Pregenerated sensors for GALNT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026994Ensembl transcript IDs: ENSMUST00000028378.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTaGTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCAGCGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LFYIWTFQNRLWYSS*CAFRQKPQGFCSGS Trigger: AGAACCGCTGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| 3UTR CCA 90 bp | GGATGCTCTCCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTaGACAAAACTGAAACAAAGATTTGTAATTGTGTTTAGGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: GCSPPAAINYKSCSN*TKLKQRFVIVFRVL Trigger: AAGAACCCTAAACACAATTACAAATCTTTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGGAGAGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| 3UTR GCA 72 bp | GGATGCTCTCCGCCCGCCGCCATCAATTACAAATCTTaGTCCAACTGGACAAAACTGAAACAAAGATTTGTA | + |
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Preference number: 3 (lower is better) Translates to: GCSPPAAINYKS*SNWTKLKQRFV Trigger: TACAAATCTTTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGGAGAGCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| 3UTR GCA 72 bp | ATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTaGTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: IWTFQNRLWYSS*CAFRQKPQGFC Trigger: GCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| 3UTR CCA 72 bp | GAAAACACACAGTATAGTCACTTCAGAAAAGCTATTTaGGGAAGACTCATGTGCATCAAGTGGAGTGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: ENTQYSHFRKAI*GRLMCIKWSGL Trigger: AAGCCCACTCCACTTGATGCACATGAGTCTTCCCCAAATAGCTTTTCTGAAGTGACTATACTGTGTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| 3UTR CCA 72 bp | TCTCTCTTCTACATCTGGACATTTCAGAATCGTCTTTaGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: SLFYIWTFQNRL*YSSCCAFRQKP Trigger: GGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCACGCTCTTTCTCCTTCTaGTCCTCCGGGCTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSARSFSF*SSGLRW Trigger: CCACCTCAGCCCGGAGGAGCAGAAGGAGAAAGAGCG...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTGGACAAAACTGAAACAAAGTTCTCAGCTATCCTaGCCAGCAGAGGTTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PPAAINYKSCSNWTKLKQSSQLS*PAEVPA Trigger: GGCTGGAACCTCTGCTGGCCAGGATAGCTGAGAACT...TTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTGGACAAAACTGAAACAATTCCACGGTTATGGTTaGTTCCGTACGGAGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PPAAINYKSCSNWTKLKQFHGYG*FRTEKA Trigger: AGCCTTCTCCGTACGGAAGCAACCATAACCGTGGAA...TTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCATCTGCAAGGCGAACTTaGTTACGAGCAATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSASARRT*LRAITC Trigger: GCAGGTGATTGCTCGTAACCAAGTTCGCCTTGCAGA...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTGCCAGAAGCACCAGGTaGGTTAGAATCCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAARSTR*VRILRW Trigger: CCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGC...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTGGACAAAACTGAAACAAAATGGTTTGCCTCCCTaGTTATTCTCACCAACATCC | + |
