Pregenerated sensors for GALNTL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096914Ensembl transcript IDs: ENSMUST00000098757.4, ENSMUST00000146513.8, ENSMUST00000203398.2, ENSMUST00000204067.3, ENSMUST00000204128.3
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCCAGCAAGGGAACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTaGGGTTCTCAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: WPARELLVSVLRSSW*GSQPSSSDVGTSPG Trigger: TCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGTTCCCTTGCTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR CCA 90 bp | AGCCTATGTCAACATGGCCTTTACACATCGTTCAACCAGGCTTCCTaGGATCTAGGAAATGTTTCTCCTGACTCCTTTGACCCAGACGCC | + |
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Preference number: 1 (lower is better) Translates to: SLCQHGLYTSFNQAS*DLGNVSPDSFDPDA Trigger: GGCGTCTGGGTCAAAGGAGTCAGGAGAAACATTTCCTAGATCCCAGGAAGCCTGGTTGAACGATGTGTAAAGGCCATGTTGACATAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR CCA 90 bp | CTGGTGAGGTTCTCAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTaGACAGCCTATGTCAACATGGCCTTTACACATCGTTCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: LVRFSAKFFRCRNVS*TAYVNMAFTHRSTR Trigger: CCTGGTTGAACGATGTGTAAAGGCCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTGAGAACCTCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR CCA 90 bp | AGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATaGCCTTTACACATCGTTCAACCAGGCTTCCTGGGATCTAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSDVGTSPGQPMST*PLHIVQPGFLGSRK Trigger: TTTCCTAGATCCCAGGAAGCCTGGTTGAACGATGTGTAAAGGCCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR GCA 90 bp | GTTTTCCATGTTCACCTTTCCCTGAGCGCAAAGCATCTCTCTGAATaGTCTCATAGTCATGCCAGTCTTTTCTTCTCAGACCATCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VFHVHLSLSAKHLSE*SHSHASLFFSDHLS Trigger: GGACAGATGGTCTGAGAAGAAAAGACTGGCATGACTATGAGAGCATTCAGAGAGATGCTTTGCGCTCAGGGAAAGGTGAACATGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR TCA 90 bp | ATTATACTGTGTATGGTCCGCAAGAGTGAGGTCCAACCTTCGTTGTaGAATGGGATAATGATGCTGGTGTTTGGCAGCCTTTCAAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: IILCMVRKSEVQPSL*NGIMMLVFGSLSRY Trigger: GTACCTTGAAAGGCTGCCAAACACCAGCATCATTATCCCATTTCACAACGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR TCA 90 bp | ACTCTCTGGTGTTCGGTTGATTATACTGTGTATGGTCCGCAAGAGTaGGGTCCAACCTTCGTTGTGAAATGGGATAATGATGCTGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TLWCSVDYTVYGPQE*GPTFVVKWDNDAGV Trigger: AACACCAGCATCATTATCCCATTTCACAACGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACACCAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR CCA 90 bp | TTACCATCCCTCATTTTAGGAAAAGAATCTATGGGCACTCGACCATaGACTTCTCAAAGGATGTTACTTCCAGGAGCAATAGTCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LPSLILGKESMGTRP*TSQRMLLPGAIVFL Trigger: CAGAAAGACTATTGCTCCTGGAAGTAACATCCTTTGAGAAGTCCATGGTCGAGTGCCCATAGATTCTTTTCCTAAAATGAGGGATGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR TCA 90 bp | TTAATAGGATCCATTCATAGCTACTCACTACTGCAGGATTTGACCTaGGAAATGCTAGGATTGATTAACTCAGCAGTCGAGATGAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LIGSIHSYSLLQDLT*EMLGLINSAVEMKV Trigger: GACTTTCATCTCGACTGCTGAGTTAATCAATCCTAGCATTTCTCAGGTCAAATCCTGCAGTAGTGAGTAGCTATGAATGGATCCTATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR TCA 90 bp | CTGTGTTCTTCACTAAAATGCTGCAGTACTTACGATAGGGCCAATTaGGTTAGCCATGACTATAGCATCCTAAGAGATAATTACAAATCT | + |
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Preference number: 1 (lower is better) Translates to: LCSSLKCCSTYDRAN*VSHDYSILRDNYKS Trigger: AGATTTGTAATTATCTCTTAGGATGCTATAGTCATGGCTAACTCAATTGGCCCTATCGTAAGTACTGCAGCATTTTAGTGAAGAACACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR TCA 90 bp | CACAGAAGCCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTaGAAAAGTATGAACCACACACTTAGTTCCCAATTGTTTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: HRSQYIIIAKVLIQS*KSMNHTLSSQLFYS Trigger: GCTGTAAAACAATTGGGAACTAAGTGTGTGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGGCTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAGTGGTAGCCTCAGGTTaGCAGAGCAGTCATGCGCTC | + |
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Preference number: 2 (lower is better) Translates to: QRIAPKSTAHPLSVASSRVVASG*QSSHAL Trigger: GAGCGCATGACTGCTCTGGCAACCTGAGGCTACCAC...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGAGTGAGGTGTCCAGGTaGAAAACCCCACCAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QASKRLTFSGIGSISSSVSEVSR*KTPPEA Trigger: AGCTTCTGGTGGGGTTTTTCACCTGGACACCTCACT...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCTGTAGGAACGTCTCCTaGACAGCCTATGTCAACATG | + |
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Preference number: 2 (lower is better) Translates to: TASLGSQKQLVRFSAKFFCRNVS*TAYVNM Trigger: CATGTTGACATAGGCTGTCCAGGAGACGTTCCTACA...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR GCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCGTGGTAGCCTCAGGTTaGCAGAGCAGTCATGCGCTC | + |
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Preference number: 2 (lower is better) Translates to: LNLLNPLLVRELHQRVQLVVASG*QSSHAL Trigger: GAGCGCATGACTGCTCTGGCAACCTGAGGCTACCAC...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGTGTAGGAACGTCTCCTaGACAGCCTATGTCAACATG | + |
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Preference number: 2 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVCRNVS*TAYVNM Trigger: CATGTTGACATAGGCTGTCCAGGAGACGTTCCTACA...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGATGTAGGAACGTCTCCTaGACAGCCTATGTCAACATG | + |
