Pregenerated sensors for GALNT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089704Ensembl transcript IDs: ENSMUST00000034458.9
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTACTGGAGGAGCAGCGTGGGCCGGCTGGTGAGGCCCCAGAGATaGACCTTTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGAT | + |
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Preference number: 1 (lower is better) Translates to: PYWRSSVGRLVRPQR*TFALGCAALQGSQD Trigger: ATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAAAGGTGCATCTCTGGGGCCTCACCAGCCGGCCCACGCTGCTCCTCCAGTAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 90 bp | CCTTCTGGAGCAGGCGGGAGGCACAGCACTCACCTACAGGCCCTCTaGCCACCTGGAACTCTGATTCCCGAGATCTCTGGGATACCCGAG | + |
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Preference number: 1 (lower is better) Translates to: PSGAGGRHSTHLQAL*PPGTLIPEISGIPE Trigger: CTCGGGTATCCCAGAGATCTCGGGAATCAGAGTTCCAGGTGGTCAGAGGGCCTGTAGGTGAGTGCTGTGCCTCCCGCCTGCTCCAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 90 bp | TGGCGAGCTCTCACTGTGGGGGCGCCTGCCCCTGCTTCCTCTGTCTaGGATATAAACATGATTGCTGCTTGCCCACTTGTTCCGGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: WRALTVGAPAPASSV*DINMIAACPLVPAS Trigger: ACTGGCCGGAACAAGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTGAGAGCTCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 90 bp | GTCAATGGAAGAGGGGACGTGGCTGGGAGGCCAGCTGAGCCCGGGTaGAGGGACAGACAAGGAAAGGCCAGCTTTGTGGAAATCATTTTT | + |
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Preference number: 1 (lower is better) Translates to: VNGRGDVAGRPAEPG*RDRQGKASFVEIIF Trigger: AAAAATGATTTCCACAAAGCTGGCCTTTCCTTGTCTGTCCCTGCACCCGGGCTCAGCTGGCCTCCCAGCCACGTCCCCTCTTCCATTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 90 bp | CACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCTTCTGTGCTCTaGCGGCAGCTTAGTACCAAAGACCCAACATACAGGGTCTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: HVGSTHRLKSCSSVL*RQLSTKDPTYRVSN Trigger: GTTTGAGACCCTGTATGTTGGGTCTTTGGTACTAAGCTGCCGGCAGAGCACAGAAGAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 90 bp | CCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGTaGCAGCTGTCCAGTGTCCCTGGTCTGTCACAAGGCAGTAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: PTYRVSNHCEPRDSG*QLSSVPGLSQGSRV Trigger: GACCCTACTGCCTTGTGACAGACCAGGGACACTGGACAGCTGTCACCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 90 bp | ACAGAGTGGAGATTGGCGAGCTCTCACTGTGGGGGCGCCTGCCCCTaGTTCCTCTGTCTGAGATATAAACATGATTGCTGCTTGCCCACT | + |
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Preference number: 1 (lower is better) Translates to: TEWRLASSHCGGACP*FLCLRYKHDCCLPT Trigger: AGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTGAGAGCTCGCCAATCTCCACTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CCA 90 bp | AGTTCACGTTCAAATACAGCAAGTATGTCAATGGAAGAGGGGACGTaGCTGGGAGGCCAGCTGAGCCCGGGTGCAGGGACAGACAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSRSNTASMSMEEGT*LGGQLSPGAGTDKE Trigger: TTCCTTGTCTGTCCCTGCACCCGGGCTCAGCTGGCCTCCCAGCCACGTCCCCTCTTCCATTGACATACTTGCTGTATTTGAACGTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CCA 90 bp | CCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGGGTGGGGTaGGGTACACGTGTGGTTGGGACGCCCCATGTTGTCTCACATCTG | + |
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Preference number: 1 (lower is better) Translates to: PDNQMVQRLRGHRVG*GTRVVGTPHVVSHL Trigger: CAGATGTGAGACAACATGGGGCGTCCCAACCACACGTGTACCCCACCCCACCCTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 90 bp | ACTGAGGTATATAGTTTTGCGGAAAGTTTCAGAAACGTAATTACGTaGTCAACAAACTGGGCCGGTGTGCGGGTGGACGTTGGGCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: TEVYSFAESFRNVIT*STNWAGVRVDVGPR Trigger: CCGGGGCCCAACGTCCACCCGCACACCGGCCCAGTTTGTTGATCACGTAATTACGTTTCTGAAACTTTCCGCAAAACTATATACCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 90 bp | CTCTTCTGCACTGCTGTCTGCCCCGCTCATGCCTCGATGAAGACTTaGGACTTAAGACTGTCAGACCGTGATGGAACACTGAGGTATATA | + |
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Preference number: 1 (lower is better) Translates to: LFCTAVCPAHASMKT*DLRLSDRDGTLRYI Trigger: TATATACCTCAGTGTTCCATCACGGTCTGACAGTCTTAAGTCTCAAGTCTTCATCGAGGCATGAGCGGGGCAGACAGCAGTGCAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCGCCAGTGCTGGGGTGTaGGCAGGAAGCAGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTPGLRARGVHPQAEELLASAGV*AGSRKR Trigger: CCTCTTTCTGCTTCCTGCTCACACCCCAGCACTGGC...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTGGCTGGGAGGCCAGCTaGGCCCGGGTGCAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LLWAALRCRVHKMMSGKRGWEAS*ARVQGQ Trigger: CTGTCCCTGCACCCGGGCTCAGCTGGCCTCCCAGCC...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGGCGTGGGCCGGCTGGTaGGGCCCCAGAGATGCACCT | + |
