RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GALNT16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021130

Ensembl transcript IDs: ENSMUST00000021558.8, ENSMUST00000217926.2, ENSMUST00000218943.2, ENSMUST00000219267.2, ENSMUST00000219993.2

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGGCAAGACTTGGGTGGCACAGAGGGCATGAAGCATGCCCCTaGACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGGTAGGGGTG +
Preference number: 1 (lower is better)
Translates to: PRARLGWHRGHEACP*TLPELALEKCVVGV
Trigger: CACCCCTACCACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCCTCTGTGCCACCCAAGTCTTGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 90 bp AGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCAGGACAGCTaGATACTAACCATCTCCTCTCCCAGGGCAAGACTTGGGTGGCAC +
Preference number: 1 (lower is better)
Translates to: RQRARSSCQVSAQDS*ILTISSPRARLGWH
Trigger: GTGCCACCCAAGTCTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 90 bp AGGGGTGCAGACGTATTTGGCACAGAACAGCTGAGAGGATGCTGGTaGGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGT +
Preference number: 1 (lower is better)
Translates to: RGADVFGTEQLRGCW*EPEVQGNCWSTRQS
Trigger: ACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACCAGCATCCTCTCAGCTGTTCTGTGCCAAATACGTCTGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 90 bp GACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGACTTGGGTaGCACAGAGGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTA +
Preference number: 1 (lower is better)
Translates to: DSCILTISSPRARLG*HRGHEACPCTLPEL
Trigger: TAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCCTCTGTGCCACCCAAGTCTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 90 bp GCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCTCTAGCTaGCTTGCTTTCAGCCTCTTCACACACGATGCCACCTGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: AHPVAGASQPFLFSS*LAFSLFTHDATCPL
Trigger: AAGAGGACAGGTGGCATCGTGTGTGAAGAGGCTGAAAGCAAGGCAGCTAGAGAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 90 bp AACTGCTGGAGTACCCGCCAGAGTGGGCACTACAAACCCAGGACTTaGTTTCTAACACCTGGTGATGTACAGGCTGGGCCCAGCAGAGAG +
Preference number: 1 (lower is better)
Translates to: NCWSTRQSGHYKPRT*FLTPGDVQAGPSRE
Trigger: CTCTCTGCTGGGCCCAGCCTGTACATCACCAGGTGTTAGAAACCAAGTCCTGGGTTTGTAGTGCCCACTCTGGCGGGTACTCCAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 90 bp AGATCCCTCTCCAGTTTCTTGCTAAGACTGTGGTCACCTAGGGGCTaGAGACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: RSLSSFLLRLWSPRG*RHMLGLGPGAGKAA
Trigger: TGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACCACAGTCTTAGCAAGAAACTGGAGAGGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 90 bp CCTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTGAATaGTTTCCTGTGTACAGAGCAAGGGGAAAGGCAGGTCTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: PQHKDTAPRKTIMPE*FPVYRARGKAGLRG
Trigger: CCCCCTCAGACCTGCCTTTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR TCA 90 bp CTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGTCCTaGAAAGAGACCTTGGTTTTCTGGCACTTCACAGTTGGCTGCTTC +
Preference number: 1 (lower is better)
Translates to: LGTWGWQSSNRVMMS*KETLVFWHFTVGCF
Trigger: GAAGCAGCCAACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 90 bp GTATCCTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTaGATGCTTTCCTGTGTACAGAGCAAGGGGAAAGGCAGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: VSSAQRHSSQEDHHA*MLSCVQSKGKGRSE
Trigger: CTCAGACCTGCCTTTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR CCA 90 bp AATAAATTATACCCCAGATCCCTCTCCAGTTTCTTGCTAAGACTGTaGTCACCTAGGGGCTGCAGACATATGTTGGGCTTGGGACCTGGG +
Preference number: 1 (lower is better)
Translates to: NKLYPRSLSSFLLRL*SPRGCRHMLGLGPG
Trigger: CCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACCACAGTCTTAGCAAGAAACTGGAGAGGGATCTGGGGTATAATTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 90 bp GATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTTaGCTGCTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTG +
Preference number: 1 (lower is better)
Translates to: DDVLKRDLGFLALHS*LLLYPRSSVNLHPL
