Pregenerated sensors for GALT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036073Ensembl transcript IDs: ENSMUST00000084695.12, ENSMUST00000108038.2, ENSMUST00000108038.3
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGTCCCAGGTCTGTCAGGTACAAAGATTCAAGGCCCTGATGTaGTCACAGTCAAGCAATGGCTGCCGTTTCCTTGTCTTTCTGCGC | + |
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Preference number: 1 (lower is better) Translates to: SRSQVCQVQRFKALM*SQSSNGCRFLVFLR Trigger: GCGCAGAAAGACAAGGAAACGGCAGCCATTGCTTGACTGTGACCACATCAGGGCCTTGAATCTTTGTACCTGACAGACCTGGGACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR GCA 90 bp | GTACAAAGATTCAAGGCCCTGATGTGGTCACAGTCAAGCAATGGCTaGCGTTTCCTTGTCTTTCTGCGCCAGGCAATAGTGTACCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: VQRFKALMWSQSSNG*RFLVFLRQAIVYLG Trigger: CCCGAGGTACACTATTGCCTGGCGCAGAAAGACAAGGAAACGGCAGCCATTGCTTGACTGTGACCACATCAGGGCCTTGAATCTTTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CCA 90 bp | TCAGGTACAAAGATTCAAGGCCCTGATGTGGTCACAGTCAAGCAATaGCTGCCGTTTCCTTGTCTTTCTGCGCCAGGCAATAGTGTACCT | + |
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Preference number: 1 (lower is better) Translates to: SGTKIQGPDVVTVKQ*LPFPCLSAPGNSVP Trigger: AGGTACACTATTGCCTGGCGCAGAAAGACAAGGAAACGGCAGCCATTGCTTGACTGTGACCACATCAGGGCCTTGAATCTTTGTACCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CAA 90 bp | ATAAAGGGACAAGAAGCAATCAGGGAGAGTAAGGGTCACCTGGAATaGTACCGAGGCGTTCTGGGCCCAGGAAATACTGAGGAGGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: IKGQEAIRESKGHLE*YRGVLGPGNTEEGL Trigger: TAAGCCCTCCTCAGTATTTCCTGGGCCCAGAACGCCTCGGTACAATTCCAGGTGACCCTTACTCTCCCTGATTGCTTCTTGTCCCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CCA 72 bp | AGAGTAAGGGTCACCTGGAATTGTACCGAGGCGTTCTaGGCCCAGGAAATACTGAGGAGGGCTTATGGGATG | + |
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Preference number: 3 (lower is better) Translates to: RVRVTWNCTEAF*AQEILRRAYGM Trigger: CATCCCATAAGCCCTCCTCAGTATTTCCTGGGCCCAGAACGCCTCGGTACAATTCCAGGTGACCCTTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CCA 72 bp | AGGGACAAGAAGCAATCAGGGAGAGTAAGGGTCACCTaGAATTGTACCGAGGCGTTCTGGGCCCAGGAAATA | + |
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Preference number: 3 (lower is better) Translates to: RDKKQSGRVRVT*NCTEAFWAQEI Trigger: TATTTCCTGGGCCCAGAACGCCTCGGTACAATTCCAGGTGACCCTTACTCTCCCTGATTGCTTCTTGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CCA 72 bp | AAGATTCAAGGCCCTGATGTGGTCACAGTCAAGCAATaGCTGCCGTTTCCTTGTCTTTCTGCGCCAGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: KIQGPDVVTVKQ*LPFPCLSAPGN Trigger: ATTGCCTGGCGCAGAAAGACAAGGAAACGGCAGCCATTGCTTGACTGTGACCACATCAGGGCCTTGAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CCA 72 bp | CAGGTCTGTCAGGTACAAAGATTCAAGGCCCTGATGTaGTCACAGTCAAGCAATGGCTGCCGTTTCCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: QVCQVQRFKALM*SQSSNGCRFLV Trigger: GACAAGGAAACGGCAGCCATTGCTTGACTGTGACCACATCAGGGCCTTGAATCTTTGTACCTGACAGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| 3UTR CAA 72 bp | CAAGAAGCAATCAGGGAGAGTAAGGGTCACCTGGAATaGTACCGAGGCGTTCTGGGCCCAGGAAATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: QEAIRESKGHLE*YRGVLGPGNTE Trigger: CTCAGTATTTCCTGGGCCCAGAACGCCTCGGTACAATTCCAGGTGACCCTTACTCTCCCTGATTGCTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108038.2 |