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Preference number: 2 (lower is better) Translates to: AAIPSLKLNIDACGWGQWAWAGW*GPRDAP Trigger: AGGTGCATCTCTGGGGCCTCACCAGCCGGCCCACGC...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTTGTTCCGGCCAGTGCTaGGGTGTGAGCAGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLWAALRCRVHKMMSGKRCSGQC*GVSRKQ Trigger: CTGCTTCCTGCTCACACCCCAGCACTGGCCGGAACA...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTCCTCAGCCTCCTGAGTaGTGGGATTACAGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LLWAALRCRVHKMMSGKRPQPPE*WDYRHW Trigger: CCAGTGCCTGTAATCCCATCACTCAGGAGGCTGAGG...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTAGACAGGGCCTTGCCTaGCTCAGCCTCCTGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LLWAALRCRVHKMMSGKRRQGLA*LSLLSD Trigger: ATCACTCAGGAGGCTGAGGCAGGCAAGGCCCTGTCT...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGCACTGTGGGGGCGCCTaGCCCTGCTTCCTCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGHCGGA*PCFLCL Trigger: CAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTG...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGGGTCCACCCACAGGCTaGAGAGCTGCTCTTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VGTLVARQSDGTKVKRPQGPPTG*RAALLC Trigger: GCACAGAAGAGCAGCTCTTCAGCCTGTGGGTGGACC...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGCAGCAAGTATGTCAATaGAAGAGGGGACGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AAIPSLKLNIDACGWGQWQQVCQ*KRGRGW Trigger: CCAGCCACGTCCCCTCTTCCATTGACATACTTGCTG...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGCCTAGGGATAGTGGGTaGCAGCTGTCCAGTGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VGTLVARQSDGTKVKRPQPRDSG*QLSSVP Trigger: AGGGACACTGGACAGCTGTCACCCACTATCCCTAGG...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGTTTCCTCTTCTGCACTaGTGTCTGCCCCGCTCATGC | + |
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Preference number: 2 (lower is better) Translates to: VSSVGCLAGVERQRVSTWFPLLH*CLPRSC Trigger: GCATGAGCGGGGCAGACAGCAGTGCAGAAGAGGAAA...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGGGGGGCGCCTGCCCCTaGTTCCTCTGTCTGAGATAT | + |
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Preference number: 2 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGGGACP*FLCLRY Trigger: ATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCC...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATACCTTTGCTCTGGGCTaGGCTGCGTTGCAGGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNTFALG*AALQGS Trigger: TGAACCCTGCAACGCAGCGCAGCCCAGAGCAAAGGT...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CAA 90 bp | GATAGCCCAGATGACTACAAAGCAATACAAGCTCGGCGAGTCACTTaGGCACACTGTCATGTAAACATGGCTCACCGACGGGCCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: DSPDDYKAIQARRVT*AHCHVNMAHRRALP Trigger: GGGCAGGGCCCGTCGGTGAGCCATGTTTACATGACAGTGTGCCAAAGTGACTCGCCGAGCTTGTATTGCTTTGTAGTCATCTGGGCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTTGCTTGGCAGGGGCAGGGTTCACAAGATaGTGTCGGGGAAGCGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TCGHPVCYNVSSVGCLAGAGFTR*CRGSVG Trigger: CCCTACGCTTCCCCGACATCATCTTGTGAACCCTGC...CCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CAA 90 bp | TTAGACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTaGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LDMWAPCLLQCLFCW*LGRGRKTEGQHLAR Trigger: CCTGGCCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTAAGACTGTCAGACCGTaGTGGAACACTGAGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: LLWAALRCRVHKMMSGKRKTVRP*WNTEVY Trigger: ATATACCTCAGTGTTCCATCACGGTCTGACAGTCTT...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTTGCTTGGCAGGGCACCTACAGGCCCTCTaGCCACCTGGAACTCTGATT | + |
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Preference number: 2 (lower is better) Translates to: TCGHPVCYNVSSVGCLAGHLQAL*PPGTLI Trigger: AATCAGAGTTCCAGGTGGTCAGAGGGCCTGTAGGTG...CCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATAGAGCTGCTCTTCTGTaGTCTGCCGGCAGCTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNRAALL*SAGSLV Trigger: TACTAAGCTGCCGGCAGAGCACAGAAGAGCAGCTCT...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATATGGAAGAGGGGACGTaGCTGGGAGGCCAGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GVTVPRAYIGRWTLYELNMEEGT*LGGQLS Trigger: GCTCAGCTGGCCTCCCAGCCACGTCCCCTCTTCCAT...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGACACACACACGATTTTaGATAGGTAAAACAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AAIPSLKLNIDACGWGQWTHTRF*IGKTEW Trigger: CCACTCTGTTTTACCTATTCAAAATCGTGTGTGTGT...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGGCAGGCCTTGTGATCTaGACTCTACCCATAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: VGTLVARQSDGTKVKRPQAGLVI*TLPIIP Trigger: AGGAATTATGGGTAGAGTTCAGATCACAAGGCCTGC...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTTGCTTGGCAGGGCCTGCTTCCTCTGTCTaGGATATAAACATGATTGCT | + |
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Preference number: 2 (lower is better) Translates to: TCGHPVCYNVSSVGCLAGPASSV*DINMIA Trigger: AGCAATCATGTTTATATCTCAGACAGAGGAAGCAGG...CCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGGGAACGGACCATaGTTCTCTTTATCTCTATTT | + |
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Preference number: 2 (lower is better) Translates to: TCGHPVCYNVSSVGCLAGVGNGP*FSLSLF Trigger: AAATAGAGATAAAGAGAATCATGGTCCGTTCCCTAC...CCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATATAGGTAAAACAGAGTaGAGATTGGCGAGCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GVTVPRAYIGRWTLYELNIGKTE*RLASSH Trigger: GTGAGAGCTCGCCAATCTCCACTCTGTTTTACCTAT...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 72 bp | GATGCCCCTACTGGAGGAGCAGCGTGGGCCGGCTGGTaGGGCCCCAGAGATGCACCTTTGCTCTGGGCTGCG | + |