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Preference number: 4 (lower is better) Translates to: PPAAINYKSCSNWTKLKQNGLPP*LFSPTS Trigger: GGATGTTGGTGAGAATAACCAGGGAGGCAAACCATT...TTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTGGACAAAACTGAAACAAAGGTATGAGGGCTTTTaGTGCGAAAAACATGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PPAAINYKSCSNWTKLKQRYEGF*CEKHVQ Trigger: TTGGACATGTTTTTCGCAGCAAAAGCCCTCATACCT...TTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | ACAGAAACCCCAGGGTTTCTGCAGCGGTTCTACATAGACATCTTAAGATATAAACAGCAGTATGGCAGGTaGAGAATAGAGCACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: TETPGFLQRFYIDILRYKQQYGR*RIEHTV Trigger: CACAGTGTGCTCTATTCTTCACCTGCCATACTGCTG...TTTATATCTTAAGATGTCTATGTAGAACCGCTGCAGAAACCCTGGGGTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCAGGCACTAAGTTTGGATaGTCTCCATTTGATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSAGTKFG*SPFDER Trigger: CCTTTCATCAAATGGAGAGCATCCAAACTTAGTGCC...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTTTCAATACATTCAGGTaGTCGGGTGTCAGGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAFNTFR*SGVRPK Trigger: CTTGGGCCTGACACCCGACCACCTGAATGTATTGAA...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCAGACCATGCTTCATTGTaGAAGACTATTATGACACTG | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSADHASL*KTIMTL Trigger: CAGTGTCATAATAGTCTTTCACAATGAAGCATGGTC...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGCTCATGATCAGGAAGTaGCTCCCAGCCAAAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLLMIRK*LPAKGK Trigger: CTTTCCTTTGGCTGGGAGTCACTTCCTGATCATGAG...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGGGCATAATCTCCAACTaGCCACCACATTGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLGIISN*PPHCHT Trigger: AGTGTGGCAATGTGGTGGGCAGTTGGAGATTATGCC...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGGAGCAATCACCTGCGTaGCTTTTGGGAAGGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLEQSPA*LLGRYE Trigger: CTCATACCTTCCCAAAAGGCACGCAGGTGATTGCTC...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGCACCTGCGTGCCTTTTaGGAAGGTATGAGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLHLRAF*EGMRAF Trigger: AAAAGCCCTCATACCTTCCCAAAAGGCACGCAGGTG...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCAACGGAGAAGGCTTGTTaGATTCAAATGTGTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSATEKAC*IQMCLD Trigger: ATCTAAACACATTTGAATTCAACAAGCCTTCTCCGT...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CACACTGTAAACATCTCTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTACGAGCAATCACCTaGGTGCCTTTTGGGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: HTVNISLLHLDISESSLVLRAIT*VPFGKV Trigger: TACCTTCCCAAAAGGCACGCAGGTGATTGCTCGTAA...TACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAGAGATGTTTACAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGAACAGGATTAAGGTCTaGCACATACGCTTCCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLNRIKV*HIRFRV Trigger: TACCCGGAAGCGTATGTGCCAGACCTTAATCCTGTT...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTAAATTTCCACGGTTATaGTTGCTTCCGTACGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAKFPRL*LLPYGE Trigger: TTCTCCGTACGGAAGCAACCATAACCGTGGAAATTT...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCACTAAAAATCCATTTTTaGAGTAGATCTGTTGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: VFGILVAVLSDRNPRVSALKIHF*SRSVAS Trigger: TGACGCAACAGATCTACTCCAAAAATGGATTTTTAG...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGTCCTCCTTGGAATACTaGACACTTACTTCTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLSSLEY*TLTSLC Trigger: GCAAAGAGAAGTAAGTGTTCAGTATTCCAAGGAGGA...