Pregenerated sensors for GALNT17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034040Ensembl transcript IDs: ENSMUST00000086023.13, ENSMUST00000160609.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGGAGGAGCCCTGAGAGGTCCACAGAGCATCCTCTGGGTGCCTaGTGTCTCTCCACCATGTGGCTGCTTCTGAGGATGGCCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LWRSPERSTEHPLGA*CLSTMWLLLRMARP Trigger: GGGCCTGGCCATCCTCAGAAGCAGCCACATGGTGGAGAGACAGCAGGCACCCAGAGGATGCTCTGTGGACCTCTCAGGGCTCCTCCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | GAGGGGGACGTAACATCTTTATCCAGGGCTGCTCTGGAGGAGCCCTaGGAGGTCCACAGAGCATCCTCTGGGTGCCTGCTGTCTCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: EGDVTSLSRAALEEP*EVHRASSGCLLSLH Trigger: GTGGAGAGACAGCAGGCACCCAGAGGATGCTCTGTGGACCTCTCAGGGCTCCTCCAGAGCAGCCCTGGATAAAGATGTTACGTCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | CGCTTCTGTCCCCCATCAGCCAGCAAAGCATGGGGTGAAATGAGCTaGGCAGTAAGCGTCACAGAGGGCCCTGTGCCCATCACTAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RFCPPSASKAWGEMS*AVSVTEGPVPITRL Trigger: CAGCCTAGTGATGGGCACAGGGCCCTCTGTGACGCTTACTGCTCAGCTCATTTCACCCCATGCTTTGCTGGCTGATGGGGGACAGAAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | AGCAAGCCAGCTGGACAGACATCCTGCCCCACTGCCTTGTGGTCCTaGAGTCCCAGGACATTGGCCATTGTACCCCATGTGGATGCAACC | + |
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Preference number: 1 (lower is better) Translates to: SKPAGQTSCPTALWS*SPRTLAIVPHVDAT Trigger: GGTTGCATCCACATGGGGTACAATGGCCAATGTCCTGGGACTTCAGGACCACAAGGCAGTGGGGCAGGATGTCTGTCCAGCTGGCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | CAAACCAATGTCCGCTCATGGTTAGAGAAGGCATACAGTCCATCATaGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCTGCCTGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: QTNVRSWLEKAYSPS*QERHGCRGVSCLGT Trigger: TGTGCCCAGGCAGCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTCTAACCATGAGCGGACATTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | TCTTGGAGGTCCAGGGTGAGTTACACAAGTAGTTGCAGCAAAGGATaGGAGAAAAGAGTGGAGAGGGAGGGAGGGAGGGAGAGAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SWRSRVSYTSSCSKG*EKRVEREGGRERGR Trigger: CCTCCCTCTCTCCCTCCCTCCCTCCCTCTCCACTCTTTTCTCTCATCCTTTGCTGCAACTACTTGTGTAACTCACCCTGGACCTCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | TGGGAGTCTTACTGCTTCCTTCTCCAAGAGGGAGGAGCTAGGATGTaGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: WESYCFLLQEGGARM*LKPSLSSMSWRSRV Trigger: CACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATCCTAGCTCCTCCCTCTTGGAGAAGGAAGCAGTAAGACTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | CTCATGGTTAGAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATaGCTGCAGGGGTGTGAGCTGCCTGGGCACATTGCATCCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: LMVREGIQSIMAGKA*LQGCELPGHIASIV Trigger: GACTATGGATGCAATGTGCCCAGGCAGCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTCTAACCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | GAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACTATGCAAGATaGCACCCCCTGGGACATTCAAGCACTCCCAAGGACTTAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: ELYAWSWLLCHYYAR*HPLGHSSTPKDLGP Trigger: TGGTCCTAAGTCCTTGGGAGTGCTTGAATGTCCCAGGGGGTGTCATCTTGCATAGTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | TGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTaGATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTG | + |
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Preference number: 1 (lower is better) Translates to: WMQPQEVLCRSPNVA*MFSGLPILSSPSPL Trigger: CAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | AAGAACAATCCAGAGGAGTCCAGAACTCTTGTCTCAAAGTCACCTTaGAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACAGGC | + |
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Preference number: 1 (lower is better) Translates to: KNNPEESRTLVSKSP*REGLSGCCLGIQTG Trigger: GCCTGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGAGACAAGAGTTCTGGACTCCTCTGGATTGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | CATTGGCCATTGTACCCCATGTGGATGCAACCTCAGGAGGTTTTATaGAGGAGCCCAAATGTAGCTTGCATGTTCTCTGGCCTGCCAATT | + |
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Preference number: 1 (lower is better) Translates to: HWPLYPMWMQPQEVL*RSPNVACMFSGLPI Trigger: AATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGGTACAATGGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | TCCTATCTCTCTTTCCCTGTGTGTGTGTTCGGACATCAACTAAGATaGTGCTTCCTGGCTTCTTCCTACAAAAGAGACATAGGGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: SYLSFPVCVFGHQLR*CFLASSYKRDIGPT Trigger: GGTGGGCCCTATGTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACACACACACAGGGAAAGAGAGATAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | GTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATaGACCCAAAATTCTCAGACTCTGGTACTTAAGGTGACAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: VLWPANSLLPISIAP*TQNSQTLVLKVTTE Trigger: TTCAGTTGTCACCTTAAGTACCAGAGTCTGAGAATTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | TATCTCTCTTTCCCTGTGTGTGTGTTCGGACATCAACTAAGATGGTaGTTCCTGGCTTCTTCCTACAAAAGAGACATAGGGCCCACCATG | + |
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Preference number: 1 (lower is better) Translates to: YLSFPVCVFGHQLRW*FLASSYKRDIGPTM Trigger: CATGGTGGGCCCTATGTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACACACACACAGGGAAAGAGAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | GCCACACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTGCATaGAGACACATCCATATATTAACTCTGATTTATAAGTGCACCCTA | + |
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Preference number: 1 (lower is better) Translates to: ATHITQAGTLLLSRA*RHIHILTLIYKCTL Trigger: TAGGGTGCACTTATAAATCAGAGTTAATATATGGATGTGTCTGCATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR TCA 90 bp | CCATTGCTCCATGGACCCAAAATTCTCAGACTCTGGTACTTAAGGTaGCAACTGAAGATAAATGTTTTCTATGGGTATGCTGTCGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: PLLHGPKILRLWYLR*QLKINVFYGYAVVA Trigger: GGCTACGACAGCATACCCATAGAAAACATTTATCTTCAGTTGTCACCTTAAGTACCAGAGTCTGAGAATTTTGGGTCCATGGAGCAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CCA 90 bp | ACTGTCTTAATGAAGTTAATTGATTTGGGAAGACCCAACCCACTGTaGGCAGTACCATTCCCTAGGCAGGAGGTCCTCAACTATATAATA | + |
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Preference number: 1 (lower is better) Translates to: TVLMKLIDLGRPNPL*AVPFPRQEVLNYII Trigger: TATTATATAGTTGAGGACCTCCTGCCTAGGGAATGGTACTGCCCACAGTGGGTTGGGTCTTCCCAAATCAATTAACTTCATTAAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | GAGCAAAATCAAGCACACGTGCATTCATTTCTCTCTGACTTTGACTaGAGACATAAATGTAACCAGCTGCTTCAAATTCCTGCTTTAACT | + |
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Preference number: 1 (lower is better) Translates to: EQNQAHVHSFLSDFD*RHKCNQLLQIPALT Trigger: AGTTAAAGCAGGAATTTGAAGCAGCTGGTTACATTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR GCA 90 bp | CTATATAATAGCAGAGAAGCTGAGTTGAGCAAAATCAAGCACACGTaGATTCATTTCTCTCTGACTTTGACTGCAGACATAAATGTAACC | + |
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Preference number: 1 (lower is better) Translates to: LYNSREAELSKIKHT*IHFSLTLTADINVT Trigger: GGTTACATTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTTGCTCAACTCAGCTTCTCTGCTATTATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR TCA 90 bp | TACACCCAGCCACACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTGCATGCTCTGGAGGAGCCCTaGGAGGTCCACAGAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: YTQPHTSLRQAHSCFPVHALEEP*EVHRAS Trigger: GGATGCTCTGTGGACCTCTCAGGGCTCCTCCAGAGC...ATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACAGGCCAGGCCCTGCCCTaGGTCTGGGCTCCATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SKSPCREGLSGCCLGIQTGQALP*VWAPCA Trigger: GGCACATGGAGCCCAGACCCAGGGCAGGGCCTGGCC...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCACCCTTGCTGCTCCATaGAACCAGGGCACCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: EKAYSPSWQERHGCRGVSTLAAP*NQGTLS Trigger: GGACAAGGTGCCCTGGTTTCATGGAGCAGCAAGGGT...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCGAGTGGCTGCTGCCTTaGCATACAAACAGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TRPNTPHHIASQLDRHPAEWLLP*HTNRPL Trigger: CAGAGGCCTGTTTGTATGCCAAGGCAGCAGCCACTC...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGCAGAGAAGGTCTGAGTaGCTGCTGCCTTGGCATACA | + |