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Preference number: 3 (lower is better) Translates to: DAPTGGAAWAGW*GPRDAPLLWAA Trigger: CGCAGCCCAGAGCAAAGGTGCATCTCTGGGGCCTCACCAGCCGGCCCACGCTGCTCCTCCAGTAGGGGCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 72 bp | AGGAGCAGCGTGGGCCGGCTGGTGAGGCCCCAGAGATaGACCTTTGCTCTGGGCTGCGCTGCGTTGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RSSVGRLVRPQR*TFALGCAALQG Trigger: ACCCTGCAACGCAGCGCAGCCCAGAGCAAAGGTGCATCTCTGGGGCCTCACCAGCCGGCCCACGCTGCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 72 bp | ACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTaGAGAGCTGCTCTTCTGTGCTCTGCCGGCAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: TRATGTWGPPTG*RAALLCSAGSL Trigger: TAAGCTGCCGGCAGAGCACAGAAGAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 72 bp | AGAGGGGACGTGGCTGGGAGGCCAGCTGAGCCCGGGTaGAGGGACAGACAAGGAAAGGCCAGCTTTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: RGDVAGRPAEPG*RDRQGKASFVE Trigger: TTCCACAAAGCTGGCCTTTCCTTGTCTGTCCCTGCACCCGGGCTCAGCTGGCCTCCCAGCCACGTCCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 72 bp | GCAGGCGGGAGGCACAGCACTCACCTACAGGCCCTCTaGCCACCTGGAACTCTGATTCCCGAGATCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: AGGRHSTHLQAL*PPGTLIPEISG Trigger: CCCAGAGATCTCGGGAATCAGAGTTCCAGGTGGTCAGAGGGCCTGTAGGTGAGTGCTGTGCCTCCCGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CCA 72 bp | TGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTaGCCAGGCCTTCGCAGAGGGTCCATGGTCATGGCG | + |
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Preference number: 3 (lower is better) Translates to: CLAGVERQRVST*PGLRRGSMVMA Trigger: CGCCATGACCATGGACCCTCTGCGAAGGCCTGGCCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGCAGAGGGCGCCAGCCTaGGGAGGGACCCTCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGQRAPA*GGTLCP Trigger: AGGACAGAGGGTCCCTCCCAAGGCTGGCGCCCTCTG...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CCA 72 bp | GAGGCACAGCACTCACCTACAGGCCCTCTGACCACCTaGAACTCTGATTCCCGAGATCTCTGGGATACCCGA | + |
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Preference number: 3 (lower is better) Translates to: EAQHSPTGPLTT*NSDSRDLWDTR Trigger: TCGGGTATCCCAGAGATCTCGGGAATCAGAGTTCCAGGTGGTCAGAGGGCCTGTAGGTGAGTGCTGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CCA 72 bp | CAGATGGTACAAAGGTTAAGAGGCCACAGGGTGGGGTaGGGTACACGTGTGGTTGGGACGCCCCATGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: QMVQRLRGHRVG*GTRVVGTPHVV Trigger: GACAACATGGGGCGTCCCAACCACACGTGTACCCCACCCCACCCTGTGGCCTCTTAACCTTTGTACCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR TCA 72 bp | AGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGTaGCAGCTGTCCAGTGTCCCTGGTCTGTCACAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RVSNHCEPRDSG*QLSSVPGLSQG Trigger: GCCTTGTGACAGACCAGGGACACTGGACAGCTGTCACCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 72 bp | ATCTCTGGGATACCCGAGATGAGCACGTATGATGCCTaGAGCCCACCAGGTGTCACTTCCCCACATCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: ISGIPEMSTYDA*SPPGVTSPHPG Trigger: ACCTGGATGTGGGGAAGTGACACCTGGTGGGCTGCAGGCATCATACGTGCTCATCTCGGGTATCCCAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR GCA 72 bp | AGATTGGCGAGCTCTCACTGTGGGGGCGCCTGCCCCTaGTTCCTCTGTCTGAGATATAAACATGATTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RLASSHCGGACP*FLCLRYKHDCC Trigger: GCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTGAGAGCTCGCCAATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | GAGTGGAGATTGGCGAGCTCTCACTGTGGGGGCGCCTaGCCCTGCTTCCTCTGTCTGAGATATAAACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EWRLASSHCGGA*PCFLCLRYKHD Trigger: ATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTGAGAGCTCGCCAATCTCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | TCCACCCACAGGCTGAAGAGCTGCTCTTCTGTGCTCTaGCGGCAGCTTAGTACCAAAGACCCAACATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: STHRLKSCSSVL*RQLSTKDPTYR Trigger: CCTGTATGTTGGGTCTTTGGTACTAAGCTGCCGGCAGAGCACAGAAGAGCAGCTCTTCAGCCTGTGGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR TCA 72 bp | CTCACTGTGGGGGCGCCTGCCCCTGCTTCCTCTGTCTaGGATATAAACATGATTGCTGCTTGCCCACTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTVGAPAPASSV*DINMIAACPLV Trigger: AACAAGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCAGGCGCCCCCACAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR TCA 72 bp | CTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTaGACTCTACCCATAATTCCTGCAGTTGCCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGPQWECAGLVI*TLPIIPAVACG Trigger: TCCACAGGCAACTGCAGGAATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | CCCTGCTTCCTCTGTCTGAGATATAAACATGATTGCTaGTTGCCCACTTGTTCCGGCCAGTGCTGGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PCFLCLRYKHDC*LPTCSGQCWGV Trigger: CACACCCCAGCACTGGCCGGAACAAGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | TGCCCCTGCTTCCTCTGTCTGAGATATAAACATGATTaGTGCTTGCCCACTTGTTCCGGCCAGTGCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CPCFLCLRYKHD*CLPTCSGQCWG Trigger: ACCCCAGCACTGGCCGGAACAAGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCAGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR CCA 72 bp | CGTGTGGTTGGGACGCCCCATGTTGTCTCACATCTGTaGAGTCACTCTGATAGAAGCAGTGCAGGAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RVVGTPHVVSHL*SHSDRSSAGVS Trigger: TGACACTCCTGCACTGCTTCTATCAGAGTGACTCCACAGATGTGAGACAACATGGGGCGTCCCAACCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | CGCAGGCCTTGTGATCTGAACTCTACCCATAATTCCTaGAGTTGCCTGTGGATGTACCGGGGGTATTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RRPCDLNSTHNS*SCLWMYRGYYP Trigger: TGGGTAATACCCCCGGTACATCCACAGGCAACTGCAGGAATTATGGGTAGAGTTCAGATCACAAGGCCTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR CCA 72 bp | GTGTCCCTGGTCTGTCACAAGGCAGTAGGGTCCTGCTaGCTCACATTAGTTAGAAGCTGTGGGGTTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLVCHKAVGSC*LTLVRSCGVEF Trigger: AAACTCAACCCCACAGCTTCTAACTAATGTGAGCCAGCAGGACCCTACTGCCTTGTGACAGACCAGGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR CCA 72 bp | GATCTGAACTCTACCCATAATTCCTGCAGTTGCCTGTaGATGTACCGGGGGTATTACCCACACCAGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DLNSTHNSCSCL*MYRGYYPHQGY Trigger: GTAGCCCTGGTGTGGGTAATACCCCCGGTACATCCACAGGCAACTGCAGGAATTATGGGTAGAGTTCAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | TCCTTTCCTCTTCTGCACTGCTGTCTGCCCCGCTCATaGCTCGATGAAGACTTGAGACTTAAGACTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SFPLLHCCLPRS*LDEDLRLKTVR Trigger: TCTGACAGTCTTAAGTCTCAAGTCTTCATCGAGGCATGAGCGGGGCAGACAGCAGTGCAGAAGAGGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR GCA 72 bp | CCTTGTGATCTGAACTCTACCCATAATTCCTGCAGTTaGCTGTGGATGTACCGGGGGTATTACCCACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCDLNSTHNSCS*LWMYRGYYPHQ Trigger: CTGGTGTGGGTAATACCCCCGGTACATCCACAGGCAACTGCAGGAATTATGGGTAGAGTTCAGATCACAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCTGAGGTATATAGTTTaGCGGAAAGTTTCAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: VSSVGCLAGVERQRVSTWLRYIV*RKVSET Trigger: CGTTTCTGAAACTTTCCGCAAAACTATATACCTCAG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR TCA 72 bp | GCCACCATGCCTGGTTCACACACACACACACGATTTTaGATAGGTAAAACAGAGTGGAGATTGGCGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ATMPGSHTHTRF*IGKTEWRLASS Trigger: AGAGCTCGCCAATCTCCACTCTGTTTTACCTATTCAAAATCGTGTGTGTGTGTGTGAACCAGGCATGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR TCA 72 bp | TATAGTTTTGCGGAAAGTTTCAGAAACGTAATTACGTaGTCAACAAACTGGGCCGGTGTGCGGGTGGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSFAESFRNVIT*STNWAGVRVDV Trigger: AACGTCCACCCGCACACCGGCCCAGTTTGTTGATCACGTAATTACGTTTCTGAAACTTTCCGCAAAACTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCGGAAGGTCAGGACCTTaGCCTGGGCGGCGTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTPGLRARGVHPQAEELLGRSGP*PGRRRH Trigger: GTGCCGACGCCGCCCAGGCCAAGGTCCTGACCTTCC...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCGCCGGGTGTCGGGGATaGCTCTGTCCATGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPGLRARGVHPQAEELLAGCRG*LCPCAA Trigger: AGCTGCACATGGACAGAGGCATCCCCGACACCCGGC...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCCCAGGCACAGGTTGCTaGCCACGTGTCGCAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGLRARGVHPQAEELLPGTGC*PRVAVW Trigger: CCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGG...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTGTCAGGACCTTGGCCTaGGCGGCGTCGGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWAALRCRVHKMMSGKRVRTLA*AASAPR Trigger: CCGGGGTGCCGACGCCGCCCAGGCCAAGGTCCTGAC...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCTCGTTACACTCGCAGTaGCTGTCTAGGAAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGLRARGVHPQAEELLSLHSQ*LSRKVR Trigger: CCTGACCTTCCTAGACAGTCACTGCGAGTGTAACGA...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCTTGTCACTCTCCACCTaGTTGAACTTGTTGCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGLRARGVHPQAEELLLSLST*LNLLRA Trigger: CGCACGCAACAAGTTCAACCAGGTGGAGAGTGACAA...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATCGCGGCTGCACGGGATaGTCTCCAGGCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNRGCTG*SPGCHH Trigger: GTGGTGGCAGCCTGGAGATCATCCCGTGCAGCCGCG...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATTGCTTCCGGAACACGTaGCCCACGCGGCTGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNCFRNT*PTRLHG Trigger: CCCGTGCAGCCGCGTGGGCCACGTGTTCCGGAAGCA...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCTGCAGCCTGATGAGTaGCCCAGGCGAACGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWLQPDE*PRRTVH Trigger: GTGGACCGTTCGCCTGGGTCACTCATCAGGCTGCAG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCTGGCCACCGGACTTTaGCTGGAGGGAGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWLATGL*LEGGSP Trigger: TGGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGGCAACTGGGTTCCCCTaGCGGGATCGCCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWATGFP*RDRLCS Trigger: AGAGCAGAGGCGATCCCGGCAGGGGAACCCAGTTGC...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGCACTCTCCACCTGGTTaGACTTGTTGCGTGCGTACG | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWHSPPG*TCCVRT Trigger: CGTACGCACGCAACAAGTTCAACCAGGTGGAGAGTG...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGAGCCCAGCTTTTTCCTaGGCTCCAGCCTGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWSPAFS*APACSE Trigger: TTCAGAGCAGGCTGGAGCTCAGGAAAAAGCTGGGCT...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGGTTGAACTTGTTGCGTaGGTACGGGTCCTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWVELVA*VRVLPR Trigger: TCTGGGCAGGACCCGTACGCACGCAACAAGTTCAAC...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCTCCGCTCTTGGCAGTaGGGCTATCCAGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWLRSWQ*GYPGTG Trigger: ACCTGTGCCTGGATAGCCGCACTGCCAAGAGCGGAG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTCTCCTGGTTAAAGTCTaGCCACCGGACTTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWAALRCRVHKMMSGKRLLVKV*PPDFAW Trigger: CCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAG...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGCACCACGCTGGTGGCTaGCAGGTCCACTCGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGHHAGG*QVHSPL Trigger: CAGTGGCGAGTGGACCTGCCAGCCACCAGCGTGGTG...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTCCGAAAGCTATGTCCTaGTGGTCTGGAACCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLWAALRCRVHKMMSGKRPKAMS*WSGTLS Trigger: GCTGAGGGTTCCAGACCACCAGGACATAGCTTTCGG...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATGAACTTCCACTGTTGTaGCAGGGCCGGGCCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNELPLL*QGRATH Trigger: GTGTGTGGCCCGGCCCTGTCACAACAGTGGAAGTTC...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGGGTCTCCACACCCTGTaGTTTCTCATCTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWGLHTL*FLISSA Trigger: AGCAGAGGAGATGAGAAAGCACAGGGTGTGGAGACC...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATCCACTCGCCACTGCTTaGGCTGACACTGGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNPLATA*ADTGHA Trigger: GGCATGACCAGTGTCAGCGCAAGCAGTGGCGAGTGG...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGGAGTTGCCTTCGATCTaGTCCCACTTCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWELPSI*SHFCLL Trigger: CAGCAGACAGAAGTGGGAGCAGATCGAAGGCAACTC...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR CAA 72 bp | GGACTCCAGCAAACTCCTGCCTTGTCCTTGACAGCTTaGCACCTGTACCTGGGAGTGACAGTTCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQQTPALSLTA*HLYLGVTVPRA Trigger: GGCTCTGGGAACTGTCACTCCCAGGTACAGGTGCAAAGCTGTCAAGGACAAGGCAGGAGTTTGCTGGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCGTCCTCAGGGTCGTTaGTGTAGTCATCCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWRPQGR*CSHPPG Trigger: TCCTGGTGGATGACTACAGCAACGACCCTGAGGACG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGCAAAGACAGTGCCGCTaGCACCGGGGAACGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGQRQCR*HRGTCR Trigger: CCTACACGTTCCCCGGTGGCAGCGGCACTGTCTTTG...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGCCAACGTATGCCTCCTaGTTAAAGTCTGGCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWPTYAS*LKSGHR Trigger: CCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGG...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATAGGTGTCCAGGCAGTTaGTTCCCTGCTGTAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNRCPGS*FPAVRP Trigger: GGGCCTTACAGCAGGGAACCAACTGCCTGGACACCT...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGATCTCCTTGATGAGGTaGGGTGGACTCCTCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWISLMR*GGLLLR Trigger: CCTCAAGAGGAGTCCACCTCACCTCATCAAGGAGAT...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | ACATGTGGGCACCCTGTCTGTTACAATGTCTCTTCTGTTGGTTGCTTGGCAGGGTGTCCAGGTACCACTTaGAGGGCTTGCAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCGHPVCYNVSSVGCLAGCPGTT*RACSPA Trigger: AGCTGGGCTGCAAGCCCTTCAAGTGGTACCTGGACA...CCCTGCCAAGCAACCAACAGAAGAGACATTGTAACAGACAGGGTGCCCACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGTATCCAGGCACAGGTTaGTGCCCACGTGTCGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTLVARQSDGTKVKRPQYPGTG*CPRVAV Trigger: AACTGCGACACGTGGGCAGCAACCTGTGCCTGGATA...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTGGGCTGCGCTGCGTTGCAGGGTTCACAAGATGATGTCGGGGAAGCGTTCTCCTCTGCTGTGGTaGAGGTCTTTCTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLWAALRCRVHKMMSGKRSPLLW*RSFFLM Trigger: CATTAAGAAGAAAGACCTTCACCACAGCAGAGGAGA...ACGCTTCCCCGACATCATCTTGTGAACCCTGCAACGCAGCGCAGCCCAGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS-3UTR GCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATTCCGGGCAAAGACAGTaGCGCTGCCACCGGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: GVTVPRAYIGRWTLYELNSGQRQ*RCHRGT Trigger: CGTTCCCCGGTGGCAGCGGCACTGTCTTTGCCCGGA...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| 3UTR CAA 72 bp | TGCTTCCTCTGTCTGAGATATAAACATGATTGCTGCTaGCCCACTTGTTCCGGCCAGTGCTGGGGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLCLRYKHDCC*PTCSGQCWGVS Trigger: GCTCACACCCCAGCACTGGCCGGAACAAGTGGGCAAGCAGCAATCATGTTTATATCTCAGACAGAGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR TCA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGTCATGTAATCCCACTTaGACACCAAGTTCCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAIPSLKLNIDACGWGQWSCNPT*TPSSSQ Trigger: TTGACTGGAACTTGGTGTTCAAGTGGGATTACATGA...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR GCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGAGGCACAGGTCCATGTaGTTCACCGACTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTLVARQSDGTKVKRPQRHRSM*FTDFSF Trigger: AAAGGAGAAGTCGGTGAAGCACATGGACCTGTGCCT...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATCCACCGGACTTTGCCTaGAGGGAGGGTCTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: GVTVPRAYIGRWTLYELNPPDFA*REGLHT Trigger: GGTGTGGAGACCCTCCCTCCAGGCAAAGTCCGGTGG...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATGGATCGCCTCTGCTCTaGTGTCATGTAATCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNGSPLL*CHVIPL Trigger: AAGTGGGATTACATGACACCAGAGCAGAGGCGATCC...