Pregenerated sensors for GALNT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090035Ensembl transcript IDs: ENSMUST00000161240.4
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACTCTGAGGGGAGTTaGACACTCTCTGCAGAACTGGGCTGGCCCACTTCAGTTTCACAC | + |
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Preference number: 1 (lower is better) Translates to: RKPLHFQVSAHSEGS*TLSAELGWPTSVSH Trigger: GTGTGAAACTGAAGTGGGCCAGCCCAGTTCTGCAGAGAGTGTTCAACTCCCCTCAGAGTGGGCGCTGACCTGGAAATGGAGAGGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | TGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACTCTaGGGGGAGTTGAACACTCTCTGCAGAACTGGGCTGGCCCACTTC | + |
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Preference number: 1 (lower is better) Translates to: CNKEEASPFPGQRPL*GELNTLCRTGLAHF Trigger: GAAGTGGGCCAGCCCAGTTCTGCAGAGAGTGTTCAACTCCCCTCAGAGTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | AGCAGCGGTGCTCTGTGTACCCAGCTTCAGAGTGATATCCCCAGATaGACCACGGCTTTCCAGTGTTCTTACAGACAGCTGCCAGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: SSGALCTQLQSDIPR*TTAFQCSYRQLPGD Trigger: GTCACCTGGCAGCTGTCTGTAAGAACACTGGAAAGCCGTGGTTCATCTGGGGATATCACTCTGAAGCTGGGTACACAGAGCACCGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | CGGCTGCCTTGTGCTTTCCAGGAGCTCCAAGGCACCAATCAACAATaGCCAAGACAGCCTTTCCCCCACTGCAATAAAGAGGAAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RLPCAFQELQGTNQQ*PRQPFPHCNKEEAS Trigger: AGAGGCTTCCTCTTTATTGCAGTGGGGGAAAGGCTGTCTTGGTCATTGTTGATTGGTGCCTTGGAGCTCCTGGAAAGCACAAGGCAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR GCA 90 bp | ACCAGCTACTCAGCACCACCCACGTTAAAAGGAAAGACACAGAAGTaGTTCTCTCCAAGTTGCATAGAGGTGAGGGCCCCAGAGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TSYSAPPTLKGKTQK*FSPSCIEVRAPEGG Trigger: ACCTCCCTCTGGGGCCCTCACCTCTATGCAACTTGGAGAGAAGCACTTCTGTGTCTTTCCTTTTAACGTGGGTGGTGCTGAGTAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | AGTTCACAGAGAATGCAGCTTACAGAGCGGGGTGATGTGAGGTGTTaGGATATGGGCCAGTTCACTCCAACGGCTCCCGGTTACAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SSQRMQLTERGDVRC*DMGQFTPTAPGYRE Trigger: TTCTCTGTAACCGGGAGCCGTTGGAGTGAACTGGCCCATATCTCAACACCTCACATCACCCCGCTCTGTAAGCTGCATTCTCTGTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | CACAAACAAGTTCACAGAGAATGCAGCTTACAGAGCGGGGTGATGTaGGGTGTTGAGATATGGGCCAGTTCACTCCAACGGCTCCCGGTT | + |
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Preference number: 1 (lower is better) Translates to: HKQVHRECSLQSGVM*GVEIWASSLQRLPV Trigger: AACCGGGAGCCGTTGGAGTGAACTGGCCCATATCTCAACACCTCACATCACCCCGCTCTGTAAGCTGCATTCTCTGTGAACTTGTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | TTACTCACAAACAAGTTCACAGAGAATGCAGCTTACAGAGCGGGGTaGTGTGAGGTGTTGAGATATGGGCCAGTTCACTCCAACGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LLTNKFTENAAYRAG*CEVLRYGPVHSNGS Trigger: GGAGCCGTTGGAGTGAACTGGCCCATATCTCAACACCTCACATCACCCCGCTCTGTAAGCTGCATTCTCTGTGAACTTGTTTGTGAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 90 bp | ACTGGGCTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTaGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGACTTCAAACCA | + |
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Preference number: 1 (lower is better) Translates to: TGLAHFSFTHFGKGI*GWLWGSLTCVDFKP Trigger: TGGTTTGAAGTCAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAGCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 90 bp | CACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTaGGGAAGTCTCACTTGTGTTGACTTCAAACCATTAGACATTAAG | + |