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTAAAGAAAAAGATGACTaGACCCAGCTTCCAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAKEKDD*TQLPEL Trigger: AAGTTCTGGAAGCTGGGTGCAGTCATCTTTTTCTTT...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGAAGCAGCGTGGACCATaGTTCATTGTGAAAGACTAT | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLKQRGP*FIVKDY Trigger: ATAGTCTTTCACAATGAAGCATGGTCCACGCTGCTT...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTTATGAGGGCTTTTGCTaGGAAAAACATGTCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAYEGFC*EKHVQQ Trigger: TTGTTGGACATGTTTTTCGCAGCAAAAGCCCTCATA...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CATAATTTTCAACAACTACAGTGTATGCCTAGTCACAGTTTTATGAGGAAGAGTAGACACAGCTCCTTCTaGATGTTGTGCCGGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: HNFQQLQCMPSHSFMRKSRHSSF*MLCRIS Trigger: TGAAATCCGGCACAACATCCAGAAGGAGCTGTGTCT...ACTCTTCCTCATAAAACTGTGACTAGGCATACACTGTAGTTGTTGAAAATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR TCA 90 bp | CATAATTTTCAACAACTACAGTGTATGCCTAGTCACAGTTTTATGAGGAAGAGTGTTCCTCTCCATCTTTaGTTCCTCCTTGGAATACTG | + |
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Preference number: 4 (lower is better) Translates to: HNFQQLQCMPSHSFMRKSVPLHL*FLLGIL Trigger: CAGTATTCCAAGGAGGAATCAAAGATGGAGAGGAAC...ACTCTTCCTCATAAAACTGTGACTAGGCATACACTGTAGTTGTTGAAAATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGATGTGTTTAGATCTATaGATGCGATGTCTGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLMCLDL*MRCLDS Trigger: TGAGTCCAGACATCGCATCCATAGATCTAAACACAT...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CCA 90 bp | CATAATTTTCAACAACTACAGTGTATGCCTAGTCACAGTTTTATGAGGAAGAGTGGTGGGGGTCTTAATTaGGTAGGTTTCATCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HNFQQLQCMPSHSFMRKSGGGLN*VGFIFP Trigger: AGGAAAGATGAAACCTACCCAATTAAGACCCCCACC...ACTCTTCCTCATAAAACTGTGACTAGGCATACACTGTAGTTGTTGAAAATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGCTTAACGATTTTTGCTaGATCTGTGTTTCTCCTATA | + |
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Preference number: 4 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLLNDFC*ICVSPI Trigger: TATAGGAGAAACACAGATGCAGCAAAAATCGTTAAG...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 90 bp | GTTCCAGCCAGCCATAGAAGCACTCACAGTGAGCATCTAAGAACGTaGGCGTCTCGGCAGTTGCTACAGCTGCCCCTAGCAACCGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: VPASHRSTHSEHLRT*ASRQLLQLPLATAR Trigger: CCGCGCGGTTGCTAGGGGCAGCTGTAGCAACTGCCGAGACGCTCACGTTCTTAGATGCTCACTGTGAGTGCTTCTATGGCTGGCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 90 bp | CGGGCTGAGGTGGGTGATCTTAAACGGCTTGCCAGAAGCACCAGGTaGGTTAGAATCCTGAGGTGGGCGATCAAAAACCGGCTTCAACTC | + |
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Preference number: 5 (lower is better) Translates to: RAEVGDLKRLARSTR*VRILRWAIKNRLQL Trigger: GAGTTGAAGCCGGTTTTTGATCGCCCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGCAAGCCGTTTAAGATCACCCACCTCAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 90 bp | CTTAAACGGCTTGCCAGAAGCACCAGGTGCGTTAGAATCCTGAGGTaGGCGATCAAAAACCGGCTTCAACTCCGCGGCTGTGTAGTACCC | + |