Trigger: CAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAGCAGCCAACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 90 bp ATCCAAGCTAGTTCTTATTTGAGCTTTGTAGTTGTCATCAAAGGTTaGACGAGCAGCGTTAGCAAGACAAATGGTTCCTGCCCCCAGACT +
Preference number: 1 (lower is better)
Translates to: IQASSYLSFVVVIKG*TSSVSKTNGSCPQT
Trigger: AGTCTGGGGGCAGGAACCATTTGTCTTGCTAACGCTGCTCGTCCAACCTTTGATGACAACTACAAAGCTCAAATAAGAACTAGCTTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
3UTR GCA 90 bp ACCACGAAGCAGGGAAAATCCAGGCTCAACCCCCACCTATGTAATTaGACATGTACATACACATGCAATTTACTAGAGATTTCTCAACCT +
Preference number: 1 (lower is better)
Translates to: TTKQGKSRLNPHLCN*TCTYTCNLLEISQP
Trigger: AGGTTGAGAAATCTCTAGTAAATTGCATGTGTATGTACATGTGCAATTACATAGGTGGGGGTTGAGCCTGGATTTTCCCTGCTTCGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACACCCCAAAGTCCACGTTaGGACAGGGCCCAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTPQSPR*DRAQAS
Trigger: AGAGGCTTGGGCCCTGTCCCAACGTGGACTTTGGGG...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCGTGGCACAGAGGGCATaGAGCATGCCCCTGCACCCT +
Preference number: 2 (lower is better)
Translates to: LHPSLAHPVAGASQPFLFVAQRA*SMPLHP
Trigger: AGGGTGCAGGGGCATGCTTCATGCCCTCTGTGCCAC...GAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCTTGGGACCTGGGGCTaGCAAAGCAGCAACAGGGTG +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPLGTWG*QSSNRV
Trigger: CACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAG...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACACAGCTGCCAAGTCTCTaGCCAGGACAGCTGCATACT +
Preference number: 2 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTQLPSL*PGQLHT
Trigger: AGTATGCAGCTGTCCTGGGCAGAGACTTGGCAGCTG...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGTGAGAGCCAGAGGTaGAGGGAAACTGCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTGESQR*RETAGV
Trigger: TACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTGATCCGGTCGAAATGTaGGGAGATGGGAAACAGCCC +
Preference number: 2 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPDPVEM*GDGKQP
Trigger: GGGCTGTTTCCCATCTCCTCACATTTCGACCGGATC...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTTGGCACAGAACAGCTaGGAGGATGCTGGTGAGAGC +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPLAQNS*EDAGES
Trigger: GCTCTCACCAGCATCCTCTCAGCTGTTCTGTGCCAA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGAGAGGGCATGAAGCATaGCCCTGCACCCTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: EPGLTTGNGERPPSRLSERGHEA*PCTLPE
Trigger: TTCAGGCAGGGTGCAGGGGCATGCTTCATGCCCTCT...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCAGTCCCCAAGTCTCATaGAGAAGGTACAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPSPQVS*RRYRRL
Trigger: CAGCCTCCTGTACCTTCTGCATGAGACTTGGGGACT...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCAAGACTGGGTGCTCCTaGGATAGGACTGGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPKTGCS*DRTGLL
Trigger: AAGAAGGCCAGTCCTATCCCAGGAGCACCCAGTCTT...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGAGAGGGCATGAAGCATaGCCCTGCACCCTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLRGHEA*PCTLPE
Trigger: TTCAGGCAGGGTGCAGGGGCATGCTTCATGCCCTCT...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTCTGCCCAGGACAGCTaGATACTAACCATCTCCTCT +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPSAQDS*ILTISS
Trigger: AGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGCCACACATCACTGTCTaGAGCCCAAAAAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEPHITV*SPKRAK
Trigger: CTTGGCCCTTTTTGGGCTCCAGACAGTGATGTGTGG...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGGATCCGGTCGAAATGTaGGGAGATGGGAAACAGCCC +
Preference number: 2 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLDPVEM*GDGKQP
Trigger: GGGCTGTTTCCCATCTCCTCACATTTCGACCGGATC...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTCCTCTTCACACACGATaGCACCTGTCCTCTTGTGTT +
Preference number: 2 (lower is better)
Translates to: GESQRCRETAGVPARVGTPLHTR*HLSSCV
Trigger: AACACAAGAGGACAGGTGGCATCGTGTGTGAAGAGG...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTGGGAAACAGCCCGCTTaGCACTCCCCCACCCTAACC +