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Preference number: 1 (lower is better) Translates to: HFSFTHFGKGIWGWL*GSLTCVDFKPLDIK Trigger: CTTAATGTCTAATGGTTTGAAGTCAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 90 bp | AATAAGACCTCCAAACTTGCATTCAAGACCAGGACCCTCTTCCAATaGAACATATATCAACCCCAGGCCTTTTCCTCAAGATCAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: NKTSKLAFKTRTLFQ*NIYQPQAFSSRSNF Trigger: GAAATTTGATCTTGAGGAAAAGGCCTGGGGTTGATATATGTTTCATTGGAAGAGGGTCCTGGTCTTGAATGCAAGTTTGGAGGTCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 90 bp | TTCAATCTGCTAACATCAATGCACATGCAAGAGCCTACTATTTACTaGCTGAATAAACACACTTTCCCTTACAAACAAGGTGTTTACGGT | + |
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Preference number: 1 (lower is better) Translates to: FNLLTSMHMQEPTIY*LNKHTFPYKQGVYG Trigger: ACCGTAAACACCTTGTTTGTAAGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGATGTTAGCAGATTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 90 bp | TTCCTAACATTTAAACATGTAAATTCTACAGCAAAATGGAGAACTTaGGTGGTTGGCCAAAAACTGGAAATAAGTGAAAGCGTCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: FLTFKHVNSTAKWRT*VVGQKLEISESVSC Trigger: GCAAGAGACGCTTTCACTTATTTCCAGTTTTTGGCCAACCACCCAAGTTCTCCATTTTGCTGTAGAATTTACATGTTTAAATGTTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGGGAGGCCCAGCCTTCTaGATGAGCTTCATTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLTQGKSCPGARLPCAFQGGPAF*MSFILG Trigger: TCCTAGAATGAAGCTCATTCAGAAGGCTGGGCCTCC...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGCAGACAGCTGCCAGGTaGCTTCTGGTAAAATACAGT | + |
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Preference number: 2 (lower is better) Translates to: LLTQGKSCPGARLPCAFQQTAAR*LLVKYS Trigger: ACTGTATTTTACCAGAAGTCACCTGGCAGCTGTCTG...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGGGTGCAATCAGAAAATaGCCCATTACTCACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LLTQGKSCPGARLPCAFQGAIRK*PITHKQ Trigger: TTGTTTGTGAGTAATGGGGCATTTTCTGATTGCACC...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CAA 90 bp | ACCACCCACGTTAAAAGGAAAGACACAGAAGTGCTTCTCTCCAAGTaGCATAGAGGTGAGGGCCCCAGAGGGAGGTGCAATCGACCTTTA | + |
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Preference number: 2 (lower is better) Translates to: TTHVKRKDTEVLLSK*HRGEGPRGRCNRPL Trigger: TAAAGGTCGATTGCACCTCCCTCTGGGGCCCTCACCTCTATGCAACTTGGAGAGAAGCACTTCTGTGTCTTTCCTTTTAACGTGGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGCTTGCATGTAGTTTGTaGTGCTGTGGGTCAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: LAHFSFTHFGKGIWGWLWLACSL*CCGSDS Trigger: TGAGTCTGACCCACAGCACCACAAACTACATGCAAG...CCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGCCAGTACTTGAGAGGTaGAAGCAAGACTCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LAHFSFTHFGKGIWGWLWPVLER*KQDSGV Trigger: AACTCCTGAGTCTTGCTTCCACCTCTCAAGTACTGG...CCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTCCCACTATCTTTCTaGGATACCTGTCTGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSHISVKAFGVGFGEVSLVPLSF*DTCLPR Trigger: TCTTGGCAGACAGGTATCTCAGAAAGATAGTGGGAC...AAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTCACTCTGAGGGGAGTTaGACACTCTCTGCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: TLSLTNKVFTVRETLLMTHSEGS*TLSAEL Trigger: CAGTTCTGCAGAGAGTGTTCAACTCCCCTCAGAGTG...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTCAGCCTTTCCCCCACTaGAATAAAGAGGAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TLSLTNKVFTVRETLLMTQPFPH*NKEEAS Trigger: AGAGGCTTCCTCTTTATTGCAGTGGGGGAAAGGCTG...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CCA 90 bp | TCAATGCACATGCAAGAGCCTACTATTTACTGGCTGAATAAACACACTTTCCCTTCTGCAGAACTGGGCTaGCCCACTTCAGTTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: SMHMQEPTIYWLNKHTFPSAELG*PTSVSH Trigger: GTGTGAAACTGAAGTGGGCCAGCCCAGTTCTGCAGA...AGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTGGTGTGCTTTTGGAATaGAATTGGACCATGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TLSLTNKVFTVRETLLMTGVLLE*NWTMSA Trigger: TGCAGACATGGTCCAATTTCATTCCAAAAGCACACC...