Pregenerated sensors for GALNT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033316Ensembl transcript IDs: ENSMUST00000040001.14, ENSMUST00000165856.3, ENSMUST00000200404.5
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTCCAGACACCGACCCGTGTCTCGGCTCACGATGGGGCCGCTCTaGGTGAAGTCCCATAGCCTCTGCGTAGGCCTGGCTACATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TSRHRPVSRLTMGPL*VKSHSLCVGLATSS Trigger: TGAGGATGTAGCCAGGCCTACGCAGAGGCTATGGGACTTCACCCAGAGCGGCCCCATCGTGAGCCGAGACACGGGTCGGTGTCTGGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR GCA 90 bp | TCTCGGCTCACGATGGGGCCGCTCTGGGTGAAGTCCCATAGCCTCTaGGTAGGCCTGGCTACATCCTCACACTTCTTCAGGGTGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: SRLTMGPLWVKSHSL*VGLATSSHFFRVGM Trigger: CATGCCCACCCTGAAGAAGTGTGAGGATGTAGCCAGGCCTACGCAGAGGCTATGGGACTTCACCCAGAGCGGCCCCATCGTGAGCCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR TCA 90 bp | ATAGCCGGTTGGGGGAACACTGTAGAAAAGGCACGTGATTTGGCATaGGTGTGCGCCGTCCTCAGATGTCCTCCCTCGGGCAGAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: IAGWGNTVEKARDLA*VCAVLRCPPSGRAA Trigger: GGCAGCTCTGCCCGAGGGAGGACATCTGAGGACGGCGCACACTCATGCCAAATCACGTGCCTTTTCTACAGTGTTCCCCCAACCGGCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR GCA 90 bp | TCCAAGAGCCCCAATGTGTGGAGGTGGGCTGAGGGCAGAGGTCAGTaGCTGGCGTGTTTGATCCAGTTTCGGATCATCCACTTCTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: SKSPNVWRWAEGRGQ*LACLIQFRIIHFCP Trigger: GGGGCAGAAGTGGATGATCCGAAACTGGATCAAACACGCCAGGCACTGACCTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTaGAGGTGGGCTGAGGGCAGAGGTCAGTGCCTGGCGTGTTTGATC | + |
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Preference number: 1 (lower is better) Translates to: PSESQNIHESKSPNV*RWAEGRGQCLACLI Trigger: GATCAAACACGCCAGGCACTGACCTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR GCA 90 bp | GGTCAGTGCCTGGCGTGTTTGATCCAGTTTCGGATCATCCACTTCTaGCCCGAGCAGCGCTGTACTACTAACCGCAGCCCAAAGTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: GQCLACLIQFRIIHF*PEQRCTTNRSPKLA Trigger: TGCCAACTTTGGGCTGCGGTTAGTAGTACAGCGCTGCTCGGGGCAGAAGTGGATGATCCGAAACTGGATCAAACACGCCAGGCACTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR CAA 90 bp | TTCTTCAGGGTGGGCATGCGTCCCCGGCCGTCATCTACCAGACACTaGGAGTCGGGCAGAAAGGCGGTAGAGCCCAGGGGTCCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFRVGMRPRPSSTRH*ESGRKAVEPRGPSC Trigger: GCAGCTGGGACCCCTGGGCTCTACCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATGACGGCCGGGGACGCATGCCCACCCTGAAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | GACATCTCTACCTCCAGACACCGACCCGTGTCTCGGCTCACGATGGGGCCGCTCAAGAGCCCCAATGTGTaGAGGTGGGCTGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: DISTSRHRPVSRLTMGPLKSPNV*RWAEGR Trigger: TCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTT...GAGCGGCCCCATCGTGAGCCGAGACACGGGTCGGTGTCTGGAGGTAGAGATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCGGCCCACATTGCTCTTaGGTCTGTGGGGTGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CDPWSQNLALGCAGPTLLGPHCS*VCGVGK Trigger: CTTGCCCACCCCACAGACCCAAGAGCAATGTGGGCC...GAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCAGTGCCTGGCGTGTTTGATCCAGTTTCGGATCATCCACTTCTGCCCCCACACTTCTTCAGGGTaGGCATGCGTCCCCGGCCGT | + |
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Preference number: 2 (lower is better) Translates to: RGQCLACLIQFRIIHFCPHTSSG*ACVPGR Trigger: ACGGCCGGGGACGCATGCCCACCCTGAAGAAGTGTG...GGGGCAGAAGTGGATGATCCGAAACTGGATCAAACACGCCAGGCACTGACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | TCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCTTGGGTCTGTGGCACCCCAGGACCTTCTaGGTCCCAGAACATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: SQNLALGCAGPTLLLGLWHPRTF*VPEHSR Trigger: TCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTG...CCACAGACCCAAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | TGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCAAGAAGTTCCCATCTTaGCTCCACCCCAGGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: CDPWSQNLALGCAGPTLLKKFPS*LHPRTF Trigger: GAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTT...GAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR CAA 90 bp | CCTCAGATGTCCTCCCTCGGGCAGAGCTGCCTGTTCCACAAAAGTTaGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCG | + |
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Preference number: 2 (lower is better) Translates to: PQMSSLGQSCLFHKS*VPNAGWSGYSKVSA Trigger: CGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAACAGGCAGCTCTGCCCGAGGGAGGACATCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | TGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCACCTGCCCTCAGCACTaGATAGCTGAGTCTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: CDPWSQNLALGCAGPTLLTCPQH*IAESVC Trigger: ACAAACAGACTCAGCTATTCAGTGCTGAGGGCAGGT...GAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGGTCACAGAGGGCAGAGGTCAGTaGCTGGCGTGTTTGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLMQAGAAIPRSLRSLVTEGRGQ*LACLIQ Trigger: CTGGATCAAACACGCCAGGCACTGACCTCTGCCCTC...TGTGACCAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGTAAGAGCCCCAATGTGTaGAGGTGGGCTGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VPILAPPQDLLSPRTFTSKSPNV*RWAEGR Trigger: TCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTT...ACTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCTTGCTCTTGGGTCTGTaGGGTGGGCAAGAAGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPLKIALSYGEVEQASQGLLLGL*GGQEVP Trigger: GGGAACTTCTTGCCCACCCCACAGACCCAAGAGCAA...GCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR CAA 90 bp | CACTTCTGCCCCGAGCAGCGCTGTACTACTAACCGCAGCCCAAAGTaGGCATCTTTAGACATCTCTACCTCCAGACACCGACCCGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: HFCPEQRCTTNRSPK*ASLDISTSRHRPVS Trigger: AGACACGGGTCGGTGTCTGGAGGTAGAGATGTCTAAAGATGCCAACTTTGGGCTGCGGTTAGTAGTACAGCGCTGCTCGGGGCAGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | CAGATGTCCTCCCTCGGGCAGAGCTGCCTGTTCCACAAAAGTTTGGTTCCTAATCCTAGCCCTGGGGTGTaGAGGGCCCACATTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QMSSLGQSCLFHKSLVPNPSPGV*RAHIAL Trigger: AAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGG...ATTAGGAACCAAACTTTTGTGGAACAGGCAGCTCTGCCCGAGGGAGGACATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTCCCAGGGGTCCCAGCTaGAGGAGACCTTCGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: FHKSLVPNAGWSGYSKVSPRGPS*RRPSAL Trigger: CAGTGCCGAAGGTCTCCTGCAGCTGGGACCCCTGGG...AGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR CAA 90 bp | GTGATCTCTTCCCATTGCCTGTTACCAGAACACAAGCGGTCACCCTaGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VISSHCLLPEHKRSP*KIALSYGEVEQASQ Trigger: CTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGACCGCTTGTGTTCTGGTAACAGGCAATGGGAAGAGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | CAGATGTCCTCCCTCGGGCAGAGCTGCCTGTTCCACAAAAGTTTGGTTCCTAATCACCCCAGGACCTTCTaGGTCCCAGAACATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: QMSSLGQSCLFHKSLVPNHPRTF*VPEHSR Trigger: TCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTG...ATTAGGAACCAAACTTTTGTGGAACAGGCAGCTCTGCCCGAGGGAGGACATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGGGCTGGAGGGGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAAGCACGTGATTTGGCATaGGTGTGCGCCGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VRGWRGHLMMLAVEMTEQARDLA*VCAVLR Trigger: TCTGAGGACGGCGCACACTCATGCCAAATCACGTGC...TTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACCCCTCCAGCCCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTGGCATCTTTAGACATCTCTACCTCCAGACACCGACCCGTGTCTCGGCTCATCTACCAGACACTTaGAGTCGGGCAGAAAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: KVGIFRHLYLQTPTRVSAHLPDT*SRAERR Trigger: CCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATG...AGCCGAGACACGGGTCGGTGTCTGGAGGTAGAGATGTCTAAAGATGCCAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTGCACGTGATTTGGCATaGGTGTGCGCCGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CSTKVWFLMQAGAAIPRSARDLA*VCAVLR Trigger: TCTGAGGACGGCGCACACTCATGCCAAATCACGTGC...AGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTCGGATCATCCACTTCTaGCCCGAGCAGCGCTGTACT | + |
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Preference number: 2 (lower is better) Translates to: FHKSLVPNAGWSGYSKVSRIIHF*PEQRCT Trigger: AGTACAGCGCTGCTCGGGGCAGAAGTGGATGATCCG...AGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCACCTGCCCTCAGCACTaGATAGCTGAGTCTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: KSLVPNAGWSGYSKVSAITCPQH*IAESVC Trigger: ACAAACAGACTCAGCTATTCAGTGCTGAGGGCAGGT...GATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCCTGTTTGTTTCCATATaGGTTATGTACAGGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: PLKIALSYGEVEQASQGSLFVSI*VMYRDL Trigger: TAAGTCCCTGTACATAACCCATATGGAAACAAACAG...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGGGCTGGAGGGGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACTATTCCAAGGTCTCTaGGATCCCTGGTCACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: VRGWRGHLMMLAVEMTEQLFQGL*DPWSQN Trigger: GTTTTGTGACCAGGGATCGCAGAGACCTTGGAATAG...TTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACCCCTCCAGCCCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACCTGTTTGTTTCCATATaGGTTATGTACAGGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: WARSSHLGSTPGPSESQNLFVSI*VMYRDL Trigger: TAAGTCCCTGTACATAACCCATATGGAAACAAACAG...GTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCATTGCTCTTGGGTCTGTaGGGTGGGCAAGAAGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLMMLAVEMTEQQETRFPLLLGL*GGQEVP Trigger: GGGAACTTCTTGCCCACCCCACAGACCCAAGAGCAA...TGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGCTGTTTGTTTCCATATaGGTTATGTACAGGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: SSHLGSTPGPSESQNIHELFVSI*VMYRDL Trigger: TAAGTCCCTGTACATAACCCATATGGAAACAAACAG...CTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACATCAGCACTGAATAGCTaGGTCTGTTTGTTTCCATAT | + |
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Preference number: 2 (lower is better) Translates to: KCTESHPGDLFPLPVTRTSALNS*VCLFPY Trigger: ATATGGAAACAAACAGACTCAGCTATTCAGTGCTGA...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCTGCCTAGCTGACCCTTaGGAAGAAAAGTGCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GHLMMLAVEMTEQQETRFCLADP*EEKCTE Trigger: CTCTGTGCACTTTTCTTCCCAAGGGTCAGCTAGGCA...GAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR GCA 90 bp | GGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCGTGATCTCTTCCCATTaGCTGTTACCAGAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: GHLMMLAVEMTEQQETRFVISSH*LLPEHK Trigger: CTTGTGTTCTGGTAACAGGCAATGGGAAGAGATCAC...GAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR TCA 72 bp | AGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCTaGGCGGAGAGGCTCGGACCTGCTAGGACACGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SYGEVEQASQGS*AERLGPARTRC Trigger: GCACCGTGTCCTAGCAGGTCCGAGCCTCTCCGCTCAGCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACGGGCCCACATTGCTCTaGGGTCTGTGGGGTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: WARSSHLGSTPGPSESQNGPTLL*GLWGGQ Trigger: TTGCCCACCCCACAGACCCAAGAGCAATGTGGGCCC...GTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR GCA 72 bp | GCCTGGCTACATCCTCACACTTCTTCAGGGTGGGCATaGGTCCCCGGCCGTCATCTACCAGACACTTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: AWLHPHTSSGWA*VPGRHLPDTWS Trigger: ACTCCAAGTGTCTGGTAGATGACGGCCGGGGACGCATGCCCACCCTGAAGAAGTGTGAGGATGTAGCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR GCA 72 bp | ACGATGGGGCCGCTCTGGGTGAAGTCCCATAGCCTCTaGGTAGGCCTGGCTACATCCTCACACTTCTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TMGPLWVKSHSL*VGLATSSHFFR Trigger: CCTGAAGAAGTGTGAGGATGTAGCCAGGCCTACGCAGAGGCTATGGGACTTCACCCAGAGCGGCCCCATCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| 3UTR TCA 72 bp | TGGGGGAACACTGTAGAAAAGGCACGTGATTTGGCATaGGTGTGCGCCGTCCTCAGATGTCCTCCCTCGGGC | + |