Preference number: 2 (lower is better)
Translates to: LQERGPILTSHLAPQCNVGKQPA*HSPTLT
Trigger: GGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCC...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCTTCTCAAGTGTGTTaGTTCCCTGTGAATATCTGG +
Preference number: 2 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPPSQVC*FPVNIW
Trigger: CCAGATATTCACAGGGAATCAACACACTTGAGAAGG...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp GGGCTCGTTGAGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGATCTGCTGGGCCTAGATaGTGCCAGAGGCTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: GLVENYLTRQLEEEAAKGSAGPR*CQRLLR
Trigger: TCTGAGGAGCCTCTGGCATCATCTAGGCCCAGCAGA...TCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCTCAACGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
3UTR-3UTR GCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCATGAAGCATGCCCCTaGACCCTGCCTGAACTAGCT +
Preference number: 2 (lower is better)
Translates to: KKGQGRRQRARSSCQVSAHEACP*TLPELA
Trigger: AGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATG...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACATACAAACCCAGGACTTaGTTTCTAACACCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTYKPRT*FLTPGD
Trigger: ATCACCAGGTGTTAGAAACCAAGTCCTGGGTTTGTA...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 90 bp ACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCTCTAGCTGCCTaGCTTTCAGCCTCTTCACACACGATGCCACCTGTCCTCTTGTGT +
Preference number: 2 (lower is better)
Translates to: TQWPELLNPSSSLAA*LSASSHTMPPVLLC
Trigger: ACACAAGAGGACAGGTGGCATCGTGTGTGAAGAGGCTGAAAGCAAGGCAGCTAGAGAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTCTGAGAGGATGCTGGTaGGAGCCAGAGGTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVLRGCW*EPEVQG
Trigger: TCCCTGCACCTCTGGCTCTCACCAGCATCCTCTCAG...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp CAGCTGCCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGAGTCCCCAAGTCTCATaGAGAAGGTACAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QLPSLCPGQLHTNHLLSQSPQVS*RRYRRL
Trigger: CAGCCTCCTGTACCTTCTGCATGAGACTTGGGGACT...CTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATCCTCTGCTCCCAGGCTaGATCCCTCCCTCGCTCACC +
Preference number: 2 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENPLLPG*IPPSLT
Trigger: GGTGAGCGAGGGAGGGATGCAGCCTGGGAGCAGAGG...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCGAAATGTGAGGAGATaGGAAACAGCCCGCTTGACA +
Preference number: 2 (lower is better)
Translates to: KKGQGRRQRARSSCQVSARNVRR*ETARLT
Trigger: TGTCAAGCGGGCTGTTTCCCATCTCCTCACATTTCG...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTGGGAAACAGCCCGCTTaGCACTCCCCCACCCTAACC +
Preference number: 2 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSGKQPA*HSPTLT
Trigger: GGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCC...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp CAGCTGCCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGCTAGCTTTGGAGAAATaGGTGGTAGGGGTGTGTACT +
Preference number: 2 (lower is better)
Translates to: QLPSLCPGQLHTNHLLSQLALEK*VVGVCT
Trigger: AGTACACACCCCTACCACGCATTTCTCCAAAGCTAG...CTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGTCTGCCCAGGACAGCTaGATACTAACCATCTCCTCT +
Preference number: 2 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMSAQDS*ILTISS
Trigger: AGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGA...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp ATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGGGACAGGGCACCCACTACAACCACTaGCCTTTGGTGAAGGGATTT +
Preference number: 2 (lower is better)
Translates to: IHREKPRFLAPKSTLGQGTHYNH*PLVKGF
Trigger: AAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGT...GCCCTGTCCCAACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGCCCCAATGCTGTCCTaGACTTTGGCAGGACTCTTC +
Preference number: 2 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVAPMLS*TLAGLF
Trigger: GAAGAGTCCTGCCAAAGTCCAGGACAGCATTGGGGC...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp ATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGGGACAGGGCCCTGAAAAGAGACCTTaGTTTTCTGGCACTTCACAG +