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTACATTCTAAGAATCAGTaGGAAACAAAACAGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLHSKNQ*ETKQPQ Trigger: TTGTGGCTGTTTTGTTTCTCACTGATTCTTAGAATG...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTAAGGTCAGCCTGGGATaGCTAAGATCTATCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: TLSLTNKVFTVRETLLMTKVSLG*LRSISK Trigger: TTTTGAGATAGATCTTAGGCATCCCAGGCTGACCTT...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTAGTGAAAGCGTCTCTTaGATGTTTCACTATGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TLSLTNKVFTVRETLLMTSESVS*MFHYGV Trigger: CACACCATAGTGAAACATGCAAGAGACGCTTTCACT...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR GCA 72 bp | TGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTaGCTTGTGCTTTCCAGGAGCTCCAAGGCACCAATC | + |
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Preference number: 3 (lower is better) Translates to: CSHKVRAAQVPG*LVLSRSSKAPI Trigger: GATTGGTGCCTTGGAGCTCCTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR GCA 72 bp | CTTCCGCTGAGACATCTGCTCACACAAGGTAAGAGCTaGCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: LPLRHLLTQGKS*PGARLPCAFQE Trigger: CTCCTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAGATGTCTCAGCGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | GAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACTCTaGGGGGAGTTGAACACTCTCTGCAGAACTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: EEASPFPGQRPL*GELNTLCRTGL Trigger: CAGCCCAGTTCTGCAGAGAGTGTTCAACTCCCCTCAGAGTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | ATTGAGCAGCGGTGCTCTGTGTACCCAGCTTCAGAGTaGTATCCCCAGATGAACCACGGCTTTCCAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: IEQRCSVYPASE*YPQMNHGFPVF Trigger: GAACACTGGAAAGCCGTGGTTCATCTGGGGATATCACTCTGAAGCTGGGTACACAGAGCACCGCTGCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 72 bp | CGACAGACACGGGGCTTAGCCAGAACAGCAAAAGGATaGGGCGAGGTGAGAATGCATGTTGGAGAATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RQTRGLARTAKG*GEVRMHVGEFP Trigger: AGGAAATTCTCCAACATGCATTCTCACCTCGCCCCATCCTTTTGCTGTTCTGGCTAAGCCCCGTGTCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | GCTCTGTGTACCCAGCTTCAGAGTGATATCCCCAGATaGACCACGGCTTTCCAGTGTTCTTACAGACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: ALCTQLQSDIPR*TTAFQCSYRQL Trigger: CAGCTGTCTGTAAGAACACTGGAAAGCCGTGGTTCATCTGGGGATATCACTCTGAAGCTGGGTACACAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR GCA 72 bp | TCAGCACCACCCACGTTAAAAGGAAAGACACAGAAGTaGTTCTCTCCAAGTTGCATAGAGGTGAGGGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: SAPPTLKGKTQK*FSPSCIEVRAP Trigger: TGGGGCCCTCACCTCTATGCAACTTGGAGAGAAGCACTTCTGTGTCTTTCCTTTTAACGTGGGTGGTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | AAACAACCCGAGAGCAAAGAAGGCACTTTGAGATATTaGGCAGCGGTGCTCTGTGTACCCAGCTTCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: KQPESKEGTLRY*AAVLCVPSFRV Trigger: CACTCTGAAGCTGGGTACACAGAGCACCGCTGCTCAATATCTCAAAGTGCCTTCTTTGCTCTCGGGTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | AACAAGTTCACAGAGAATGCAGCTTACAGAGCGGGGTaGTGTGAGGTGTTGAGATATGGGCCAGTTCACTCC | + |