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Preference number: 3 (lower is better) Translates to: WGNTVEKARDLA*VCAVLRCPPSG Trigger: GCCCGAGGGAGGACATCTGAGGACGGCGCACACTCATGCCAAATCACGTGCCTTTTCTACAGTGTTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR GCA 72 bp | GTGCGCCGTCCTCAGATGTCCTCCCTCGGGCAGAGCTaGCTGTTCCACAAAAGTTTGGTTCCTAATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: VRRPQMSSLGQS*LFHKSLVPNAG Trigger: GCCTGCATTAGGAACCAAACTTTTGTGGAACAGGCAGCTCTGCCCGAGGGAGGACATCTGAGGACGGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACAGGGCCCACATTGCTCTaGGGTCTGTGGGGTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: KCTESHPGDLFPLPVTRTGPTLL*GLWGGQ Trigger: TTGCCCACCCCACAGACCCAAGAGCAATGTGGGCCC...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CAA 90 bp | TGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCCTGTTCCACAAAAGTTaGGTTCCTAATGCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: CDPWSQNLALGCAGPTLLLFHKS*VPNAGW Trigger: CCAGCCTGCATTAGGAACCAAACTTTTGTGGAACAG...GAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACATGTGCAGGGCCCACATaGCTCTTGGGTCTGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KCTESHPGDLFPLPVTRTCAGPT*LLGLWG Trigger: ACCCCACAGACCCAAGAGCAATGTGGGCCCTGCACA...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGCAGTGCCTGGCGTGTTaGATCCAGTTTCGGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSHLGSTPGPSESQNIHEQCLAC*IQFRII Trigger: GATGATCCGAAACTGGATCAAACACGCCAGGCACTG...CTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| 3UTR TCA 72 bp | AAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTaGGTCCCAGAACATTCACGAGTCCAAGAGCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KKFPSWLHPRTF*VPEHSRVQEPQ Trigger: TTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR GCA 72 bp | CCCAGTGAGTGCCTAGCTGACCCTTGGGAAGAAAAGTaGACAGAGTCTCATCCCGGTGATCTCTTCCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: PSECLADPWEEK*TESHPGDLFPL Trigger: CAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTTTTCTTCCCAAGGGTCAGCTAGGCACTCACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR GCA 72 bp | AGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTaGCTGTTACCAGAACACAAGCGGTCACCCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAQSLIPVISSH*LLPEHKRSPLK Trigger: CTTCAAGGGTGACCGCTTGTGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACACAAGAAGTTCCCATCTaGGCTCCACCCCAGGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KCTESHPGDLFPLPVTRTQEVPI*APPQDL Trigger: AAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTG...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCACAAGAAGTTCCCATCTaGGCTCCACCCCAGGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLMMLAVEMTEQQETRFPQEVPI*APPQDL Trigger: AAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTG...TGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR GCA 72 bp | ACAAGTGAGGGGCTGGAGGGGTCATTTGATGATGCTTaGTGTAGAAATGACAGAGCAACAAGAGACTCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TSEGLEGSFDDA*CRNDRATRDSF Trigger: AAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACCCCTCCAGCCCCTCACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR CAA 72 bp | GTGGGCATGCGTCCCCGGCCGTCATCTACCAGACACTaGGAGTCGGGCAGAAAGGCGGTAGAGCCCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGMRPRPSSTRH*ESGRKAVEPRG Trigger: ACCCCTGGGCTCTACCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATGACGGCCGGGGACGCATGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTGTCCTCCTGGATCCGTaGGAGGGCGGGCTCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWGGQEVPILAPPQDLLSVLLDP*EGGLSP Trigger: TGGGCTGAGCCCGCCCTCGCACGGATCCAGGAGGAC...ACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACCCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAGGGTGGGCATGCGTCCCCGGCCGTCATCTACCAGACACTTGGAGTCGTTGGTACGCTCAATGTaGGCCACGCGGGAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFRVGMRPRPSSTRHLESLVRSM*ATREQG Trigger: CCCCTGCTCCCGCGTGGCCCACATTGAGCGTACCAA...CGACTCCAAGTGTCTGGTAGATGACGGCCGGGGACGCATGCCCACCCTGAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCACACTTCTTCAGGGTaGGCATGCGTCCCCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCDPWSQNLALGCAGPTLHTSSG*ACVPGR Trigger: ACGGCCGGGGACGCATGCCCACCCTGAAGAAGTGTG...CAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR TCA 90 bp | GTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGTCGATGGCTGGCAGGATaGTGCGCCGGCGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPILAPPQDLLSPRTFTSRWLAG*CAGGPP Trigger: AGGAGGACCGCCGGCGCATCATCCTGCCAGCCATCG...ACTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | CTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTTCCCGACGGCTGTTaGGCACAACCTTCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCDPWSQNLALGCAGPTLLPDGC*AQPSRG Trigger: GCCTCGTGAAGGTTGTGCGCAACAGCCGTCGGGAAG...CAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | TGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCGCGGCGCTGGCGTACTaGTGTACCTCAAACGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDPWSQNLALGCAGPTLLAALAY*CTSNVL Trigger: CAGCACGTTTGAGGTACAGCAGTACGCCAGCGCCGC...GAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | TGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACCCCAGGGGTCCCAGCTaGAGGAGACCTTCGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WARSSHLGSTPGPSESQNPRGPS*RRPSAL Trigger: CAGTGCCGAAGGTCTCCTGCAGCTGGGACCCCTGGG...GTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGACACACTTCTTCAGGGTaGGCATGCGTCCCCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGQEVPILAPPQDLLSPRHTSSG*ACVPGR Trigger: ACGGCCGGGGACGCATGCCCACCCTGAAGAAGTGTG...TCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTGGAGTACCTCCATGCTaGCACCACACTGCCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LWGGQEVPILAPPQDLLSGVPPC*HHTATP Trigger: GGGTGTGGCAGTGTGGTGGCAGCATGGAGGTACTCC...ACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACCCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGCCCAGGGGTCCCAGCTaGAGGAGACCTTCGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHLGSTPGPSESQNIHEPRGPS*RRPSAL Trigger: CAGTGCCGAAGGTCTCCTGCAGCTGGGACCCCTGGG...CTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGCCAGGCGCTGTAGGATaGCCTCACGGTCGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWFLMQAGAAIPRSLRSLPGAVG*PHGRPE Trigger: CTCTGGCCGACCGTGAGGCCATCCTACAGCGCCTGG...CAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | TCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCTTGGGTCTGTGGCAACGATGGGAGCCGTaGCCACCTTCCATCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQNLALGCAGPTLLLGLWQRWEP*PPSIPA Trigger: TGCAGGGATGGAAGGTGGCCACGGCTCCCATCGTTG...CCACAGACCCAAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | CGGTCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGTTGGTACGCTCAATGTaGGCCACGCGGGAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLKIALSYGEVEQASQLVRSM*ATREQG Trigger: CCCCTGCTCCCGCGTGGCCCACATTGAGCGTACCAA...CTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR CAA 72 bp | AACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCTaGGGTCTGTGGGGTGGGCAAGAAGTTCCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLALGCAGPTLL*GLWGGQEVPIL Trigger: CAAGATGGGAACTTCTTGCCCACCCCACAGACCCAAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | CTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCCGTCAGCAAAGTTTTaGTCTTCCTGGCCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCDPWSQNLALGCAGPTLPSAKF*SSWPPP Trigger: TGGCGGTGGCCAGGAAGATCAAAACTTTGCTGACGG...CAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAGGGAGGGTGTGTGGTTaGCCACACTGTGCACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGQEVPILAPPQDLLSPRGRVCG*PHCAQN Trigger: GTTCTGTGCACAGTGTGGTCAACCACACACCCTCCC...TCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCCGGATCATCCACTTCTaGCCCGAGCAGCGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLKIALSYGEVEQASQGSRIIHF*PEQRCT Trigger: AGTACAGCGCTGCTCGGGGCAGAAGTGGATGATCCG...