Preference number: 2 (lower is better)
Translates to: IHREKPRFLAPKSTLGQGPEKRP*FSGTSQ
Trigger: CTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGG...GCCCTGTCCCAACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp ATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGGGACAGGGCCAGAGGCAAAGAACCTaGAAAAGTAGGAGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: IHREKPRFLAPKSTLGQGQRQRT*KSRSPK
Trigger: TTTTGGACTCCTACTTTTTCAGGTTCTTTGCCTCTG...GCCCTGTCCCAACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATAGGTGAGAGCCAGAGGTaGAGGGAAACTGCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SQRVTGSKARSVNSSVYIGESQR*RETAGV
Trigger: TACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGAGACCTTGGTTTTCTaGCACTTCACAGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVETLVF*HFTVGC
Trigger: GCAGCCAACTGTGAAGTGCCAGAAAACCAAGGTCTC...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp GCTCTTCGGGGGCTGGGACTCCACAAAATGAATGGCTGTGAGGTACATAACATCGAAGACCATCATGCCTaGATGCTTTCCTGTGTACAG +
Preference number: 2 (lower is better)
Translates to: ALRGLGLHKMNGCEVHNIEDHHA*MLSCVQ
Trigger: CTGTACACAGGAAAGCATTCAGGCATGATGGTCTTC...GATGTTATGTACCTCACAGCCATTCATTTTGTGGAGTCCCAGCCCCCGAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR-3UTR CCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATACCACACATCACTGTCTaGAGCCCAAAAAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: SQRVTGSKARSVNSSVYIPHITV*SPKRAK
Trigger: CTTGGCCCTTTTTGGGCTCCAGACAGTGATGTGTGG...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 90 bp GGCCTTCTTAGGCAGACTTGCTTTGGGATAGAGACCCCAAGAATTTaGGGCTCTTTTACCCAAGAGCCATTGTGTAAGCCAATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GLLRQTCFGIETPRI*GSFTQEPLCKPMVR
Trigger: CCTCACCATTGGCTTACACAATGGCTCTTGGGTAAAAGAGCCCAAAATTCTTGGGGTCTCTATCCCAAAGCAAGTCTGCCTAAGAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCCACCTTGCCCCACAATaGAATGTTTACAGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LASFETHYNHWPLVKGFSHLAPQ*NVYRGK
Trigger: TTTGCCTCTGTAAACATTGCATTGTGGGGCAAGGTG...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATACGAAATGTGAGGAGATaGGAAACAGCCCGCTTGACA +
Preference number: 2 (lower is better)
Translates to: SQRVTGSKARSVNSSVYIRNVRR*ETARLT
Trigger: TGTCAAGCGGGCTGTTTCCCATCTCCTCACATTTCG...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR TCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATTGTGTAAGCCAATGGTaGGGAAAAGGACGGGATTCC +
Preference number: 2 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENCVSQW*GKGRDS
Trigger: GGAATCCCGTCCTTTTCCTCACCATTGGCTTACACA...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp AGTCCTCATGGTGGTTCTTCCATTGTCCCAGGGAGTATCCTCAGCACAAAGACAACCATCATGCCTGAATaGTTTCCTGTGTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: SPHGGSSIVPGSILSTKTTIMPE*FPVYRA
Trigger: TGCTCTGTACACAGGAAAGCATTCAGGCATGATGGT...TGTCTTTGTGCTGAGGATACTCCCTGGGACAATGGAAGAACCACCATGAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR-3UTR GCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATCTAGCTTTGGAGAAATaGGTGGTAGGGGTGTGTACT +
Preference number: 2 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENLALEK*VVGVCT
Trigger: AGTACACACCCCTACCACGCATTTCTCCAAAGCTAG...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATACCCACTACAACCACTaGCCTTTGGTGAAGGGATTT +
Preference number: 2 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENTHYNH*PLVKGF
Trigger: AAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGT...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 90 bp ATACACATGCAATTTACTAGAGATTTCTCAACCTTCTCAAGTGTGTaGATTCCCTGTGAATATCTGGCTGCCTGGTTTATGAAAGACTGG +
Preference number: 2 (lower is better)
Translates to: IHMQFTRDFSTFSSV*IPCEYLAAWFMKDW
Trigger: CCAGTCTTTCATAAACCAGGCAGCCAGATATTCACAGGGAATCAACACACTTGAGAAGGTTGAGAAATCTCTAGTAAATTGCATGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR GCA 90 bp TCCTTAAGTGATTTACTCTTAGATTGCATAGCAACAGGCTTTACTAGATGGAAATCAGAGAGTAGTCTTTaGTCTTCCAAAGTAGTAGTC +
Preference number: 2 (lower is better)
Translates to: SLSDLLLDCIATGFTRWKSESSL*SSKVVV