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Preference number: 2 (lower is better) Translates to: QRIAPKSTAHPLSVASSRCRNVS*TAYVNM Trigger: CATGTTGACATAGGCTGTCCAGGAGACGTTCCTACA...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGAGTAATCTTTACCCTTaGCCAGCAAGGGAACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVSNLYP*PARELL Trigger: TAGCAGTTCCCTTGCTGGCCAAGGGTAAAGATTACT...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTCGGTTGATTATACTGTGTATGGTCCGCAAGAGTGAGGTCCAACCTTCGGTCCTCTTCAGTAAGTaGGTATGGTTTTCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: GVRLIILCMVRKSEVQPSVLFSK*VWFSMF Trigger: GAACATGGAAAACCATACCCACTTACTGAAGAGGAC...CGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR CAA 90 bp | TCATCGACTAGAATGATTTCTGCTATCAGACTCTCTGGTGTTCGGTaGATTATACTGTGTATGGTCCGCAAGAGTGAGGTCCAACCTTCG | + |
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Preference number: 2 (lower is better) Translates to: SSTRMISAIRLSGVR*IILCMVRKSEVQPS Trigger: CGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACACCAGAGAGTCTGATAGCAGAAATCATTCTAGTCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGAATGACTGGGCATTTTaGGAGAAGTACAGGATTCTT | + |
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Preference number: 2 (lower is better) Translates to: QASKRLTFSGIGSISSSVNDWAF*EKYRIL Trigger: AAGAATCCTGTACTTCTCTCAAAATGCCCAGTCATT...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | CAACCGCAGATAAAACGTTACCAGTGCAGCTTACCTCTATCACTGAAGTCATCGAATGATGCTGGTGTTTaGCAGCCTTTCAAGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: QPQIKRYQCSLPLSLKSSNDAGV*QPFKVH Trigger: ATGTACCTTGAAAGGCTGCCAAACACCAGCATCATT...CGATGACTTCAGTGATAGAGGTAAGCTGCACTGGTAACGTTTTATCTGCGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR TCA 90 bp | ATTACAACCGCAGATAAAACGTTACCAGTGCAGCTTACCTCTATCACTGAAGTCTCTCTGGTGTTCGGTTaGTTATACTGTGTATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ITTADKTLPVQLTSITEVSLVFG*LYCVWS Trigger: GGACCATACACAGTATAATCAACCGAACACCAGAGA...GACTTCAGTGATAGAGGTAAGCTGCACTGGTAACGTTTTATCTGCGGTTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGTGTTCTTCACTAAAATaGTGCAGTACTTACGATAGG | + |
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Preference number: 2 (lower is better) Translates to: QASKRLTFSGIGSISSSVCSSLK*CSTYDR Trigger: CCTATCGTAAGTACTGCAGCATTTTAGTGAAGAACA...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCAGTAATCTTTACCCTTaGCCAGCAAGGGAACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LNLLNPLLVRELHQRVQLSNLYP*PARELL Trigger: TAGCAGTTCCCTTGCTGGCCAAGGGTAAAGATTACT...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR GCA 90 bp | ATTACAACCGCAGATAAAACGTTACCAGTGCAGCTTACCTCTATCACTGAAGTCAGACTGCAGAGGACATaGAGAGATCTTCTAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: ITTADKTLPVQLTSITEVRLQRT*RDLLMN Trigger: GTTCATTAGAAGATCTCTGCATGTCCTCTGCAGTCT...GACTTCAGTGATAGAGGTAAGCTGCACTGGTAACGTTTTATCTGCGGTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTATGTGGGAGTGTTTGTaGTATTCTGTTGCTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HLYVPCVHTINDWLIVGSMWECL*YSVASE Trigger: CTCAGAAGCAACAGAATATCACAAACACTCCCACAT...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTTGTATCTTCCTGTCCTaGACTTCAGTGATCTATGTC | + |
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Preference number: 2 (lower is better) Translates to: HLYVPCVHTINDWLIVGSCIFLS*TSVIYV Trigger: GACATAGATCACTGAAGTTCAGGACAGGAAGATACA...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCAGAGACCGATCTTGATTaGTCACTGTGTTCTTCACTA | + |
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Preference number: 2 (lower is better) Translates to: PVYHYCQGTHPILKKYEPETDLD*SLCSSL Trigger: TAGTGAAGAACACAGTGATCAATCAAGATCGGTCTC...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR CAA 90 bp | TTACTTCCAGGAGCAATAGTCTTTCTGAGGACTCTTCTATCCTTCTaGCTAATTCAAAGGGCAAACCTATATAGTTTTATGCTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LLPGAIVFLRTLLSF*LIQRANLYSFMLAF Trigger: AAAAGCAAGCATAAAACTATATAGGTTTGCCCTTTGAATTAGCAAGAAGGATAGAAGAGTCCTCAGAAAGACTATTGCTCCTGGAAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CAA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGTGTGGTAGCCTCAGGTaGCCAGAGCAGTCATGCGCT | + |
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Preference number: 3 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVCGSLR*PEQSCA Trigger: AGCGCATGACTGCTCTGGCAACCTGAGGCTACCACA...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR GCA 72 bp | TTCCAGTGTGCTTTAATGGGCAGTGCTCTGCCCTCTTaGTTAGGGGCCCTCTCCAGGCTCTACTACATTTGT | + |
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Preference number: 3 (lower is better) Translates to: FQCALMGSALPS*LGALSRLYYIC Trigger: ACAAATGTAGTAGAGCCTGGAGAGGGCCCCTAAGCAAGAGGGCAGAGCACTGCCCATTAAAGCACACTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCTTTCTCCTGACTCCTTaGACCCAGACGCCTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: TASLGSQKQLVRFSAKFFFLLTP*TQTPAT Trigger: TGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAGAAA...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR TCA 72 bp | AGGGAACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTaGGGTTCTCAGCCAAGTTCTTCAGATGTAGGAACG | + |