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Preference number: 5 (lower is better) Translates to: LKRLARSTRCVRILR*AIKNRLQLRGCVVP Trigger: GGGTACTACACAGCCGCGGAGTTGAAGCCGGTTTTTGATCGCCCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGCAAGCCGTTTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 90 bp | TATCTGTTCTCCAGGGGCGATGGTCCTGTGACCTTTATAGACACATaGCTTCAGCTGGACGACACCCTGAGTAGCATGAAGACACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: YLFSRGDGPVTFIDT*LQLDDTLSSMKTQL Trigger: GAGCTGTGTCTTCATGCTACTCAGGGTGTCGTCCAGCTGAAGGCATGTGTCTATAAAGGTCACAGGACCATCGCCCCTGGAGAACAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 90 bp | GAAGTTGGTCCTTCCGAATCTCCCATATCTGTTCTCCAGGGGCGATaGTCCTGTGACCTTTATAGACACATGCCTTCAGCTGGACGACAC | + |
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Preference number: 5 (lower is better) Translates to: EVGPSESPISVLQGR*SCDLYRHMPSAGRH Trigger: GTGTCGTCCAGCTGAAGGCATGTGTCTATAAAGGTCACAGGACCATCGCCCCTGGAGAACAGATATGGGAGATTCGGAAGGACCAACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | GTCTTTGGTATTCTAGTTGCTGTGCTTTCAGACAGAAACCCCAGGGTTTCTGCATTTCCACGGTTATGGTaGCTTCCGTACGGAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: VFGILVAVLSDRNPRVSAFPRLW*LPYGEG Trigger: GCCTTCTCCGTACGGAAGCAACCATAACCGTGGAAA...TGCAGAAACCCTGGGGTTTCTGTCTGAAAGCACAGCAACTAGAATACCAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CCCAAGTGTACAACCACACCTCACTTTACTAAGGAAATTATTTTCTTCACACTGGGCTGTGTAGTACCCTaGCAGACAGGGTCTCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: PKCTTTPHFTKEIIFFTLGCVVP*QTGSLA Trigger: CGCGAGAGACCCTGTCTGCAAGGGTACTACACAGCC...CAGTGTGAAGAAAATAATTTCCTTAGTAAAGTGAGGTGTGGTTGTACACTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CCGCCCGCCGCCATCAATTACAAATCTTGCTCCAACTGGACAAAACTGAAACAACACATGGCACTAAGTTaGGATGCTCTCCATTTGATG | + |
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Preference number: 5 (lower is better) Translates to: PPAAINYKSCSNWTKLKQHMALS*DALHLM Trigger: CATCAAATGGAGAGCATCCAAACTTAGTGCCATGTG...TTGTTTCAGTTTTGTCCAGTTGGAGCAAGATTTGTAATTGATGGCGGCGGGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTCTCTGCAAGGCGAACTaGGTTACGAGCAATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: LFYIWTFQNRLWYSSCCALCKAN*VTSNHL Trigger: CAGGTGATTGCTCGTAACCAAGTTCGCCTTGCAGAG...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 90 bp | GGTCTCTCGCGGACGTCGATATTCTCCTTAATGGGCGCTCCTATTTaGATCTTTGGCATTGCATCTTTAATATTATTTACAGCTTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: GLSRTSIFSLMGAPI*IFGIASLILFTASS Trigger: GCTCGAAGCTGTAAATAATATTAAAGATGCAATGCCAAAGATGCAAATAGGAGCGCCCATTAAGGAGAATATCGACGTCCGCGAGAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CACACTGTAAACATCTCTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATCACCTGCGTGCCTTTaGGGAAGGTATGAGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HTVNISLLHLDISESSLVSPACL*GRYEGF Trigger: AAAGCCCTCATACCTTCCCAAAAGGCACGCAGGTGA...TACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAGAGATGTTTACAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CACACTGTAAACATCTCTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATCACTTGCAAAGGCGTaGAAGCAGTGCTTCGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: HTVNISLLHLDISESSLVSLAKA*KQCFVS Trigger: GGAAACGAAGCACTGCTTCAACGCCTTTGCAAGTGA...TACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAGAGATGTTTACAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 90 bp | CAAAATTTCCACGGTTATGGTTGCTTCCGTACGGAGAAGGCTTGTTaGATTCAAATGTGTTTAGATCTATGGATGCGATGTCTGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: QNFHGYGCFRTEKAC*IQMCLDLWMRCLDS Trigger: TGAGTCCAGACATCGCATCCATAGATCTAAACACATTTGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTGGAAATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 90 bp | TTGACCCACACTCTTAATATATCCAGATATAACAGGATTAAGGTCTaGCACATACGCTTCCGGGTAAATAGTGTTCAGGTACCAGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LTHTLNISRYNRIKV*HIRFRVNSVQVPGK Trigger: TTTACCTGGTACCTGAACACTATTTACCCGGAAGCGTATGTGCCAGACCTTAATCCTGTTATATCTGGATATATTAAGAGTGTGGGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 90 bp | GCGGACGTCGATATTCTCCTTAATGGGCGCTCCTATTTGCATCTTTaGCATTGCATCTTTAATATTATTTACAGCTTCGAGCATAAAATC | + |
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Preference number: 5 (lower is better) Translates to: ADVDILLNGRSYLHL*HCIFNIIYSFEHKI Trigger: GATTTTATGCTCGAAGCTGTAAATAATATTAAAGATGCAATGCCAAAGATGCAAATAGGAGCGCCCATTAAGGAGAATATCGACGTCCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CATAATTTTCAACAACTACAGTGTATGCCTAGTCACAGTTTTATGAGGAAGAGTCAGGCCTTTCCTTTCTaGCTGCCTGACTATTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: HNFQQLQCMPSHSFMRKSQAFPF*LPDYFH Trigger: GTGAAAATAGTCAGGCAGCAAGAAAGGAAAGGCCTG...ACTCTTCCTCATAAAACTGTGACTAGGCATACACTGTAGTTGTTGAAAATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CACACTGTAAACATCTCTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTACCGTACGGAGAAGGCTaGTTGAATTCAAATGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: HTVNISLLHLDISESSLVPYGEG*LNSNVF Trigger: AAACACATTTGAATTCAACAAGCCTTCTCCGTACGG...TACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAGAGATGTTTACAGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CTCTTCTACATCTGGACATTTCAGAATCGTCTTTGGTATTCTAGTTGCTGTGCTTTCATCTTTCCTTCTTaGCTTCTCATGATCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LFYIWTFQNRLWYSSCCAFIFPS*LLMIRK Trigger: CTTCCTGATCATGAGAAGCAAAGAAGGAAAGATGAA...AGCACAGCAACTAGAATACCAAAGACGATTCTGAAATGTCCAGATGTAGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS-3UTR CAA 90 bp | CATAATTTTCAACAACTACAGTGTATGCCTAGTCACAGTTTTATGAGGAAGAGTTACAGAATCAATGGTTaGCCTCCCTGGTTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HNFQQLQCMPSHSFMRKSYRING*PPWLFS Trigger: TGAGAATAACCAGGGAGGCAAACCATTGATTCTGTA...ACTCTTCCTCATAAAACTGTGACTAGGCATACACTGTAGTTGTTGAAAATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 90 bp | GTCGATATTCTCCTTAATGGGCGCTCCTATTTGCATCTTTGGCATTaGATCTTTAATATTATTTACAGCTTCGAGCATAAAATCCAACAT | + |
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Preference number: 5 (lower is better) Translates to: VDILLNGRSYLHLWH*IFNIIYSFEHKIQH Trigger: ATGTTGGATTTTATGCTCGAAGCTGTAAATAATATTAAAGATGCAATGCCAAAGATGCAAATAGGAGCGCCCATTAAGGAGAATATCGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 72 bp | AACGGCTTGCCAGAAGCACCAGGTGCGTTAGAATCCTaGGGTGGGCGATCAAAAACCGGCTTCAACTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: NGLPEAPGALES*GGRSKTGFNSA Trigger: CGCGGAGTTGAAGCCGGTTTTTGATCGCCCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGCAAGCCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 72 bp | CTTGCCAGAAGCACCAGGTGCGTTAGAATCCTGAGGTaGGCGATCAAAAACCGGCTTCAACTCCGCGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LARSTRCVRILR*AIKNRLQLRGC Trigger: ACAGCCGCGGAGTTGAAGCCGGTTTTTGATCGCCCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 72 bp | AGGCCCAAGGTCCCGGTGCAGAGAAATTCTGTCACTTaGAAAGGCGTTGAAGCAGTGCTTCGTTTCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RPKVPVQRNSVT*KGVEAVLRFPS Trigger: CGAGGGGAAACGAAGCACTGCTTCAACGCCTTTGCAAGTGACAGAATTTCTCTGCACCGGGACCTTGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 72 bp | AAAAACCGGCTTCAACTCCGCGGCTGTGTAGTACCCTaGCAGACAGGGTCTCTCGCGGACGTCGATATTCTC | + |
