Pregenerated sensors for GALR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024553Ensembl transcript IDs: ENSMUST00000065224.8
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATaGGGCAGCATGTCTCTGTGTGTCTCTATTCTCCCACAGGATACT | + |
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Preference number: 1 (lower is better) Translates to: IWGKQSLDICWYKSA*GSMSLCVSILPQDT Trigger: AGTATCCTGTGGGAGAATAGAGACACACAGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR CCA 90 bp | GTACTTGATGGGTCTCACATCCCCAGACAGACCTCTGGACACCCACGACTCAGATTTCCCTATATTAACTaGCCTGAAAATGTGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: VLDGSHIPRQTSGHPRLRFPYIN*PENVDF Trigger: GAAATCCACATTTTCAGGCCAGTTAATATAGGGAAA...TCTGAGTCGTGGGTGTCCAGAGGTCTGTCTGGGGATGTGAGACCCATCAAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR CAA 90 bp | GAGGCAGCATGTCTCTGTGTGTCTCTATTCTCCCACAGGATACTTTaGTCTTCGTTCATTCTGAATCAAACGTCTCTCCTCTTTGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: EAACLCVSLFSHRIL*SSFILNQTSLLFGD Trigger: GTCTCCAAAGAGGAGAGACGTTTGATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAGACATGCTGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTTGTCTTCGTTCATTCTaGATCAAACGTCTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KTILRHLLVQICMRQHVSCLRSF*IKRLSS Trigger: AGAGGAGAGACGTTTGATTCAGAATGAACGAAGACA...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATACTGTGGAATGTAGTTaGATCGATAGGAATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LCVSLFSHRILLSSFILNTVECS*IDRNCC Trigger: ACAGCAATTCCTATCGATCCAACTACATTCCACAGT...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTAATGAAATTGGAAAATaGTCTTCAGTAGACCCACGA | + |
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Preference number: 2 (lower is better) Translates to: KTILRHLLVQICMRQHVSNEIGK*SSVDPR Trigger: TCGTGGGTCTACTGAAGATCATTTTCCAATTTCATT...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATACTTACTTTACACCATaGAGATCAAAACATTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGKTILRHLLVQICMRQHTYFTP*RSKHLQ Trigger: CTGCAAATGTTTTGATCTCCATGGTGTAAAGTAAGT...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR TCA 72 bp | CGTAGTAGAGTCAACGCTGATCTCCCAGGATGTACTTaGTGGGTCTCACATCCCCAGACAGACCTCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: RSRVNADLPGCT*WVSHPQTDLWT Trigger: TGTCCAGAGGTCTGTCTGGGGATGTGAGACCCATCAAGTACATCCTGGGAGATCAGCGTTGACTCTACTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR TCA 72 bp | ATAACACCAACAGACACATCCCGCCCTAGCAGCCACTaGGAACTCTTCATTCCCCGTGATTCCAACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ITPTDTSRPSSH*ELFIPRDSNSP Trigger: GGGACTGTTGGAATCACGGGGAATGAAGAGTTCTCAGTGGCTGCTAGGGCGGGATGTGTCTGTTGGTGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTTGATGGGTCTCACATCCCCAGACAGACCTCTGGACACCCACGACTCAGAATTCTGTGCCCACAGTaGTATTTCAAAGCACAGACT | + |
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Preference number: 3 (lower is better) Translates to: VLDGSHIPRQTSGHPRLRILCPQ*YFKAQT Trigger: AGTCTGTGCTTTGAAATACAACTGTGGGCACAGAAT...TCTGAGTCGTGGGTGTCCAGAGGTCTGTCTGGGGATGTGAGACCCATCAAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR TCA 72 bp | ATCCCCAGACAGACCTCTGGACACCCACGACTCAGATaGGGTGCCGGTCCACAAAGGTTCAATAAAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: IPRQTSGHPRLR*GAGPQRFNKIK Trigger: TTTTATTTTATTGAACCTTTGTGGACCGGCACCTCATCTGAGTCGTGGGTGTCCAGAGGTCTGTCTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR GCA 72 bp | GGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTaGATGAGGCAGCATGTCTCTGTGTGTCTCTATTCT | + |