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR GCA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGTGTACCGCCAACGTATaGCTCCTGGTTAAAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGCTANV*LLVKVW Trigger: CCAGACTTTAACCAGGAGGCATACGTTGGCGGTACA...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR GCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATACATGTAGTAGGCGATaGCCAGGACCCAGAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVTVPRAYIGRWTLYELNTCSRR*PGPRAA Trigger: CGCTGCTCTGGGTCCTGGGCATCGCCTACTACATGT...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR GCA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGTGCAGAAGGCACCGCTaGGTAGTAGAAATGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGTLVARQSDGTKVKRPQCRRHR*VVEMFV Trigger: TACAAACATTTCTACTACGCAGCGGTGCCTTCTGCA...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CCA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGGAGGCGCCCACATACTaGAAATTATCCATGTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSVGCLAGVERQRVSTWEAPTY*KLSMLM Trigger: CATTAACATGGATAATTTCCAGTATGTGGGCGCCTC...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| 3UTR CAA 72 bp | GATGACTACAAAGCAATACAAGCTCGGCGAGTCACTTaGGCACACTGTCATGTAAACATGGCTCACCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: DDYKAIQARRVT*AHCHVNMAHRR Trigger: CCGTCGGTGAGCCATGTTTACATGACAGTGTGCCAAAGTGACTCGCCGAGCTTGTATTGCTTTGTAGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATGACCTGGCTTCATTGTaGAATGTGATCACCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVTVPRAYIGRWTLYELNDLASL*NVITTL Trigger: CAGCGTGGTGATCACATTCCACAATGAAGCCAGGTC...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR GCA 90 bp | GGAGTGACAGTTCCCAGAGCCTACATTGGAAGGTGGACATTGTATGAACTTAATCTTTCTCATCTCCTCTaGTGTGGTGAAGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTVPRAYIGRWTLYELNLSHLL*CGEGLS Trigger: AGAAAGACCTTCACCACAGCAGAGGAGATGAGAAAG...ATTAAGTTCATACAATGTCCACCTTCCAATGTAGGCTCTGGGAACTGTCACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS GCA 90 bp | AGACTTCAGCTGCCCGGCGTGTGTTCCGGGCAAAGACAGTGCCGCTaGCACCGGGGAACGTGTAGGGATGCTGCTTCCGGAACACGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQLPGVCSGQRQCR*HRGTCRDAASGTRG Trigger: GCCACGTGTTCCGGAAGCAGCATCCCTACACGTTCCCCGGTGGCAGCGGCACTGTCTTTGCCCGGAACACACGCCGGGCAGCTGAAGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | CCCACACCAGGGCTACGGGCACGTGGGGTCCACCCACAGGCTGAAGAGCTGCTCAAGGTGTCCAGGCAGTaGGTTCCCTGCTGTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPGLRARGVHPQAEELLKVSRQ*VPCCKA Trigger: GGCCTTACAGCAGGGAACCAACTGCCTGGACACCTT...GAGCAGCTCTTCAGCCTGTGGGTGGACCCCACGTGCCCGTAGCCCTGGTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | CACTCAGGCCTCCGCTCTTGGCAGTGCGGCTATCCAGGCACAGGTTaGTGCCCACGTGTCGCAGTTTGGAGTTGCCTTCGATCTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGLRSWQCGYPGTG*CPRVAVWSCLRSAP Trigger: GGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATAGCCGCACTGCCAAGAGCGGAGGCCTGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS TCA 90 bp | CTTCTGTCTGCTGTCGTTCTCCCGGCAGCCCTGCAGCCTGATGAGTaGCCCAGGCGAACGGTCCACCACAGTAAGGCACAGGTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSAVVLPAALQPDE*PRRTVHHSKAQVHV Trigger: CACATGGACCTGTGCCTTACTGTGGTGGACCGTTCGCCTGGGTCACTCATCAGGCTGCAGGGCTGCCGGGAGAACGACAGCAGACAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | TCGATCTGCTCCCACTTCTGTCTGCTGTCGTTCTCCCGGCAGCCCTaGAGCCTGATGAGTGACCCAGGCGAACGGTCCACCACAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SICSHFCLLSFSRQP*SLMSDPGERSTTVR Trigger: CCTTACTGTGGTGGACCGTTCGCCTGGGTCACTCATCAGGCTGCAGGGCTGCCGGGAGAACGACAGCAGACAGAAGTGGGAGCAGATCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | TCAGGCCTCCGCTCTTGGCAGTGCGGCTATCCAGGCACAGGTTGCTaGCCACGTGTCGCAGTTTGGAGTTGCCTTCGATCTGCTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SGLRSWQCGYPGTGC*PRVAVWSCLRSAPT Trigger: AGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATAGCCGCACTGCCAAGAGCGGAGGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 90 bp | GGGTCCTGCCCAGAGCGAACCATTGTACCGCCAACGTATGCCTCCTaGTTAAAGTCTGGCCACCGGACTTTGCCTGGAGGGAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSCPERTIVPPTYAS*LKSGHRTLPGGRVS Trigger: GGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATGGTTCGCTCTGGGCAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | TGCGTACGGGTCCTGCCCAGAGCGAACCATTGTACCGCCAACGTATaGCTCCTGGTTAAAGTCTGGCCACCGGACTTTGCCTGGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVRVLPRANHCTANV*LLVKVWPPDFAWRE Trigger: CTCCCTCCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATGGTTCGCTCTGGGCAGGACCCGTACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | GGCTATCCAGGCACAGGTTGCTGCCCACGTGTCGCAGTTTGGAGTTaGCTTCGATCTGCTCCCACTTCTGTCTGCTGTCGTTCTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYPGTGCCPRVAVWS*LRSAPTSVCCRSPG Trigger: GCCGGGAGAACGACAGCAGACAGAAGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | GTCTCTTCTGTTGGTTGCTTGGCAGGGGTAGAAAGACAGAGGGTCAGCACCTGGTCTGGCCACCGGACTTaGCCTGGAGGGAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSVGCLAGVERQRVSTWSGHRT*PGGRVS Trigger: GGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAGA...CCAGGTGCTGACCCTCTGTCTTTCTACCCCTGCCAAGCAACCAACAGAAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATAGGAAGGTCAGGACCTaGGCCTGGGCGGCGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNRKVRT*AWAASA Trigger: TGCCGACGCCGCCCAGGCCAAGGTCCTGACCTTCCT...