Trigger: GACTACTACTTTGGAAGAGCAAAGACTACTCTCTGA...TTTCCATCTAGTAAAGCCTGTTGCTATGCAATCTAAGAGTAAATCACTTAAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR TCA 72 bp TGGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTaGGCCGGGTCTGACCACAGGAAATGGGGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: WTESPHGTAAKC*AGSDHRKWGEA
Trigger: GGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp CTGCTCCCAGGCTGCATCCCTCCCTCGCTCACCCAGTaGCCGGAGCTTCTCAACCCTTCCTCTTCTCTAGCT +
Preference number: 3 (lower is better)
Translates to: LLPGCIPPSLTQ*PELLNPSSSLA
Trigger: AGCTAGAGAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTGGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCATGCTGTCCTGGACTTaGGCAGGACTCTTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPMLSWT*AGLFPE
Trigger: CTCTGGGAAGAGTCCTGCCAAAGTCCAGGACAGCAT...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTAGACATATGTTGGGCTaGGGACCTGGGGCTGGCAAA +
Preference number: 3 (lower is better)
Translates to: GESQRCRETAGVPARVGTRHMLG*GPGAGK
Trigger: TTTGCCAGCCCCAGGTCCCAAGCCCAACATATGTCT...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGAGACATATGTTGGGCTaGGGACCTGGGGCTGGCAAA +
Preference number: 3 (lower is better)
Translates to: EPGLTTGNGERPPSRLSERHMLG*GPGAGK
Trigger: TTTGCCAGCCCCAGGTCCCAAGCCCAACATATGTCT...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGTGGGAAACAGCCCGCTaGACACTCCCCCACCCTAAC +
Preference number: 3 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKWETAR*TLPHPN
Trigger: GTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCA...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCTCCCAGGGCAAGACTaGGGTGGCACAGAGGGCATG +
Preference number: 3 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMLPGQD*GGTEGM
Trigger: CATGCCCTCTGTGCCACCCAAGTCTTGCCCTGGGAG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCGAGACCCCAAGAATTTaGGGCTCTTTTACCCAAGAG +
Preference number: 3 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPETPRI*GSFTQE
Trigger: CTCTTGGGTAAAAGAGCCCAAAATTCTTGGGGTCTC...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp ATACTAACCATCTCCTCTCCCAGGGCAAGACTTGGGTaGCACAGAGGGCATGAAGCATGCCCCTGCACCCTG +
Preference number: 3 (lower is better)
Translates to: ILTISSPRARLG*HRGHEACPCTL
Trigger: CAGGGTGCAGGGGCATGCTTCATGCCCTCTGTGCCACCCAAGTCTTGCCCTGGGAGAGGAGATGGTTAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp TGTGGTCACCTAGGGGCTGCAGACATATGTTGGGCTTaGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGAT +
Preference number: 3 (lower is better)
Translates to: CGHLGAADICWA*DLGLAKQQQGD
Trigger: ATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 72 bp TCCAGTTTCTTGCTAAGACTGTGGTCACCTAGGGGCTaGAGACATATGTTGGGCTTGGGACCTGGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SSFLLRLWSPRG*RHMLGLGPGAG
Trigger: GCCAGCCCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACCACAGTCTTAGCAAGAAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp AGTACCCGCCAGAGTGGGCACTACAAACCCAGGACTTaGTTTCTAACACCTGGTGATGTACAGGCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: STRQSGHYKPRT*FLTPGDVQAGP
Trigger: GGGCCCAGCCTGTACATCACCAGGTGTTAGAAACCAAGTCCTGGGTTTGTAGTGCCCACTCTGGCGGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTTGGGAAACAGCCCGCTaGACACTCCCCCACCCTAAC +
Preference number: 3 (lower is better)
Translates to: LQERGPILTSHLAPQCNVWETAR*TLPHPN
Trigger: GTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCA...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 72 bp GACGTATTTGGCACAGAACAGCTGAGAGGATGCTGGTaGGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACC +
Preference number: 3 (lower is better)
Translates to: DVFGTEQLRGCW*EPEVQGNCWST
Trigger: GGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACCAGCATCCTCTCAGCTGTTCTGTGCCAAATACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 72 bp GAAGCCATGGCTCACTCACTGGACAATAGGGCTCGTTaGGAACTATCTTACCAGGCAGCTGGAGGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: EAMAHSLDNRAR*ELSYQAAGGGG
Trigger: GCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCTCAACGAGCCCTATTGTCCAGTGAGTGAGCCATGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