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCTGTCATCTTGCAGAGTaGCAGCCACTCCTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLKIALSYGEVEQASQGSCHLAE*QPLLPG Trigger: GCCAGGGAGGAGTGGCTGCCACTCTGCAAGATGACA...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | TCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCGATGTTGTCGATGGCTaGCAGGATGATGCGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPLKIALSYGEVEQASQGDVVDG*QDDAPA Trigger: CGCCGGCGCATCATCCTGCCAGCCATCGACAACATC...GCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTCGGTCCAGCCAGTCCTaGGGAGGGATGATATACATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSLVTKPSPGVCRAHIRSSQS*GGMIYM Trigger: CATGTATATCATCCCTCCGCAGGACTGGCTGGACCG...AATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTTCAGGGTGGGCATGCGTCCCCGGCCGTCATCTACCAGACACTTGGACCACCTGTGAGGACATaGCATGACAGGGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLQGGHASPAVIYQTLGPPVRT*HDRGRG Trigger: TCCTCTACCCCTGTCATGGCATGTCCTCACAGGTGG...TCCAAGTGTCTGGTAGATGACGGCCGGGGACGCATGCCCACCCTGAAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | TCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCTCTTGGGTCTGTGGAGCTGGGAGGGTGTGTaGTTGACCACACTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQNLALGCAGPTLLLGLWSWEGV*LTTLCT Trigger: TGTGCACAGTGTGGTCAACCACACACCCTCCCAGCT...CCACAGACCCAAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | CCGGCCGTCATCTACCAGACACTTGGAGTCGGGCAGAAAGGCGGTAGAGCCCAGCATGCCATGTACACGTaGGACTTGAAGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAVIYQTLGVGQKGGRAQHAMYT*DLKSSI Trigger: GATGGACGACTTCAAGTCCCACGTGTACATGGCATG...CTGGGCTCTACCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATGACGGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLKIALSYGEVEQASQGSDRGRG*LGHRLL Trigger: CAGAAGACGATGACCGAGCCATCCTCTACCCCTGTC...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| 3UTR CAA 72 bp | CTCTTGGGTCTGTGGGGTGGGCAAGAAGTTCCCATCTaGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLWGGQEVPI*APPQDLLSPRT Trigger: TGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACCCCACAGACCCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | TTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGGTCACAGGGAGATGCGGTCACTaGGCTGCGCATTGTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLMQAGAAIPRSLRSLVTGRCGH*AAHCTQ Trigger: TTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCC...TGTGACCAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRSLVTKPSPGVCRAHISPLRT*GCCCRS Trigger: GGATCTACAACAACACCCTCACGTACGGAGAGGTGA...AATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PLKIALSYGEVEQASQGSSPLRT*GCCCRS Trigger: GGATCTACAACAACACCCTCACGTACGGAGAGGTGA...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CGGTCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGCCAGCTGTGAGGACATaGCATGACAGGGGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLKIALSYGEVEQASQPAVRT*HDRGRG Trigger: TCCTCTACCCCTGTCATGGCATGTCCTCACAGCTGG...CTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR GCA 90 bp | AGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGCTGAGGGCAGAGAAGTCCCATAGCCTCTaGGTAGGCCTGGCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTFTSPRAPMCGGGLRAEKSHSL*VGLATS Trigger: GGATGTAGCCAGGCCTACGCAGAGGCTATGGGACTT...CTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGCGATCCCTGGTCACAAAACCTAGCCCTGGGGTGTGCAGGGCCCACATTGCATGGGGATATTCCATaGCATGTACACGTGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LCDPWSQNLALGCAGPTLHGDIP*HVHVGL Trigger: AAGTCCCACGTGTACATGGCATGGAATATCCCCATG...CAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGACCAGGGATCGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGGTCACACCTCCACCAGCCCAATaGGCTTTGCAAGGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLMQAGAAIPRSLRSLVTPPPAQ*ALQGHS Trigger: TGAATGGCCTTGCAAAGCCCATTGGGCTGGTGGAGG...TGTGACCAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSESQNIHESKSPNVWRWDRGRG*LGHRLL Trigger: CAGAAGACGATGACCGAGCCATCCTCTACCCCTGTC...CCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCTTTAGACATCTCTACCTCCAGACACCGACCCGTGTCTCGGCTCACGGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LASLDISTSRHRPVSRLTDRGRG*LGHRLL Trigger: CAGAAGACGATGACCGAGCCATCCTCTACCCCTGTC...CGTGAGCCGAGACACGGGTCGGTGTCTGGAGGTAGAGATGTCTAAAGATGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGCATCTACCAGACACTTaGAGTCGGGCAGAAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSESQNIHESKSPNVWRWHLPDT*SRAERR Trigger: CCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATG...CCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACCAAACGTGCTGTACTTaGTGTTGTCGATGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WARSSHLGSTPGPSESQNQTCCT*CCRWLA Trigger: TGCCAGCCATCGACAACATCAAGTACAGCACGTTTG...GTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR TCA 90 bp | CTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGTCACCTCTCCGTACGTaGGGGTGTTGTTGTAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRTFTSPRAPMCGGGSPLRT*GCCCRS Trigger: GGATCTACAACAACACCCTCACGTACGGAGAGGTGA...CCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCAGCCATGGGGATATTCCATaGCATGTACACGTGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKIALSYGEVEQASQGSHGDIP*HVHVGL Trigger: AAGTCCCACGTGTACATGGCATGGAATATCCCCATG...GCTGCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | GTGAGGGGCTGGAGGGGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAATCTTCAGGGTGGGCATaGGTCCCCGGCCGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VRGWRGHLMMLAVEMTEQSSGWA*VPGRHL Trigger: TAGATGACGGCCGGGGACGCATGCCCACCCTGAAGA...TTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACCCCTCCAGCCCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTTTGGTACGCTCAATGTaGGCCACGCGGGAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSTKVWFLMQAGAAIPRSLVRSM*ATREQG Trigger: CCCCTGCTCCCGCGTGGCCCACATTGAGCGTACCAA...AGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | GTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGGTCACCATGCCATGTACACGTaGGACTTGAAGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VPNAGWSGYSKVSAIPGHHAMYT*DLKSSI Trigger: GATGGACGACTTCAAGTCCCACGTGTACATGGCATG...GTGACCAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGACTCCTGGGTTTGTCATaGGGATATTCCATGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GGQEVPILAPPQDLLSPRLLGLS*GYSMPC Trigger: ACATGGCATGGAATATCCCCATGACAAACCCAGGAG...TCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGGGGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCTCCTGGGTTTGTCATaGGGATATTCCATGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LWGGQEVPILAPPQDLLSLLGLS*GYSMPC Trigger: ACATGGCATGGAATATCCCCATGACAAACCCAGGAG...ACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACCCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | AAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCGATGTTGCCCACCTGTaGGGACATGCCATGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLVPNAGWSGYSKVSAIDVAHL*GHAMTG Trigger: CCCTGTCATGGCATGTCCTCACAGGTGGGCAACATC...GATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGAAGACCACGGAGATCTaGGGCAGGTCTTCAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PSESQNIHESKSPNVWRWKTTEI*GRSSEY Trigger: GTATTCTGAAGACCTGCCCCAGATCTCCGTGGTCTT...CCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | AGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGAACATTCACGAGCATGCCATGTACACGTaGGACTTGAAGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSHLGSTPGPSESQNIHEHAMYT*DLKSSI Trigger: GATGGACGACTTCAAGTCCCACGTGTACATGGCATG...CTCGTGAATGTTCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | TCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCCTCCTGGGTTTGTCATaGGGATATTCCATGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLKIALSYGEVEQASQGLLGLS*GYSMPC Trigger: ACATGGCATGGAATATCCCCATGACAAACCCAGGAG...GCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGTGGTTGACCACACTGTaGACAGAACGAAGGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRTFTSPRAPMCGGGWLTTL*TERRMT Trigger: AGTCATCCTTCGTTCTGTGCACAGTGTGGTCAACCA...CCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | TGTTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTACCACCTCCTCCAGATaGTCCAGGCGCTGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CSTKVWFLMQAGAAIPRSTTSSR*SRRCRM Trigger: CATCCTACAGCGCCTGGACCATCTGGAGGAGGTGGT...AGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | AGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGCTGAGGGCAGAGAACCTTCACGAGGCCTaGGTACCTTTTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: RTFTSPRAPMCGGGLRAENLHEA*VPFVNI Trigger: TATGTTCACAAAAGGTACCCAGGCCTCGTGAAGGTT...CTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | AAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCATCTACCAGACACTTaGAGTCGGGCAGAAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLVPNAGWSGYSKVSAIHLPDT*SRAERR Trigger: CCGCCTTTCTGCCCGACTCCAAGTGTCTGGTAGATG...GATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR GCA 90 bp | TGTTCCACAAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTAAGTCCCATAGCCTCTaGGTAGGCCTGGCTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: CSTKVWFLMQAGAAIPRSKSHSL*VGLATS Trigger: GGATGTAGCCAGGCCTACGCAGAGGCTATGGGACTT...AGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTTGTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | AGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGCTGAGGGCAGAGTGTTATATGGCTTTTTaGTACGCTCAATGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTFTSPRAPMCGGGLRAECYMAF*YAQCGP Trigger: TGGCCCACATTGAGCGTACCAAAAAGCCATATAACA...CTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CAGATGTCCTCCCTCGGGCAGAGCTGCCTGTTCCACAAAAGTTTGGTTCCTAATCATGGGGATATTCCATaGCATGTACACGTGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QMSSLGQSCLFHKSLVPNHGDIP*HVHVGL Trigger: AAGTCCCACGTGTACATGGCATGGAATATCCCCATG...ATTAGGAACCAAACTTTTGTGGAACAGGCAGCTCTGCCCGAGGGAGGACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR GCA 90 bp | CATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCATCTTCAGGGTGGGCATaGGTCCCCGGCCGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLMMLAVEMTEQQETRFPSSGWA*VPGRHL Trigger: TAGATGACGGCCGGGGACGCATGCCCACCCTGAAGA...TGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGTGTTATATGGCTTTTTaGTACGCTCAATGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSPRTFTSPRAPMCGGGCYMAF*YAQCGP Trigger: TGGCCCACATTGAGCGTACCAAAAAGCCATATAACA...CCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGTGTTATATGGCTTTTTaGTACGCTCAATGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSESQNIHESKSPNVWRWCYMAF*YAQCGP Trigger: TGGCCCACATTGAGCGTACCAAAAAGCCATATAACA...CCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACACCTGGGTACCTTTTGTaGACATACTGGTCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KCTESHPGDLFPLPVTRTPGYLL*TYWSRL Trigger: CAATCTGGACCAGTATGTTCACAAAAGGTACCCAGG...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR TCA 90 bp | TTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCAGGAGTCCTGCGGAGGGATaGTATACATGCACCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FDDACCRNDRATRDSFPRSPAEG*YTCTTG Trigger: GCCTGTGGTGCATGTATATCATCCCTCCGCAGGACT...CCTGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR GCA 90 bp | CATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCACGGATCATCCACTTCTaGCCCGAGCAGCGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HLMMLAVEMTEQQETRFPRIIHF*PEQRCT Trigger: AGTACAGCGCTGCTCGGGGCAGAAGTGGATGATCCG...TGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CCA 90 bp | TCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGGGCGATGTCGTTGTTATATaGCTTTTTGGTACGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLKIALSYGEVEQASQGDVVVI*LFGTLN Trigger: ATTGAGCGTACCAAAAAGCCATATAACAACGACATC...GCCCTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR TCA 90 bp | TTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCAGGACACCGAGAAGAGAATaGTGCCCACGAACACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FDDACCRNDRATRDSFPRTPRRE*CPRTPG Trigger: TCCTGGTGTTCGTGGGCATCATTCTCTTCTCGGTGT...CCTGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR TCA 90 bp | TTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCAGGTATCATCCACCAGGATaGCTTCCTTCAGGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FDDACCRNDRATRDSFPRYHPPG*LPSGAG Trigger: CCCAGCTCCTGAAGGAAGTCATCCTGGTGGATGATA...CCTGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGAGTCCCAGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGATGTCGTTGTTATATaGCTTTTTGGTACGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSESQNIHESKSPNVWRWDVVVI*LFGTLN Trigger: ATTGAGCGTACCAAAAAGCCATATAACAACGACATC...CCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCTGGGACTCAGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CCA 90 bp | AACCGCAGCCCAAAGTTGGCATCTTTAGACATCTCTACCTCCAGACACCGACCCGATGTCGTTGTTATATaGCTTTTTGGTACGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NRSPKLASLDISTSRHRPDVVVI*LFGTLN Trigger: ATTGAGCGTACCAAAAAGCCATATAACAACGACATC...GGGTCGGTGTCTGGAGGTAGAGATGTCTAAAGATGCCAACTTTGGGCTGCGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS GCA 90 bp | GGATGGCCTCACGGTCGGCCAGAGCACTCGCCTTGGATAGCCGATTaGGCATCCGGCGGTCGGTGCCTCGCACGACCTGCACCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GWPHGRPEHSPWIAD*ASGGRCLARPAPAP Trigger: AGGCGCTGGTGCAGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS CCA 90 bp | CCAGGCGCTGTAGGATGGCCTCACGGTCGGCCAGAGCACTCGCCTTaGATAGCCGATTGCGCATCCGGCGGTCGGTGCCTCGCACGACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGAVGWPHGRPEHSP*IADCASGGRCLARP Trigger: AGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTACAGCGCCTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS GCA 90 bp | TTGGATAGCCGATTGCGCATCCGGCGGTCGGTGCCTCGCACGACCTaGACCAGCGCCTCAGAACGGTCCTGCAGGCGGCAGTACACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSRLRIRRSVPRTT*TSASERSCRRQYTE Trigger: CTCGGTGTACTGCCGCCTGCAGGACCGTTCTGAGGCGCTGGTGCAGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS GCA 90 bp | CGGTCGGTGCCTCGCACGACCTGCACCAGCGCCTCAGAACGGTCCTaGAGGCGGCAGTACACCGAGAAGAGAATGATGCCCACGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: RSVPRTTCTSASERS*RRQYTEKRMMPTNT Trigger: GGTGTTCGTGGGCATCATTCTCTTCTCGGTGTACTGCCGCCTGCAGGACCGTTCTGAGGCGCTGGTGCAGGTCGTGCGAGGCACCGACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS TCA 90 bp | ACTCCCGGTCCACCACAAATGAGCAGCCAATCATGGCAGGTGTCCTaGTGGGCGCTGACTCGTCACCTCGGTCCAGCCAGTCCTGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TPGPPQMSSQSWQVS*WALTRHLGPASPAE Trigger: CTCCGCAGGACTGGCTGGACCGAGGTGACGAGTCAGCGCCCATCAGGACACCTGCCATGATTGGCTGCTCATTTGTGGTGGACCGGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS CCA 90 bp | GCTGGTTGTAGACCACCTCCTCCAGATGGTCCAGGCGCTGTAGGATaGCCTCACGGTCGGCCAGAGCACTCGCCTTGGATAGCCGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGCRPPPPDGPGAVG*PHGRPEHSPWIADC Trigger: GCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTACAGCGCCTGGACCATCTGGAGGAGGTGGTCTACAACCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS CCA 90 bp | TGTAGCGCACCAGCTGTGAGGACATGCCATGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTGCCCCCTGGTCCAAGCAGTAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSAPAVRTCHDRGRG*LGHRLLPPGPSSSR Trigger: GCGGCTACTGCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCCTCACAGCTGGTGCGCTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS CCA 90 bp | AGCTGCGCATTGTACCCAAAGTCCTCGAACTTGCCCTCGGTCTCTTaGCTGTCATCTTGCAGAGTGGCAGCCACTCCTCCCTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCALYPKSSNLPSVS*LSSCRVAATPPWPR Trigger: CCTGGGCCAGGGAGGAGTGGCTGCCACTCTGCAAGATGACAGCCAAGAGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS CCA 90 bp | AGATGTTGCCCACCTGTGAGGACATGCCATGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTGCCCCCTGGTCCAAGCAGTAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCCPPVRTCHDRGRG*LGHRLLPPGPSSSR Trigger: GCGGCTACTGCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCCTCACAGGTGGGCAACATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
||
| CDS TCA 90 bp | TGGGCCTGTAGTCAGGGATGGTCCTATCCAGGGAGATGCGGTCACTaGGCTGCGCATTGTACCCAAAGTCCTCGAACTTGCCCTCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WACSQGWSYPGRCGH*AAHCTQSPRTCPRS Trigger: AGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCCTGGATAGGACCATCCCTGACTACAGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS GCA 90 bp | GGACATGCCATGACAGGGGTAGAGGATGGCTCGGTCATCGTCTTCTaGCCCCTGGTCCAAGCAGTAGCCGCTAGCTTTGCTGTTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHAMTGVEDGSVIVF*PLVQAVAASFAVSH Trigger: GTGAGAAACAGCAAAGCTAGCGGCTACTGCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGACAGTGCCTGGCGTGTTaGATCCAGTTTCGGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GGQEVPILAPPQDLLSPRQCLAC*IQFRII Trigger: GATGATCCGAAACTGGATCAAACACGCCAGGCACTG...TCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAAGAAGTTCCCATCTTGGCTCCACCCCAGGACCTTCTGAGTCCCAGATGGTCCAGATTGAACTaGAGTTCCACGTTGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGQEVPILAPPQDLLSPRWSRLN*SSTLSL Trigger: CAGCGACAACGTGGAACTCAAGTTCAATCTGGACCA...TCTGGGACTCAGAAGGTCCTGGGGTGGAGCCAAGATGGGAACTTCTTGCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS-3UTR CAA 90 bp | AGAACATTCACGAGTCCAAGAGCCCCAATGTGTGGAGGTGGGCTGAGGGCAGAGGTGCTGTACTTGATGTaGTCGATGGCTGGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTFTSPRAPMCGGGLRAEVLYLM*SMAGRM Trigger: CATCCTGCCAGCCATCGACAACATCAAGTACAGCAC...CTCTGCCCTCAGCCCACCTCCACACATTGGGGCTCTTGGACTCGTGAATGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
||
| CDS GCA 90 bp | AGACCACGGAGATCTGGGGCAGGTCTTCAGAATACGTTATCTGTCTaGACCTCTTGGGCCTGTAGTCAGGGATGGTCCTATCCAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPRRSGAGLQNTLSV*TSWACSQGWSYPGR Trigger: TCTCCCTGGATAGGACCATCCCTGACTACAGGCCCAAGAGGTGCAGACAGATAACGTATTCTGAAGACCTGCCCCAGATCTCCGTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 90 bp | AGATCTGGGGCAGGTCTTCAGAATACGTTATCTGTCTGCACCTCTTaGGCCTGTAGTCAGGGATGGTCCTATCCAGGGAGATGCGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: RSGAGLQNTLSVCTS*ACSQGWSYPGRCGH Trigger: GTGACCGCATCTCCCTGGATAGGACCATCCCTGACTACAGGCCCAAGAGGTGCAGACAGATAACGTATTCTGAAGACCTGCCCCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | CGGTCACCCTTGAAGATCGCCTTAAGTTACGGTGAGGTTGAGCAGGCGAGCCAGTCAAACGTGCTGTACTaGATGTTGTCGATGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RSPLKIALSYGEVEQASQSNVLY*MLSMAG Trigger: GCCAGCCATCGACAACATCAAGTACAGCACGTTTGA...CTGGCTCGCCTGCTCAACCTCACCGTAACTTAAGGCGATCTTCAAGGGTGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | TTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCTGGTCACACAGTGCCTGGCGTGTTaGATCCAGTTTCGGATCATC | + |
