTCAGCTACTAGTGGAACTTTGGTaGCTCGAGCATGACAGGAGAGGTCGTAGCAGGAACGGTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FWVLSEVSQLLVELW*LEHDRRGRSRNGQH Trigger: GTGCTGACCGTTCCTGCTACGACCTCTCCTGTCATGCTCGAGCCACCAAAGTTCCACTAGTAGCTGAGAAACCTCTGAAAGAACCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 90 bp | CTGTTTTGGGTTCTTTCAGAGGTTTCTCAGCTACTAGTGGAACTTTaGTGGCTCGAGCATGACAGGAGAGGTCGTAGCAGGAACGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFWVLSEVSQLLVEL*WLEHDRRGRSRNGQ Trigger: CTGACCGTTCCTGCTACGACCTCTCCTGTCATGCTCGAGCCACCAAAGTTCCACTAGTAGCTGAGAAACCTCTGAAAGAACCCAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGCCACACTTTGGAACTaGGGATGGTCTTTCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QAATEEKPSLDAVTMLCVATLWN*GWSFSV Trigger: CACTGAGAAAGACCATCCCAAGTTCCAAAGTGTGGC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAACTCCAGCACTAGCTTaGCATCCTTCTTGTACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QAATEEKPSLDAVTMLCVTPALA*HPSCTP Trigger: AGGCGTACAAGAAGGATGCAAAGCTAGTGCTGGAGT...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGGGAAGGACAGAACATTaGAATGGAGCAACCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AATEEKPSLDAVTMLCVVGRTEH*NGATTA Trigger: TGCTGTGGTTGCTCCATTCAAATGTTCTGTCCTTCC...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGCAGTGTGGGGCGTCTaGTTCACTGTATCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QAATEEKPSLDAVTMLCVAVWGV*FTVSKS Trigger: TGACTTTGATACAGTGAACAAGACGCCCCACACTGC...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | GGTGGTCTGCTCGGAAGCACTCTCCGTTCTTCACGTCCTTCACCATaGAGTCAGCAAATTTGTCTACGTGGCCAGAGGTCTTTAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLLGSTLRSSRPSP*SQQICLRGQRSLKL Trigger: CAGTTTTAAAGACCTCTGGCCACGTAGACAAATTTGCTGACTTCATGGTGAAGGACGTGAAGAACGGAGAGTGCTTCCGAGCAGACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | CTCTGCCATTGTAAACTCCCTGACTCGGATCAGTCCAGACCGAGGTaGGATCTCATTTCTGAAGGAGTTTCCAATCTGGGCAGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCHCKLPDSDQSRPR*DLISEGVSNLGSSK Trigger: TTTGCTGCTGCCCAGATTGGAAACTCCTTCAGAAATGAGATCTCACCTCGGTCTGGACTGATCCGAGTCAGGGAGTTTACAATGGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 90 bp | GACCTCTGCCCTTATCTGTCTCATGGAGTCTCGGTCCCTCAGAGTTaGAGTGTGGGGCGTCTTGTTCACTGTATCAAAGTCAATAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DLCPYLSHGVSVPQS*SVGRLVHCIKVNSD Trigger: ATCACTATTGACTTTGATACAGTGAACAAGACGCCCCACACTGCAACTCTGAGGGACCGAGACTCCATGAGACAGATAAGGGCAGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 90 bp | TCAGGGGTGAGCATGGTGCAGTCAATCTCCAGGATCTGCTCCTCTTaGATAAAGTGCTGCCTCCAGGCCTGGATGATATTGTTCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGVSMVQSISRICSS*IKCCLQAWMILFFK Trigger: TTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGACTGCACCATGCTCACCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGCTCGGTCCCTCAGAGTaGCAGTGTGGGGCGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLLGPSE*QCGASC Trigger: ACAAGACGCCCCACACTGCAACTCTGAGGGACCGAG...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | CAAGCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTATCTGTCCACATCCACTaGTGGGGCTTTATCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QAATEEKPSLDAVTMLCVSVHIH*WGFIFF Trigger: AAAGAAGATAAAGCCCCACAAGTGGATGTGGACAGA...TACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGGGCAATTTCCCTTGGTaGAATTCCAAAAGTCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AATEEKPSLDAVTMLCVVGNFPW*NSKSRL Trigger: CAAACGACTTTTGGAATTCAACCAAGGGAAATTGCC...