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Preference number: 6 (lower is better) Translates to: KNRLQLRGCVVP*QTGSLADVDIL Trigger: GAGAATATCGACGTCCGCGAGAGACCCTGTCTGCAAGGGTACTACACAGCCGCGGAGTTGAAGCCGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 72 bp | AGCCATAGAAGCACTCACAGTGAGCATCTAAGAACGTaGGCGTCTCGGCAGTTGCTACAGCTGCCCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SHRSTHSEHLRT*ASRQLLQLPLA Trigger: TGCTAGGGGCAGCTGTAGCAACTGCCGAGACGCTCACGTTCTTAGATGCTCACTGTGAGTGCTTCTATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 72 bp | GTGGGTGATCTTAAACGGCTTGCCAGAAGCACCAGGTaGGTTAGAATCCTGAGGTGGGCGATCAAAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: VGDLKRLARSTR*VRILRWAIKNR Trigger: CCGGTTTTTGATCGCCCACCTCAGGATTCTAACGCACCTGGTGCTTCTGGCAAGCCGTTTAAGATCACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 72 bp | CCCGGTGCAGAGAAATTCTGTCACTTGCAAAGGCGTTaGAGCAGTGCTTCGTTTCCCCTCGCTCTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGAEKFCHLQRR*SSASFPLALSP Trigger: AGGAGAAAGAGCGAGGGGAAACGAAGCACTGCTTCAACGCCTTTGCAAGTGACAGAATTTCTCTGCACCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 72 bp | CTGCAAGGCGAACTTGGTTACGAGCAATCACCTGCGTaGCTTTTGGGAAGGTATGAGGGCTTTTGCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LQGELGYEQSPA*LLGRYEGFCCE Trigger: TTCGCAGCAAAAGCCCTCATACCTTCCCAAAAGGCACGCAGGTGATTGCTCGTAACCAAGTTCGCCTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 72 bp | TCCCGGTGCAGAGAAATTCTGTCACTTGCAAAGGCGTaGAAGCAGTGCTTCGTTTCCCCTCGCTCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRCREILSLAKA*KQCFVSPRSFS Trigger: GGAGAAAGAGCGAGGGGAAACGAAGCACTGCTTCAACGCCTTTGCAAGTGACAGAATTTCTCTGCACCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 72 bp | CCTTCCGAATCTCCCATATCTGTTCTCCAGGGGCGATaGTCCTGTGACCTTTATAGACACATGCCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSESPISVLQGR*SCDLYRHMPSA Trigger: AGCTGAAGGCATGTGTCTATAAAGGTCACAGGACCATCGCCCCTGGAGAACAGATATGGGAGATTCGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 90 bp | CCTCTGCAAGGCGAACTTGGTTACGAGCAATCACCTGCGTGCCTTTaGGGAAGGTATGAGGGCTTTTGCTGCGAAAAACATGTCCAACAA | + |
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Preference number: 6 (lower is better) Translates to: PLQGELGYEQSPACL*GRYEGFCCEKHVQQ Trigger: TTGTTGGACATGTTTTTCGCAGCAAAAGCCCTCATACCTTCCCAAAAGGCACGCAGGTGATTGCTCGTAACCAAGTTCGCCTTGCAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 72 bp | AGAGAAATTCTGTCACTTGCAAAGGCGTTGAAGCAGTaGTTCGTTTCCCCTCGCTCTTTCTCCTTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: REILSLAKALKQ*FVSPRSFSFCS Trigger: GGAGCAGAAGGAGAAAGAGCGAGGGGAAACGAAGCACTGCTTCAACGCCTTTGCAAGTGACAGAATTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 72 bp | GGCGAACTTGGTTACGAGCAATCACCTGCGTGCCTTTaGGGAAGGTATGAGGGCTTTTGCTGCGAAAAACAT | + |