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Preference number: 3 (lower is better) Translates to: NKFTENAAYRAG*CEVLRYGPVHS Trigger: GGAGTGAACTGGCCCATATCTCAACACCTCACATCACCCCGCTCTGTAAGCTGCATTCTCTGTGAACTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 72 bp | GCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTaGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: AHFSFTHFGKGI*GWLWGSLTCVD Trigger: GTCAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CAA 90 bp | GTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTAGTCTTGCATGTAGTTaGTGGTGCTGTGGGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: VSHISVKAFGVGFGEVSLSLACS*WCCGSD Trigger: GTCTGACCCACAGCACCACAAACTACATGCAAGACT...AAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CAA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTACCCAGGGCCAACCATaGCTCATGGAATCTCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: TLSLTNKVFTVRETLLMTTQGQP*LMESLA Trigger: GGCTAGAGATTCCATGAGCAATGGTTGGCCCTGGGT...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR GCA 72 bp | GATGAACCACGGCTTTCCAGTGTTCTTACAGACAGCTaGCAGGTGACTTCTGGTAAAATACAGTCATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: DEPRLSSVLTDS*QVTSGKIQSSW Trigger: CCAAGATGACTGTATTTTACCAGAAGTCACCTGGCAGCTGTCTGTAAGAACACTGGAAAGCCGTGGTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CAA 90 bp | GTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTCCATACTTCAGTGTTTaGTGTATCTCAGTTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: VSHISVKAFGVGFGEVSLPYFSV*CISVHS Trigger: GCTGTGAACTGAGATACACAAAACACTGAAGTATGG...AAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR-3UTR CAA 90 bp | TCAATGCACATGCAAGAGCCTACTATTTACTGGCTGAATAAACACACTTTCCCTGTCAGACTCAGGGTCTaGCACATGCTAGCTAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SMHMQEPTIYWLNKHTFPVRLRV*HMLAKH Trigger: ATGCTTAGCTAGCATGTGCAAGACCCTGAGTCTGAC...AGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | TCCAAACTTGCATTCAAGACCAGGACCCTCTTCCAATaGAACATATATCAACCCCAGGCCTTTTCCTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SKLAFKTRTLFQ*NIYQPQAFSSR Trigger: TCTTGAGGAAAAGGCCTGGGGTTGATATATGTTTCATTGGAAGAGGGTCCTGGTCTTGAATGCAAGTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | GAGAACTTGGGTGGTTGGCCAAAAACTGGAAATAAGTaGAAGCGTCTCTTGCATGTTTCACTATGGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ENLGGWPKTGNK*KRLLHVSLWCA Trigger: AGCACACCATAGTGAAACATGCAAGAGACGCTTTCACTTATTTCCAGTTTTTGGCCAACCACCCAAGTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR CCA 72 bp | TTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTaGGGAAGTCTCACTTGTGTTGACTTCAAACCATTA | + |
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Preference number: 3 (lower is better) Translates to: FTHFGKGIWGWL*GSLTCVDFKPL Trigger: TAATGGTTTGAAGTCAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| 3UTR TCA 72 bp | GTCTCTTGCATGTTTCACTATGGTGTGCTTTTGGAATaGAATTGGACCATGTCTGCATATAAAAACACAACT | + |
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Preference number: 3 (lower is better) Translates to: VSCMFHYGVLLE*NWTMSAYKNTT Trigger: AGTTGTGTTTTTATATGCAGACATGGTCCAATTTCATTCCAAAAGCACACCATAGTGAAACATGCAAGAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS-3UTR TCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGGACAATCCAGGAAAGTaGGGACATCCCCGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLTQGKSCPGARLPCAFQDNPGK*GHPRWQ Trigger: TTGCCACCGGGGATGTCCTCACTTTCCTGGATTGTC...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS-3UTR CCA 90 bp | CTTTCCCCCACTGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACGCCCACGTGCGAGCATaGGTGGATCTCCAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAIKRKPLHFQVSAHAHVRA*VDLQLA Trigger: GGCAAGCTGGAGATCCACCCATGCTCGCACGTGGGC...GTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCAGTGGGGGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCCCACTGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACTCAGTTCCCCCTCGTTaGGCTGGAGTTTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAIKRKPLHFQVSAHSVPPR*AGVCLL Trigger: GAGCAAGCAAACTCCAGCTCAACGAGGGGGAACTGA...GTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCAGTGGGGGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGCTAAAACACTGTGAATaGTCCGAAGCAGAGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGKSCPGARLPCAFQLKHCE*SEAEWT Trigger: GGTCCACTCTGCTTCGGACCATTCACAGTGTTTTAG...