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 90 bp | CATCTCCCTCTCGGACATGGAATGTATGTTCCAATATGGTATACATaGTCCTGCCCAAGCCAAAGGAGGGCTCAATTACACTCGGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: HLPLGHGMYVPIWYT*SCPSQRRAQLHSEQ Trigger: TTGTTCCGAGTGTAATTGAGCCCTCCTTTGGCTTGGGCAGGATCATGTATACCATATTGGAACATACATTCCATGTCCGAGAGGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 90 bp | ACACTTTGGAACTTGGGATGGTCTTTCTCAGTGGGATCTACAAAGTaGTCAATCTCTGCCATTGTAAACTCCCTGACTCGGATCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TLWNLGWSFSVGSTK*SISAIVNSLTRISP Trigger: TGGACTGATCCGAGTCAGGGAGTTTACAATGGCAGAGATTGAGCACTTTGTAGATCCCACTGAGAAAGACCATCCCAAGTTCCAAAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | GCAGCCACTGAGGAAAAACCGTCCCTGGATGCAGTCACAATGCTCTGTGTAGTGACGTATCTTCCATTTTaGCTCTATCTACGATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AATEEKPSLDAVTMLCVVTYLPF*LYLRCH Trigger: ATGACATCGTAGATAGAGCAAAAATGGAAGATACGT...CACTACACAGAGCATTGTGACTGCATCCAGGGACGGTTTTTCCTCAGTGGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGATGAAGTCAGCAAATTaGTCTACGTGGCCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLMKSAN*STWPEV Trigger: GACCTCTGGCCACGTAGACAAATTTGCTGACTTCAT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGCAGGCCTGGATGATATaGTTCTTCAAAGCACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLQAWMI*FFKAHP Trigger: AGGATGTGCTTTGAAGAACAATATCATCCAGGCCTG...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGATCCGCAAGTTCTTGTaGTCCATAGTTATCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLIRKFL*SIVIKL Trigger: CAGCTTGATAACTATGGACAACAAGAACTTGCGGAT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGAAGATCCGCAAGTTCTaGTTGTCCATAGTTATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLKIRKF*LSIVIK Trigger: CTTGATAACTATGGACAACAAGAACTTGCGGATCTT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGAAAAGGCAATTTCCCTaGGTTGAATTCCAAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLKRQFP*VEFQKS Trigger: CGACTTTTGGAATTCAACCAAGGGAAATTGCCTTTT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGACAACGTTAACTGTTTaGGGTTCTTTCAGAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLTTLTV*GSFRGF Trigger: GAAACCTCTGAAAGAACCCAAAACAGTTAACGTTGT...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS-3UTR CAA 90 bp | TGTAGTGGACATGATGAGTTATTTATTAGCACGATGGTCATAAGCTGCCAGCTGGCTTCGGATAATTCCTaGACAAATGGCATAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSGHDELFISTMVISCQLASDNS*TNGINS Trigger: AGAGTTTATGCCATTTGTCAAGGAATTATCCGAAGC...CAGCTGGCAGCTTATGACCATCGTGCTAATAAATAACTCATCATGTCCACTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS CAA 72 bp | AGTGGGTACCTGGCCTCCACATCAGCCCAGGTAATGTaGCCGTTGGCCAGATCGCGGACCACATTGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGYLASTSAQVM*PLARSRTTLGS Trigger: GCTGCCCAATGTGGTCCGCGATCTGGCCAACGGCAACATTACCTGGGCTGATGTGGAGGCCAGGTACCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | CCAGCTCCTTTGCTTCCAGAACCCTCTTCCGGGCCTTaGGCTCAGCTACTGCTCTGTCCACATCCACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPLLPEPSSGP*AQLLLCPHPLV Trigger: CACAAGTGGATGTGGACAGAGCAGTAGCTGAGCTCAAGGCCCGGAAGAGGGTTCTGGAAGCAAAGGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS CCA 72 bp | TTATCTTCTTTTAACTTCCGTACAAAGTCTCCCTGCTaGCGCACGGCTAGCCGCAGTGGGGCCAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSFNFRTKSPC*RTASRSGASSS Trigger: GGAGCTGCTGGCCCCACTGCGGCTAGCCGTGCGCCAGCAGGGAGACTTTGTACGGAAGTTAAAAGAAGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS TCA 72 bp | CTACGTGGCCAGAGGTCTTTAAAACTGGCTCAGGGGTaGGCATGGTGCAGTCAATCTCCAGGATCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRGQRSLKLAQG*AWCSQSPGSAP Trigger: AGGAGCAGATCCTGGAGATTGACTGCACCATGCTCACCCCTGAGCCAGTTTTAAAGACCTCTGGCCACGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS GCA 72 bp | ACTCCAGCACTAGCTTTGCATCCTTCTTGTACGCCTTaGCCACGGCGCCCTTGTTGGGCTCAAACTGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: TPALALHPSCTP*PRRPCWAQTVQ Trigger: TTGTACAGTTTGAGCCCAACAAGGGCGCCGTGGGCAAGGCGTACAAGAAGGATGCAAAGCTAGTGCTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS TCA 72 bp | CTTCCGAGCAGACTGTCCAGTGACCTGGGCTTTTGCTaGGTACAAATAAAGGCAGAGGTCGGCCACACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPSRLSSDLGFC*VQIKAEVGHTL Trigger: CAAAGTGTGGCCGACCTCTGCCTTTATTTGTACTCAGCAAAAGCCCAGGTCACTGGACAGTCTGCTCGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS CAA 72 bp | GCATCCTTCTTGTACGCCTTGCCCACGGCGCCCTTGTaGGGCTCAAACTGTACAACGTTAACTGTTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASFLYALPTAPL*GSNCTTLTVLG Trigger: ACCCAAAACAGTTAACGTTGTACAGTTTGAGCCCAACAAGGGCGCCGTGGGCAAGGCGTACAAGAAGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
||
| CDS CAA 90 bp | CTCAGGGGTGAGCATGGTGCAGTCAATCTCCAGGATCTGCTCCTCTaGGATAAAGTGCTGCCTCCAGGCCTGGATGATATTGTTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LRGEHGAVNLQDLLL*DKVLPPGLDDIVLQ Trigger: TTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGACTGCACCATGCTCACCCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | CTCGGAAGCACTCTCCGTTCTTCACGTCCTTCACCATaGAGTCAGCAAATTTGTCTACGTGGCCAGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LGSTLRSSRPSP*SQQICLRGQRS Trigger: AGACCTCTGGCCACGTAGACAAATTTGCTGACTTCATGGTGAAGGACGTGAAGAACGGAGAGTGCTTCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | CTCGGATCAGTCCAGACCGAGGTGAGATCTCATTTCTaGAGGAGTTTCCAATCTGGGCAGCAGCAAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGSVQTEVRSHF*RSFQSGQQQKA Trigger: TGCCTTTTGCTGCTGCCCAGATTGGAAACTCCTTCAGAAATGAGATCTCACCTCGGTCTGGACTGATCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | CATCTCCCAGACGCATCTTCCGAGCAGACTGTCCAGTaGCCTGGGCTTTTGCTGAGTACAAATAAAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLPDASSEQTVQ*PGLLLSTNKGR Trigger: TCTGCCTTTATTTGTACTCAGCAAAAGCCCAGGTCACTGGACAGTCTGCTCGGAAGATGCGTCTGGGAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 72 bp | CCTTATCTGTCTCATGGAGTCTCGGTCCCTCAGAGTTaGAGTGTGGGGCGTCTTGTTCACTGTATCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PYLSHGVSVPQS*SVGRLVHCIKV Trigger: GACTTTGATACAGTGAACAAGACGCCCCACACTGCAACTCTGAGGGACCGAGACTCCATGAGACAGATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 72 bp | AGCATGGTGCAGTCAATCTCCAGGATCTGCTCCTCTTaGATAAAGTGCTGCCTCCAGGCCTGGATGATATTG | + |