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Preference number: 6 (lower is better) Translates to: GELGYEQSPACL*GRYEGFCCEKH Trigger: ATGTTTTTCGCAGCAAAAGCCCTCATACCTTCCCAAAAGGCACGCAGGTGATTGCTCGTAACCAAGTTCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 72 bp | CCAAAGGAAAGGCTCCAGTCAAAATTTCCACGGTTATaGTTGCTTCCGTACGGAGAAGGCTTGTTGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: PKERLQSKFPRL*LLPYGEGLLNS Trigger: TGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTGGAAATTTTGACTGGAGCCTTTCCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 72 bp | CCACGGTTATGGTTGCTTCCGTACGGAGAAGGCTTGTaGAATTCAAATGTGTTTAGATCTATGGATGCGATG | + |
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Preference number: 6 (lower is better) Translates to: PRLWLLPYGEGL*NSNVFRSMDAM Trigger: CATCGCATCCATAGATCTAAACACATTTGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 72 bp | CACGGTTATGGTTGCTTCCGTACGGAGAAGGCTTGTTaGATTCAAATGTGTTTAGATCTATGGATGCGATGT | + |
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Preference number: 6 (lower is better) Translates to: HGYGCFRTEKAC*IQMCLDLWMRC Trigger: ACATCGCATCCATAGATCTAAACACATTTGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 90 bp | TCAAAATTTCCACGGTTATGGTTGCTTCCGTACGGAGAAGGCTTGTaGAATTCAAATGTGTTTAGATCTATGGATGCGATGTCTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: SKFPRLWLLPYGEGL*NSNVFRSMDAMSGL Trigger: GAGTCCAGACATCGCATCCATAGATCTAAACACATTTGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTGGAAATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 90 bp | CAGTCAAAATTTCCACGGTTATGGTTGCTTCCGTACGGAGAAGGCTaGTTGAATTCAAATGTGTTTAGATCTATGGATGCGATGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSKFPRLWLLPYGEG*LNSNVFRSMDAMSG Trigger: TCCAGACATCGCATCCATAGATCTAAACACATTTGAATTCAACAAGCCTTCTCCGTACGGAAGCAACCATAACCGTGGAAATTTTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS TCA 72 bp | CCCTGGTTATTCTCACCAACATCCAGACATAAAGGTTaGCCCACACTCTTAATATATCCAGATATAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: PWLFSPTSRHKG*PTLLIYPDITG Trigger: TCCTGTTATATCTGGATATATTAAGAGTGTGGGTCAACCTTTATGTCTGGATGTTGGTGAGAATAACCAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CAA 72 bp | GCGGACGTCGATATTCTCCTTAATGGGCGCTCCTATTaGCATCTTTGGCATTGCATCTTTAATATTATTTAC | + |
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Preference number: 6 (lower is better) Translates to: ADVDILLNGRSY*HLWHCIFNIIY Trigger: GTAAATAATATTAAAGATGCAATGCCAAAGATGCAAATAGGAGCGCCCATTAAGGAGAATATCGACGTCCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS GCA 72 bp | CGGACGTCGATATTCTCCTTAATGGGCGCTCCTATTTaGATCTTTGGCATTGCATCTTTAATATTATTTACA | + |
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Preference number: 6 (lower is better) Translates to: RTSIFSLMGAPI*IFGIASLILFT Trigger: TGTAAATAATATTAAAGATGCAATGCCAAAGATGCAAATAGGAGCGCCCATTAAGGAGAATATCGACGTCCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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| CDS CCA 72 bp | ACTCTTAATATATCCAGATATAACAGGATTAAGGTCTaGCACATACGCTTCCGGGTAAATAGTGTTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: TLNISRYNRIKV*HIRFRVNSVQV Trigger: TACCTGAACACTATTTACCCGGAAGCGTATGTGCCAGACCTTAATCCTGTTATATCTGGATATATTAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028378.4 |
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