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTACAGGCAGCTCTTGCCTaGCCAGGTCCACCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLQAALA*PGPPHG Trigger: GCCGTGAGGTGGACCTGGGCAGGCAAGAGCTGCCTG...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCCCACTGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACGGGACAGAATGCCACTaGAAGGTCAAACGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAIKRKPLHFQVSAHGTECH*KVKRQS Trigger: TGACTGGCGTTTGACCTTCCAGTGGCATTCTGTCCC...GTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCAGTGGGGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGAGTCATCCACCAAGATaGTCTCCTTTAAAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLTQGKSCPGARLPCAFQSHPPR*SPLKAQ Trigger: CTGTGCTTTTAAAGGAGATCATCTTGGTGGATGACT...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | CACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGAAGAGATGCCCATGCTaGGGATGGCTCCGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HISVKAFGVGFGEVSLVLKRCPC*GWLRAS Trigger: GCTGGCACGGAGCCATCCGCAGCATGGGCATCTCTT...CAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | CACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGCCATGGTGGGGGACCTaGTGGGGTCAATTCTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: HISVKAFGVGFGEVSLVLPWWGT*WGQFLT Trigger: CGTCAAGAATTGACCCCATCAGGTCCCCCACCATGG...CAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | CACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGAGCACTCGGAAGAGATaGCCATGCTGCGGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HISVKAFGVGFGEVSLVLSTRKR*PCCGWL Trigger: GAGCCATCCGCAGCATGGGCATCTCTTCCGAGTGCT...CAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCCCACTGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACATTCAAAGAACTGATTaGCTCCTTGACCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAIKRKPLHFQVSAHIQRTD*LLDRGI Trigger: GATGCCACGGTCAAGGAGGCAATCAGTTCTTTGAAT...GTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCAGTGGGGGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGCAAACCCACCAATCATaGGCTCCCCGGTCTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HISVKAFGVGFGEVSLVLQTHQS*APRSAC Trigger: ACATGCAGACCGGGGAGCCCATGATTGGTGGGTTTG...CAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | TCAATGCACATGCAAGAGCCTACTATTTACTGGCTGAATAAACACACTTTCCCTGCAGCAGGCAGCTCTTaGCTGCCCAGGTCCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMHMQEPTIYWLNKHTFPAAGSS*LPRSTS Trigger: TGAGGTGGACCTGGGCAGGCAAGAGCTGCCTGCTGC...AGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCCCACTGCAATAAAGAGGAAGCCTCTCCATTTCCAGGTCAGCGCCCACAAGAGCATGGGAATCTaGAGGGGGCTTTATATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAIKRKPLHFQVSAHKSMGI*RGLYIK Trigger: CTTTATATAAAGCCCCCTGCAGATTCCCATGCTCTT...GTGGGCGCTGACCTGGAAATGGAGAGGCTTCCTCTTTATTGCAGTGGGGGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | GTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGAGCTGGAGTTTGCTTaGTCTCCCCCATTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSHISVKAFGVGFGEVSLELEFA*SPPFPK Trigger: CTTGGGGAATGGGGGAGAGCAAGCAAACTCCAGCTC...AAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGTCACACGTTTTCATATaGACACTAGGTCGGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LAHFSFTHFGKGIWGWLWSHVFI*TLGRPS Trigger: CGAGGGCCGACCTAGTGTCCATATGAAAACGTGTGA...CCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGTGTTACACTCACAGTaGCAATCCAGGAAAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHFSFTHFGKGIWGWLWVLHSQ*QSRKVR Trigger: CCTCACTTTCCTGGATTGTCACTGTGAGTGTAACAC...CCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTAGATGGGGTCAATTCTTaGCGTTCGCCTGTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLDGVNS*RSPVPF Trigger: GAAAGGGACAGGCGAACGTCAAGAATTGACCCCATC...