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Preference number: 3 (lower is better) Translates to: RELLVSVLRSSW*GSQPSSSDVGT Trigger: CGTTCCTACATCTGAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGATTTCTCCTGACTCCTTaGACCCAGACGCCTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: QRIAPKSTAHPLSVASSRFLLTP*TQTPAT Trigger: TGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAGAAA...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR TCA 72 bp | TGTATGGTCCGCAAGAGTGAGGTCCAACCTTCGTTGTaGAATGGGATAATGATGCTGGTGTTTGGCAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: CMVRKSEVQPSL*NGIMMLVFGSL Trigger: AAGGCTGCCAAACACCAGCATCATTATCCCATTTCACAACGAAGGTTGGACCTCACTCTTGCGGACCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR CCA 72 bp | AGCCTTTCAAGGTACATCTTGTGCTTACAGTTGGCATaGCGGATGTCTGGCAGAGACCTCTCTAGAGCAATA | + |
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Preference number: 3 (lower is better) Translates to: SLSRYILCLQLA*RMSGRDLSRAI Trigger: TATTGCTCTAGAGAGGTCTCTGCCAGACATCCGCCATGCCAACTGTAAGCACAAGATGTACCTTGAAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGTTCGGTTGATTATACTGTGTATGGTCCGCAAGAGTGAGGTCCAACCTTCGGTCTGTAGATGTCATTaGCCAAATAAGCTAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: GVRLIILCMVRKSEVQPSVCRCH*PNKLAC Trigger: GCATGCTAGCTTATTTGGCAAATGACATCTACAGAC...CGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR-3UTR CAA 90 bp | TTACAACCGCAGATAAAACGTTACCAGTGCAGCTTACCTCTATCACTGAAGTCAATCTTGTGCTTACAGTaGGCATGGCGGATGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LQPQIKRYQCSLPLSLKSILCLQ*AWRMSG Trigger: GCCAGACATCCGCCATGCCAACTGTAAGCACAAGAT...TGACTTCAGTGATAGAGGTAAGCTGCACTGGTAACGTTTTATCTGCGGTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR TCA 72 bp | GCTGACAAAAATGTTGAAGCCATTTTCCCTGTAAGCTaGGTCATCCCGGTCCTCTTCAGTAAGTGGGTATGG | + |
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Preference number: 3 (lower is better) Translates to: ADKNVEAIFPVS*VIPVLFSKWVW Trigger: CCATACCCACTTACTGAAGAGGACCGGGATGACTCAGCTTACAGGGAAAATGGCTTCAACATTTTTGTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR GCA 72 bp | GTTCACCTTTCCCTGAGCGCAAAGCATCTCTCTGAATaGTCTCATAGTCATGCCAGTCTTTTCTTCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: VHLSLSAKHLSE*SHSHASLFFSD Trigger: GTCTGAGAAGAAAAGACTGGCATGACTATGAGAGCATTCAGAGAGATGCTTTGCGCTCAGGGAAAGGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| 3UTR CCA 72 bp | CAACATGGCCTTTACACATCGTTCAACCAGGCTTCCTaGGATCTAGGAAATGTTTCTCCTGACTCCTTTGAC | + |
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Preference number: 3 (lower is better) Translates to: QHGLYTSFNQAS*DLGNVSPDSFD Trigger: GTCAAAGGAGTCAGGAGAAACATTTCCTAGATCCCAGGAAGCCTGGTTGAACGATGTGTAAAGGCCATGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR CCA 72 bp | TTCTCAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTaGACAGCCTATGTCAACATGGCCTTTACACATCGT | + |
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Preference number: 3 (lower is better) Translates to: FSAKFFRCRNVS*TAYVNMAFTHR Trigger: ACGATGTGTAAAGGCCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| 3UTR-3UTR CAA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTTTTCTCCTGACTCCTTaGACCCAGACGCCTGCAACA | + |
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Preference number: 3 (lower is better) Translates to: HLYVPCVHTINDWLIVGSFLLTP*TQTPAT Trigger: TGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAGAAA...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| 3UTR-3UTR CAA 90 bp | TATAGGAATGACCTGTACTCAAAACAGATGGAGCATGTATATCAAATGATTCCCTGTGGTAGCCTCAGGTaGCCAGAGCAGTCATGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: YRNDLYSKQMEHVYQMIPCGSLR*PEQSCA Trigger: AGCGCATGACTGCTCTGGCAACCTGAGGCTACCACA...GGGAATCATTTGATATACATGCTCCATCTGTTTTGAGTACAGGTCATTCCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | AGTAAGTGGGTATGGTTTTCCATGTTCACCTTTCCCTaGGCGCAAAGCATCTCTCTGAATGCTCTCATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SKWVWFSMFTFP*AQSISLNALIV Trigger: GACTATGAGAGCATTCAGAGAGATGCTTTGCGCTCAGGGAAAGGTGAACATGGAAAACCATACCCACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
||
| 3UTR TCA 72 bp | CATCTTAGTCCCCAGCCAGATTGGTCTCGGATCATTTaGGAGATAAATCCTTCCTCACACCTTAGACATGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSPQPDWSRII*EINPSSHLRHV Trigger: AACATGTCTAAGGTGTGAGGAAGGATTTATCTCTCAAATGATCCGAGACCAATCTGGCTGGGGACTAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | TGTTCGGTTGATTATACTGTGTATGGTCCGCAAGAGTaGGGTCCAACCTTCGTTGTGAAATGGGATAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: CSVDYTVYGPQE*GPTFVVKWDND Trigger: ATCATTATCCCATTTCACAACGAAGGTTGGACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
||
| 3UTR CCA 72 bp | CTCATTTTAGGAAAAGAATCTATGGGCACTCGACCATaGACTTCTCAAAGGATGTTACTTCCAGGAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: LILGKESMGTRP*TSQRMLLPGAI Trigger: TATTGCTCCTGGAAGTAACATCCTTTGAGAAGTCCATGGTCGAGTGCCCATAGATTCTTTTCCTAAAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCAGGGCACAACCCAAGATaGTGTCTTTGGTACAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: PVYHYCQGTHPILKKYEPGHNPR*CLWYNC Trigger: ACAATTGTACCAAAGACACAATCTTGGGTTGTGCCC...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | TTCTCCACTATGCATCTTCGCTGTTTCGAGATCACTTaGCATATACAAAAGATCTCAGTGACAATCCGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FSTMHLRCFEIT*HIQKISVTIRL Trigger: TAAACGGATTGTCACTGAGATCTTTTGTATATGTCAAGTGATCTCGAAACAGCGAAGATGCATAGTGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | TCACTAAAATGCTGCAGTACTTACGATAGGGCCAATTaGGTTAGCCATGACTATAGCATCCTAAGAGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLKCCSTYDRAN*VSHDYSILRDN Trigger: ATTATCTCTTAGGATGCTATAGTCATGGCTAACTCAATTGGCCCTATCGTAAGTACTGCAGCATTTTAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCACTGTTTCGAGATCACTaGACATATACAAAAGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVYHYCQGTHPILKKYEPLFRDH*TYTKDL Trigger: GAGATCTTTTGTATATGTCAAGTGATCTCGAAACAG...