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Preference number: 3 (lower is better) Translates to: GKTILRHLLVQI*MRQHVSVCLYS Trigger: AGAATAGAGACACACAGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATTGGAGATCAAAACATTaGCAGAGTGCTGTAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: LCVSLFSHRILLSSFILNWRSKH*QSAVGL Trigger: AAGTCCTACAGCACTCTGCAAATGTTTTGATCTCCA...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | GTACTTGATGGGTCTCACATCCCCAGACAGACCTCTGGACACCCACGACTCAGAAGTTCTCCACGCCAATaGCGAAGAGCGGCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: VLDGSHIPRQTSGHPRLRSSPRQ*RRAAWT Trigger: AGTCCAGGCCGCTCTTCGGCATTGGCGTGGAGAACT...TCTGAGTCGTGGGTGTCCAGAGGTCTGTCTGGGGATGTGAGACCCATCAAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | GTACTTGATGGGTCTCACATCCCCAGACAGACCTCTGGACACCCACGACTCAGAAGCTTGTTGGGCCACTaGTCCCAGCAGAAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLDGSHIPRQTSGHPRLRSLLGH*SQQKVW Trigger: CCAGACCTTCTGCTGGGAGCAGTGGCCCAACAAGCT...TCTGAGTCGTGGGTGTCCAGAGGTCTGTCTGGGGATGTGAGACCCATCAAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | TCACTATTCTGTGCCCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCCGTTGCGGGACACCCTaGGGGAGGAGGAGCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SLFCAHSCISKHRLDYYLRCGTP*GRRSAA Trigger: CGCGGCGCTCCTCCTCCCTCAGGGTGTCCCGCAACG...GAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGGGCACAGAATAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGCCCACGCCCAGCAGTaGGTTGCGGGACACCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LGKTILRHLLVQICMRQHAHAQQ*VAGHPE Trigger: CTCAGGGTGTCCCGCAACGCACTGCTGGGCGTGGGC...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGCTGCGCGGCTTGCCTaGTTTGCTGCGCGCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LGKTILRHLLVQICMRQHAARLA*FAARQH Trigger: GTGCTGGCGCGCAGCAAACCAGGCAAGCCGCGCAGC...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCCACCGGCGAGGCCATaGCGATGGACAGCGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNPPARP*RWTAPR Trigger: TCTGGGCGCTGTCCATCGCCATGGCCTCGCCGGTGG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATCGCCCAGCACCCAGGTaGGCAGTGCATACACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LGKTILRHLLVQICMRQHRPAPR*AVHTRW Trigger: CCACCGTGTATGCACTGCCCACCTGGGTGCTGGGCG...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATGCCGCGAGTGCACAATaGCCACGTAGCGATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNAASAQ*PRSDPQ Trigger: CTGTGGATCGCTACGTGGCCATTGTGCACTCGCGGC...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTACATCGCGGCCAGGGTaGAGATGCTCACCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSTSRPG*RCSPAW Trigger: CCATGCTGGTGAGCATCTTCACCCTGGCCGCGATGT...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCAGAGGTGGACGACATaGTGGGGCAGCCAGGATATG | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNQRWTT*WGSQDM Trigger: CATATCCTGGCTGCCCCATCATGTCGTCCACCTCTG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTACAGGTTGGTGGTGCTaGGCGGCTTGCCTGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSTGWWC*AACLVC Trigger: GCAAACCAGGCAAGCCGCGCAGCACCACCAACCTGT...