3UTR GCA 72 bp TGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATaGGTGGTAGGGGTGTGTACTGATGATCCGGTCGAA +
Preference number: 3 (lower is better)
Translates to: CPCTLPELALEK*VVGVCTDDPVE
Trigger: TTCGACCGGATCATCAGTACACACCCCTACCACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 72 bp TTCACAGTTGGCTGCTTCTCTATCCACGTTCTTCTGTaGATCTCCATCCTCTGCTCCCAGGCTGCATCCCTC +
Preference number: 3 (lower is better)
Translates to: FTVGCFSIHVLL*ISILCSQAASL
Trigger: GAGGGATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAGCAGCCAACTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 72 bp GCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTaGATGCTTTCCTGTGTACAGAGCAAGGGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: AQRHSSQEDHHA*MLSCVQSKGKG
Trigger: GCCTTTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR-3UTR CAA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCCTGCCTGAACTAGCTTaGGAGAAATGCGTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCILPELA*EKCVVG
Trigger: CCCTACCACGCATTTCTCCAAAGCTAGTTCAGGCAG...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCTCTTCTCTAGCTGCCTaGCTTTCAGCCTCTTCACAC +
Preference number: 3 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCISSLAA*LSASSH
Trigger: GTGTGAAGAGGCTGAAAGCAAGGCAGCTAGAGAAGA...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTTCCCTCTCCAGTTTCTaGCTAAGACTGTGGTCACCT +
Preference number: 3 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVSLSSF*LRLWSP
Trigger: AGGTGACCACAGTCTTAGCAAGAAACTGGAGAGGGA...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 72 bp TGCTCCTGGGATAGGACTGGCCTTCTTAGGCAGACTTaGTTTGGGATAGAGACCCCAAGAATTTTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: CSWDRTGLLRQT*FGIETPRILGS
Trigger: AGAGCCCAAAATTCTTGGGGTCTCTATCCCAAAGCAAGTCTGCCTAAGAAGGCCAGTCCTATCCCAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 72 bp AAAGACACAGCTCCCAGGAAGACCATCATGCCTGAATaGTTTCCTGTGTACAGAGCAAGGGGAAAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: KDTAPRKTIMPE*FPVYRARGKAG
Trigger: ACCTGCCTTTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR GCA 72 bp CTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATaGCTGAATGCTTTCCTGTGTACAGAGCAAGGGGAA +
Preference number: 3 (lower is better)
Translates to: LSTKTQLPGRPS*LNAFLCTEQGE
Trigger: TTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR CCA 72 bp GACCAGTTAGTGGGGACACGCCCAAGTGTGAGGTCTTaGCGTGACATATGGCTAAGCGGAAGTGGAAATTAT +
Preference number: 3 (lower is better)
Translates to: DQLVGTRPSVRS*RDIWLSGSGNY
Trigger: ATAATTTCCACTTCCGCTTAGCCATATGTCACGCCAAGACCTCACACTTGGGCGTGTCCCCACTAACTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR TCA 72 bp TGGGGCTGGCAAAGCAGCAACAGGGTGATGATGTCCTaGAAAGAGACCTTGGTTTTCTGGCACTTCACAGTT +
Preference number: 3 (lower is better)
Translates to: WGWQSSNRVMMS*KETLVFWHFTV
Trigger: AACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTGCTGCTTTGCCAGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR-3UTR CAA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTCTGCCTGAACTAGCTTaGGAGAAATGCGTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSLPELA*EKCVVG
Trigger: CCCTACCACGCATTTCTCCAAAGCTAGTTCAGGCAG...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 72 bp GGTTGGACGAGCAGCGTTAGCAAGACAAATGGTTCCTaGCCCCAGACTGGCAGAACTAATGTTAAACAAACA +
Preference number: 3 (lower is better)
Translates to: GWTSSVSKTNGS*PQTGRTNVKQT
Trigger: TGTTTGTTTAACATTAGTTCTGCCAGTCTGGGGGCAGGAACCATTTGTCTTGCTAACGCTGCTCGTCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
3UTR-3UTR CAA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATTCCCTCTCCAGTTTCTaGCTAAGACTGTGGTCACCT +
Preference number: 3 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENSLSSF*LRLWSP
Trigger: AGGTGACCACAGTCTTAGCAAGAAACTGGAGAGGGA...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp CTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTTaGCTGCTTCTCTATCCACGTTCTTCTGTGAATCTC +
Preference number: 3 (lower is better)
Translates to: LKRDLGFLALHS*LLLYPRSSVNL