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Preference number: 2 (lower is better) Translates to: GPVPITRLTLQPLCPAWKQRRSE*LLPWHT Trigger: TGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTG...CTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCGTCTCAAAGTCACCTTaGAGAGAAGGTCTGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EKAYSPSWQERHGCRGVSVSKSP*REGLSG Trigger: GCCACTCAGACCTTCTCTGCAAGGTGACTTTGAGAC...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | TACACCCAGCCACACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTGCATTGCATGGAAGACCCTTaGTGCTCCATGAAACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YTQPHTSLRQAHSCFPVHCMEDP*CSMKPG Trigger: CCCTGGTTTCATGGAGCAGCAAGGGTCTTCCATGCA...ATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCCCTCCCCATCTCCATTaGTCCATGGACCCAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: EKAYSPSWQERHGCRGVSPPHLH*SMDPKF Trigger: GAATTTTGGGTCCATGGAGCAATGGAGATGGGGAGG...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GTAAGCGTCACAGAGGGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATTGTCCTCCATGTCTTaGAGGTCCAGGGTGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: VSVTEGPVPITRLTLQPLLSSMS*RSRVSY Trigger: GTAACTCACCCTGGACCTCCAAGACATGGAGGACAA...TAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCCCTCTGTGACGCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GTAAGCGTCACAGAGGGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTACCATATTTAGGGCTTTaGGTGACTGGGACAGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VSVTEGPVPITRLTLQPLPYLGL*VTGTGN Trigger: GTTCCCTGTCCCAGTCACCCAAAGCCCTAAATATGG...TAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCCCTCTGTGACGCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCCAAGAAGCAGAGAGTTaGTGGGACGTCTTGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: EKAYSPSWQERHGCRGVSQEAES*WDVLYH Trigger: ATGGTACAAGACGTCCCACCAACTCTCTGCTTCTTG...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAAACTTGGAGGTCCAGGGTaGGTTACACAAGTAGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLACQFSPPHLHCSMDPKLGGPG*VTQVVA Trigger: TGCAACTACTTGTGTAACTCACCCTGGACCTCCAAG...TTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCCAGATGAGAATAAGGGGAAGATCTTCAAAGTACACAGGCAGAATGCCTCCACAGAGCATCCTCTaGGTGCCTGCTGTCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GPQMRIRGRSSKYTGRMPPQSIL*VPAVSP Trigger: TGGAGAGACAGCAGGCACCCAGAGGATGCTCTGTGG...AGGCATTCTGCCTGTGTACTTTGAAGATCTTCCCCTTATTCTCATCTGGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACACTGCTGATGCTGGGGTaGGAGATGATACCGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SKSPCREGLSGCCLGIQTLLMLG*EMIPWR Trigger: TCTCCACGGTATCATCTCCCACCCCAGCATCAGCAG...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACGCTCTGGGCAGGAGATaGCCAAGGACAGTAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RPQAFFELYAWSWLLCHYALGRR*PRTVVD Trigger: ATCCACTACTGTCCTTGGCCATCTCCTGCCCAGAGC...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CAA 90 bp | GTGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTaGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATT | + |
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Preference number: 2 (lower is better) Translates to: VDATSGGFMQEPKCS*HVLWPANSLLPISI Trigger: AATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | AATGTAGCTTGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGTCAGCCCTTATGTCCTaGATGGAAGACCCTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: NVACMFSGLPILSSPSPLSALMS*MEDPCC Trigger: GCAGCAAGGGTCTTCCATGCAGGACATAAGGGCTGA...CAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCCCCACAAGAGACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTCCTCAGGAGGTTTTATaGAGGAGCCCAAATGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: ISPTRDKTQHSPPHSKPAPQEVL*RSPNVA Trigger: AGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGG...AGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGTCTCTTGTGGGGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCCAGATGAGAATAAGGGGAAGATCTTCAAAGTACACAGGCAGAATGCCTTGTCTCTCCACCATGTaGCTGCTTCTGAGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: GPQMRIRGRSSKYTGRMPCLSTM*LLLRMA Trigger: GGCCATCCTCAGAAGCAGCCACATGGTGGAGAGACA...AGGCATTCTGCCTGTGTACTTTGAAGATCTTCCCCTTATTCTCATCTGGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GATGTGGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTATGGGAGATGATACCGTaGAGAGATATGAGCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: DVAKALIVLHVLEVQGELWEMIP*RDMSSL Trigger: GAGGCTGCTCATATCTCTCCACGGTATCATCTCCCA...TAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CAA 90 bp | CAAGAACAATCCAGAGGAGTCCAGAACTCTTGTCTCAAAGTCACCTaGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: QEQSRGVQNSCLKVT*QRRSEWLLPWHTNR Trigger: CCTGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGAGACAAGAGTTCTGGACTCCTCTGGATTGTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CAA 90 bp | TCCATGAACACCCGGAGCGACTATGTGTTCTGCAGACAGTTGGAGTaGCTGAAGGTAATAGAAGGAGGAGATCAGGTATCCAGGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SMNTRSDYVFCRQLE*LKVIEGGDQVSRLG Trigger: ACCTAGCCTGGATACCTGATCTCCTCCTTCTATTACCTTCAGCAACTCCAACTGTCTGCAGAACACATAGTCGCTCCGGGTGTTCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR CAA 90 bp | AGGTTCTCCATGAACACCCGGAGCGACTATGTGTTCTGCAGACAGTaGGAGTTGCTGAAGGTAATAGAAGGAGGAGATCAGGTATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RFSMNTRSDYVFCRQ*ELLKVIEGGDQVSR Trigger: CCTGGATACCTGATCTCCTCCTTCTATTACCTTCAGCAACTCCAACTGTCTGCAGAACACATAGTCGCTCCGGGTGTTCATGGAGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR TCA 90 bp | GACCAAAGGTTCCCTCAGGGTTCTGTTATCAAATTTACTTCTTGCTGTAAAAGACCATGTGGCTGCTTCTaGGGATGGCCAGGCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: DQRFPQGSVIKFTSCCKRPCGCF*GWPGPA Trigger: GGCAGGGCCTGGCCATCCTCAGAAGCAGCCACATGG...TCTTTTACAGCAAGAAGTAAATTTGATAACAGAACCCTGAGGGAACCTTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCCTTTGCCCCAATCTGTaGGAATTGGTTTGTATGTTT | + |
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Preference number: 2 (lower is better) Translates to: TRPNTPHHIASQLDRHPALCPNL*ELVCMF Trigger: AAACATACAAACCAATTCTCACAGATTGGGGCAAAG...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR GCA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCTTGCTTTCCCGTGCATaGAGACACATCCATATATTA | + |
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Preference number: 2 (lower is better) Translates to: TRPNTPHHIASQLDRHPALLSRA*RHIHIL Trigger: TAATATATGGATGTGTCTGCATGCACGGGAAAGCAA...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACCACAAGGAGGGGAGATaGGGCAAGGAGATGATCACC | + |
|
Preference number: 2 (lower is better) Translates to: VFGHQLRWCFLASSYKRDHKEGR*GKEMIT Trigger: GGTGATCATCTCCTTGCCCCATCTCCCCTCCTTGTG...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAATAGGAATTGTCTATaGTGGGTTATACGGTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CSLACQFSPPHLHCSMDPNRNCL*WVIRWE Trigger: TTCCCACCGTATAACCCAGCATAGACAATTCCTATT...TGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 90 bp | GCAAACATACACCCAGCCACACACATCACTCAGGCAGGCACACTCTaGCTTTCCCGTGCATGCAGACACATCCATATATTAACTCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: ANIHPATHITQAGTL*LSRACRHIHILTLI Trigger: AATCAGAGTTAATATATGGATGTGTCTGCATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTGTATGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACAGTTGCAGCAAAGGATaGGAGAAAAGAGTGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VFGHQLRWCFLASSYKRDSCSKG*EKRVER Trigger: CCTCTCCACTCTTTTCTCTCATCCTTTGCTGCAACT...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATCAAGCACACGTGCATTCATTTCTCTCTGACTTTGACTGCAGACATAAACTTGCAGAGAAGGTCTaGGTGGCTGCTGCCTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QNQAHVHSFLSDFDCRHKLAEKV*VAAALA Trigger: TGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAG...TTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR TCA 90 bp | ACCATGACCATAACAAGGCATCTTGTAAGGTTCTCCATGAACACCCGGAGCGACAAAGATACCACCAAATaGGATACTGGATCCCACACT | + |