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCACCCAGGTGGGCAGTaGATACACGGTGGCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNHPGGQ*IHGGLK Trigger: TTTCAGGCCACCGTGTATGCACTGCCCACCTGGGTG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | TCACTATTCTGTGCCCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCGGAAGCTGGCGTCAGTaGGAAGGCTCCAAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLFCAHSCISKHRLDYYLGSWRQ*EGSKLS Trigger: GCTGAGTTTGGAGCCTTCCCACTGACGCCAGCTTCC...GAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGGGCACAGAATAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTGCATACACGGTGGCCTaGAAAGGGATGCAGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSAYTVA*KGMQKS Trigger: GCTCTTCTGCATCCCTTTTCAGGCCACCGTGTATGC...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTTCTTGTGGAGCTTGTTaGGCCACTGCTCCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSSCGAC*ATAPSR Trigger: TCTGCTGGGAGCAGTGGCCCAACAAGCTCCACAAGA...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR CAA 72 bp | ATAGGAATTGCTGTGGAGAATAAGCTGCCATGTTACTaGATAATTCGCTCCGCCCTCCTCTCTCTAACACAC | + |
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Preference number: 4 (lower is better) Translates to: IGIAVENKLPCY*IIRSALLSLTH Trigger: GTGTGTTAGAGAGAGGAGGGCGGAGCGAATTATCAAGTAACATGGCAGCTTATTCTCCACAGCAATTCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR CAA 72 bp | AAACGTCTCTCCTCTTTGGAGACGCAGCTAACGCATTaGCCAAAAGCATCCTTAAAGCTACACACAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KRLSSLETQLTH*PKASLKLHTGL Trigger: CAAACCTGTGTGTAGCTTTAAGGATGCTTTTGGCAAATGCGTTAGCTGCGTCTCCAAAGAGGAGAGACGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | TCACTATTCTGTGCCCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCCACCAGGACGGTCTGTaGAGTCTTTTTCTTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SLFCAHSCISKHRLDYYLHQDGL*SLFLGC Trigger: GCATCCAAGAAAAAGACTGCACAGACCGTCCTGGTG...GAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGGGCACAGAATAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGGGGCAGCCAGGATATaGCAAATACTACAACGACCA | + |
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Preference number: 4 (lower is better) Translates to: LGKTILRHLLVQICMRQHGAARI*QILQRP Trigger: TGGTCGTTGTAGTATTTGGCATATCCTGGCTGCCCC...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTTCCCAGCAGAAGGTCTaGTTGCTGTCCCGATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSSQQKV*LLSRWK Trigger: TTTCCATCGGGACAGCAACCAGACCTTCTGCTGGGA...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCATAGCAAAAGCAGATaGGCAGTAAGGGCAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNHSKSR*AVRAEG Trigger: ACCTTCTGCCCTTACTGCTCATCTGCTTTTGCTATG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTTATGATGGGGTTCACTaGGGAGTTGCTGTATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSYDGVH*GVAVCQ Trigger: CTGGCATACAGCAACTCCTCAGTGAACCCCATCATA...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCGCAAACATGACACTTaGACACTTGCTTGTACGCCT | + |