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | TTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATaGACCACACACTTAGTTCCCAATTGTTTTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPRYSSNLEKV*TTHLVPNCFTA Trigger: TGCTGTAAAACAATTGGGAACTAAGTGTGTGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR TCA 72 bp | ACAGACTCTTGTGTATCTTCCTGTCCTGAACTTCAGTaGTCTATGTCCAAAATGTTAGATGTATATCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TDSCVSSCPELQ*SMSKMLDVYLF Trigger: AAAAAGATATACATCTAACATTTTGGACATAGATCACTGAAGTTCAGGACAGGAAGATACACAAGAGTCTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGGACAGTCATAGAGGGTaGCAGGGCTGCTGTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTPLTQTPATTQFTTCRDSHRG*QGCCVR Trigger: TCTCACACAGCAGCCCTGTCACCCTCTATGACTGTC...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCCAGAGATGTCTCCGGTaGAGAGGTGCCTGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVAQRCLR*RGACTL Trigger: CAGAGTACAGGCACCTCTCCACCGGAGACATCTCTG...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| 3UTR CAA 72 bp | CTTCCAGTGTGCTTTAATGGGCAGTGCTCTGCCCTCTaGCTTAGGGGCCCTCTCCAGGCTCTACTACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVCFNGQCSAL*LRGPLQALLHL Trigger: CAAATGTAGTAGAGCCTGGAGAGGGCCCCTAAGCAAGAGGGCAGAGCACTGCCCATTAAAGCACACTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGGAGTCGGGTCCGGATaGGACCTTCCCTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWGVGSG*DLPFSW Trigger: CCAAGAAAAGGGAAGGTCTCATCCGGACCCGACTCC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGTATGGTCCGCAAGAGTaGGGTCCAACCTTCGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTPLTQTPATTQFTTCRYGPQE*GPTFVV Trigger: CACAACGAAGGTTGGACCTCACTCTTGCGGACCATA...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCAGCCCTCTGCAGCTCTaGAGGGATCGGGATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVASPLQL*RDRDSF Trigger: AAAAGAATCCCGATCCCTCCAGAGCTGCAGAGGGCT...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCCCAGATTTCCAAGCCTaGGTCATAGCCACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVAPDFQA*VIATQF Trigger: GAACTGGGTGGCTATGACCCAGGCTTGGAAATCTGG...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGGGCATCCCCAGCTTGTaGCTCATACCCAAAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLTPLTQTPATTQFTTCRGIPSL*LIPKVI Trigger: AATCACTTTGGGTATGAGGCACAAGCTGGGGATGCC...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCGTCCCTGTGGCTCCATaGTTGCTATCCACACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVAVPVAP*LLSTHK Trigger: CTTATGTGTGGATAGCAAGCATGGAGCCACAGGGAC...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCACATTGACCTCACAGTaGGAGTCTAGGAAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVATLTSQ*ESRKVS Trigger: GCTGACCTTCCTAGACTCCCACTGTGAGGTCAATGT...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTGGAGTCGGGTCCGGATaGGACCTTCCCTTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLGVGSG*DLPFSW Trigger: CCAAGAAAAGGGAAGGTCTCATCCGGACCCGACTCC...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACAGAATTTTCGGGTGTaGAGAGGCTCACCGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRQNFRV*RGSPGR Trigger: TCGACCCGGTGAGCCTCTGCACACCCGAAAATTCTG...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGAGGTGCCTGTACTCTaGCCGCCTCTGGTAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWEVPVL*PPLVNV Trigger: TACATTTACCAGAGGCGGCCAGAGTACAGGCACCTC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACAGAGATGTCTCCGGTaGAGAGGTGCCTGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRQRCLR*RGACTL Trigger: CAGAGTACAGGCACCTCTCCACCGGAGACATCTCTG...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCGCCTCATACCCAAAGTaGTTGTGGTCAATGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: TASLGSQKQLVRFSAKFFASYPK*LWSMTS Trigger: CGATGTCATTGACCACAATCACTTTGGGTATGAGGC...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTGACAGTCATAGAGGGTaGCAGGGCTGCTGTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLDSHRG*QGCCVR Trigger: TCTCACACAGCAGCCCTGTCACCCTCTATGACTGTC...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGTCCCTGTGGCTCCATaGTTGCTATCCACACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWVPVAP*LLSTHK Trigger: CTTATGTGTGGATAGCAAGCATGGAGCCACAGGGAC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAAGCCCTCTGCAGCTCTaGAGGGATCGGGATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRSPLQL*RDRDSF Trigger: AAAAGAATCCCGATCCCTCCAGAGCTGCAGAGGGCT...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTTTCCGCAACTCCTTCTaGGCAGAGATGTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLFRNSF*AEMSPV Trigger: CACCGGAGACATCTCTGCCCAGAAGGAGTTGCGGAA...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTGCAGCCAGTTCACATTaGCCTCACAGTGGGAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLAASSH*PHSGSL Trigger: TAGACTCCCACTGTGAGGTCAATGTGAACTGGCTGC...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCCTCATACCCAAAGTaGTTGTGGTCAATGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVASYPK*LWSMTS Trigger: CGATGTCATTGACCACAATCACTTTGGGTATGAGGC...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCTCTCTGGTGTTCGGTTaGTTATACTGTGTATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TASLGSQKQLVRFSAKFFSLVFG*LYCVWS Trigger: GGACCATACACAGTATAATCAACCGAACACCAGAGA...