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | ACTCCATCCGCGAAGTGTCCCAAGGTGTCCAGGCAGTTGGTTCCCTaGTGTAAGGCCCCGAAAGCTATGTCCTGGTGGTCTGGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSAKCPKVSRQLVP*CKAPKAMSWWSGTL Trigger: GAGGGTTCCAGACCACCAGGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGCGGATGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 90 bp | AGAGCGAACCATTGTACCGCCAACGTATGCCTCCTGGTTAAAGTCTaGCCACCGGACTTTGCCTGGAGGGAGGGTCTCCACACCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RANHCTANVCLLVKV*PPDFAWREGLHTLC Trigger: GCACAGGGTGTGGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATGGTTCGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGTTGTCCAGGTACCACTaGAAGGGCTTGCAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAIPSLKLNIDACGWGQWLSRYH*KGLQPS Trigger: GCTGGGCTGCAAGCCCTTCAAGTGGTACCTGGACAA...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 90 bp | TTCCAACAACTCCATCCGCGAAGTGTCCCAAGGTGTCCAGGCAGTTaGTTCCCTGCTGTAAGGCCCCGAAAGCTATGTCCTGGTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQLHPRSVPRCPGS*FPAVRPRKLCPGGL Trigger: CAGACCACCAGGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGCGGATGGAGTTGTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | GCTGCGATCCCCTCGCTGAAGTTAAACATTGACGCTTGTGGGTGGGGCCAGTGGTACCACTTGAAGGGCTaGCAGCCCAGCTTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAIPSLKLNIDACGWGQWYHLKG*QPSFFL Trigger: CAGGAAAAAGCTGGGCTGCAAGCCCTTCAAGTGGTA...CCACTGGCCCCACCCACAAGCGTCAATGTTTAACTTCAGCGAGGGGATCGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | AGTGACCCAGGCGAACGGTCCACCACAGTAAGGCACAGGTCCATGTaGTTCACCGACTTCTCCTTTGTCAAGGCCCATTCCTGGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDPGERSTTVRHRSM*FTDFSFVKAHSWFP Trigger: AGGAAACCAGGAATGGGCCTTGACAAAGGAGAAGTCGGTGAAGCACATGGACCTGTGCCTTACTGTGGTGGACCGTTCGCCTGGGTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | GTTGGCACCCTGGTGGCCAGACAATCAGATGGTACAAAGGTTAAGAGGCCACAGACCTGGTTGAACTTGTaGCGTGCGTACGGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGTLVARQSDGTKVKRPQTWLNL*RAYGSC Trigger: GCAGGACCCGTACGCACGCAACAAGTTCAACCAGGT...CTGTGGCCTCTTAACCTTTGTACCATCTGATTGTCTGGCCACCAGGGTGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGTCCTCAGTGGGAGTGCGCAGGCCTTGTGATCTGAACTCTACCCATAATTCCACCTGGTTGAACTaGTTGCGTGCGTACGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSSVGVRRPCDLNSTHNSTWLN*LRAYGS Trigger: GGACCCGTACGCACGCAACAAGTTCAACCAGGTGGA...ATTATGGGTAGAGTTCAGATCACAAGGCCTGCGCACTCCCACTGAGGACCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | GTCTGGCCACCGGACTTTGCCTGGAGGGAGGGTCTCCACACCCTGTaGTTTCTCATCTCCTCTGCTGTGGTGAAGGTCTTTCTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VWPPDFAWREGLHTL*FLISSAVVKVFLLN Trigger: ATTAAGAAGAAAGACCTTCACCACAGCAGAGGAGATGAGAAAGCACAGGGTGTGGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS-3UTR CAA 90 bp | ACCAAAGACCCAACATACAGGGTCTCAAACCACTGTGAGCCTAGGGATAGTGGGTCACTCTCCACCTGGTaGAACTTGTTGCGTGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TKDPTYRVSNHCEPRDSGSLSTW*NLLRAY Trigger: GTACGCACGCAACAAGTTCAACCAGGTGGAGAGTGA...CCCACTATCCCTAGGCTCACAGTGGTTTGAGACCCTGTATGTTGGGTCTTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 90 bp | CCTGAGCTCCAGCCTGCTCTGAATATTCCCATAGGGCACGTTTCGTaGAGAAGGCACCGCTGCGTAGTAGAAATGTTTGTACTCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PELQPALNIPIGHVS*RRHRCVVEMFVLIH Trigger: ATGGATGAGTACAAACATTTCTACTACGCAGCGGTGCCTTCTGCACGAAACGTGCCCTATGGGAATATTCAGAGCAGGCTGGAGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | CTGCCCGGCGTGTGTTCCGGGCAAAGACAGTGCCGCTaGCACCGGGGAACGTGTAGGGATGCTGCTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPGVCSGQRQCR*HRGTCRDAASG Trigger: TCCGGAAGCAGCATCCCTACACGTTCCCCGGTGGCAGCGGCACTGTCTTTGCCCGGAACACACGCCGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | CTTCAGCTGCCCGGCGTGTGTTCCGGGCAAAGACAGTaGCGCTGCCACCGGGGAACGTGTAGGGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQLPGVCSGQRQ*RCHRGTCRDAA Trigger: AGCAGCATCCCTACACGTTCCCCGGTGGCAGCGGCACTGTCTTTGCCCGGAACACACGCCGGGCAGCTGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS TCA 72 bp | GCTGTCGTTCTCCCGGCAGCCCTGCAGCCTGATGAGTaGCCCAGGCGAACGGTCCACCACAGTAAGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AVVLPAALQPDE*PRRTVHHSKAQ Trigger: CTGTGCCTTACTGTGGTGGACCGTTCGCCTGGGTCACTCATCAGGCTGCAGGGCTGCCGGGAGAACGACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | TCCCACTTCTGTCTGCTGTCGTTCTCCCGGCAGCCCTaGAGCCTGATGAGTGACCCAGGCGAACGGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SHFCLLSFSRQP*SLMSDPGERST Trigger: GGTGGACCGTTCGCCTGGGTCACTCATCAGGCTGCAGGGCTGCCGGGAGAACGACAGCAGACAGAAGTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | CACACACCTCCACACTCAGGCCTCCGCTCTTGGCAGTaGGGCTATCCAGGCACAGGTTGCTGCCCACGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HTPPHSGLRSWQ*GYPGTGCCPRV Trigger: GACACGTGGGCAGCAACCTGTGCCTGGATAGCCGCACTGCCAAGAGCGGAGGCCTGAGTGTGGAGGTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CAA 90 bp | CGGCTATCCAGGCACAGGTTGCTGCCCACGTGTCGCAGTTTGGAGTaGCCTTCGATCTGCTCCCACTTCTGTCTGCTGTCGTTCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSRHRLLPTCRSLE*PSICSHFCLLSFSR