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Preference number: 6 (lower is better) Translates to: SMVQSISRICSS*IKCCLQAWMIL Trigger: CAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGACTGCACCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 72 bp | CTTTCAGAGGTTTCTCAGCTACTAGTGGAACTTTGGTaGCTCGAGCATGACAGGAGAGGTCGTAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LSEVSQLLVELW*LEHDRRGRSRN Trigger: GTTCCTGCTACGACCTCTCCTGTCATGCTCGAGCCACCAAAGTTCCACTAGTAGCTGAGAAACCTCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 72 bp | GTTCTTTCAGAGGTTTCTCAGCTACTAGTGGAACTTTaGTGGCTCGAGCATGACAGGAGAGGTCGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLSEVSQLLVEL*WLEHDRRGRSR Trigger: CCTGCTACGACCTCTCCTGTCATGCTCGAGCCACCAAAGTTCCACTAGTAGCTGAGAAACCTCTGAAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | GAGCATGGTGCAGTCAATCTCCAGGATCTGCTCCTCTaGGATAAAGTGCTGCCTCCAGGCCTGGATGATATT | + |
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Preference number: 6 (lower is better) Translates to: EHGAVNLQDLLL*DKVLPPGLDDI Trigger: AATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGATCCTGGAGATTGACTGCACCATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | CCCTTATCTGTCTCATGGAGTCTCGGTCCCTCAGAGTaGCAGTGTGGGGCGTCTTGTTCACTGTATCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PLSVSWSLGPSE*QCGASCSLYQS Trigger: ACTTTGATACAGTGAACAAGACGCCCCACACTGCAACTCTGAGGGACCGAGACTCCATGAGACAGATAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 90 bp | AGCACTAGCTTTGCATCCTTCTTGTACGCCTTGCCCACGGCGCCCTaGTTGGGCTCAAACTGTACAACGTTAACTGTTTTGGGTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: STSFASFLYALPTAP*LGSNCTTLTVLGSF Trigger: GAAAGAACCCAAAACAGTTAACGTTGTACAGTTTGAGCCCAACAAGGGCGCCGTGGGCAAGGCGTACAAGAAGGATGCAAAGCTAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | TGTAAACTCCCTGACTCGGATCAGTCCAGACCGAGGTaGGATCTCATTTCTGAAGGAGTTTCCAATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CKLPDSDQSRPR*DLISEGVSNLG Trigger: GCCCAGATTGGAAACTCCTTCAGAAATGAGATCTCACCTCGGTCTGGACTGATCCGAGTCAGGGAGTTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 72 bp | ATCTGCTCCTCTTGGATAAAGTGCTGCCTCCAGGCCTaGATGATATTGTTCTTCAAAGCACATCCTACCGGC | + |
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Preference number: 6 (lower is better) Translates to: ICSSWIKCCLQA*MILFFKAHPTG Trigger: GCCGGTAGGATGTGCTTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | TCTTGGATAAAGTGCTGCCTCCAGGCCTGGATGATATaGTTCTTCAAAGCACATCCTACCGGCCCGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SWIKCCLQAWMI*FFKAHPTGPKS Trigger: TGACTTCGGGCCGGTAGGATGTGCTTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | TTTGCATCCTTCTTGTACGCCTTGCCCACGGCGCCCTaGTTGGGCTCAAACTGTACAACGTTAACTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FASFLYALPTAP*LGSNCTTLTVL Trigger: CAAAACAGTTAACGTTGTACAGTTTGAGCCCAACAAGGGCGCCGTGGGCAAGGCGTACAAGAAGGATGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 90 bp | ATCTGCTCCTCTTGGATAAAGTGCTGCCTCCAGGCCTGGATGATATaGTTCTTCAAAGCACATCCTACCGGCCCGAAGTCATACAATCCA | + |
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Preference number: 6 (lower is better) Translates to: ICSSWIKCCLQAWMI*FFKAHPTGPKSYNP Trigger: TGGATTGTATGACTTCGGGCCGGTAGGATGTGCTTTGAAGAACAATATCATCCAGGCCTGGAGGCAGCACTTTATCCAAGAGGAGCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 90 bp | ACTAGCTTTGCATCCTTCTTGTACGCCTTGCCCACGGCGCCCTTGTaGGGCTCAAACTGTACAACGTTAACTGTTTTGGGTTCTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSFASFLYALPTAPL*GSNCTTLTVLGSFR Trigger: TCTGAAAGAACCCAAAACAGTTAACGTTGTACAGTTTGAGCCCAACAAGGGCGCCGTGGGCAAGGCGTACAAGAAGGATGCAAAGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS TCA 72 bp | GCTCCATCTCTGAAATGTAGCACTCATCACAGGCGCTaGGATACTCCAGCACTAGCTTTGCATCCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: APSLKCSTHHRR*DTPALALHPSC Trigger: ACAAGAAGGATGCAAAGCTAGTGCTGGAGTATCTCAGCGCCTGTGATGAGTGCTACATTTCAGAGATGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 72 bp | GTCTTTCTCAGTGGGATCTACAAAGTGCTCAATCTCTaGCATTGTAAACTCCCTGACTCGGATCAGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VFLSGIYKVLNL*HCKLPDSDQSR Trigger: TCTGGACTGATCCGAGTCAGGGAGTTTACAATGGCAGAGATTGAGCACTTTGTAGATCCCACTGAGAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 72 bp | AACTTGGGATGGTCTTTCTCAGTGGGATCTACAAAGTaGTCAATCTCTGCCATTGTAAACTCCCTGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: NLGWSFSVGSTK*SISAIVNSLTR Trigger: CCGAGTCAGGGAGTTTACAATGGCAGAGATTGAGCACTTTGTAGATCCCACTGAGAAAGACCATCCCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | CCGTTCTTCACGTCCTTCACCATGAAGTCAGCAAATTaGTCTACGTGGCCAGAGGTCTTTAAAACTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PFFTSFTMKSAN*STWPEVFKTGS Trigger: TGAGCCAGTTTTAAAGACCTCTGGCCACGTAGACAAATTTGCTGACTTCATGGTGAAGGACGTGAAGAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CCA 72 bp | CGAGGTGAGATCTCATTTCTGAAGGAGTTTCCAATCTaGGCAGCAGCAAAAGGCAATTTCCCTTGGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RGEISFLKEFPI*AAAKGNFPWLN Trigger: ATTCAACCAAGGGAAATTGCCTTTTGCTGCTGCCCAGATTGGAAACTCCTTCAGAAATGAGATCTCACCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | GTATCTTCCATTTTTGCTCTATCTACGATGTCATCTTaGGGCTGCAATGCCAGCTCCTTTGCTTCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: VSSIFALSTMSS*GCNASSFASRT Trigger: GGTTCTGGAAGCAAAGGAGCTGGCATTGCAGCCCAAAGATGACATCGTAGATAGAGCAAAAATGGAAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 90 bp | GGTGGGAGATTTTACATTATAGTTCACAAAAAGATCCGCAAGTTCTaGTTGTCCATAGTTATCAAGCTGGGCCAAGACACTTTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: GGRFYIIVHKKIRKF*LSIVIKLGQDTFHL Trigger: GAGATGGAAAGTGTCTTGGCCCAGCTTGATAACTATGGACAACAAGAACTTGCGGATCTTTTTGTGAACTATAATGTAAAATCTCCCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS GCA 72 bp | TTCCAAAAGTCGTTTGAAATTCAGGAAAATTCCCTGTaGAGTTTCTGGTCTCAGATATCCAGGCATATTTCC | + |
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Preference number: 6 (lower is better) Translates to: FQKSFEIQENSL*SFWSQISRHIS Trigger: GGAAATATGCCTGGATATCTGAGACCAGAAACTGCACAGGGAATTTTCCTGAATTTCAAACGACTTTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | TACATTATAGTTCACAAAAAGATCCGCAAGTTCTTGTaGTCCATAGTTATCAAGCTGGGCCAAGACACTTTC | + |
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Preference number: 6 (lower is better) Translates to: YIIVHKKIRKFL*SIVIKLGQDTF Trigger: GAAAGTGTCTTGGCCCAGCTTGATAACTATGGACAACAAGAACTTGCGGATCTTTTTGTGAACTATAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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| CDS CAA 72 bp | TTTTACATTATAGTTCACAAAAAGATCCGCAAGTTCTaGTTGTCCATAGTTATCAAGCTGGGCCAAGACACT | + |
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Preference number: 6 (lower is better) Translates to: FYIIVHKKIRKF*LSIVIKLGQDT Trigger: AGTGTCTTGGCCCAGCTTGATAACTATGGACAACAAGAACTTGCGGATCTTTTTGTGAACTATAATGTAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003572.10 |
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