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTGTTTTGTGTATCTCAGTTCACAGCAGCTTTCTTTAAGGAGTTGCAGGTCCCCCTCGTTGAGCTaGAGTTTGCTTGCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQCFVYLSSQQLSLRSCRSPSLS*SLLALP Trigger: GGGGAGAGCAAGCAAACTCCAGCTCAACGAGGGGGA...CCTGCAACTCCTTAAAGAAAGCTGCTGTGAACTGAGATACACAAAACACTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTGTTTTGTGTATCTCAGTTCACAGCAGCTTTCTTTAAGGAGTTGCAGGTCCTCTATGTGGCGGTaGAGGGAGATCCTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQCFVYLSSQQLSLRSCRSSMWR*REILSL Trigger: CAGTGACAGGATCTCCCTGCACCGCCACATAGAGGA...CCTGCAACTCCTTAAAGAAAGCTGCTGTGAACTGAGATACACAAAACACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTAGCAAACAGTCCTCCTaGCATGGTGGGGGACCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLTNKVFTVRETLLMTSKQSS*HGGGPD Trigger: ATCAGGTCCCCCACCATGGCAGGAGGACTGTTTGCT...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTACTTTTATCCTCTATGTaGCGGTGCAGGGAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLLLSSM*RCREIL Trigger: CAGGATCTCCCTGCACCGCCACATAGAGGATAAAAG...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTTATTCTGTAGGAAGTTaGGGCGAGCATAGGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSLTNKVFTVRETLLMTYSVGS*GEHRAR Trigger: GCGCGCCCTATGCTCGCCCCAACTTCCTACAGAATA...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | CACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTGTGTTGGAAAATACTTCTTGCTaGCAGCAAACAGTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HISVKAFGVGFGEVSLVLENTSC*QQTVLL Trigger: CAGGAGGACTGTTTGCTGTCAGCAAGAAGTATTTTC...CAACACAAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCACTTCAGTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGTCAAACCTCCAGAGCTaGTTTTTATCAAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHFSFTHFGKGIWGWLWSNLQS*FLSRAS Trigger: TGATGCCCTTGATAAAAACCAGCTCTGGAGGTTTGA...CCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAACTGAAGTGGGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | GTTTCACACATTTCGGTAAAGGCATTTGGGGTTGGCTTTGGGGAAGTCTCACTTCACACTGCCAAACCCTaGAAGACAACTCAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSHISVKAFGVGFGEVSLHTAKP*KTTQGF Trigger: AAAACCTTGAGTTGTCTTTCAGGGTTTGGCAGTGTG...AAGTGAGACTTCCCCAAAGCCAACCCCAAATGCCTTTACCGAAATGTGTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTATCAATAAGTTCTTCTTaGTGCTTCAGTTCCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLSISSS*CFSSPS Trigger: CGAGGGGGAACTGAAGCAGCAAGAAGAACTTATTGA...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | ATGAAACATATATCAACCCCAGGCCTTTTCCTCAAGATCAAATTTCTTCAACTTGGTGGATCTCCAGCTTaGCGCCACACTGCCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MKHISTPGLFLKIKFLQLGGSPA*RHTAKP Trigger: GGGTTTGGCAGTGTGGCGGCAAGCTGGAGATCCACC...AAGTTGAAGAAATTTGATCTTGAGGAAAAGGCCTGGGGTTGATATATGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| 3UTR CAA 72 bp | TGTATATTTCCCTTAAATAAAACCCAGGGCCAACCATaGCTCATGGAATCTCTAGCCAGGTGGGTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CIFPLNKTQGQP*LMESLARWVVH Trigger: ATGGACCACCCACCTGGCTAGAGATTCCATGAGCAATGGTTGGCCCTGGGTTTTATTTAAGGGAAATATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTCCAAATGATGTTCACTaGAACTGGGAGCCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLTNKVFTVRETLLMTPNDVH*NWEPVF Trigger: AAAGACGGGCTCCCAGTTCCAGTGAACATCATTTGG...