|
Preference number: 2 (lower is better) Translates to: TMTITRHLVRFSMNTRSDKDTTK*DTGSHT Trigger: AGTGTGGGATCCAGTATCTCATTTGGTGGTATCTTT...GTCGCTCCGGGTGTTCATGGAGAACCTTACAAGATGCCTTGTTATGGTCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR GCA 90 bp | CAAATCCACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACAGAGCATCCTCTGGGTaGCTGCTGTCTCTCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: QIHTDMVAMMLSFNCQLDRASSG*LLSLHH Trigger: ATGGTGGAGAGACAGCAGGCACCCAGAGGATGCTCT...GTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTGGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR GCA 90 bp | CACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACTCAATCCTTGGCAGGCAGAGCTaGTGTACTAGCCAGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HTDMVAMMLSFNCQLDSILGRQS*CTSQVL Trigger: TAGCACCTGGCTAGTACAGCAGCTCTGCCTGCCAAG...GATTGAGTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAAAGCTGCTTCAAATTCCTaGTTTAACTTCCCTGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SLACQFSPPHLHCSMDPKAASNS*FNFPEI Trigger: TATTTCAGGGAAGTTAAAGCAGGAATTTGAAGCAGC...TTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 90 bp | ACTTGTGCCATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTaGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACTATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TCAIYQSLVKDHKLS*SCMLGAGCSAITMQ Trigger: TTGCATAGTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATGGCACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACGATGGGGCAAGGAGATaGTCACCAATAAAGATACCA | + |
|
Preference number: 2 (lower is better) Translates to: VFGHQLRWCFLASSYKRDDGARR*SPIKIP Trigger: TGGTATCTTTATTGGTGATCATCTCCTTGCCCCATC...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CCA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACGGGATCCTCAGGCTTTaGGAGAAAGTTATTAACATA | + |
|
Preference number: 2 (lower is better) Translates to: RPQAFFELYAWSWLLCHYGILRL*EKVINI Trigger: TATGTTAATAACTTTCTCCCAAAGCCTGAGGATCCC...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR GCA 90 bp | GACCAAAGGTTCCCTCAGGGTTCTGTTATCAAATTTACTTCTTGCTGTAAAAGATCTTGGGAGTCTTACTaGTTCCTTCTCCAAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: DQRFPQGSVIKFTSCCKRSWESY*FLLQEG Trigger: TCCCTCTTGGAGAAGGAAGCAGTAAGACTCCCAAGA...TCTTTTACAGCAAGAAGTAAATTTGATAACAGAACCCTGAGGGAACCTTTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CCA 90 bp | GACCAAAGGTTCCCTCAGGGTTCTGTTATCAAATTTACTTCTTGCTGTAAAAGACAGACTTCTGCTAGCTaGGGACCAAGTGTTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: DQRFPQGSVIKFTSCCKRQTSAS*GPSVQT Trigger: TGTTTGAACACTTGGTCCCCAGCTAGCAGAAGTCTG...TCTTTTACAGCAAGAAGTAAATTTGATAACAGAACCCTGAGGGAACCTTTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR TCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGTTCTGTCCAGGCTTaGATAGATGTTGTGTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: HIPVFGERPQAFFELYAWSSVQA*IDVVCK Trigger: TTTACACACAACATCTATTCAAGCCTGGACAGAACT...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | GGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGGACCCTaGCAGAACCCAGCTGCTGATGCTGGGGTGGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGREGGREGEGP*QNPAADAGVGD Trigger: ATCTCCCACCCCAGCATCAGCAGCTGGGTTCTGGCAGGGTCCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | CCGCTTCTGTCCCCCATCAGCCAGCAAAGCATGGGGTaGAATGAGCTGAGCAGTAAGCGTCACAGAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLLSPISQQSMG*NELSSKRHRGP Trigger: GGGCCCTCTGTGACGCTTACTGCTCAGCTCATTTCACCCCATGCTTTGCTGGCTGATGGGGGACAGAAGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | AGGGACCCTGCCAGAACCCAGCTGCTGATGCTGGGGTaGGAGATGATACCGTGGAGAGATATGAGCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RDPARTQLLMLG*EMIPWRDMSSL Trigger: GAGGCTGCTCATATCTCTCCACGGTATCATCTCCCACCCCAGCATCAGCAGCTGGGTTCTGGCAGGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAAAGGGCACCTACAGGGTTaGGCTCTGGGCAGGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SLACQFSPPHLHCSMDPKGHLQG*ALGRRW Trigger: CCATCTCCTGCCCAGAGCCAAACCCTGTAGGTGCCC...TTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | ACTAGCCAGGTGCTAGGAGCATCCAGCATGAGCAGCTaGCTTCCAGCTCCCTCTAGACACAGGCTCAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TSQVLGASSMSS*LPAPSRHRLKR Trigger: GCGCTTGAGCCTGTGTCTAGAGGGAGCTGGAAGTCAGCTGCTCATGCTGGATGCTCCTAGCACCTGGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | GCCCCACTGCCTTGTGGTCCTGAAGTCCCAGGACATTaGCCATTGTACCCCATGTGGATGCAACCTCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: APLPCGPEVPGH*PLYPMWMQPQE Trigger: CTCCTGAGGTTGCATCCACATGGGGTACAATGGCCAATGTCCTGGGACTTCAGGACCACAAGGCAGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | CCCTTATGTCCTGCATGGAAGACCCTTGCTGCTCCATaGAACCAGGGCACCTTGTCCTTGGCAGGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLCPAWKTLAAP*NQGTLSLAGRA Trigger: AGCTCTGCCTGCCAAGGACAAGGTGCCCTGGTTTCATGGAGCAGCAAGGGTCTTCCATGCAGGACATAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | ATGAAACCAGGGCACCTTGTCCTTGGCAGGCAGAGCTaGTGTACTAGCCAGGTGCTAGGAGCATCCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: MKPGHLVLGRQS*CTSQVLGASSM Trigger: CATGCTGGATGCTCCTAGCACCTGGCTAGTACAGCAGCTCTGCCTGCCAAGGACAAGGTGCCCTGGTTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | AAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTaGAGGGGTGTGAGCTGCCTGGGCACATTGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: KAYSPSWQERHG*RGVSCLGTLHP Trigger: TGGATGCAATGTGCCCAGGCAGCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | AGAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATaGCTGCAGGGGTGTGAGCTGCCTGGGCACATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: REGIQSIMAGKA*LQGCELPGHIA Trigger: TGCAATGTGCCCAGGCAGCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | GTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTaGGCTGCCTGGGCACATTGCATCCATAGTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VHHGRKGMAAGV*AAWAHCIHSQE Trigger: TTCTTGACTATGGATGCAATGTGCCCAGGCAGCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | GCTTGGAGCTGGCTGCTCTGCCATTACTATGCAAGATaGCACCCCCTGGGACATTCAAGCACTCCCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AWSWLLCHYYAR*HPLGHSSTPKD Trigger: GTCCTTGGGAGTGCTTGAATGTCCCAGGGGGTGTCATCTTGCATAGTAATGGCAGAGCAGCCAGCTCCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | TCTTCAGCCCTTATGTCCTGCATGGAAGACCCTTGCTaGTCCATGAAACCAGGGCACCTTGTCCTTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSALMSCMEDPC*SMKPGHLVLGR Trigger: CCTGCCAAGGACAAGGTGCCCTGGTTTCATGGAGCAGCAAGGGTCTTCCATGCAGGACATAAGGGCTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTaGCTTGGCATACAAACAGGCCTCTGGGGCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SKSPCREGLSGC*LGIQTGLWGKV Trigger: CACTTTGCCCCAGAGGCCTGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | GTCTCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTaGTGCCTTGGCATACAAACAGGCCTCTGGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSKSPCREGLSG*CLGIQTGLWGK Trigger: TTTGCCCCAGAGGCCTGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | ACACAAGTAGTTGCAGCAAAGGATGAGAGAAAAGAGTaGAGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQVVAAKDERKE*RGREGGREGGK Trigger: CTTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCCACTCTTTTCTCTCATCCTTTGCTGCAACTACTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | GTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTaGCATACAAACAGGCCTCTGGGGCAAAGTGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VTLQRRSEWLLP*HTNRPLGQSVL Trigger: TAAGACACTTTGCCCCAGAGGCCTGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | CCAGAGGAGTCCAGAACTCTTGTCTCAAAGTCACCTTaGAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: PEESRTLVSKSP*REGLSGCCLGI Trigger: TATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGAGACAAGAGTTCTGGACTCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | CCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTaGATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQEVLCRSPNVA*MFSGLPILSSP Trigger: TGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | TACTGCTTCCTTCTCCAAGAGGGAGGAGCTAGGATGTaGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YCFLLQEGGARM*LKPSLSSMSWR Trigger: CCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATCCTAGCTCCTCCCTCTTGGAGAAGGAAGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCGTGTTCTGCAGACAGTaGGAGTTGCTGAAGGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: EKAYSPSWQERHGCRGVSVFCRQ*ELLKVI Trigger: TATTACCTTCAGCAACTCCAACTGTCTGCAGAACAC...