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Preference number: 4 (lower is better) Translates to: LCVSLFSHRILLSSFILNRKHDT*TLACTP Trigger: AGGCGTACAAGCAAGTGTTCAAGTGTCATGTTTGCG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR GCA 90 bp | TCACTATTCTGTGCCCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCACCCAAAGACGAAAGTaGACACCACGTAAGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLFCAHSCISKHRLDYYLTQRRK*TPRKPS Trigger: AGAAGGCTTACGTGGTGTGCACTTTCGTCTTTGGGT...GAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGGGCACAGAATAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | AAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATGTCTCTAGAGAAAGGCATATATaGTGGGGTTCACTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KTILRHLLVQICMRQHVSRERHI*WGSLRS Trigger: ACTCCTCAGTGAACCCCATCATATATGCCTTTCTCT...AGAGACATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| 3UTR CAA 72 bp | TACAGAACTTACTTTACACCATGGAGATCAAAACATTaGCAGAGTGCTGTAGGACTTTCATTCCTTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YRTYFTPWRSKH*QSAVGLSFLES Trigger: GCTCTCAAGGAATGAAAGTCCTACAGCACTCTGCAAATGTTTTGATCTCCATGGTGTAAAGTAAGTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR TCA 90 bp | CCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCTCCTCTCAAATTTTGATTCATCGCAAACATaGCACTTGAACACTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PQLYFKAQTRLLPLLSNFDSSQT*HLNTCL Trigger: CAAGCAAGTGTTCAAGTGTCATGTTTGCGATGAATC...AAAATTTGAGAGGAGAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 90 bp | GAAGTTCTCCACGCCAATGCCGAAGAGCGGCCTGGACTCCGGGGCTaGCGGCTCTGGGTCGCTCCCATTCCCTTCACTGAGGTTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: EVLHANAEERPGLRG*RLWVAPIPFTEVHH Trigger: ATGGTGAACCTCAGTGAAGGGAATGGGAGCGACCCAGAGCCGCCAGCCCCGGAGTCCAGGCCGCTCTTCGGCATTGGCGTGGAGAACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS GCA 90 bp | TCTTGTGGAGCTTGTTGGGCCACTGCTCCCAGCAGAAGGTCTGGTTaGTGTCCCGATGGAAAAGACGCTGGTGGTAGGCCACCGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SCGACWATAPSRRSG*CPDGKDAGGRPPAR Trigger: CCTCGCCGGTGGCCTACCACCAGCGTCTTTTCCATCGGGACAGCAACCAGACCTTCTGCTGGGAGCAGTGGCCCAACAAGCTCCACAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS TCA 90 bp | GGCGTCAGTGGGAAGGCTCCAAACTCAGCCCAGAGGTGGACGACATaGTGGGGCAGCCAGGATATGCCAAATACTACAACGACCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVSGKAPNSAQRWTT*WGSQDMPNTTTTTR Trigger: CCTGGTGGTCGTTGTAGTATTTGGCATATCCTGGCTGCCCCATCATGTCGTCCACCTCTGGGCTGAGTTTGGAGCCTTCCCACTGACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 90 bp | CAGGCAATGGGCGGTGATTCTGAAGAAGAAGGAAGCTGGCGTCAGTaGGAAGGCTCCAAACTCAGCCCAGAGGTGGACGACATGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: QAMGGDSEEEGSWRQ*EGSKLSPEVDDMMG Trigger: CCCCATCATGTCGTCCACCTCTGGGCTGAGTTTGGAGCCTTCCCACTGACGCCAGCTTCCTTCTTCTTCAGAATCACCGCCCATTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 90 bp | GCTGTATGCCAGGCAATGGGCGGTGATTCTGAAGAAGAAGGAAGCTaGCGTCAGTGGGAAGGCTCCAAACTCAGCCCAGAGGTGGACGAC | + |
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Preference number: 5 (lower is better) Translates to: AVCQAMGGDSEEEGS*RQWEGSKLSPEVDD Trigger: GTCGTCCACCTCTGGGCTGAGTTTGGAGCCTTCCCACTGACGCCAGCTTCCTTCTTCTTCAGAATCACCGCCCATTGCCTGGCATACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 90 bp | CAAAGACGAAAGTGCACACCACGTAAGCCTTCTTGTGGAGCTTGTTaGGCCACTGCTCCCAGCAGAAGGTCTGGTTGCTGTCCCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: QRRKCTPRKPSCGAC*ATAPSRRSGCCPDG Trigger: TCCATCGGGACAGCAACCAGACCTTCTGCTGGGAGCAGTGGCCCAACAAGCTCCACAAGAAGGCTTACGTGGTGTGCACTTTCGTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCGCGGCTTGCCTGGTTaGCTGCGCGCCAGCACGGTG | + |