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGCTTCCCTTTTCTTGGTaGGTACAATTCTCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTPLTQTPATTQFTTCRLPFSW*VQFSLW Trigger: CCAAAGTGAGAATTGTACGCACCAAGAAAAGGGAAG...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAGGCATCCCCAGCTTGTaGCTCATACCCAAAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRGIPSL*LIPKVI Trigger: AATCACTTTGGGTATGAGGCACAAGCTGGGGATGCC...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTTGGTTTAGTGCAATTTaGTTGAGGAGCGGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLWFSAI*LRSGGS Trigger: GCTGCCCCCGCTCCTCAACCAAATTGCACTAAACCA...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGGGCTGCTGTGTGAGATaGCATCCAGGCAGAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QASKRLTFSGIGSISSSVGCCVR*HPGRIF Trigger: GAAAATTCTGCCTGGATGCCATCTCACACAGCAGCC...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCTCAAAAATCCATTGCTaGGTCTCAGATAGAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TASLGSQKQLVRFSAKFFSKIHC*VSDRGS Trigger: TGACCCTCTATCTGAGACTCAGCAATGGATTTTTGA...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGTCCAACCTTCGTTGTaGAATGGGATAATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVVQPSL*NGIMML Trigger: CAGCATCATTATCCCATTTCACAACGAAGGTTGGAC...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTCCACTTTCGATCCACTaGAAAGAGACCTCCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLPLSIH*KETSSH Trigger: ATGGCTGGAGGTCTCTTTGCAGTGGATCGAAAGTGG...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTACATTGACCTCACAGTaGGAGTCTAGGAAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLTLTSQ*ESRKVS Trigger: GCTGACCTTCCTAGACTCCCACTGTGAGGTCAATGT...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGCACACGATGGTTTTGTaGTTTAGTGCAATTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTPLTQTPATTQFTTCRHTMVL*FSAIWL Trigger: CAACCAAATTGCACTAAACCACAAAACCATCGTGTG...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCTCATGGGACACACGATaGTTTTGTGGTTTAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TASLGSQKQLVRFSAKFFSWDTR*FCGLVQ Trigger: TTGCACTAAACCACAAAACCATCGTGTGTCCCATGA...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTGGCTGCTGTGTGAGATaGCATCCAGGCAGAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLGCCVR*HPGRIF Trigger: GAAAATTCTGCCTGGATGCCATCTCACACAGCAGCC...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACCTGTGGTAGCCTGCTATCAGACTCTCTaGTGTTCGGTTGATTATACT | + |
|
Preference number: 4 (lower is better) Translates to: PKSTAHPLSVASSRPVVACYQTL*CSVDYT Trigger: AGTATAATCAACCGAACACCAGAGAGTCTGATAGCA...GGCTACCACAGGTCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAAGTGATTGTGGTCAATaGCATCGATCATGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRSDCGQ*HRSWDT Trigger: TGTGTCCCATGATCGATGTCATTGACCACAATCACT...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGAAAATCTTCTTCTCTaGGGGGTTGCAATCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWENLLL*GVAIHT Trigger: TGTATGGATTGCAACCCCTCAGAGAAGAAGATTTTC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGTCAAAAATCCATTGCTaGGTCTCAGATAGAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWSKIHC*VSDRGS Trigger: TGACCCTCTATCTGAGACTCAGCAATGGATTTTTGA...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGCTTCCCTTTTCTTGGTaGGTACAATTCTCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWLPFSW*VQFSLW Trigger: CCAAAGTGAGAATTGTACGCACCAAGAAAAGGGAAG...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCGCTGGTTCCCTTTCATaGCGTGACAGTCATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLNPLLVRELHQRVQLAGSLS*RDSHRG Trigger: CCCTCTATGACTGTCACGGCATGAAAGGGAACCAGC...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGTCATGGGACACACGATaGTTTTGTGGTTTAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVSWDTR*FCGLVQ Trigger: TTGCACTAAACCACAAAACCATCGTGTGTCCCATGA...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTGCAGCCAGTTCACATTaGCCTCACAGTGGGAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLYVPCVHTINDWLIVGSAASSH*PHSGSL Trigger: TAGACTCCCACTGTGAGGTCAATGTGAACTGGCTGC...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCATTTTCCCTGTAAGCTaGGTCATCCCGGTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLLNPLLVRELHQRVQLIFPVS*VIPVLF Trigger: GAAGAGGACCGGGATGACTCAGCTTACAGGGAAAAT...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTGCTGGTTCCCTTTCATaGCGTGACAGTCATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLYVPCVHTINDWLIVGSAGSLS*RDSHRG Trigger: CCCTCTATGACTGTCACGGCATGAAAGGGAACCAGC...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGGTCCTCTTCAGTAAGTaGGTATGGTTTTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QASKRLTFSGIGSISSSVVLFSK*VWFSMF Trigger: GAACATGGAAAACCATACCCACTTACTGAAGAGGAC...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAAATGATGCTGGTGTTTaGCAGCCTTTCAAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: QRIAPKSTAHPLSVASSRNDAGV*QPFKVH Trigger: ATGTACCTTGAAAGGCTGCCAAACACCAGCATCATT...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGACCTTCGTTGTGAAATaGGATAATGATGCTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWTFVVK*DNDAGV Trigger: AACACCAGCATCATTATCCCATTTCACAACGAAGGT...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTGAAAATCTTCTTCTCTaGGGGGTTGCAATCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLENLLL*GVAIHT Trigger: TGTATGGATTGCAACCCCTCAGAGAAGAAGATTTTC...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGAATCCATACAGCTGTTaGTCACAGGATGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVNPYSC*SQDEIM Trigger: CATTATTTCATCCTGTGAGCAACAGCTGTATGGATT...