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| CDS TCA 90 bp | CTGGTGTTCGCTCGCCCGGAAGGTCGCTGCCATGGCGTCCGCCTCTaGAGCCTGCTGGCGCTGCTCAGGATCGGCTCCGCTATGCGACGT | + |
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Preference number: 5 (lower is better) Translates to: LVFARPEGRCHGVRL*SLLALLRIGSAMRR Trigger: ACGTCGCATAGCGGAGCCGATCCTGAGCAGCGCCAGCAGGCTTCAGAGGCGGACGCCATGGCAGCGACCTTCCGGGCGAGCGAACACCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 90 bp | AGATCATCACGCTCAGCGGGGTTCAGCTCAGGTAGCCGCCGCACGTaGCGCCGGGGCAGCAGAAGTGTCTGGAAAGGCCACACTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSSRSAGFSSGSRRT*RRGSRSVWKGHTAQ Trigger: CTGGGCAGTGTGGCCTTTCCAGACACTTCTGCTGCCCCGGCGGCACGTGCGGCGGCTACCTGAGCTGAACCCCGCTGAGCGTGATGATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 90 bp | TGTAGCGAATATGCTGGTGTTCGCTCGCCCGGAAGGTCGCTGCCATaGCGTCCGCCTCTGAAGCCTGCTGGCGCTGCTCAGGATCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: CSEYAGVRSPGRSLP*RPPLKPAGAAQDRL Trigger: GAGCCGATCCTGAGCAGCGCCAGCAGGCTTCAGAGGCGGACGCCATGGCAGCGACCTTCCGGGCGAGCGAACACCAGCATATTCGCTACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 90 bp | ATGACCTTACAAACTCCTCTGGCGGCCTCTGCTCGGAAGAGAGGGTaGTCACTGGGTCCTGGATCCGGAGCATCGGGCTGCAGAGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: MTLQTPLAASARKRG*SLGPGSGASGCRAG Trigger: CCCGGCTCTGCAGCCCGATGCTCCGGATCCAGGACCCAGTGACCACCCTCTCTTCCGAGCAGAGGCCGCCAGAGGAGTTTGTAAGGTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 90 bp | TCTTCAGAAGCTGGGGCTCCACTTGTCCTTGCCAGGGCCGCTTCATaGGATGAGCCGACACTAACACCCACTCGTCCTGGAGCGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SSEAGAPLVLARAAS*DEPTLTPTRPGAGC Trigger: ACAACCCGCTCCAGGACGAGTGGGTGTTAGTGTCGGCTCATCGCATGAAGCGGCCCTGGCAAGGACAAGTGGAGCCCCAGCTTCTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 90 bp | GCTGTGATAGGTCTGCTGGGATCGCTCTTCACGCTGGGCGATATCTaGCAGGAAGCTGCTAGCCCAAACCTGGCAGTGGGGATGGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: AVIGLLGSLFTLGDI*QEAASPNLAVGMGV Trigger: AACCCCCATCCCCACTGCCAGGTTTGGGCTAGCAGCTTCCTGCCAGATATCGCCCAGCGTGAAGAGCGATCCCAGCAGACCTATCACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 90 bp | ATCTCAGGGACAGACATGAGTGGCAGCGTCACATCCGACCAGGGGTaGAAGCACATGACCTTACAAACTCCTCTGGCGGCCTCTGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: ISGTDMSGSVTSDQG*KHMTLQTPLAASAR Trigger: CCGAGCAGAGGCCGCCAGAGGAGTTTGTAAGGTCATGTGCTTCCACCCCTGGTCGGATGTGACGCTGCCACTCATGTCTGTCCCTGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 90 bp | GTCTGGAAAGGCCACACTGCCCAGAAGGGGACCAGAACTATCCAGTaGTCACTGGTTAGGACCAGACGTTCCTTCCTGAGGAGCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VWKGHTAQKGTRTIQ*SLVRTRRSFLRSSW Trigger: CCAAGAGCTCCTCAGGAAGGAACGTCTGGTCCTAACCAGTGAGCACTGGATAGTTCTGGTCCCCTTCTGGGCAGTGTGGCCTTTCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 90 bp | AGGTGGCTCCAGTCTTTAATCCCGTGGGAGCCCCATGCCAGCCCATaGAGTAGGGAAAGGATGTCTCAAATAGATTGTCGTACTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RWLQSLIPWEPHASP*SRERMSQIDCRTWS Trigger: TGACCAAGTACGACAATCTATTTGAGACATCCTTTCCCTACTCCATGGGCTGGCATGGGGCTCCCACGGGATTAAAGACTGGAGCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS TCA 90 bp | CCAGAACTATCCAGTGCTCACTGGTTAGGACCAGACGTTCCTTCCTaGGGAGCTCTTGGTGACCATATTCCAATAACAAAGGTTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: PELSSAHWLGPDVPS*GALGDHIPITKVFH Trigger: ATGGAAAACCTTTGTTATTGGAATATGGTCACCAAGAGCTCCTCAGGAAGGAACGTCTGGTCCTAACCAGTGAGCACTGGATAGTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 72 bp | CGGAAGGTCGCTGCCATGGCGTCCGCCTCTGAAGCCTaGTGGCGCTGCTCAGGATCGGCTCCGCTATGCGAC | + |
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Preference number: 6 (lower is better) Translates to: RKVAAMASASEA*WRCSGSAPLCD Trigger: GTCGCATAGCGGAGCCGATCCTGAGCAGCGCCAGCAGGCTTCAGAGGCGGACGCCATGGCAGCGACCTTCCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | TATGCTGGTGTTCGCTCGCCCGGAAGGTCGCTGCCATaGCGTCCGCCTCTGAAGCCTGCTGGCGCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: YAGVRSPGRSLP*RPPLKPAGAAQ Trigger: CTGAGCAGCGCCAGCAGGCTTCAGAGGCGGACGCCATGGCAGCGACCTTCCGGGCGAGCGAACACCAGCATA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | CAAACTCCTCTGGCGGCCTCTGCTCGGAAGAGAGGGTaGTCACTGGGTCCTGGATCCGGAGCATCGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QTPLAASARKRG*SLGPGSGASGC Trigger: GCAGCCCGATGCTCCGGATCCAGGACCCAGTGACCACCCTCTCTTCCGAGCAGAGGCCGCCAGAGGAGTTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS TCA 72 bp | GGCTCCACTTGTCCTTGCCAGGGCCGCTTCATGCGATaGGCCGACACTAACACCCACTCGTCCTGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: GSTCPCQGRFMR*ADTNTHSSWSG Trigger: CCCGCTCCAGGACGAGTGGGTGTTAGTGTCGGCTCATCGCATGAAGCGGCCCTGGCAAGGACAAGTGGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | ATTAGCTCGTGTGGCCCCGGGACACAGAGGGTTGAGTaGGTCGTGGCGGGGCACTGTCTTCAGAAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ISSCGPGTQRVE*VVAGHCLQKLG Trigger: CCCCAGCTTCTGAAGACAGTGCCCCGCCACGACCCACTCAACCCTCTGTGTCCCGGGGCCACACGAGCTAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CAA 72 bp | GTGGCGGGGCACTGTCTTCAGAAGCTGGGGCTCCACTaGTCCTTGCCAGGGCCGCTTCATGCGATGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VAGHCLQKLGLH*SLPGPLHAMSR Trigger: TCGGCTCATCGCATGAAGCGGCCCTGGCAAGGACAAGTGGAGCCCCAGCTTCTGAAGACAGTGCCCCGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 72 bp | GCTGGGGCTCCACTTGTCCTTGCCAGGGCCGCTTCATaGGATGAGCCGACACTAACACCCACTCGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: AGAPLVLARAAS*DEPTLTPTRPG Trigger: TCCAGGACGAGTGGGTGTTAGTGTCGGCTCATCGCATGAAGCGGCCCTGGCAAGGACAAGTGGAGCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | TTGAGTGGGTCGTGGCGGGGCACTGTCTTCAGAAGCTaGGGCTCCACTTGTCCTTGCCAGGGCCGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LSGSWRGTVFRS*GSTCPCQGRFM Trigger: CATGAAGCGGCCCTGGCAAGGACAAGTGGAGCCCCAGCTTCTGAAGACAGTGCCCCGCCACGACCCACTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | GGTCTGCTGGGATCGCTCTTCACGCTGGGCGATATCTaGCAGGAAGCTGCTAGCCCAAACCTGGCAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GLLGSLFTLGDI*QEAASPNLAVG Trigger: CCCCACTGCCAGGTTTGGGCTAGCAGCTTCCTGCCAGATATCGCCCAGCGTGAAGAGCGATCCCAGCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 72 bp | CCGCCGGGGCAGCAGAAGTGTCTGGAAAGGCCACACTaGCCAGAAGGGGACCAGAACTATCCAGTGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: PPGQQKCLERPH*PEGDQNYPVLT Trigger: AGTGAGCACTGGATAGTTCTGGTCCCCTTCTGGGCAGTGTGGCCTTTCCAGACACTTCTGCTGCCCCGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | GCCAGTGGTCACAGGTGGCTCCAGTCTTTAATCCCGTaGGAGCCCCATGCCAGCCCATGGAGTAGGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ASGHRWLQSLIP*EPHASPWSRER Trigger: CCTTTCCCTACTCCATGGGCTGGCATGGGGCTCCCACGGGATTAAAGACTGGAGCCACCTGTGACCACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 72 bp | GGGTGGTCACTGGGTCCTGGATCCGGAGCATCGGGCTaGAGAGCCGGGAAGTCATTGTCAAACAGAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GWSLGPGSGASG*RAGKSLSNRKV Trigger: TACCTTTCTGTTTGACAATGACTTCCCGGCTCTGCAGCCCGATGCTCCGGATCCAGGACCCAGTGACCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS GCA 72 bp | GAAGCACATGACCTTACAAACTCCTCTGGCGGCCTCTaGTCGGAAGAGAGGGTGGTCACTGGGTCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: EAHDLTNSSGGL*SEERVVTGSWI Trigger: GATCCAGGACCCAGTGACCACCCTCTCTTCCGAGCAGAGGCCGCCAGAGGAGTTTGTAAGGTCATGTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS CCA 72 bp | ACAGACATGAGTGGCAGCGTCACATCCGACCAGGGGTaGAAGCACATGACCTTACAAACTCCTCTGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TDMSGSVTSDQG*KHMTLQTPLAA Trigger: GGCCGCCAGAGGAGTTTGTAAGGTCATGTGCTTCCACCCCTGGTCGGATGTGACGCTGCCACTCATGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS TCA 72 bp | TCCAGTGCTCACTGGTTAGGACCAGACGTTCCTTCCTaGGGAGCTCTTGGTGACCATATTCCAATAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SSAHWLGPDVPS*GALGDHIPITK Trigger: CTTTGTTATTGGAATATGGTCACCAAGAGCTCCTCAGGAAGGAACGTCTGGTCCTAACCAGTGAGCACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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| CDS TCA 72 bp | GTTAGGACCAGACGTTCCTTCCTGAGGAGCTCTTGGTaGCCATATTCCAATAACAAAGGTTTTCCATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VRTRRSFLRSSW*PYSNNKGFPCW Trigger: CCAGCATGGAAAACCTTTGTTATTGGAATATGGTCACCAAGAGCTCCTCAGGAAGGAACGTCTGGTCCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084695.12 ENSMUST00000108038.3 |
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