Trigger: GAGATTCACAGAAGAACGTGGATAGAGAAGCAGCCAACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR GCA 72 bp CAGGGAAAATCCAGGCTCAACCCCCACCTATGTAATTaGACATGTACATACACATGCAATTTACTAGAGATT +
Preference number: 3 (lower is better)
Translates to: QGKSRLNPHLCN*TCTYTCNLLEI
Trigger: AATCTCTAGTAAATTGCATGTGTATGTACATGTGCAATTACATAGGTGGGGGTTGAGCCTGGATTTTCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CCA 72 bp TTACTCTTAGATTGCATAGCAACAGGCTTTACTAGATaGAAAAGACACGGTTTTAATCTCAAAGCTCTTCGG +
Preference number: 3 (lower is better)
Translates to: LLLDCIATGFTR*KRHGFNLKALR
Trigger: CCGAAGAGCTTTGAGATTAAAACCGTGTCTTTTCCATCTAGTAAAGCCTGTTGCTATGCAATCTAAGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGCGCGCCGCGGCCGCTaGAGGATGCTGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTARRGR*RMLHGL
Trigger: GAGCCCATGCAGCATCCTCCAGCGGCCGCGGCGCGC...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGCGCGCCGCGGCCGCTaGAGGATGCTGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSARRGR*RMLHGL
Trigger: GAGCCCATGCAGCATCCTCCAGCGGCCGCGGCGCGC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAAGGGATGCCGCTTCCTaGAGACATGGCCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTRDAAS*RHGPLG
Trigger: GCCGAGTGGGCCATGTCTTCAGGAAGCGGCATCCCT...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTCGCGGAGCTGCTCTaGTCTCCCGCCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLAELL*SPAGPL
Trigger: CAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGGCTCCTGCCACATCTaGCCCACGAACCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSGSCHI*PTNPGP
Trigger: CGGTCCCGGGTTCGTGGGGCAGATGTGGCAGGAGCC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTGTGTGTGGCAGCAGCTaGCATTGCTGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPVCGSS*HCWAWA
Trigger: TGCCCAGGCCCAGCAATGGCAGCTGCTGCCACACAC...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGGCCGCTGGAGGATGCTaGATGGGCTCGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEAAGGC*MGSVVL
Trigger: CAGGACAACCGAGCCCATGCAGCATCCTCCAGCGGC...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCGGACGCTCTTCACTGTaGGCAGGAGTGTGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPGRSSL*AGVWSE
Trigger: CTCGCTCCACACTCCTGCGCACAGTGAAGAGCGTCC...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCTCGCGGAGCTGCTCTaGTCTCCCGCCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSALAELL*SPAGPL
Trigger: CAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAG...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGTGTTCCTGTCACAATaGGCGGAATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTVFLSQ*AEWCGP
Trigger: AGGACCGCACCATTCCGCTCATTGTGACAGGAACAC...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAGGGATGCCGCTTCCTaGAGACATGGCCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRDAAS*RHGPLG
Trigger: GCCGAGTGGGCCATGTCTTCAGGAAGCGGCATCCCT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGGCCTTCCCGATGGCTaGGGGCCGGGCCTCATAATA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSGLPDG*GPGLII
Trigger: TATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGCCGCTGGAGGATGCTaGATGGGCTCGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSAAGGC*MGSVVL
Trigger: CAGGACAACCGAGCCCATGCAGCATCCTCCAGCGGC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTTCTCCAGGCTTCAGCTaGTTGGCTGACAGGTACGCC +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPSPGFS*LADRYA
Trigger: GGCGTACCTGTCAGCCAAGCAGCTGAAGCCTGGAGA...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTGAGAACTGTGGCTCCTaGCACATCTGCCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPENCGS*HICPTN
Trigger: GTTCGTGGGGCAGATGTGGCAGGAGCCACAGTTCTC...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCCGCGTGGCCACACTaGCAAAGGCCTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSAWPH*QRPSRW
Trigger: CCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGTGTGTGGCAGCAGCTaGCATTGCTGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSVCGSS*HCWAWA
Trigger: TGCCCAGGCCCAGCAATGGCAGCTGCTGCCACACAC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCAAAGGCCTTCCCGATaGCTGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSQRPSR*LRAGPH