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGAATCCATACAGCTGTTaGTCACAGGATGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWNPYSC*SQDEIM Trigger: CATTATTTCATCCTGTGAGCAACAGCTGTATGGATT...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGTACAATTCTCACTTTaGAAAACCGAGCCATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWVQFSL*KTEPCN Trigger: ATTACATGGCTCGGTTTTCCAAAGTGAGAATTGTAC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| 3UTR CAA 72 bp | AGAATGATTTCTGCTATCAGACTCTCTGGTGTTCGGTaGATTATACTGTGTATGGTCCGCAAGAGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RMISAIRLSGVR*IILCMVRKSEV Trigger: GACCTCACTCTTGCGGACCATACACAGTATAATCAACCGAACACCAGAGAGTCTGATAGCAGAAATCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCACAGAATTTTCGGGTGTaGAGAGGCTCACCGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PVYHYCQGTHPILKKYEPQNFRV*RGSPGR Trigger: TCGACCCGGTGAGCCTCTGCACACCCGAAAATTCTG...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCAAGTAAGCGCTTGACCTTCAGTGGTATAGGAAGCATCTCTTCCAGTGTGAATCCATACAGCTGTTaGTCACAGGATGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: QASKRLTFSGIGSISSSVNPYSC*SQDEIM Trigger: CATTATTTCATCCTGTGAGCAACAGCTGTATGGATT...CACACTGGAAGAGATGCTTCCTATACCACTGAAGGTCAAGCGCTTACTTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCATTCCGCAACTCCTTCTaGGCAGAGATGTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVYHYCQGTHPILKKYEPFRNSF*AEMSPV Trigger: CACCGGAGACATCTCTGCCCAGAAGGAGTTGCGGAA...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCTCAAAAATCCATTGCTaGGTCTCAGATAGAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNLLNPLLVRELHQRVQLSKIHC*VSDRGS Trigger: TGACCCTCTATCTGAGACTCAGCAATGGATTTTTGA...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR GCA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTAAGCATCTCTCTGAATaGTCTCATAGTCATGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLYVPCVHTINDWLIVGSKHLSE*SHSHAS Trigger: ACTGGCATGACTATGAGAGCATTCAGAGAGATGCTT...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACCTGCTTAACCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCCACACGATGGTTTTGTaGTTTAGTGCAATTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLNPLLVRELHQRVQLHTMVL*FSAIWL Trigger: CAACCAAATTGCACTAAACCACAAAACCATCGTGTG...GAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGCAGGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR TCA 90 bp | TATAGGAATGACCTGTACTCAAAACAGATGGAGCATGTATATCAAATGATTCCCGAAAATCTTCTTCTCTaGGGGGTTGCAATCCATACA | + |
|
Preference number: 4 (lower is better) Translates to: YRNDLYSKQMEHVYQMIPENLLL*GVAIHT Trigger: TGTATGGATTGCAACCCCTCAGAGAAGAAGATTTTC...GGGAATCATTTGATATACATGCTCCATCTGTTTTGAGTACAGGTCATTCCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR CAA 72 bp | TTTCTCCACTATGCATCTTCGCTGTTTCGAGATCACTaGACATATACAAAAGATCTCAGTGACAATCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLHYASSLFRDH*TYTKDLSDNPF Trigger: AAACGGATTGTCACTGAGATCTTTTGTATATGTCAAGTGATCTCGAAACAGCGAAGATGCATAGTGGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| 3UTR CAA 72 bp | GGAGCAATAGTCTTTCTGAGGACTCTTCTATCCTTCTaGCTAATTCAAAGGGCAAACCTATATAGTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: GAIVFLRTLLSF*LIQRANLYSFM Trigger: CATAAAACTATATAGGTTTGCCCTTTGAATTAGCAAGAAGGATAGAAGAGTCCTCAGAAAGACTATTGCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CCA 90 bp | TATAGGAATGACCTGTACTCAAAACAGATGGAGCATGTATATCAAATGATTCCCGTACAATTCTCACTTTaGAAAACCGAGCCATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRNDLYSKQMEHVYQMIPVQFSL*KTEPCN Trigger: ATTACATGGCTCGGTTTTCCAAAGTGAGAATTGTAC...GGGAATCATTTGATATACATGCTCCATCTGTTTTGAGTACAGGTCATTCCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS CCA 90 bp | AACCACTTGAAGTCTTTGCACTTGAGTCGCTTCCGCAACTCCTTCTaGGCAGAGATGTCTCCGGTGGAGAGGTGCCTGTACTCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NHLKSLHLSRFRNSF*AEMSPVERCLYSGR Trigger: GCGGCCAGAGTACAGGCACCTCTCCACCGGAGACATCTCTGCCCAGAAGGAGTTGCGGAAGCGACTCAAGTGCAAAGACTTCAAGTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS TCA 90 bp | ATCCCCAGAGCTGGTTCCCTTTCATGCCGTGACAGTCATAGAGGGTaGCAGGGCTGCTGTGTGAGATGGCATCCAGGCAGAATTTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPRAGSLSCRDSHRG*QGCCVRWHPGRIFG Trigger: CCCGAAAATTCTGCCTGGATGCCATCTCACACAGCAGCCCTGTCACCCTCTATGACTGTCACGGCATGAAAGGGAACCAGCTCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS GCA 90 bp | TCCTTGACACAGACGTCCAGCCTGAGCTCGGTCCCTGTGGCTCCATaGTTGCTATCCACACATAAGTTGGCTGCCACACTTCGAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLTQTSSLSSVPVAP*LLSTHKLAATLRIS Trigger: TGAGATTCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGACCGAGCTCAGGCTGGACGTCTGTGTCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS GCA 90 bp | ACAGGGCTGCTGTGTGAGATGGCATCCAGGCAGAATTTTCGGGTGTaGAGAGGCTCACCGGGTCGAATATCTTCTCTCCACCCGAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLCEMASRQNFRV*RGSPGRISSLHPKV Trigger: TACTTTCGGGTGGAGAGAAGATATTCGACCCGGTGAGCCTCTGCACACCCGAAAATTCTGCCTGGATGCCATCTCACACAGCAGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CCCACTCTTAGTCAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGCACGCTTCAGGTTTCTaGCTAGGCTGGTCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PTLSQRIAPKSTAHPLSVHASGF*LGWSQM Trigger: CATCTGGGACCAGCCTAGCAAGAAACCTGAAGCGTG...CACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGCCTGTGGCTCCATGCTaGCTATCCACACATAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTPLTQTPATTQFTTCRPVAPC*LSTHKL Trigger: CAACTTATGTGTGGATAGCAAGCATGGAGCCACAGG...