Pregenerated sensors for GAPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046006Ensembl transcript IDs: ENSMUST00000058806.7, ENSMUST00000224534.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAAGTCACACCGTGGAGGAGCAGAGACAGGGACTTGGTAGCTTTGTGATGACACACTCGGAGGCCTGGTaGTGGGTTTTCCTCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PSHTVEEQRQGLGSFVMTHSEAW*WVFLQQ Trigger: TTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTG...TGTCATCACAAAGCTACCAAGTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR GCA 90 bp | GGAACTCAGAAGACCAGACTAGAGATGTGGCTCAGGAGTTTACCACTTACCTGGGACCTGCTAGGAGACTaGAATAGTGCTGAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GTQKTRLEMWLRSLPLTWDLLGD*NSAEPQ Trigger: TTGAGGCTCAGCACTATTGCAGTCTCCTAGCAGGTC...CCAGGTAAGTGGTAAACTCCTGAGCCACATCTCTAGTCTGGTCTTCTGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGGTCTATAAAAGGAAGTGTAGGTTTGAAATGAGGGAGGCTGGAAGAAATCACTCGGAGGCCTGGTaGTGGGTTTTCCTCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SKVYKRKCRFEMREAGRNHSEAW*WVFLQQ Trigger: TTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTG...ATTTCTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGACCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCAGCCAAGTCACACCGTaGAGGAGCAGAGACAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGSQVTP*RSRDRD Trigger: GTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGGCT...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGTCTATAAAAGGAAGTGTAGGTTTGAAATGAGGGAGGCTGGAAGAAATGACCTGCTAGGAGACTaGAATAGTGCTGAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SKVYKRKCRFEMREAGRNDLLGD*NSAEPQ Trigger: TTGAGGCTCAGCACTATTGCAGTCTCCTAGCAGGTC...ATTTCTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGACCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCAAGCAAGCAAGAAAGTaGGGGGTGAGGGGAAATAAC | + |
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Preference number: 2 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGKQARK*GVRGNN Trigger: GTTATTTCCCCTCACCCCTCACTTTCTTGCTTGCTT...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCCAAGAAAGTGAGGGGTaGGGGGAAATAACTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGQESEG*GEITDK Trigger: TTTGTCAGTTATTTCCCCTCACCCCTCACTTTCTTG...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCCTGGAGTTAGGGTTTTaGGCTTCACATCTTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGLELGF*ASHLLQ Trigger: TTGCAAAAGATGTGAAGCTCAAAACCCTAACTCCAG...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCGTCTATAAATCCTCTTaGATATATAAGGGTGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGVYKSS*IYKGGN Trigger: ATTGCCACCCTTATATATCCAAGAGGATTTATAGAC...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR GCA 72 bp | GTTAGCCCCTCAGCACAGGACGACCTGCTAGGAGACTaGAATAGTGCTGAGCCTCAAAAGATGGTCGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VSPSAQDDLLGD*NSAEPQKMVEE Trigger: TTCCTCGACCATCTTTTGAGGCTCAGCACTATTGCAGTCTCCTAGCAGGTCGTCCTGTGCTGAGGGGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR CCA 72 bp | AGACTAGAGATGTGGCTCAGGAGTTTACCACTTACCTaGCATGTGAACGGTCTTGGGTTAGCCCCTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: RLEMWLRSLPLT*HVNGLGLAPQH Trigger: GTGCTGAGGGGCTAACCCAAGACCGTTCACATGCCAGGTAAGTGGTAAACTCCTGAGCCACATCTCTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCTCAGCACAGGACGACCTGCTAGGAGACTGCAATAGTGCTGAGCCTCAAGGGGTGTTCAAGAACTaGTCTATAAATCCTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: SPSAQDDLLGDCNSAEPQGVFKN*SINPLG Trigger: TCCAAGAGGATTTATAGACAAGTTCTTGAACACCCC...TTGAGGCTCAGCACTATTGCAGTCTCCTAGCAGGTCGTCCTGTGCTGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR TCA 72 bp | TTGATCATGACGACATCAGTCCACTCGGAGGCCTGGTaGTGGGTTTTCCTCCAGCAACGAGTCTCAGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LIMTTSVHSEAW*WVFLQQRVSVC Trigger: ACAAACTGAGACTCGTTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTGGACTGATGTCGTCATGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTATAAAAGGAAGTGTAGGTTTGAAATGAGGGAGGCTGGAAGAAATGACCTGTCTGGAGTTAGGGTTTaGAGCTTCACATCTTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: VYKRKCRFEMREAGRNDLSGVRV*SFTSFA Trigger: TGCAAAAGATGTGAAGCTCAAAACCCTAACTCCAGA...CAGGTCATTTCTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | CCAAGTCACACCGTGGAGGAGCAGAGACAGGGACTTGGTAGCTTTGTGATGACAACGGTGTGCTTTCCCTaGGATTCCAGTGCCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSHTVEEQRQGLGSFVMTTVCFP*DSSAKH Trigger: GTGCTTGGCACTGGAATCGCAGGGAAAGCACACCGT...TGTCATCACAAAGCTACCAAGTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | CCAAGTCACACCGTGGAGGAGCAGAGACAGGGACTTGGTAGCTTTGTGATGACACAGTTGTCCCTTCAGTaGAGGGAGGGCACACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSHTVEEQRQGLGSFVMTQLSLQ*REGTLP Trigger: TGGAAGTGTGCCCTCCCTGCACTGAAGGGACAACTG...TGTCATCACAAAGCTACCAAGTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | CATGACGACATCAGTCCACTCGGAGGCCTGGTGATGGGTTTTCCTCCAGCAACGTTTGTGACGTCTTTCTaGCTGCTGCTTCTCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HDDISPLGGLVMGFPPATFVTSF*LLLLLC Trigger: GCAAAGGAGAAGCAGCAGGCAGAAAGACGTCACAAA...CGTTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTGGACTGATGTCGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | GACATCAGTCCACTCGGAGGCCTGGTGATGGGTTTTCCTCCAGCAACGAGTCTCCTGCTGCTTCTCCTTTaGATAAACTTCGGTAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: DISPLGGLVMGFPPATSLLLLLL*INFGRV Trigger: TACCCTACCGAAGTTTATGCAAAGGAGAAGCAGCAG...GAGACTCGTTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTGGACTGATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | CATGACGACATCAGTCCACTCGGAGGCCTGGTGATGGGTTTTCCTCCAGCAACGCTGCTGCTTCTCCTTTaGATAAACTTCGGTAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HDDISPLGGLVMGFPPATLLLLL*INFGRV Trigger: TACCCTACCGAAGTTTATGCAAAGGAGAAGCAGCAG...CGTTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTGGACTGATGTCGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | GTCTATAAAAGGAAGTGTAGGTTTGAAATGAGGGAGGCTGGAAGAAATGACCTGACGGTGTGCTTTCCCTaGGATTCCAGTGCCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VYKRKCRFEMREAGRNDLTVCFP*DSSAKH Trigger: GTGCTTGGCACTGGAATCGCAGGGAAAGCACACCGT...CAGGTCATTTCTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | GTCTATAAAAGGAAGTGTAGGTTTGAAATGAGGGAGGCTGGAAGAAATGACCTGCAGTTGTCCCTTCAGTaGAGGGAGGGCACACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VYKRKCRFEMREAGRNDLQLSLQ*REGTLP Trigger: TGGAAGTGTGCCCTCCCTGCACTGAAGGGACAACTG...CAGGTCATTTCTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | CCAAGTCACACCGTGGAGGAGCAGAGACAGGGACTTGGTAGCTTTGTGATGACACCACATTTTCATAGTTaGCATGCATCTTGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSHTVEEQRQGLGSFVMTPHFHS*HASCFS Trigger: AGAGAAACAAGATGCATGGCAACTATGAAAATGTGG...TGTCATCACAAAGCTACCAAGTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR GCA 90 bp | GGAACTCAGAAGACCAGACTAGAGATGTGGCTCAGGAGTTTACCACTTACCTGGCCACATTTTCATAGTTaGCATGCATCTTGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GTQKTRLEMWLRSLPLTWPHFHS*HASCFS Trigger: AGAGAAACAAGATGCATGGCAACTATGAAAATGTGG...CCAGGTAAGTGGTAAACTCCTGAGCCACATCTCTAGTCTGGTCTTCTGAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCAGCACAGGACGACCTGCTAGGAGACTGCAATAGTGCTGAGCCTCAAACAGGGCCTTCTCAGTaGTCCCTTCAGTGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SPSAQDDLLGDCNSAEPQTGPSQ*SLQCRE Trigger: CTCCCTGCACTGAAGGGACAACTGAGAAGGCCCTGT...TTGAGGCTCAGCACTATTGCAGTCTCCTAGCAGGTCGTCCTGTGCTGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR CAA 90 bp | CCAAGTCACACCGTGGAGGAGCAGAGACAGGGACTTGGTAGCTTTGTGATGACAACAGGGCCTTCTCAGTaGTCCCTTCAGTGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSHTVEEQRQGLGSFVMTTGPSQ*SLQCRE Trigger: CTCCCTGCACTGAAGGGACAACTGAGAAGGCCCTGT...TGTCATCACAAAGCTACCAAGTCCCTGTCTCTGCTCCTCCACGGTGTGACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR CAA 90 bp | CATGACGACATCAGTCCACTCGGAGGCCTGGTGATGGGTTTTCCTCCAGCAACGGTATATATCGTCATCTaGAGGCGGAGGAGGGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: HDDISPLGGLVMGFPPATVYIVI*RRRRAR Trigger: CCTAGCCCTCCTCCGCCTCAAGATGACGATATATAC...CGTTGCTGGAGGAAAACCCATCACCAGGCCTCCGAGTGGACTGATGTCGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS GCA 90 bp | ACGGCTGCGTGTTTTCATACAGGGCCTTCTCAGTTGTCCCTTCAGTaGAGGGAGGGCACACTTCCACATTTTCATAGTTGCCATGCATCT | + |
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Preference number: 5 (lower is better) Translates to: TAACFHTGPSQLSLQ*REGTLPHFHSCHAS Trigger: AGATGCATGGCAACTATGAAAATGTGGAAGTGTGCCCTCCCTGCACTGAAGGGACAACTGAGAAGGCCCTGTATGAAAACACGCAGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS GCA 90 bp | GAGCTGACGGTTTTTGTGACGTCTTTCTGCCTGCTGCTTCTCCTTTaGATAAACTTCGGTAGGGTAAACGGTGTGCTTTCCCTGCGATTC | + |
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Preference number: 5 (lower is better) Translates to: ELTVFVTSFCLLLLL*INFGRVNGVLSLRF Trigger: GAATCGCAGGGAAAGCACACCGTTTACCCTACCGAAGTTTATGCAAAGGAGAAGCAGCAGGCAGAAAGACGTCACAAAAACCGTCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS-3UTR CAA 90 bp | ACCAGACTTTTAGTTCCACATACGATGTCTTTGGATCTAAAAGTATTACTAGGCGTATATATCGTCATCTaGAGGCGGAGGAGGGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TRLLVPHTMSLDLKVLLGVYIVI*RRRRAR Trigger: CCTAGCCCTCCTCCGCCTCAAGATGACGATATATAC...GCCTAGTAATACTTTTAGATCCAAAGACATCGTATGTGGAACTAAAAGTCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS GCA 72 bp | GGTAGGGTAAACGGTGTGCTTTCCCTGCGATTCCAGTaGCAAGCACATCCAATCCCACAGAGCAGCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRVNGVLSLRFQ*QAHPIPQSSKR Trigger: CCTCTTGCTGCTCTGTGGGATTGGATGTGCTTGGCACTGGAATCGCAGGGAAAGCACACCGTTTACCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS CAA 90 bp | CGGAGGAGGGCTAGGTTTCTGGAAGTTATAATAGAGGGGGTCCGTTaGATTCCCGTAGACGTGTTCCTCGAGATTAGACGGCTGCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RRRARFLEVIIEGVR*IPVDVFLEIRRLRV Trigger: AACACGCAGCCGTCTAATCTCGAGGAACACGTCTACGGGAATCAAACGGACCCCCTCTATTATAACTTCCAGAAACCTAGCCCTCCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS GCA 72 bp | TGTTTTCATACAGGGCCTTCTCAGTTGTCCCTTCAGTaGAGGGAGGGCACACTTCCACATTTTCATAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFHTGPSQLSLQ*REGTLPHFHSC Trigger: GCAACTATGAAAATGTGGAAGTGTGCCCTCCCTGCACTGAAGGGACAACTGAGAAGGCCCTGTATGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS CAA 72 bp | TGCATCTTGTTTCTCTTGGCAGTAGACTTGTGGCCTTaGCTTTCCACCGAGGCTTTCATGCTTGGGCTAATC | + |
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Preference number: 6 (lower is better) Translates to: CILFLLAVDLWP*LSTEAFMLGLI Trigger: GATTAGCCCAAGCATGAAAGCCTCGGTGGAAAGCAAAGGCCACAAGTCTACTGCCAAGAGAAACAAGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS CAA 72 bp | GCTAGGTTTCTGGAAGTTATAATAGAGGGGGTCCGTTaGATTCCCGTAGACGTGTTCCTCGAGATTAGACGG | + |
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Preference number: 6 (lower is better) Translates to: ARFLEVIIEGVR*IPVDVFLEIRR Trigger: CCGTCTAATCTCGAGGAACACGTCTACGGGAATCAAACGGACCCCCTCTATTATAACTTCCAGAAACCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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| CDS CAA 72 bp | CTAGTCGCAATCTGGAAGGATGTATATATCGTCATCTaGAGGCGGAGGAGGGCTAGGTTTCTGGAAGTTATA | + |
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Preference number: 6 (lower is better) Translates to: LVAIWKDVYIVI*RRRRARFLEVI Trigger: TATAACTTCCAGAAACCTAGCCCTCCTCCGCCTCAAGATGACGATATATACATCCTTCCAGATTGCGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058806.7 ENSMUST00000224534.2 |
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