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR GCA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTTGCCAGTGTCATAGGTaGCCAGGTACTGAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLTNKVFTVRETLLMTCQCHR*PGTENT Trigger: AGTATTTTCAGTACCTGGGCACCTATGACACTGGCA...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR TCA 90 bp | TCAATGCACATGCAAGAGCCTACTATTTACTGGCTGAATAAACACACTTTCCCTGTTTCTAAAACACTGTaGATGGTCCGAAGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMHMQEPTIYWLNKHTFPVSKTL*MVRSRV Trigger: CACTCTGCTTCGGACCATTCACAGTGTTTTAGAAAC...AGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CCA 90 bp | ATGAAACATATATCAACCCCAGGCCTTTTCCTCAAGATCAAATTTCTTCAACTTTGTAGTGGAACTTCTTaGCTTTACACTCATACATTC | + |
|
Preference number: 4 (lower is better) Translates to: MKHISTPGLFLKIKFLQLCSGTS*LYTHTF Trigger: GAATGTATGAGTGTAAAGCCAAGAAGTTCCACTACA...AAGTTGAAGAAATTTGATCTTGAGGAAAAGGCCTGGGGTTGATATATGTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| 3UTR CAA 72 bp | TGTGTATCTCAGTTCACAGCAGCTTTCTTTAAGGAGTaGCAGGAGACCATATTGACAAAGCTTTTAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CVSQFTAAFFKE*QETILTKLLNK Trigger: TTTATTTAAAAGCTTTGTCAATATGGTCTCCTGCAACTCCTTAAAGAAAGCTGCTGTGAACTGAGATACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS CCA 90 bp | GCGCGGTATTCTGTAGGAAGTTGGGGCGAGCATAGGGCGCGCGCTTaGGAAACACGTGGCCCACGTGCGAGCATGGGTGGATCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARYSVGSWGEHRARA*ETRGPRASMGGSPA Trigger: AGCTGGAGATCCACCCATGCTCGCACGTGGGCCACGTGTTTCCCAAGCGCGCGCCCTATGCTCGCCCCAACTTCCTACAGAATACCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS GCA 90 bp | TGTTGTCGGGAGCGTTATAATCTAAGCACTCGGAAGAGATGCCCATaGTGCGGATGGCTCCGTGCCAGCCAGGTCTATCCTCGGGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: CCRERYNLSTRKRCP*CGWLRASQVYPRGR Trigger: ACGTCCCCGAGGATAGACCTGGCTGGCACGGAGCCATCCGCAGCATGGGCATCTCTTCCGAGTGCTTAGATTATAACGCTCCCGACAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACACAAGGTAAGAGCTGCCCAGGTGCCCGGCTGCCTTGTGCTTTCCAGTTCAGTTCCCCCTCGTaGAGCTGGAGTTTGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTQGKSCPGARLPCAFQFSSPS*SWSLLA Trigger: AGCAAGCAAACTCCAGCTCAACGAGGGGGAACTGAA...CTGGAAAGCACAAGGCAGCCGGGCACCTGGGCAGCTCTTACCTTGTGTGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS CCA 90 bp | CTTGACGTTCGCCTGTCCCTTTCATGTTTGGGGACAGAATGCCACTaGAAGGTCAAACGCCAGTCAAACCCACCAATCATGGGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LDVRLSLSCLGTECH*KVKRQSNPPIMGSP Trigger: CGGGGAGCCCATGATTGGTGGGTTTGACTGGCGTTTGACCTTCCAGTGGCATTCTGTCCCCAAACATGAAAGGGACAGGCGAACGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS GCA 90 bp | TCAATTCTTGACGTTCGCCTGTCCCTTTCATGTTTGGGGACAGAATaGCACTGGAAGGTCAAACGCCAGTCAAACCCACCAATCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SILDVRLSLSCLGTE*HWKVKRQSNPPIMG Trigger: GCCCATGATTGGTGGGTTTGACTGGCGTTTGACCTTCCAGTGGCATTCTGTCCCCAAACATGAAAGGGACAGGCGAACGTCAAGAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | ATGAAACATATATCAACCCCAGGCCTTTTCCTCAAGATCAAATTTCTTCAACTTAGCAGCAGGCAGCTCTaGCCTGCCCAGGTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: MKHISTPGLFLKIKFLQLSSRQL*PAQVHL Trigger: GAGGTGGACCTGGGCAGGCAAGAGCTGCCTGCTGCT...AAGTTGAAGAAATTTGATCTTGAGGAAAAGGCCTGGGGTTGATATATGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | ACACTTTCCCTTACAAACAAGGTGTTTACGGTTAGAGAGACCCTTCTGATGACTTCGTTGAGCTGGAGTTaGCTTGCTCTCCCCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLTNKVFTVRETLLMTSLSWS*LALPHS Trigger: GGAATGGGGGAGAGCAAGCAAACTCCAGCTCAACGA...AGTCATCAGAAGGGTCTCTCTAACCGTAAACACCTTGTTTGTAAGGGAAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTCTCAATTGCATCCATTTAATTCTCTCATGCGACAGACACGGGGCTTAGAACTGATTGCCTCCTaGACCGTGGCATCCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: VPSQLHPFNSLMRQTRGLELIAS*TVASKQ Trigger: TTGTTTGGATGCCACGGTCAAGGAGGCAATCAGTTC...TAAGCCCCGTGTCTGTCGCATGAGAGAATTAAATGGATGCAATTGAGAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTGTTTTGTGTATCTCAGTTCACAGCAGCTTTCTTTAAGGAGTTGCAGGCTGTCCCTTTCATGTTaGGGGACAGAATGCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQCFVYLSSQQLSLRSCRLSLSC*GTECHW Trigger: CCAGTGGCATTCTGTCCCCAAACATGAAAGGGACAG...CCTGCAACTCCTTAAAGAAAGCTGCTGTGAACTGAGATACACAAAACACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS-3UTR CAA 90 bp | TCAATGCACATGCAAGAGCCTACTATTTACTGGCTGAATAAACACACTTTCCCTCTCAATAAGTTCTTCTaGCTGCTTCAGTTCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SMHMQEPTIYWLNKHTFPLNKFF*LLQFPL Trigger: GAGGGGGAACTGAAGCAGCAAGAAGAACTTATTGAG...AGGGAAAGTGTGTTTATTCAGCCAGTAAATAGTAGGCTCTTGCATGTGCATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS CCA 72 bp | TCTGTAGGAAGTTGGGGCGAGCATAGGGCGCGCGCTTaGGAAACACGTGGCCCACGTGCGAGCATGGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVGSWGEHRARA*ETRGPRASMGG Trigger: TCCACCCATGCTCGCACGTGGGCCACGTGTTTCCCAAGCGCGCGCCCTATGCTCGCCCCAACTTCCTACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS CCA 72 bp | ACACTTCGGCCGCCCGCGCGGTATTCTGTAGGAAGTTaGGGCGAGCATAGGGCGCGCGCTTGGGAAACACGT | + |
|
Preference number: 6 (lower is better) Translates to: TLRPPARYSVGS*GEHRARAWETR Trigger: ACGTGTTTCCCAAGCGCGCGCCCTATGCTCGCCCCAACTTCCTACAGAATACCGCGCGGGCGGCCGAAGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
||
| CDS GCA 72 bp | TGTCGGGAGCGTTATAATCTAAGCACTCGGAAGAGATaGCCATGCTGCGGATGGCTCCGTGCCAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CRERYNLSTRKR*PCCGWLRASQV Trigger: GACCTGGCTGGCACGGAGCCATCCGCAGCATGGGCATCTCTTCCGAGTGCTTAGATTATAACGCTCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS GCA 72 bp | GAGCGTTATAATCTAAGCACTCGGAAGAGATGCCCATaGTGCGGATGGCTCCGTGCCAGCCAGGTCTATCCT | + |
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Preference number: 6 (lower is better) Translates to: ERYNLSTRKRCP*CGWLRASQVYP Trigger: AGGATAGACCTGGCTGGCACGGAGCCATCCGCAGCATGGGCATCTCTTCCGAGTGCTTAGATTATAACGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS TCA 72 bp | TGTCATAGGTGCCCAGGTACTGAAAATACTTCTTGCTaGCAGCAAACAGTCCTCCTGCCATGGTGGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: CHRCPGTENTSC*QQTVLLPWWGT Trigger: GGTCCCCCACCATGGCAGGAGGACTGTTTGCTGTCAGCAAGAAGTATTTTCAGTACCTGGGCACCTATGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS CAA 90 bp | GACCTGATGGGGTCAATTCTTGACGTTCGCCTGTCCCTTTCATGTTaGGGGACAGAATGCCACTGGAAGGTCAAACGCCAGTCAAACCCA | + |
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Preference number: 6 (lower is better) Translates to: DLMGSILDVRLSLSC*GTECHWKVKRQSNP Trigger: TGGGTTTGACTGGCGTTTGACCTTCCAGTGGCATTCTGTCCCCAAACATGAAAGGGACAGGCGAACGTCAAGAATTGACCCCATCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS CCA 72 bp | ACTGGAAGGTCAAACGCCAGTCAAACCCACCAATCATaGGCTCCCCGGTCTGCATGTAGAATTCGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: TGRSNASQTHQS*APRSACRIRKC Trigger: ACACTTTCGAATTCTACATGCAGACCGGGGAGCCCATGATTGGTGGGTTTGACTGGCGTTTGACCTTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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| CDS CCA 72 bp | CCTTTCAGAAAGATCGCCATAGGCCTCTTTCCGAGCTaGGGGGTTTCGGTTATAGAAATGCTCTTTGTATTC | + |
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Preference number: 6 (lower is better) Translates to: PFRKIAIGLFPS*GVSVIEMLFVF Trigger: GAATACAAAGAGCATTTCTATAACCGAAACCCCCCAGCTCGGAAAGAGGCCTATGGCGATCTTTCTGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161240.4 |
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