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGATTTAGTGCAATTTGGTaGAGGAGCGGGGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRIAPKSTAHPLSVASSRFSAIW*RSGGSQ Trigger: CTGGCTGCCCCCGCTCCTCAACCAAATTGCACTAAA...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACACGCTTCAGGTTTCTaGCTAGGCTGGTCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRIAPKSTAHPLSVASSRHASGF*LGWSQM Trigger: CATCTGGGACCAGCCTAGCAAGAAACCTGAAGCGTG...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGACTTTCAGAGCCATCCTaGACACAGACGTCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRIAPKSTAHPLSVASSRLSEPS*TQTSSL Trigger: CAGGCTGGACGTCTGTGTCAAGGATGGCTCTGAAAG...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTTTTAGTGCAATTTGGTaGAGGAGCGGGGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLFSAIW*RSGGSQ Trigger: CTGGCTGCCCCCGCTCCTCAACCAAATTGCACTAAA...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCACAACCTGTAGGGGACACACGATGGTTTaGTGGTTTAGTGCAATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTPLTQTPATTQFTTCRGHTMV*WFSAIW Trigger: CCAAATTGCACTAAACCACAAAACCATCGTGTGTCC...CCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCTGGGTCAAAGGAGTCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCAGACCTTCCCTTTTCTaGGTGCGTACAATTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TASLGSQKQLVRFSAKFFRPSLF*VRTILT Trigger: AGTGAGAATTGTACGCACCAAGAAAAGGGAAGGTCT...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGGCAGCCATGAACCACTaGAAGTCTTTGCACTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWAAMNH*KSLHLS Trigger: ACTCAAGTGCAAAGACTTCAAGTGGTTCATGGCTGC...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGTTCTTCTCTGAGGGGTaGCAATCCATACAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWFFSEG*QSIQLL Trigger: CAACAGCTGTATGGATTGCAACCCCTCAGAGAAGAA...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | TACATCTTGTGCTTACAGTTGGCATGGCGGATGTCTGGCAGAGACCTCTCTAGAGACCAGAGACCAATGTaGGGCAGGAAAATTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YILCLQLAWRMSGRDLSRDQRPM*GRKIKA Trigger: GGCTTTAATTTTCCTGCCCAACATTGGTCTCTGGTC...TCTAGAGAGGTCTCTGCCAGACATCCGCCATGCCAACTGTAAGCACAAGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
||
| CDS-3UTR CAA 90 bp | AGACGCCTGCAACAACACAGTTCACAACCTGTAGGTAATCTCTCTTCTTGCCTTATCTTGTGCTTACAGTaGGCATGGCGGATGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLQQHSSQPVGNLSSCLILCLQ*AWRMSG Trigger: GCCAGACATCCGCCATGCCAACTGTAAGCACAAGAT...AAGGCAAGAAGAGAGATTACCTACAGGTTGTGAACTGTGTTGTTGCAGGCGTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTAGTCTCGGTTCTCAGAAGCAGCTGGTGAGGTTCTCAGCCAAGTTCTTCCTCTCTGGTGTTCGGTaGATTATACTGTGTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TASLGSQKQLVRFSAKFFLSGVR*IILCMV Trigger: GACCATACACAGTATAATCAACCGAACACCAGAGAG...GAAGAACTTGGCTGAGAACCTCACCAGCTGCTTCTGAGAACCGAGACTAGCAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
||
| CDS TCA 90 bp | TGGCATCCCCAGCTTGTGCCTCATACCCAAAGTGATTGTGGTCAATaGCATCGATCATGGGACACACGATGGTTTTGTGGTTTAGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WHPQLVPHTQSDCGQ*HRSWDTRWFCGLVQ Trigger: TTGCACTAAACCACAAAACCATCGTGTGTCCCATGATCGATGTCATTGACCACAATCACTTTGGGTATGAGGCACAAGCTGGGGATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CAGCCAAGTTCTTCAGATGTAGGAACGTCTCCTGGACAGCCTATGTCAACATGGAGACCTTCCCTTTTCTaGGTGCGTACAATTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: QPSSSDVGTSPGQPMSTWRPSLF*VRTILT Trigger: AGTGAGAATTGTACGCACCAAGAAAAGGGAAGGTCT...CCATGTTGACATAGGCTGTCCAGGAGACGTTCCTACATCTGAAGAACTTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGAGCAGCCATGAACCACTaGAAGTCTTTGCACTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QRIAPKSTAHPLSVASSRAAMNH*KSLHLS Trigger: ACTCAAGTGCAAAGACTTCAAGTGGTTCATGGCTGC...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CAGAGAATTGCACCAAAGAGTACAGCTCACCCCTTAAGCGTGGCTAGTTCTAGATTCTTCTCTGAGGGGTaGCAATCCATACAGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: QRIAPKSTAHPLSVASSRFFSEG*QSIQLL Trigger: CAACAGCTGTATGGATTGCAACCCCTCAGAGAAGAA...TCTAGAACTAGCCACGCTTAAGGGGTGAGCTGTACTCTTTGGTGCAATTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| CDS TCA 90 bp | CAAAAATCCATTGCTGAGTCTCAGATAGAGGGTCACATCTGGCCATaGAAATCTTCTTCTCTGAGGGGTTGCAATCCATACAGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: QKSIAESQIEGHIWP*KSSSLRGCNPYSCC Trigger: GCAACAGCTGTATGGATTGCAACCCCTCAGAGAAGAAGATTTTCATGGCCAGATGTGACCCTCTATCTGAGACTCAGCAATGGATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCACTTTCAGAGCCATCCTaGACACAGACGTCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PVYHYCQGTHPILKKYEPLSEPS*TQTSSL Trigger: CAGGCTGGACGTCTGTGTCAAGGATGGCTCTGAAAG...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CATTTGTATGTTCCCTGTGTGCACACAATTAATGACTGGCTCATAGTTGGAAGTTTCTTCTCTGAGGGGTaGCAATCCATACAGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HLYVPCVHTINDWLIVGSFFSEG*QSIQLL Trigger: CAACAGCTGTATGGATTGCAACCCCTCAGAGAAGAA...ACTTCCAACTATGAGCCAGTCATTAATTGTGTGCACACAGGGAACATACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCACCTGTGGCTCCATGCTaGCTATCCACACATAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: PVYHYCQGTHPILKKYEPPVAPC*LSTHKL Trigger: CAACTTATGTGTGGATAGCAAGCATGGAGCCACAGG...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| CDS-3UTR CAA 90 bp | CCAGTATATCATTATTGCCAAGGTACTCATCCAATCTTGAAAAAGTATGAACCAGACCAGAGACCAATGTaGGGCAGGAAAATTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PVYHYCQGTHPILKKYEPDQRPM*GRKIKA Trigger: GGCTTTAATTTTCCTGCCCAACATTGGTCTCTGGTC...TGGTTCATACTTTTTCAAGATTGGATGAGTACCTTGGCAATAATGATATACTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204128.3 |