Trigger: CCGGGAGAACGACAGCAGACAGAAGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | GTCCTGCCCAGAGCGAACCATTGTACCGCCAACGTATaGCTCCTGGTTAAAGTCTGGCCACCGGACTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLPRANHCTANV*LLVKVWPPDFA Trigger: GGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATGGTTCGCTCTGGGCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | TCCACCTGGTTGAACTTGTTGCGTGCGTACGGGTCCTaGCCAGAGCGAACCATTGTACCGCCAACGTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: STWLNLLRAYGS*PERTIVPPTYA Trigger: GGCATACGTTGGCGGTACAATGGTTCGCTCTGGGCAGGACCCGTACGCACGCAACAAGTTCAACCAGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | GCGAAGTGTCCCAAGGTGTCCAGGCAGTTGGTTCCCTaGTGTAAGGCCCCGAAAGCTATGTCCTGGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AKCPKVSRQLVP*CKAPKAMSWWS Trigger: AGACCACCAGGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS GCA 72 bp | GGCACAGGTTGCTGCCCACGTGTCGCAGTTTGGAGTTaGCTTCGATCTGCTCCCACTTCTGTCTGCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GTGCCPRVAVWS*LRSAPTSVCCR Trigger: ACGACAGCAGACAGAAGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS CCA 72 bp | CATTGTACCGCCAACGTATGCCTCCTGGTTAAAGTCTaGCCACCGGACTTTGCCTGGAGGGAGGGTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HCTANVCLLVKV*PPDFAWREGLH Trigger: GTGGAGACCCTCCCTCCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
||
| CDS CCA 72 bp | CCAGAGCGAACCATTGTACCGCCAACGTATGCCTCCTaGTTAAAGTCTGGCCACCGGACTTTGCCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PERTIVPPTYAS*LKSGHRTLPGG Trigger: CCCTCCAGGCAAAGTCCGGTGGCCAGACTTTAACCAGGAGGCATACGTTGGCGGTACAATGGTTCGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 72 bp | CTCCATCCGCGAAGTGTCCCAAGGTGTCCAGGCAGTTaGTTCCCTGCTGTAAGGCCCCGAAAGCTATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHPRSVPRCPGS*FPAVRPRKLCP Trigger: AGGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGCGGATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CAA 72 bp | ACTCCATCCGCGAAGTGTCCCAAGGTGTCCAGGCAGTaGGTTCCCTGCTGTAAGGCCCCGAAAGCTATGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPSAKCPKVSRQ*VPCCKAPKAMS Trigger: GGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGCGGATGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS TCA 72 bp | CCCGAGAGCGCATTAGACCTTCTCTCCGGTCATTTCTaGGGACCCGCACCTTCTCGATTTTCCCCAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PESALDLLSGHF*GPAPSRFSPRG Trigger: CCCTCTTGGGGAAAATCGAGAAGGTGCGGGTCCTCAGAAATGACCGGAGAGAAGGTCTAATGCGCTCTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | CCGGACTTTGCCTGGAGGGAGGGTCTCCACACCCTGTaGTTTCTCATCTCCTCTGCTGTGGTGAAGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PDFAWREGLHTL*FLISSAVVKVF Trigger: AAAGACCTTCACCACAGCAGAGGAGATGAGAAAGCACAGGGTGTGGAGACCCTCCCTCCAGGCAAAGTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | GGCGAACGGTCCACCACAGTAAGGCACAGGTCCATGTaGTTCACCGACTTCTCCTTTGTCAAGGCCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: GERSTTVRHRSM*FTDFSFVKAHS Trigger: GGAATGGGCCTTGACAAAGGAGAAGTCGGTGAAGCACATGGACCTGTGCCTTACTGTGGTGGACCGTTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 72 bp | GGCAACTGGGTTCCCCTGCCGGGATCGCCTCTGCTCTaGTGTCATGTAATCCCACTTGAACACCAAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GNWVPLPGSPLL*CHVIPLEHQVP Trigger: TGGAACTTGGTGTTCAAGTGGGATTACATGACACCAGAGCAGAGGCGATCCCGGCAGGGGAACCCAGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 72 bp | TATCCAGGCACAGGTTGCTGCCCACGTGTCGCAGTTTaGAGTTGCCTTCGATCTGCTCCCACTTCTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: YPGTGCCPRVAV*SCLRSAPTSVC Trigger: GCAGACAGAAGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CAA 72 bp | CTATCCAGGCACAGGTTGCTGCCCACGTGTCGCAGTTaGGAGTTGCCTTCGATCTGCTCCCACTTCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSRHRLLPTCRS*ELPSICSHFCL Trigger: CAGACAGAAGTGGGAGCAGATCGAAGGCAACTCCAAACTGCGACACGTGGGCAGCAACCTGTGCCTGGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CAA 90 bp | ATTCCAACAACTCCATCCGCGAAGTGTCCCAAGGTGTCCAGGCAGTaGGTTCCCTGCTGTAAGGCCCCGAAAGCTATGTCCTGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IPTTPSAKCPKVSRQ*VPCCKAPKAMSWWS Trigger: AGACCACCAGGACATAGCTTTCGGGGCCTTACAGCAGGGAACCAACTGCCTGGACACCTTGGGACACTTCGCGGATGGAGTTGTTGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | ATTCCCATAGGGCACGTTTCGTGCAGAAGGCACCGCTaGGTAGTAGAAATGTTTGTACTCATCCATCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: IPIGHVSCRRHR*VVEMFVLIHPD Trigger: GTCTGGATGGATGAGTACAAACATTTCTACTACGCAGCGGTGCCTTCTGCACGAAACGTGCCCTATGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS GCA 72 bp | CAGCCTGCTCTGAATATTCCCATAGGGCACGTTTCGTaGAGAAGGCACCGCTGCGTAGTAGAAATGTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: QPALNIPIGHVS*RRHRCVVEMFV Trigger: TACAAACATTTCTACTACGCAGCGGTGCCTTCTGCACGAAACGTGCCCTATGGGAATATTCAGAGCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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| CDS CCA 72 bp | AAACCACCCTTGAGGTCAGCAGAGGCGCCCACATACTaGAAATTATCCATGTTAATGACATCGATAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: KPPLRSAEAPTY*KLSMLMTSIMG Trigger: CCCCATTATCGATGTCATTAACATGGATAATTTCCAGTATGTGGGCGCCTCTGCTGACCTCAAGGGTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034458.9 |
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