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Preference number: 5 (lower is better) Translates to: FLMQAGAAIPRSLRSLVTQCLAC*IQFRII Trigger: GATGATCCGAAACTGGATCAAACACGCCAGGCACTG...TGTGACCAGGGATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
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| CDS TCA 90 bp | GGAGGGTGTGTGGTTGACCACACTGTGCACAGAACGAAGGATGACTaGAAGTGCCTCGTTGACAAAGATGAAGACCACGGAGATCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GGCVVDHTVHRTKDD*KCLVDKDEDHGDLG Trigger: CCCCAGATCTCCGTGGTCTTCATCTTTGTCAACGAGGCACTTTCAGTCATCCTTCGTTCTGTGCACAGTGTGGTCAACCACACACCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS TCA 90 bp | CGACGGCTGTTGCGCACAACCTTCACGAGGCCTGGGTACCTTTTGTaGACATACTGGTCCAGATTGAACTTGAGTTCCACGTTGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RRLLRTTFTRPGYLL*TYWSRLNLSSTLSL Trigger: CAGCGACAACGTGGAACTCAAGTTCAATCTGGACCAGTATGTTCACAAAAGGTACCCAGGCCTCGTGAAGGTTGTGCGCAACAGCCGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | AAAAGTTTGGTTCCTAATGCAGGCTGGAGCGGCTATTCCAAGGTCTCTGCGATCCCAGCCCAATGGGCTTaGCAAGGCCATTCAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: KSLVPNAGWSGYSKVSAIPAQWA*QGHSAG Trigger: ACCAGCTGAATGGCCTTGCAAAGCCCATTGGGCTGG...GATCGCAGAGACCTTGGAATAGCCGCTCCAGCCTGCATTAGGAACCAAACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 90 bp | GATCAGACCTTCCCGACGGCTGTTGCGCACAACCTTCACGAGGCCTaGGTACCTTTTGTGAACATACTGGTCCAGATTGAACTTGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: DQTFPTAVAHNLHEA*VPFVNILVQIELEF Trigger: GAACTCAAGTTCAATCTGGACCAGTATGTTCACAAAAGGTACCCAGGCCTCGTGAAGGTTGTGCGCAACAGCCGTCGGGAAGGTCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 90 bp | ATGACTTCCTTCAGGAGCTGGGAGGGTGTGTGGTTGACCACACTGTaGACAGAACGAAGGATGACTGAAAGTGCCTCGTTGACAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: MTSFRSWEGVWLTTL*TERRMTESASLTKM Trigger: CATCTTTGTCAACGAGGCACTTTCAGTCATCCTTCGTTCTGTGCACAGTGTGGTCAACCACACACCCTCCCAGCTCCTGAAGGAAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | AAGTGCACAGAGTCTCATCCCGGTGATCTCTTCCCATTGCCTGTTACCAGAACAACGAACACCAGGATGTaGACCGTCAGCAAAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCTESHPGDLFPLPVTRTTNTRM*TVSKVL Trigger: CAAAACTTTGCTGACGGTCAACATCCTGGTGTTCGT...TGTTCTGGTAACAGGCAATGGGAAGAGATCACCGGGATGAGACTCTGTGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | GGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCACCGTCAGCAAAGTTTaGATCTTCCTGGCCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: GHLMMLAVEMTEQQETRFTVSKV*IFLATA Trigger: GGCGGTGGCCAGGAAGATCAAAACTTTGCTGACGGT...GAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | GGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCTGGGAGGGTGTGTGGTaGACCACACTGTGCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: GHLMMLAVEMTEQQETRFWEGVW*TTLCTE Trigger: TTCTGTGCACAGTGTGGTCAACCACACACCCTCCCA...GAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | TTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCCCAGGACTGAAAGTGCCTCGTaGACAAAGATGAAGACCACG | + |
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Preference number: 5 (lower is better) Translates to: FDDACCRNDRATRDSFPRTESAS*TKMKTT Trigger: CGTGGTCTTCATCTTTGTCAACGAGGCACTTTCAGT...CCTGGGAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS-3UTR CAA 90 bp | GGTCATTTGATGATGCTTGCTGTAGAAATGACAGAGCAACAAGAGACTCGTTTCACATACTGGTCCAGATaGAACTTGAGTTCCACGTTG | + |
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Preference number: 5 (lower is better) Translates to: GHLMMLAVEMTEQQETRFTYWSR*NLSSTL Trigger: CAACGTGGAACTCAAGTTCAATCTGGACCAGTATGT...GAAACGAGTCTCTTGTTGCTCTGTCATTTCTACAGCAAGCATCATCAAATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | CGATTGCGCATCCGGCGGTCGGTGCCTCGCACGACCTaGACCAGCGCCTCAGAACGGTCCTGCAGGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RLRIRRSVPRTT*TSASERSCRRQ Trigger: CTGCCGCCTGCAGGACCGTTCTGAGGCGCTGGTGCAGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 72 bp | TCGATGGCTGGCAGGATGATGCGCCGGCGGTCCTCCTaGATCCGTGCGAGGGCGGGCTCAGCCCAGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SMAGRMMRRRSS*IRARAGSAQPV Trigger: CACTGGCTGGGCTGAGCCCGCCCTCGCACGGATCCAGGAGGACCGCCGGCGCATCATCCTGCCAGCCATCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | AGGATGGCCTCACGGTCGGCCAGAGCACTCGCCTTGGATAGCCGATaGCGCATCCGGCGGTCGGTGCCTCGCACGACCTGCACCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RMASRSARALALDSR*RIRRSVPRTTCTSA Trigger: GGCGCTGGTGCAGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | TCCAGGCGCTGTAGGATGGCCTCACGGTCGGCCAGAGCACTCGCCTaGGATAGCCGATTGCGCATCCGGCGGTCGGTGCCTCGCACGACC | + |
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Preference number: 6 (lower is better) Translates to: SRRCRMASRSARALA*DSRLRIRRSVPRTT Trigger: GGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTACAGCGCCTGGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | TCGCCTTGGATAGCCGATTGCGCATCCGGCGGTCGGTaGCTCGCACGACCTGCACCAGCGCCTCAGAACGGT | + |
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Preference number: 6 (lower is better) Translates to: SPWIADCASGGR*LARPAPAPQNG Trigger: ACCGTTCTGAGGCGCTGGTGCAGGTCGTGCGAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 72 bp | GTAGGATGGCCTCACGGTCGGCCAGAGCACTCGCCTTaGATAGCCGATTGCGCATCCGGCGGTCGGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VGWPHGRPEHSP*IADCASGGRCL Trigger: GAGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 72 bp | TGTAGGATGGCCTCACGGTCGGCCAGAGCACTCGCCTaGGATAGCCGATTGCGCATCCGGCGGTCGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CRMASRSARALA*DSRLRIRRSVP Trigger: AGGCACCGACCGCCGGATGCGCAATCGGCTATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTACA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | CCTCGCACGACCTGCACCAGCGCCTCAGAACGGTCCTaGAGGCGGCAGTACACCGAGAAGAGAATGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PRTTCTSASERS*RRQYTEKRMMP Trigger: GGGCATCATTCTCTTCTCGGTGTACTGCCGCCTGCAGGACCGTTCTGAGGCGCTGGTGCAGGTCGTGCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | GTACCCAAAGTCCTCGAACTTGCCCTCGGTCTCTTGGCTGTCATCTaGCAGAGTGGCAGCCACTCCTCCCTGGCCCAGGCCACCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VPKVLELALGLLAVI*QSGSHSSLAQATWP Trigger: GGGCCAGGTGGCCTGGGCCAGGGAGGAGTGGCTGCCACTCTGCAAGATGACAGCCAAGAGACCGAGGGCAAGTTCGAGGACTTTGGGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | CCGTGGGCGGCGCTGGCGTACTGCTGTACCTCAAACGTGCTGTACTaGATGTTGTCGATGGCTGGCAGGATGATGCGCCGGCGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PWAALAYCCTSNVLY*MLSMAGRMMRRRSS Trigger: GGAGGACCGCCGGCGCATCATCCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTACAGCAGTACGCCAGCGCCGCCCACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 72 bp | AGACCACCTCCTCCAGATGGTCCAGGCGCTGTAGGATaGCCTCACGGTCGGCCAGAGCACTCGCCTTGGATA | + |