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| CDS CAA 90 bp | CTGAGCTCGGTCCCTGTGGCTCCATGCTTGCTATCCACACATAAGTaGGCTGCCACACTTCGAATCTCACCCCACGCTGCAGGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSSVPVAPCLLSTHK*AATLRISPHAAGRG Trigger: GCCCCTGCCTGCAGCGTGGGGTGAGATTCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGACCGAGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS GCA 72 bp | CAGACGTCCAGCCTGAGCTCGGTCCCTGTGGCTCCATaGTTGCTATCCACACATAAGTTGGCTGCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: QTSSLSSVPVAP*LLSTHKLAATL Trigger: AAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGACCGAGCTCAGGCTGGACGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | ACGTCCAGCCTGAGCTCGGTCCCTGTGGCTCCATGCTaGCTATCCACACATAAGTTGGCTGCCACACTTCGA | + |
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Preference number: 6 (lower is better) Translates to: TSSLSSVPVAPC*LSTHKLAATLR Trigger: TCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGACCGAGCTCAGGCTGGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 90 bp | TTGACACAGACGTCCAGCCTGAGCTCGGTCCCTGTGGCTCCATGCTaGCTATCCACACATAAGTTGGCTGCCACACTTCGAATCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LTQTSSLSSVPVAPC*LSTHKLAATLRISP Trigger: GGGTGAGATTCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGACCGAGCTCAGGCTGGACGTCTGTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CCA 72 bp | AAGTCTTTGCACTTGAGTCGCTTCCGCAACTCCTTCTaGGCAGAGATGTCTCCGGTGGAGAGGTGCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: KSLHLSRFRNSF*AEMSPVERCLY Trigger: GTACAGGCACCTCTCCACCGGAGACATCTCTGCCCAGAAGGAGTTGCGGAAGCGACTCAAGTGCAAAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CCA 72 bp | TCCCTGTGGCTCCATGCTTGCTATCCACACATAAGTTaGCTGCCACACTTCGAATCTCACCCCACGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLWLHACYPHIS*LPHFESHPTLQ Trigger: CTGCAGCGTGGGGTGAGATTCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | TTAGGCACGTCCCAGGCCACAGCAGCCATGAACCACTaGAAGTCTTTGCACTTGAGTCGCTTCCGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: LGTSQATAAMNH*KSLHLSRFRNS Trigger: GGAGTTGCGGAAGCGACTCAAGTGCAAAGACTTCAAGTGGTTCATGGCTGCTGTGGCCTGGGACGTGCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | GTCCCTGTGGCTCCATGCTTGCTATCCACACATAAGTaGGCTGCCACACTTCGAATCTCACCCCACGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VPVAPCLLSTHK*AATLRISPHAA Trigger: TGCAGCGTGGGGTGAGATTCGAAGTGTGGCAGCCAACTTATGTGTGGATAGCAAGCATGGAGCCACAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | CCCAGGAGTCGGGTCCGGATGAGACCTTCCCTTTTCTaGGTGCGTACAATTCTCACTTTGGAAAACCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: PRSRVRMRPSLF*VRTILTLENRA Trigger: GGCTCGGTTTTCCAAAGTGAGAATTGTACGCACCAAGAAAAGGGAAGGTCTCATCCGGACCCGACTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS GCA 72 bp | ATAGCCACCCAGTTCCCAAAACCACTTTCGATCCACTaGAAAGAGACCTCCAGCCATAACCGGAGACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: IATQFPKPLSIH*KETSSHNRRLK Trigger: TTTGAGTCTCCGGTTATGGCTGGAGGTCTCTTTGCAGTGGATCGAAAGTGGTTTTGGGAACTGGGTGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CCA 72 bp | AGGTCTCAGCCACACGCTTCAGGTTTCTTGCTAGGCTaGTCCCAGATGGAACTTTATAAGGGACATACTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSQPHASGFLLG*SQMELYKGHTS Trigger: GGAAGTATGTCCCTTATAAAGTTCCATCTGGGACCAGCCTAGCAAGAAACCTGAAGCGTGTGGCTGAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | TGGTCAATGACATCGATCATGGGACACACGATGGTTTaGTGGTTTAGTGCAATTTGGTTGAGGAGCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WSMTSIMGHTMV*WFSAIWLRSGG Trigger: GCCCCCGCTCCTCAACCAAATTGCACTAAACCACAAAACCATCGTGTGTCCCATGATCGATGTCATTGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098757.4 ENSMUST00000204128.3 |
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| CDS GCA 72 bp | TCTTCTTCTCTGAGGGGTTGCAATCCATACAGCTGTTaGTCACAGGATGAAATAATGTTCTGTCCTCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SSSLRGCNPYSC*SQDEIMFCPPG Trigger: ACCGGGAGGACAGAACATTATTTCATCCTGTGAGCAACAGCTGTATGGATTGCAACCCCTCAGAGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098757.4 ENSMUST00000204067.3 ENSMUST00000204128.3 |
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| CDS GCA 72 bp | TCAAGCCATCTGCAAGATCTGATGCTCCGCGGGTTCTaGAGATTTCACCAGGTGTTTATCCTTGTACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSHLQDLMLRGF*RFHQVFILVQR Trigger: TCTTTGTACAAGGATAAACACCTGGTGAAATCTGCAGAACCCGCGGAGCATCAGATCTTGCAGATGGCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146513.8 |
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| CDS CAA 90 bp | GATTTCACCAGGTGTTTATCCTTGTACAAAGACCAGAGACCAATGTaGGGCAGGAAAATTAAAGCCACGGTGAATAACAAAGTCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: DFTRCLSLYKDQRPM*GRKIKATVNNKVIC Trigger: GCAAATGACTTTGTTATTCACCGTGGCTTTAATTTTCCTGCCCAACATTGGTCTCTGGTCTTTGTACAAGGATAAACACCTGGTGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000146513.8 ENSMUST00000203398.2 ENSMUST00000204128.3 |
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| CDS CAA 72 bp | AGGTGTTTATCCTTGTACAAAGACCAGAGACCAATGTaGGGCAGGAAAATTAAAGCCACGGTGAATAACAAA | + |
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Preference number: 6 (lower is better) Translates to: RCLSLYKDQRPM*GRKIKATVNNK Trigger: TTTGTTATTCACCGTGGCTTTAATTTTCCTGCCCAACATTGGTCTCTGGTCTTTGTACAAGGATAAACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000146513.8 ENSMUST00000203398.2 ENSMUST00000204128.3 |
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