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACGAGCCCAAATGTAGCTaGCATGTTCTCTGGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RPQAFFELYAWSWLLCHYEPKCS*HVLWPA Trigger: GGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTC...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGCCCCACAAGAGACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTAAGGACAGTAGTGGATaGGAGGAGGGGATAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISPTRDKTQHSPPHSKPAKDSSG*EEGIEK Trigger: TTTCTCTATCCCCTCCTCCAATCCACTACTGTCCTT...AGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGTCTCTTGTGGGGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACTGTCTCAAAGTCACCTaGCAGAGAAGGTCTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPQAFFELYAWSWLLCHYCLKVT*QRRSEW Trigger: CCACTCAGACCTTCTCTGCAAGGTGACTTTGAGACA...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | AGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTaGGTTACACAAGTAGTTGCAGCAAAGGATGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SPHCPPCLGGPG*VTQVVAAKDER Trigger: TCTCTCATCCTTTGCTGCAACTACTTGTGTAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | TTGTACCCCATGTGGATGCAACCTCAGGAGGTTTTATaGAGGAGCCCAAATGTAGCTTGCATGTTCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LYPMWMQPQEVL*RSPNVACMFSG Trigger: GCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | ATGAAGTTAATTGATTTGGGAAGACCCAACCCACTGTaGGCAGTACCATTCCCTAGGCAGGAGGTCCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: MKLIDLGRPNPL*AVPFPRQEVLN Trigger: GTTGAGGACCTCCTGCCTAGGGAATGGTACTGCCCACAGTGGGTTGGGTCTTCCCAAATCAATTAACTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | CCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATaGACCCAAAATTCTCAGACTCTGGTACTTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PANSLLPISIAP*TQNSQTLVLKV Trigger: CACCTTAAGTACCAGAGTCTGAGAATTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | TTTATGCAGGAGCCCAAATGTAGCTTGCATGTTCTCTaGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FMQEPKCSLHVL*PANSLLPISIA Trigger: AGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | GTGCTTATAGAAATGGCCAGCTCAACTCCAGGACCCTaGAACCAAGGACCTGTGCTCAGATTTAAAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: VLIEMASSTPGP*NQGPVLRFKVW Trigger: CCATACTTTAAATCTGAGCACAGGTCCTTGGTTCCAGGGTCCTGGAGTTGAGCTGGCCATTTCTATAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAAACATTTCTCTCTGACTTaGACTGCAGACATAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLACQFSPPHLHCSMDPKHFSLT*TADINV Trigger: TACATTTATGTCTGCAGTCAAAGTCAGAGAGAAATG...TTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | TATGGTGATGGCGCTGTTCAAATATCTTCACTGGGATaGCCCAGGATAAGAAACTCCCGCTTAACAGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: YGDGAVQISSLG*PRIRNSRLTAM Trigger: CATAGCTGTTAAGCGGGAGTTTCTTATCCTGGGGCATCCCAGTGAAGATATTTGAACAGCGCCATCACCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160609.2 |
||
| 3UTR CCA 72 bp | TCTTGTACCATAAGAATTTCAGGGAAAATAGCCGACTaGGCTATGCACTTGCTGCACAAGATCCCCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: SCTIRISGKIAD*AMHLLHKIPQT Trigger: GGTTTGGGGGATCTTGTGCAGCAAGTGCATAGCCCAGTCGGCTATTTTCCCTGAAATTCTTATGGTACAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | ACCCAGAAAGAGAGTCACAATAGGAATTGTCTATGCTaGGTTATACGGTGGGAAGGTCTAAGAGGACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQKESHNRNCLC*VIRWEGLRGLS Trigger: AGACAGTCCTCTTAGACCTTCCCACCGTATAACCCAGCATAGACAATTCCTATTGTGACTCTCTTTCTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CCA 72 bp | TGGGCACATTGCATCCATAGTCAAGAAGCAGAGAGTTaGTGGGACGTCTTGTACCATAAGAATTTCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WAHCIHSQEAES*WDVLYHKNFRE Trigger: TTCCCTGAAATTCTTATGGTACAAGACGTCCCACCAACTCTCTGCTTCTTGACTATGGATGCAATGTGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATCAAGCACACGTGCATTCATTTCTCTCTGACTTTGACTGCAGACATAAATGGCTAAAGCCCTCATaGTCCTCCATGTCTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNQAHVHSFLSDFDCRHKWLKPS*SSMSWR Trigger: CCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCA...TTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGGAGTCCAGAACTCTaGTCTCAAAGTCACCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HIPVFGERPQAFFELYAWRSPEL*SQSHLA Trigger: TGCAAGGTGACTTTGAGACAAGAGTTCTGGACTCCT...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | ACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTaGATGCAGACACATCCATATATTAACTCTGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: THHSGRHTLAFP*MQTHPYINSDL Trigger: TAAATCAGAGTTAATATATGGATGTGTCTGCATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACGGTTGCTTTGTGGGATaGCTAACATATTTATTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VFGHQLRWCFLASSYKRDGCFVG*LTYLFH Trigger: GTGGAATAAATATGTTAGCAATCCCACAAAGCAACC...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR TCA 72 bp | ATTTATTCCACAAGGAGGGGAGATGGGGCAAGGAGATaGTCACCAATAAAGATACCACCAAATGAGATACTG | + |
|
Preference number: 3 (lower is better) Translates to: IYSTRRGDGARR*SPIKIPPNEIL Trigger: CAGTATCTCATTTGGTGGTATCTTTATTGGTGATCATCTCCTTGCCCCATCTCCCCTCCTTGTGGAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | CAAGCACACGTGCATTCATTTCTCTCTGACTTTGACTaGAGACATAAATGTAACCAGCTGCTTCAAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QAHVHSFLSDFD*RHKCNQLLQIP Trigger: AGGAATTTGAAGCAGCTGGTTACATTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR GCA 72 bp | TGCAGACACATCCATATATTAACTCTGATTTATAAGTaGACCCTAACCAGAGGGCAATTGGAAAGAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CRHIHILTLIYK*TLTRGQLERSN Trigger: ATTGCTTCTTTCCAATTGCCCTCTGGTTAGGGTGCACTTATAAATCAGAGTTAATATATGGATGTGTCTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCATGGCGCTGTGCGCGCTaGGGTTGGCCACCTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLACQFSPPHLHCSMDPWRCAR*GWPPLR Trigger: GCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCA...TGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | TACACCCAGCCACACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTGCATTTCAGGACCGCATCCTaGATGGGGCTGGCGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQPHTSLRQAHSCFPVHFRTAS*MGLALC Trigger: GCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAA...ATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCGTGTGGGTGTGTGATTaGCAGCGCTGTGGACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EKAYSPSWQERHGCRGVSVWVCD*QRCGLT Trigger: GGTCAGTCCACAGCGCTGTCAATCACACACCCACAC...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GTAAGCGTCACAGAGGGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTACAGCCCAGCCAGCAGTaGATTCCACGTGAGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVTEGPVPITRLTLQPLQPSQQ*IPREHR Trigger: TCGATGCTCACGTGGAATTCACTGCTGGCTGGGCTG...TAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCCCTCTGTGACGCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | CCCCATGTGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTGGAGGTTGGCCACCTCTaGGCGAGGCCGGATCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHVDATSGGFMQEPKCSLEVGHL*ARPDLV Trigger: CACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTC...CAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | TACACCCAGCCACACACATCACTCAGGCAGGCACACTCTTGCTTTCCCGTGCATCAGAGGGGGAAAGGGTaGCAGGAAGGCCTCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQPHTSLRQAHSCFPVHQRGKG*QEGLLC Trigger: GCAAAGGAGGCCTTCCTGCCACCCTTTCCCCCTCTG...ATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGCCCAGAGCACCTAAGTaGAGGAACCCTTCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVPITRLTLQPLCPAWKPRAPK*RNPSLV Trigger: CACCAAGGAAGGGTTCCTGCACTTAGGTGCTCTGGG...CTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCAAAAGAAGGATTAGGTCGATaGCGGCCAGGCCCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLACQFSPPHLHCSMDPKEGLGR*RPGPGS Trigger: AGAACCGGGGCCTGGCCGGCATCGACCTAATCCTTC...TTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCATCATGGCTGGTGTTCTaGTGGGGAGAGAGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLACQFSPPHLHCSMDPSWLVF*WGERDL Trigger: GAGATCCCTCTCTCCCCATCAGAACACCAGCCATGA...TGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGCATACAGTCCATCATGGCAGGAAAGGCATGGCTGCAGGGGTGTGAGCCCTGTTGACCACAAATaGGCAGCCAATCATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKAYSPSWQERHGCRGVSPVDHK*AANHGW Trigger: CCAGCCATGATTGGCTGCTCATTTGTGGTCAACAGG...GCTCACACCCCTGCAGCCATGCCTTTCCTGCCATGATGGACTGTATGCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | GGCTCTGGGCAGGAGATGGCCAAGGACAGTAGTGGATaGGAGGAGGGGATAGAGAAAGGTTACCCTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSGQEMAKDSSG*EEGIEKGYPSM Trigger: CATGCTAGGGTAACCTTTCTCTATCCCCTCCTCCAATCCACTACTGTCCTTGGCCATCTCCTGCCCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | GATGTGGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTACAGGAAGGCCTCCTTTaGCCCTCCCACCATACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVAKALIVLHVLEVQGELQEGLL*PSHHTL Trigger: AAGGGTATGGTGGGAGGGGCAAAGGAGGCCTTCCTG...TAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACACGCTTCCGGTTTTCCTaGATGCGGGACAGAACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCREGLSGCCLGIQTRFRFS*MRDRTG Trigger: GCCCGTTCTGTCCCGCATCCAGGAAAACCGGAAGCG...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCTTCTTCCGCTCAATGTaGGCCACCCTTGAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRPNTPHHIASQLDRHPAFFRSM*ATLEHG Trigger: TCCATGTTCAAGGGTGGCCCACATTGAGCGGAAGAA...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACGCGGCAACCGACTCTTaGAGTTGTCCACCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQAFFELYAWSWLLCHYAATDS*SCPPGS Trigger: GCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGC...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | CAAGAGGGAGGAGCTAGGATGTGGCTAAAGCCCTCATaGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QEGGARMWLKPS*SSMSWRSRVSY Trigger: GTAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATCCTAGCTCCTCCCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCACACCAACAACACTTTaGCTCTCCTCAGTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRPNTPHHIASQLDRHPATPTTL*LSSVKP Trigger: TGGCTTCACTGAGGAGAGTCAAAGTGTTGTTGGTGT...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | CCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGACCGCAGTGAATTCCACGTaGGCATCGAAAAAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVPITRLTLQPLCPAWKTAVNST*ASKKPV Trigger: CACTGGCTTTTTCGATGCTCACGTGGAATTCACTGC...GGTCTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GTAAGCGTCACAGAGGGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTACGCTATGTACACATGTaGCTTGTAGTCGTCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVTEGPVPITRLTLQPLRYVHM*LVVVHP Trigger: TGGATGGACGACTACAAGTCACATGTGTACATAGCG...TAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCCCTCTGTGACGCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACATCCGGTTTTCCTGGATaGGGGACAGAACGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCREGLSGCCLGIQTSGFPG*GTERAQ Trigger: CTGAGCCCGTTCTGTCCCGCATCCAGGAAAACCGGA...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCACATCACCGATATCGATaGCTGGATTCTCCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLACQFSPPHLHCSMDPHHRYR*LDSPEA Trigger: TGCCTCTGGAGAATCCAGGCATCGATATCGGTGATG...TGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGCGAGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWRGRIS*KASPLR Trigger: GCGCAGCGGAGACGCCTTCCACGAGATCCGGCCTCG...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACTCAATCGGACCGCATCCTGGATaGGGCTGGCGCTGTGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTDMVAMMLSFNCQLDSIGPHPG*GWRCAR Trigger: GCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCC...GATTGAGTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CCCCATGTGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTGTGTGTGGTTTTCCAGTaGCCCCTGGTCCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHVDATSGGFMQEPKCSLCVVFQ*PLVQTD Trigger: GTCTGTCTGGACCAGGGGCCACTGGAAAACCACACA...CAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | CAGGCTCAAGCGCTGATGCTGTCCATATTTAGGGCTTaGGGTGACTGGGACAGGGAACCTCAAGAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QAQALMLSIFRA*GDWDREPQEQS Trigger: GGATTGTTCTTGAGGTTCCCTGTCCCAGTCACCCAAAGCCCTAAATATGGACAGCATCAGCGCTTGAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | ACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTaGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGGFMQEPKCS*HVLWPANSLLP Trigger: GGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | CTGCCTTGTGGTCCTGAAGTCCCAGGACATTGGCCATaGTACCCCATGTGGATGCAACCTCAGGAGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPCGPEVPGHWP*YPMWMQPQEVL Trigger: TAAAACCTCCTGAGGTTGCATCCACATGGGGTACAATGGCCAATGTCCTGGGACTTCAGGACCACAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACCGATGGAGGGGAGGATaGCCCGCTTCCGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFGHQLRWCFLASSYKRDRWRGG*PASGFP Trigger: AGGAAAACCGGAAGCGGGTCATCCTCCCCTCCATCG...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | GATGTGGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTATCCCCAACCGTGGCATaGGTACAGTATTGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVAKALIVLHVLEVQGELSPTVA*VQYCCV Trigger: CACACAGCAATACTGTACCCATGCCACGGTTGGGGA...TAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGCAAAGAATTTCCTGTTaGCCACAAATGAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPVPITRLTLQPLCPAWKQRISC*PQMSSQ Trigger: TTGGCTGCTCATTTGTGGTCAACAGGAAATTCTTTG...CTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | ACCATGACCATAACAAGGCATCTTGTAAGGTTCTCCATGAACACCCGGAGCGACGCAGCCAATCATGGCTaGTGTTCTGATGGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMTITRHLVRFSMNTRSDAANHG*CSDGER Trigger: TCTCTCCCCATCAGAACACCAGCCATGATTGGCTGC...GTCGCTCCGGGTGTTCATGGAGAACCTTACAAGATGCCTTGTTATGGTCATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | CCTCTGGGGCAAAGTGTCTTAAGGAGAAATGGAGTCTaGGGAGTCTTACTGCTTCCTTCTCCAAGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLGQSVLRRNGV*GVLLLPSPRGR Trigger: CCTCCCTCTTGGAGAAGGAAGCAGTAAGACTCCCAAGACTCCATTTCTCCTTAAGACACTTTGCCCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | CACCCAGCCACACACATCACTCAGGCAGGCACACTCTaGCTTTCCCGTGCATGCAGACACATCCATATATTA | + |
|
Preference number: 4 (lower is better) Translates to: HPATHITQAGTL*LSRACRHIHIL Trigger: TAATATATGGATGTGTCTGCATGCACGGGAAAGCAAGAGTGTGCCTGCCTGAGTGATGTGTGTGGCTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | TTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATaGCTCCATGGACCCAAAATTCTCAGACTCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSGLPILSSPSP*LHGPKILRLWY Trigger: GTACCAGAGTCTGAGAATTTTGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCAGATGAGAATAAGGGGAAGATCTTCAAAGTACACAGGCAGAATGCCTCGAAGTTGTCCTGCTTaGTGTTGTCGATGGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPQMRIRGRSSKYTGRMPRSCPA*CCRWRG Trigger: TCCCCTCCATCGACAACATCAAGCAGGACAACTTCG...AGGCATTCTGCCTGTGTACTTTGAAGATCTTCCCCTTATTCTCATCTGGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | ACCATGACCATAACAAGGCATCTTGTAAGGTTCTCCATGAACACCCGGAGCGACCTTCTCGCTTTTGATTaGGTACCACCTTCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TMTITRHLVRFSMNTRSDLLAFD*VPPSPA Trigger: GGCTGGTGAAGGTGGTACGCAATCAAAAGCGAGAAG...GTCGCTCCGGGTGTTCATGGAGAACCTTACAAGATGCCTTGTTATGGTCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | CAAATCCACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACCCAGCCCTCGATGCGTaGTCGGATCAGGCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QIHTDMVAMMLSFNCQLDPALDA*SDQAFS Trigger: CGAGAAGGCCTGATCCGAGCACGCATCGAGGGCTGG...GTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTGGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACGAAGGACCTCCATGCTaGCACCACAGAGCCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: VFGHQLRWCFLASSYKRDEGPPC*HHRAIP Trigger: AGGTATGGCTCTGTGGTGGCAGCATGGAGGTCCTTC...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACTCACAATCCAGGAGCTaGGGCAACCGACTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFGHQLRWCFLASSYKRDSQSRS*GNRLLE Trigger: CTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGA...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | GATGTGGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTAGGTAGGACGATAATCTaGAATAGACCGGTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DVAKALIVLHVLEVQGELGRTII*NRPVQG Trigger: TCCTTGGACCGGTCTATTCCAGATTATCGTCCTACC...TAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCAGATGAGAATAAGGGGAAGATCTTCAAAGTACACAGGCAGAATGCCTGTCCCACCAGTCTTTTaGGGGGCTGATGTACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPQMRIRGRSSKYTGRMPVPPVF*GADVHA Trigger: TGCATGTACATCAGCCCCCCAAAAGACTGGTGGGAC...AGGCATTCTGCCTGTGTACTTTGAAGATCTTCCCCTTATTCTCATCTGGGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGGCAGGAACCCTTCCTTaGTGTAGCGGGCGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWAGTLP*CSGRAV Trigger: CACAGCTCGCCCGCTACACCAAGGAAGGGTTCCTGC...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | ACCCGGAGCGACTATGTGTTCTGCAGACAGTTGGAGTaGCTGAAGGTAATAGAAGGAGGAGATCAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSDYVFCRQLE*LKVIEGGDQVS Trigger: GGATACCTGATCTCCTCCTTCTATTACCTTCAGCAACTCCAACTGTCTGCAGAACACATAGTCGCTCCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | CAAAATCAAGCACACGTGCATTCATTTCTCTCTGACTTTGACTGCAGACATAAACTTTCCAGCCCTCGATaGGTGCTCGGATCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNQAHVHSFLSDFDCRHKLSSPR*VLGSGL Trigger: AAGGCCTGATCCGAGCACGCATCGAGGGCTGGAAAG...TTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACAGCAATGCATTCCTCTTaGTGTAAAAGCCGATGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCREGLSGCCLGIQTAMHSS*CKSRCY Trigger: GTAACATCGGCTTTTACACCAAGAGGAATGCATTGC...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGTGTGGTCCCCAACCGTaGCATGGGTACAGTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWCGPQP*HGYSIA Trigger: AGCAATACTGTACCCATGCCACGGTTGGGGACCACA...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | AGAATTTCAGGGAAAATAGCCGACTGGGCTATGCACTaGCTGCACAAGATCCCCCAAACCCATGTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RISGKIADWAMH*LHKIPQTHVKL Trigger: AAGCTTTACATGGGTTTGGGGGATCTTGTGCAGCAAGTGCATAGCCCAGTCGGCTATTTTCCCTGAAATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTCACCTTGCAGAGAAGGTCTGAGTGGCTGCTGCCTTGGCATACAAACAAAGATGATGGATATCTaGGGCAACTCCTTGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCREGLSGCCLGIQTKMMDI*GNSLEY Trigger: ATATTCCAAGGAGTTGCCCCAGATATCCATCATCTT...TGTTTGTATGCCAAGGCAGCAGCCACTCAGACCTTCTCTGCAAGGTGACTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGTACAGTATTGCTGTGTaGTTTTCCAGTGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWYSIAV*FSSGPW Trigger: CCAGGGGCCACTGGAAAACCACACAGCAATACTGTA...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | ATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTaGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IYQSLVKDHKLS*SCMLGAGCSAI Trigger: AATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGTGTACAAGCTGCTCTTaGCCTTGTCACAATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWCTSCS*PCHNPG Trigger: TCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACA...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR TCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGGAGATCTTTTCACTaGGGTAGGAATTGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWRRSFH*GRNCSH Trigger: ATGGCTACAATTCCTACCTCAGTGAAAAGATCTCCT...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR GCA 90 bp | CACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACTCAATCACTTCGAAGTTGTCCTaGTTGATGTTGTCGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTDMVAMMLSFNCQLDSITSKLS*LMLSME Trigger: CTCCATCGACAACATCAAGCAGGACAACTTCGAAGT...GATTGAGTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | GGAGGTCCTCAACTATATAATAGCAGAGAAGCTGAGTaGAGCAAAATCAAGCACACGTGCATTCATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPQLYNSREAE*SKIKHTCIHFS Trigger: AGAGAAATGAATGCACGTGTGCTTGATTTTGCTCAACTCAGCTTCTCTGCTATTATATAGTTGAGGACCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | GACTTTGATAGCTTGGGCATCTATCAGGAACAGGCTTaGATAGCTCGGGCACAAACTAGAAATACTATATGT | + |
|
Preference number: 4 (lower is better) Translates to: DFDSLGIYQEQA*IARAQTRNTIC Trigger: ACATATAGTATTTCTAGTTTGTGCCCGAGCTATCAAAGCCTGTTCCTGATAGATGCCCAAGCTATCAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CCA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGGTATCTTCTCATTTCTaGGTAAACATGGTCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HIPVFGERPQAFFELYAWVSSHF*VNMVQI Trigger: TATTTGGACCATGTTTACCCAGAAATGAGAAGATAC...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| 3UTR CAA 72 bp | AAAATCAAGCACACGTGCATTCATTTCTCTCTGACTTaGACTGCAGACATAAATGTAACCAGCTGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KIKHTCIHFSLT*TADINVTSCFK Trigger: TTTGAAGCAGCTGGTTACATTTATGTCTGCAGTCAAAGTCAGAGAGAAATGAATGCACGTGTGCTTGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS GCA 90 bp | ATCCTGGATGGGGCTGGCGCTGTGCGCGCTGAGGTTGGCCACCTCTaGGCGAGGCCGGATCTCGTGGAAGGCGTCTCCGCTGCGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: ILDGAGAVRAEVGHL*ARPDLVEGVSAAHR Trigger: GCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS TCA 90 bp | AGCGCTTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTaGGGTTGGCCACCTCTGCGCGAGGCCGGATCTCGTGGAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SASGPHPGWGWRCAR*GWPPLREAGSRGRR Trigger: ACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS GCA 90 bp | AGCGACAAGCGCTTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTaGGCGCTGAGGTTGGCCACCTCTGCGCGAGGCCGGATCTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDKRFRTASWMGLAL*ALRLATSARGRISW Trigger: CCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCTTGTCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS CCA 90 bp | CTGTGCGCGCTGAGGTTGGCCACCTCTGCGCGAGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGCACCGCGATAGGCCGACACTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCALRLATSARGRIS*KASPLRTAIGRHLA Trigger: GGCTAAGTGTCGGCCTATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS CCA 90 bp | GGAGAGTGGTGGTCCCCAGAGCACCTAAGTGCAGGAACCCTTCCTTaGTGTAGCGGGCGAGCTGTGGTCCCCAACCGTGGCATGGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GEWWSPEHLSAGTLP*CSGRAVVPNRGMGT Trigger: TGTACCCATGCCACGGTTGGGGACCACAGCTCGCCCGCTACACCAAGGAAGGGTTCCTGCACTTAGGTGCTCTGGGGACCACCACTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS TCA 90 bp | ATGCGGGACAGAACGGGCTCAGCCCAGCCAGCAGTGAATTCCACGTaGGCATCGAAAAAGCCAGTGACCTGGCCAGTGGCCGCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRDRTGSAQPAVNST*ASKKPVTWPVAAFQ Trigger: CTGGAAAGCGGCCACTGGCCAGGTCACTGGCTTTTTCGATGCTCACGTGGAATTCACTGCTGGCTGGGCTGAGCCCGTTCTGTCCCGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGGCTAAAGCCCTCATTGTCCTCCATGTCTTGGAGGTCCAGGGTGAGTTACTGTGCGCGCTGAGGTaGGCCACCTCTGCGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DVAKALIVLHVLEVQGELLCALR*ATSARG Trigger: GCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAG...TAACTCACCCTGGACCTCCAAGACATGGAGGACAATGAGGGCTTTAGCCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS CCA 90 bp | TCTTGGAGTTGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTGGTaGTCCCCAGAGCACCTAAGTGCAGGAACCCTTCCTTGGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWSCPPGSGYQGGEW*SPEHLSAGTLPWCS Trigger: GCTACACCAAGGAAGGGTTCCTGCACTTAGGTGCTCTGGGGACCACCACTCTCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS CCA 90 bp | GACTCTTGGAGTTGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTaGTGGTCCCCAGAGCACCTAAGTGCAGGAACCCTTCCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSWSCPPGSGYQGGE*WSPEHLSAGTLPWC Trigger: ACACCAAGGAAGGGTTCCTGCACTTAGGTGCTCTGGGGACCACCACTCTCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS GCA 90 bp | TCCAGCCCTCGATGCGTGCTCGGATCAGGCCTTCTCGCTTTTGATTaGGTACCACCTTCACCAGCCCAGGGTAGCGTTTGTGGACGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSPRCVLGSGLLAFD*VPPSPAQGSVCGRT Trigger: AGTACGTCCACAAACGCTACCCTGGGCTGGTGAAGGTGGTACGCAATCAAAAGCGAGAAGGCCTGATCCGAGCACGCATCGAGGGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCTCCATGGACCCATGCGGCAACCGACTCTaGGAGTTGTCCACCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLACQFSPPHLHCSMDPCGNRL*ELSTRQ Trigger: CTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCA...TGGGTCCATGGAGCAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS GCA 90 bp | CAACGCTTGTACAAGCTGCTCTTGACCTTGTCACAATCCAGGAGCTaGGGCAACCGACTCTTGGAGTTGTCCACCAGGCAGCGGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: QRLYKLLLTLSQSRS*GNRLLELSTRQRVS Trigger: TGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGACCAAGCTGCTCTTGACCTaGTCACAATCCAGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVPITRLTLQPLCPAWKTKLLLT*SQSRSC Trigger: GCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTT...GGTCTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | ACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTGGACAGACATCCTGCCATCTGGGGCAACTCCTaGGAATATTTGAGCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TRPNTPHHIASQLDRHPAIWGNS*EYLSSL Trigger: TAAGGAGCTCAAATATTCCAAGGAGTTGCCCCAGAT...GGCAGGATGTCTGTCCAGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | CCCCATGTGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTGCGCTGCACTTCGAAGTaGTCCTGCTTGATGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PHVDATSGGFMQEPKCSLRCTSK*SCLMLS Trigger: CGACAACATCAAGCAGGACAACTTCGAAGTGCAGCG...CAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGTGCCCATCACTAGGCTGACTCTTCAGCCCTTATGTCCTGCATGGAAGCCACAGAGCCATACCTaGATCCCAAGTTCAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: GPVPITRLTLQPLCPAWKPQSHT*IPSSIF Trigger: GAATATTGAACTTGGGATCAAGGTATGGCTCTGTGG...CTTCCATGCAGGACATAAGGGCTGAAGAGTCAGCCTAGTGATGGGCACAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS TCA 90 bp | GATGCCTGGATTCTCCAGAGGCAGATTCCACGCTATGTACACATGTaGCTTGTAGTCGTCCATCCAGACCTCGGCTACTCGCAATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: DAWILQRQIPRYVHM*LVVVHPDLGYSQCI Trigger: AATGCATTGCGAGTAGCCGAGGTCTGGATGGACGACTACAAGTCACATGTGTACATAGCGTGGAATCTGCCTCTGGAGAATCCAGGCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGGCAGGAAGGCCTCCTTaGCCCCTCCCACCATACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HIPVFGERPQAFFELYAWAGRPP*PLPPYP Trigger: AGGGTATGGTGGGAGGGGCAAAGGAGGCCTTCCTGC...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | AATGTAGCTTGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGCAGGCCTTCTCGCTTTaGATTGCGTACCACCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVACMFSGLPILSSPSPLQAFSL*IAYHLH Trigger: GTGAAGGTGGTACGCAATCAAAAGCGAGAAGGCCTG...CAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | AATGTAGCTTGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGTTGTCCTGCTTGATGTaGTCGATGGAGGGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NVACMFSGLPILSSPSPLLSCLM*SMEGRM Trigger: CATCCTCCCCTCCATCGACAACATCAAGCAGGACAA...CAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | AGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAGCTGGCTGCTCTGCCATTACTCGAAGTTGTCCTGCTaGATGTTGTCGATGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPQAFFELYAWSWLLCHYSKLSC*MLSMEG Trigger: CCCCTCCATCGACAACATCAAGCAGGACAACTTCGA...GTAATGGCAGAGCAGCCAGCTCCAAGCATACAGCTCAAAGAAAGCTTGTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | ATTAGCCCCACAAGAGACAAGACCCAACACTCCCCACCACATAGCAAGCCAGCTTTGTACAAGCTGCTCTaGACCTTGTCACAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPTRDKTQHSPPHSKPALYKLL*TLSQSR Trigger: CCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAA...AGCTGGCTTGCTATGTGGTGGGGAGTGTTGGGTCTTGTCTCTTGTGGGGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | GTGTTCGGACATCAACTAAGATGGTGCTTCCTGGCTTCTTCCTACAAAAGAGACCAATGTGGGCCACCCTaGAACATGGAAGGACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFGHQLRWCFLASSYKRDQCGPP*NMEGPP Trigger: TGGAGGTCCTTCCATGTTCAAGGGTGGCCCACATTG...GTCTCTTTTGTAGGAAGAAGCCAGGAAGCACCATCTTAGTTGATGTCCGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | AATGTAGCTTGCATGTTCTCTGGCCTGCCAATTCTCTCCTCCCCATCTCCATTGGGCATGGGTACAGTATaGCTGTGTGGTTTTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVACMFSGLPILSSPSPLGMGTV*LCGFPV Trigger: CACTGGAAAACCACACAGCAATACTGTACCCATGCC...CAATGGAGATGGGGAGGAGAGAATTGGCAGGCCAGAGAACATGCAAGCTACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | CCCCATGTGGATGCAACCTCAGGAGGTTTTATGCAGGAGCCCAAATGTAGCTTGATGAAGTTCCAACGCTaGTACAAGCTGCTCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PHVDATSGGFMQEPKCSLMKFQR*YKLLLT Trigger: GGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCAT...CAAGCTACATTTGGGCTCCTGCATAAAACCTCCTGAGGTTGCATCCACATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS CCA 90 bp | TGTAGTCGTCCATCCAGACCTCGGCTACTCGCAATGCATTCCTCTTaGTGTAAAAGCCGATGTTACTGTTATACGGTTTCTTCTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRPSRPRLLAMHSS*CKSRCYCYTVSSSA Trigger: AGCGGAAGAAGAAACCGTATAACAGTAACATCGGCTTTTACACCAAGAGGAATGCATTGCGAGTAGCCGAGGTCTGGATGGACGACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | GACCAAAGGTTCCCTCAGGGTTCTGTTATCAAATTTACTTCTTGCTGTAAAAGAAACCGACTCTTGGAGTaGTCCACCAGGCAGCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DQRFPQGSVIKFTSCCKRNRLLE*STRQRV Trigger: TACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTT...TCTTTTACAGCAAGAAGTAAATTTGATAACAGAACCCTGAGGGAACCTTTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
||
| CDS-3UTR CAA 90 bp | CACACAGACATGGTAGCAATGATGCTCAGCTTTAATTGTCAACTTGACTCAATCTACTTGATGGGATTCTaGATTGCCCATCTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTDMVAMMLSFNCQLDSIYLMGF*IAHLCP Trigger: TGGACAGAGATGGGCAATCAAGAATCCCATCAAGTA...GATTGAGTCAAGTTGACAATTAAAGCTGAGCATCATTGCTACCATGTCTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS-3UTR CAA 90 bp | CATATACCAGTCTTTGGTGAAAGACCACAAGCTTTCTTTGAGCTGTATGCTTGGAACTCCTTGGAATATTaGAGCTCCTTACACTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: HIPVFGERPQAFFELYAWNSLEY*SSLHLV Trigger: TACCAAGTGTAAGGAGCTCAAATATTCCAAGGAGTT...CCAAGCATACAGCTCAAAGAAAGCTTGTGGTCTTTCACCAAAGACTGGTATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 90 bp | ACGAAGCTCCCCATAGGCGATAGTGTTGTTGTATCTTCTCATTTCTaGGTAAACATGGTCCAAATACCACTGGAAATTCTTACATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: TKLPIGDSVVVSSHF*VNMVQIPLEILTFQ Trigger: TTGAAATGTAAGAATTTCCAGTGGTATTTGGACCATGTTTACCCAGAAATGAGAAGATACAACAACACTATCGCCTATGGGGAGCTTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS GCA 72 bp | GGGGCTGGCGCTGTGCGCGCTGAGGTTGGCCACCTCTaGGCGAGGCCGGATCTCGTGGAAGGCGTCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GAGAVRAEVGHL*ARPDLVEGVSA Trigger: AGCGGAGACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS TCA 72 bp | GGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTaGGGTTGGCCACCTCTGCGCGAGGCCGGATCTCGT | + |
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Preference number: 6 (lower is better) Translates to: GPHPGWGWRCAR*GWPPLREAGSR Trigger: ACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CAA 90 bp | TTCAGGACCGCATCCTGGATGGGGCTGGCGCTGTGCGCGCTGAGGTaGGCCACCTCTGCGCGAGGCCGGATCTCGTGGAAGGCGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: FRTASWMGLALCALR*ATSARGRISWKASP Trigger: CGGAGACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CCA 72 bp | CTGAGGTTGGCCACCTCTGCGCGAGGCCGGATCTCGTaGAAGGCGTCTCCGCTGCGCACCGCGATAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: LRLATSARGRIS*KASPLRTAIGR Trigger: TCGGCCTATCGCGGTGCGCAGCGGAGACGCCTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CAA 72 bp | GCATCCTGGATGGGGCTGGCGCTGTGCGCGCTGAGGTaGGCCACCTCTGCGCGAGGCCGGATCTCGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASWMGLALCALR*ATSARGRISWK Trigger: CTTCCACGAGATCCGGCCTCGCGCAGAGGTGGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CCA 72 bp | TCCTCCAGCAGCGACAAGCGCTTCAGGACCGCATCCTaGATGGGGCTGGCGCTGTGCGCGCTGAGGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSDKRFRTAS*MGLALCALRLA Trigger: GGCCAACCTCAGCGCGCACAGCGCCAGCCCCATCCAGGATGCGGTCCTGAAGCGCTTGTCGCTGCTGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CCA 72 bp | TGGTCCCCAGAGCACCTAAGTGCAGGAACCCTTCCTTaGTGTAGCGGGCGAGCTGTGGTCCCCAACCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WSPEHLSAGTLP*CSGRAVVPNRG Trigger: GCCACGGTTGGGGACCACAGCTCGCCCGCTACACCAAGGAAGGGTTCCTGCACTTAGGTGCTCTGGGGACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | TCTTCAGAGGGGGAAAGGGTGGCAGGAAGGCCTCCTTaGCCCCTCCCACCATACCCTTCGATGAGCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSEGERVAGRPP*PLPPYPSMSPR