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Preference number: 6 (lower is better) Translates to: RPPPPDGPGAVG*PHGRPEHSPWI Trigger: TATCCAAGGCGAGTGCTCTGGCCGACCGTGAGGCCATCCTACAGCGCCTGGACCATCTGGAGGAGGTGGTCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | GCGGCGCTGGCGTACTGCTGTACCTCAAACGTGCTGTACTTGATGTaGTCGATGGCTGGCAGGATGATGCGCCGGCGGTCCTCCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: AALAYCCTSNVLYLM*SMAGRMMRRRSSWI Trigger: GATCCAGGAGGACCGCCGGCGCATCATCCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTACAGCAGTACGCCAGCGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 72 bp | CCAGCTGTGAGGACATGCCATGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTGCCCCCTGGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PAVRTCHDRGRG*LGHRLLPPGPS Trigger: GCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCCTCACAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
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| CDS CCA 72 bp | CCACCTGTGAGGACATGCCATGACAGGGGTAGAGGATaGCTCGGTCATCGTCTTCTGCCCCCTGGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PPVRTCHDRGRG*LGHRLLPPGPS Trigger: GCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCCTCACAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200404.5 |
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| CDS CAA 90 bp | GAGCTGCGCATTGTACCCAAAGTCCTCGAACTTGCCCTCGGTCTCTaGGCTGTCATCTTGCAGAGTGGCAGCCACTCCTCCCTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ELRIVPKVLELALGL*AVILQSGSHSSLAQ Trigger: CTGGGCCAGGGAGGAGTGGCTGCCACTCTGCAAGATGACAGCCAAGAGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | GACCTTCGGCACTGTAGCGCACCAGCTGTGAGGACATaGCATGACAGGGGTAGAGGATGGCTCGGTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: DLRHCSAPAVRT*HDRGRGWLGHR Trigger: ACGATGACCGAGCCATCCTCTACCCCTGTCATGGCATGTCCTCACAGCTGGTGCGCTACAGTGCCGAAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 |
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| CDS GCA 72 bp | GGGATGGTCCTATCCAGGGAGATGCGGTCACTGAGCTaGGCATTGTACCCAAAGTCCTCGAACTTGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GMVLSREMRSLS*ALYPKSSNLPS Trigger: CGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCCTGGATAGGACCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | ATGACAGGGGTAGAGGATGGCTCGGTCATCGTCTTCTaGCCCCTGGTCCAAGCAGTAGCCGCTAGCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: MTGVEDGSVIVF*PLVQAVAASFA Trigger: AGCAAAGCTAGCGGCTACTGCTTGGACCAGGGGGCAGAAGACGATGACCGAGCCATCCTCTACCCCTGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| CDS CAA 72 bp | GCGTACTGCTGTACCTCAAACGTGCTGTACTTGATGTaGTCGATGGCTGGCAGGATGATGCGCCGGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AYCCTSNVLYLM*SMAGRMMRRRS Trigger: GGACCGCCGGCGCATCATCCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTACAGCAGTACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 72 bp | GCGCTGGCGTACTGCTGTACCTCAAACGTGCTGTACTaGATGTTGTCGATGGCTGGCAGGATGATGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: ALAYCCTSNVLY*MLSMAGRMMRR Trigger: CCGGCGCATCATCCTGCCAGCCATCGACAACATCAAGTACAGCACGTTTGAGGTACAGCAGTACGCCAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | GAGATGCGGTCACTGAGCTGCGCATTGTACCCAAAGTCCTCGAACTaGCCCTCGGTCTCTTGGCTGTCATCTTGCAGAGTGGCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: EMRSLSCALYPKSSN*PSVSWLSSCRVAAT Trigger: AGTGGCTGCCACTCTGCAAGATGACAGCCAAGAGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 90 bp | TCAGGGATGGTCCTATCCAGGGAGATGCGGTCACTGAGCTGCGCATaGTACCCAAAGTCCTCGAACTTGCCCTCGGTCTCTTGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SGMVLSREMRSLSCA*YPKSSNLPSVSWLS Trigger: TGACAGCCAAGAGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCCTGGATAGGACCATCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 72 bp | GTCCTATCCAGGGAGATGCGGTCACTGAGCTGCGCATaGTACCCAAAGTCCTCGAACTTGCCCTCGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLSREMRSLSCA*YPKSSNLPSVS Trigger: AGAGACCGAGGGCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCCTGGATAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS TCA 72 bp | AGTCAGGGATGGTCCTATCCAGGGAGATGCGGTCACTaGGCTGCGCATTGTACCCAAAGTCCTCGAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQGWSYPGRCGH*AAHCTQSPRTC Trigger: GCAAGTTCGAGGACTTTGGGTACAATGCGCAGCTCAGTGACCGCATCTCCCTGGATAGGACCATCCCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS GCA 72 bp | TTCAGGAGCTGGGAGGGTGTGTGGTTGACCACACTGTaGACAGAACGAAGGATGACTGAAAGTGCCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FRSWEGVWLTTL*TERRMTESASL Trigger: CAACGAGGCACTTTCAGTCATCCTTCGTTCTGTGCACAGTGTGGTCAACCACACACCCTCCCAGCTCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CCA 72 bp | TTCCCGACGGCTGTTGCGCACAACCTTCACGAGGCCTaGGTACCTTTTGTGAACATACTGGTCCAGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: FPTAVAHNLHEA*VPFVNILVQIE Trigger: TTCAATCTGGACCAGTATGTTCACAAAAGGTACCCAGGCCTCGTGAAGGTTGTGCGCAACAGCCGTCGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS CAA 72 bp | GCCTCTCGGATACATCCCCAAAGTCTACTCCTGGGTTaGTCATGGGGATATTCCATGCCATGTACACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASRIHPQSLLLG*SWGYSMPCTRG Trigger: CCCACGTGTACATGGCATGGAATATCCCCATGACAAACCCAGGAGTAGACTTTGGGGATGTATCCGAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040001.14 ENSMUST00000165856.3 ENSMUST00000200404.5 |
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| CDS CAA 72 bp | ACCGAGAAGAGAATGATGCCCACGAACACCAGGATGTaGACCGTCAGCAAAGTTTTGATCTTCCTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: TEKRMMPTNTRM*TVSKVLIFLAT Trigger: GGTGGCCAGGAAGATCAAAACTTTGCTGACGGTCAACATCCTGGTGTTCGTGGGCATCATTCTCTTCTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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| CDS TCA 72 bp | GTGGTTGACCACACTGTGCACAGAACGAAGGATGACTaGAAGTGCCTCGTTGACAAAGATGAAGACCACGGA | + |
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Preference number: 6 (lower is better) Translates to: VVDHTVHRTKDD*KCLVDKDEDHG Trigger: TCCGTGGTCTTCATCTTTGTCAACGAGGCACTTTCAGTCATCCTTCGTTCTGTGCACAGTGTGGTCAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040001.14 |
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