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Preference number: 5 (lower is better) Translates to: LCVSLFSHRILLSSFILNRGLPG*LRASTV Trigger: CACCGTGCTGGCGCGCAGCAAACCAGGCAAGCCGCG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATACGCCCAGCAGTGCGTaGCGGGACACCCTGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCVSLFSHRILLSSFILNTPSSA*RDTLRE Trigger: CTCCCTCAGGGTGTCCCGCAACGCACTGCTGGGCGT...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CCACAGTTGTATTTCAAAGCACAGACTAGACTATTACCTCTCCTCTCAAATTTTGTGGTGCTGCGCGGCTaGCCTGGTTTGCTGCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PQLYFKAQTRLLPLLSNFVVLRG*PGLLRA Trigger: GGCGCGCAGCAAACCAGGCAAGCCGCGCAGCACCAC...AAAATTTGAGAGGAGAGGTAATAGTCTAGTCTGTGCTTTGAAATACAACTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 90 bp | TGGCGGGGTGTCCATCCGGCTCTTGTTTTCCTTAGTTTCACTGCGTaGAGATTCATCGCAAACATGACACTTGAACACTTGCTTGTACGC | + |
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Preference number: 5 (lower is better) Translates to: WRGVHPALVFLSFTA*RFIANMTLEHLLVR Trigger: GCGTACAAGCAAGTGTTCAAGTGTCATGTTTGCGATGAATCTCCACGCAGTGAAACTAAGGAAAACAAGAGCCGGATGGACACCCCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATGCCTTCTTGTGGAGCTaGTTGGGCCACTGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LCVSLFSHRILLSSFILNAFLWS*LGHCSQ Trigger: CTGGGAGCAGTGGCCCAACAAGCTCCACAAGAAGGC...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATGGGTTCACTGAGGAGTaGCTGTATGCCAGGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: LCVSLFSHRILLSSFILNGFTEE*LYARQW Trigger: CCATTGCCTGGCATACAGCAACTCCTCAGTGAACCC...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATCAGCAGAAGGTCTGGTaGCTGTCCCGATGGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LGKTILRHLLVQICMRQHQQKVW*LSRWKR Trigger: TCTTTTCCATCGGGACAGCAACCAGACCTTCTGCTG...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS TCA 90 bp | CTCTTGTTTTCCTTAGTTTCACTGCGTGGAGATTCATCGCAAACATaGCACTTGAACACTTGCTTGTACGCCTTCCGGAAGTTTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLFSLVSLRGDSSQT*HLNTCLYAFRKFSE Trigger: CTCAGAAAACTTCCGGAAGGCGTACAAGCAAGTGTTCAAGTGTCATGTTTGCGATGAATCTCCACGCAGTGAAACTAAGGAAAACAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | CTCTGTGTGTCTCTATTCTCCCACAGGATACTTTTGTCTTCGTTCATTCTGAATCACTTGAACACTTGCTaGTACGCCTTCCGGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LCVSLFSHRILLSSFILNHLNTC*YAFRKF Trigger: AAACTTCCGGAAGGCGTACAAGCAAGTGTTCAAGTG...ATTCAGAATGAACGAAGACAAAAGTATCCTGTGGGAGAATAGAGACACACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS-3UTR CAA 90 bp | TTGGGGAAAACAATCCTTAGACATTTGTTGGTACAAATCTGCATGAGGCAGCATATGACACTTGAACACTaGCTTGTACGCCTTCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: LGKTILRHLLVQICMRQHMTLEH*LVRLPE Trigger: TTCCGGAAGGCGTACAAGCAAGTGTTCAAGTGTCAT...ATGCTGCCTCATGCAGATTTGTACCAACAAATGTCTAAGGATTGTTTTCCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | GCCGAAGAGCGGCCTGGACTCCGGGGCTGGCGGCTCTaGGTCGCTCCCATTCCCTTCACTGAGGTTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: AEERPGLRGWRL*VAPIPFTEVHH Trigger: ATGGTGAACCTCAGTGAAGGGAATGGGAGCGACCCAGAGCCGCCAGCCCCGGAGTCCAGGCCGCTCTTCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | AGGCGCCCAGCACCCAGGTGGGCAGTGCATACACGGTaGCCTGAAAAGGGATGCAGAAGAGCAGGTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RRPAPRWAVHTR*PEKGCRRAGRP Trigger: TGGCCTACCTGCTCTTCTGCATCCCTTTTCAGGCCACCGTGTATGCACTGCCCACCTGGGTGCTGGGCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS GCA 72 bp | GCTTGTTGGGCCACTGCTCCCAGCAGAAGGTCTGGTTaGTGTCCCGATGGAAAAGACGCTGGTGGTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ACWATAPSRRSG*CPDGKDAGGRP Trigger: TGGCCTACCACCAGCGTCTTTTCCATCGGGACAGCAACCAGACCTTCTGCTGGGAGCAGTGGCCCAACAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CAA 72 bp | GCCAGGTCTGCGATGCTCAGATTGAGGATAAACAGGTaGGTGGTGCTGCGCGGCTTGCCTGGTTTGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARSAMLRLRINR*VVLRGLPGLLR Trigger: GCGCAGCAAACCAGGCAAGCCGCGCAGCACCACCAACCTGTTTATCCTCAATCTGAGCATCGCAGACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS GCA 72 bp | AGGTGGGCAGTGCATACACGGTGGCCTGAAAAGGGATaGAGAAGAGCAGGTAGGCCAGGTCTGCGATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RWAVHTRWPEKG*RRAGRPGLRCS Trigger: TGAGCATCGCAGACCTGGCCTACCTGCTCTTCTGCATCCCTTTTCAGGCCACCGTGTATGCACTGCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | GGCGGTGATTCTGAAGAAGAAGGAAGCTGGCGTCAGTaGGAAGGCTCCAAACTCAGCCCAGAGGTGGACGAC | + |
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Preference number: 6 (lower is better) Translates to: GGDSEEEGSWRQ*EGSKLSPEVDD Trigger: GTCGTCCACCTCTGGGCTGAGTTTGGAGCCTTCCCACTGACGCCAGCTTCCTTCTTCTTCAGAATCACCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | CAGGCAATGGGCGGTGATTCTGAAGAAGAAGGAAGCTaGCGTCAGTGGGAAGGCTCCAAACTCAGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QAMGGDSEEEGS*RQWEGSKLSPE Trigger: CTCTGGGCTGAGTTTGGAGCCTTCCCACTGACGCCAGCTTCCTTCTTCTTCAGAATCACCGCCCATTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS TCA 72 bp | GGGAAGGCTCCAAACTCAGCCCAGAGGTGGACGACATaGTGGGGCAGCCAGGATATGCCAAATACTACAACG | + |
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Preference number: 6 (lower is better) Translates to: GKAPNSAQRWTT*WGSQDMPNTTT Trigger: CGTTGTAGTATTTGGCATATCCTGGCTGCCCCATCATGTCGTCCACCTCTGGGCTGAGTTTGGAGCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | AAGTGCACACCACGTAAGCCTTCTTGTGGAGCTTGTTaGGCCACTGCTCCCAGCAGAAGGTCTGGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KCTPRKPSCGAC*ATAPSRRSGCC Trigger: ACAGCAACCAGACCTTCTGCTGGGAGCAGTGGCCCAACAAGCTCCACAAGAAGGCTTACGTGGTGTGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS TCA 72 bp | TCCTTAGTTTCACTGCGTGGAGATTCATCGCAAACATaGCACTTGAACACTTGCTTGTACGCCTTCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLVSLRGDSSQT*HLNTCLYAFRK Trigger: CTTCCGGAAGGCGTACAAGCAAGTGTTCAAGTGTCATGTTTGCGATGAATCTCCACGCAGTGAAACTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS TCA 72 bp | TTTCACTGCGTGGAGATTCATCGCAAACATGACACTTaGACACTTGCTTGTACGCCTTCCGGAAGTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FHCVEIHRKHDT*TLACTPSGSFL Trigger: CAGAAAACTTCCGGAAGGCGTACAAGCAAGTGTTCAAGTGTCATGTTTGCGATGAATCTCCACGCAGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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| CDS CCA 72 bp | GTCCATCCGGCTCTTGTTTTCCTTAGTTTCACTGCGTaGAGATTCATCGCAAACATGACACTTGAACACTTG | + |
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Preference number: 6 (lower is better) Translates to: VHPALVFLSFTA*RFIANMTLEHL Trigger: CAAGTGTTCAAGTGTCATGTTTGCGATGAATCTCCACGCAGTGAAACTAAGGAAAACAAGAGCCGGATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065224.8 |
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