Trigger: CCTCGGGCTCATCGAAGGGTATGGTGGGAGGGGCAAAGGAGGCCTTCCTGCCACCCTTTCCCCCTCTGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CCA 72 bp | GGTGTAGCGGGCGAGCTGTGGTCCCCAACCGTGGCATaGGTACAGTATTGCTGTGTGGTTTTCCAGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GVAGELWSPTVA*VQYCCVVFQWP Trigger: GGGCCACTGGAAAACCACACAGCAATACTGTACCCATGCCACGGTTGGGGACCACAGCTCGCCCGCTACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | TGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTGGTaGTCCCCAGAGCACCTAAGTGCAGGAACCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPPGSGYQGGEW*SPEHLSAGTLP Trigger: AGGAAGGGTTCCTGCACTTAGGTGCTCTGGGGACCACCACTCTCCTCCCTGATACCCGCTGCCTGGTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | GCCCTCGATGCGTGCTCGGATCAGGCCTTCTCGCTTTaGATTGCGTACCACCTTCACCAGCCCAGGGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: ALDACSDQAFSL*IAYHLHQPRVA Trigger: CGCTACCCTGGGCTGGTGAAGGTGGTACGCAATCAAAAGCGAGAAGGCCTGATCCGAGCACGCATCGAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CAA 90 bp | TTGACCTTGTCACAATCCAGGAGCTGCGGCAACCGACTCTTGGAGTaGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTGGTGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LTLSQSRSCGNRLLE*STRQRVSGRRVVVP Trigger: GGGGACCACCACTCTCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS TCA 72 bp | AGAACGGGCTCAGCCCAGCCAGCAGTGAATTCCACGTaGGCATCGAAAAAGCCAGTGACCTGGCCAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTGSAQPAVNST*ASKKPVTWPVA Trigger: GGCCACTGGCCAGGTCACTGGCTTTTTCGATGCTCACGTGGAATTCACTGCTGGCTGGGCTGAGCCCGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS GCA 72 bp | ATCTCTGTCCAGTACAGCTTCGAAGGATTAGGTCGATaGCGGCCAGGCCCCGGTTCTCCACCTCTAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISVQYSFEGLGR*RPGPGSPPLGS Trigger: GCTGCCTAGAGGTGGAGAACCGGGGCCTGGCCGGCATCGACCTAATCCTTCGAAGCTGTACTGGACAGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | GTGCAGGAACCCTTCCTTGGTGTAGCGGGCGAGCTGTaGTCCCCAACCGTGGCATGGGTACAGTATTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VQEPFLGVAGEL*SPTVAWVQYCC Trigger: ACAGCAATACTGTACCCATGCCACGGTTGGGGACCACAGCTCGCCCGCTACACCAAGGAAGGGTTCCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | CCTTGTCACAATCCAGGAGCTGCGGCAACCGACTCTTaGAGTTGTCCACCAGGCAGCGGGTATCAGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PCHNPGAAATDS*SCPPGSGYQGG Trigger: TCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | TCACAATCCAGGAGCTGCGGCAACCGACTCTTGGAGTaGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SQSRSCGNRLLE*STRQRVSGRRV Trigger: CACTCTCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | ACCTTGTCACAATCCAGGAGCTGCGGCAACCGACTCTaGGAGTTGTCCACCAGGCAGCGGGTATCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLSQSRSCGNRL*ELSTRQRVSGR Trigger: CCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 90 bp | CGCTTTCCAGCCCTCGATGCGTGCTCGGATCAGGCCTTCTCGCTTTaGATTGCGTACCACCTTCACCAGCCCAGGGTAGCGTTTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RFPALDACSDQAFSL*IAYHLHQPRVAFVD Trigger: GTCCACAAACGCTACCCTGGGCTGGTGAAGGTGGTACGCAATCAAAAGCGAGAAGGCCTGATCCGAGCACGCATCGAGGGCTGGAAAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CAA 90 bp | CTGCTCTTGACCTTGTCACAATCCAGGAGCTGCGGCAACCGACTCTaGGAGTTGTCCACCAGGCAGCGGGTATCAGGGAGGAGAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLLTLSQSRSCGNRL*ELSTRQRVSGRRVV Trigger: CACCACTCTCCTCCCTGATACCCGCTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS GCA 72 bp | CGATGCGTGCTCGGATCAGGCCTTCTCGCTTTTGATTaGGTACCACCTTCACCAGCCCAGGGTAGCGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RCVLGSGLLAFD*VPPSPAQGSVC Trigger: ACAAACGCTACCCTGGGCTGGTGAAGGTGGTACGCAATCAAAAGCGAGAAGGCCTGATCCGAGCACGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS GCA 72 bp | TACAAGCTGCTCTTGACCTTGTCACAATCCAGGAGCTaGGGCAACCGACTCTTGGAGTTGTCCACCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: YKLLLTLSQSRS*GNRLLELSTRQ Trigger: CTGCCTGGTGGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | GTGGCATGGGTACAGTATTGCTGTGTGGTTTTCCAGTaGCCCCTGGTCCAGACAGACGTCCTTGGCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: VAWVQYCCVVFQ*PLVQTDVLGLI Trigger: AATAAGGCCAAGGACGTCTGTCTGGACCAGGGGCCACTGGAAAACCACACAGCAATACTGTACCCATGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 90 bp | CCATTCTGGATGAAGTTCCAACGCTTGTACAAGCTGCTCTTGACCTaGTCACAATCCAGGAGCTGCGGCAACCGACTCTTGGAGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PFWMKFQRLYKLLLT*SQSRSCGNRLLELS Trigger: GGACAACTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCATCCAGAATGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 90 bp | ATGGCTCCATTCTGGATGAAGTTCCAACGCTTGTACAAGCTGCTCTaGACCTTGTCACAATCCAGGAGCTGCGGCAACCGACTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MAPFWMKFQRLYKLL*TLSQSRSCGNRLLE Trigger: CTCCAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCATCCAGAATGGAGCCAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS TCA 72 bp | ATTCTCCAGAGGCAGATTCCACGCTATGTACACATGTaGCTTGTAGTCGTCCATCCAGACCTCGGCTACTCG | + |
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Preference number: 6 (lower is better) Translates to: ILQRQIPRYVHM*LVVVHPDLGYS Trigger: CGAGTAGCCGAGGTCTGGATGGACGACTACAAGTCACATGTGTACATAGCGTGGAATCTGCCTCTGGAGAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | GGGTACAGTATTGCTGTGTGGTTTTCCAGTGGCCCCTaGTCCAGACAGACGTCCTTGGCCTTATTATTACGA | + |
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Preference number: 6 (lower is better) Translates to: GYSIAVWFSSGP*SRQTSLALLLR Trigger: TCGTAATAATAAGGCCAAGGACGTCTGTCTGGACCAGGGGCCACTGGAAAACCACACAGCAATACTGTACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | ATGAAGTTCCAACGCTTGTACAAGCTGCTCTTGACCTaGTCACAATCCAGGAGCTGCGGCAACCGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: MKFQRLYKLLLT*SQSRSCGNRLL Trigger: CAAGAGTCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | TTCTGGATGAAGTTCCAACGCTTGTACAAGCTGCTCTaGACCTTGTCACAATCCAGGAGCTGCGGCAACCGA | + |
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Preference number: 6 (lower is better) Translates to: FWMKFQRLYKLL*TLSQSRSCGNR Trigger: TCGGTTGCCGCAGCTCCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCATCCAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CCA 72 bp | CCATCCAGACCTCGGCTACTCGCAATGCATTCCTCTTaGTGTAAAAGCCGATGTTACTGTTATACGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSRPRLLAMHSS*CKSRCYCYTVS Trigger: AGAAACCGTATAACAGTAACATCGGCTTTTACACCAAGAGGAATGCATTGCGAGTAGCCGAGGTCTGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS CAA 72 bp | TTCATGATGGCTCCATTCTGGATGAAGTTCCAACGCTaGTACAAGCTGCTCTTGACCTTGTCACAATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FMMAPFWMKFQR*YKLLLTLSQSR Trigger: CCTGGATTGTGACAAGGTCAAGAGCAGCTTGTACAAGCGTTGGAACTTCATCCAGAATGGAGCCATCATGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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| CDS TCA 72 bp | ACCAATTTCACCAAAGAATTTCCTGTTGACCACAAATaGGCAGCCAATCATGGCTGGTGTTCTGATGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TNFTKEFPVDHK*AANHGWCSDGE Trigger: CTCCCCATCAGAACACCAGCCATGATTGGCTGCTCATTTGTGGTCAACAGGAAATTCTTTGGTGAAATTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086023.13 ENSMUST00000160609.2 |
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| CDS CAA 72 bp | CATAAATCAGGAGGTAGAGACGCCATGTTACCAACCTaGATCCCAAGTTCAATATTCTCTCCTCCGTACACA | + |
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Preference number: 6 (lower is better) Translates to: HKSGGRDAMLPT*IPSSIFSPPYT Trigger: TGTGTACGGAGGAGAGAATATTGAACTTGGGATCAAGGTTGGTAACATGGCGTCTCTACCTCCTGATTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160609.2 |
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| CDS CCA 72 bp | CCCATAGGCGATAGTGTTGTTGTATCTTCTCATTTCTaGGTAAACATGGTCCAAATACCACTGGAAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: PIGDSVVVSSHF*VNMVQIPLEIL Trigger: AAGAATTTCCAGTGGTATTTGGACCATGTTTACCCAGAAATGAGAAGATACAACAACACTATCGCCTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086023.13 |
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