Trigger: ATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCTTCAGCTGCTTGGCTaGCAGGTACGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPLQLLG*QVRLLI
Trigger: GATGAGAAGGCGTACCTGTCAGCCAAGCAGCTGAAG...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAATGGCGGGTGTCCCTaGTGGGTCGGTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSNGGCP*WVGLSS
Trigger: TGAGCTCAGACCGACCCATCAGGGACACCCGCCATT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGGGCCTTCCCGATGGCTaGGGGCCGGGCCTCATAATA +
Preference number: 4 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLGLPDG*GPGLII
Trigger: TATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCC...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTTGGTGGGCTCTTGGCTaGCCCTCTGCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GESQRCRETAGVPARVGTWWALG*PSAYPH
Trigger: ATGGGGATATGCAGAGGGTCAGCCAAGAGCCCACCA...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCGCAGAGGCCGCTGACTaGATGCTGGATGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPAEAAD*MLDERS
Trigger: GGATCTTTCATCCAGCATTCAGTCAGCGGCCTCTGC...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGGACGCTCTTCACTGTaGGCAGGAGTGTGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSGRSSL*AGVWSE
Trigger: CTCGCTCCACACTCCTGCGCACAGTGAAGAGCGTCC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCCTCCATCACCCGCTaGAGCATTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSSITR*SIGCSH
Trigger: GTGGCTGCAGCCAATGCTGCAGCGGGTGATGGAGGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGTCCGGGTCATCTTCTaGTCCAGCGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSVRVIF*SSGICS
Trigger: GGAGCAGATCCCGCTGGAGCAGAAGATGACCCGGAC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGCAAAGGCCTTCCCGATaGCTGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLQRPSR*LRAGPH
Trigger: ATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTG...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCTGCTCGATCCGCGTaGCCACACTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSARSA*PHCQRP
Trigger: AGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAACATTAAGGTGGAGGTaGCAGCCAGGCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTTLRWR*QPGISP
Trigger: AGGGGAAATGCCTGGCTGCCACCTCCACCTTAATGT...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGAGGGATGCCGCTTCCTaGAGACATGGCCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKRDAAS*RHGPLG
Trigger: GCCGAGTGGGCCATGTCTTCAGGAAGCGGCATCCCT...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTGGTGGGCTCTTGGCTaGCCCTCTGCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSWWALG*PSAYPH
Trigger: ATGGGGATATGCAGAGGGTCAGCCAAGAGCCCACCA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTACACGTTTGCAGTATaGCTGGGGATCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPYTFAV*LGIQGK
Trigger: CTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCTCCAGGCTTCAGCTaGTTGGCTGACAGGTACGCC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSPGFS*LADRYA
Trigger: GGCGTACCTGTCAGCCAAGCAGCTGAAGCCTGGAGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGAGAACTGTGGCTCCTaGCACATCTGCCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSENCGS*HICPTN
Trigger: GTTCGTGGGGCAGATGTGGCAGGAGCCACAGTTCTC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCGCTGCAGCATTGGCTaGAGCCACTCCACATTCACC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRCSIG*SHSTFT
Trigger: GGTGAATGTGGAGTGGCTGCAGCCAATGCTGCAGCG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCTCCGCGTGGCCACACTaGCAAAGGCCTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSASAWPH*QRPSRW
Trigger: CCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGGA...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACATCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTSPAVF*PWDSKQ
Trigger: CTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGA...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTCTGTCTGACATTTGCTaGTCACCAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GESQRCRETAGVPARVGTLSDIC*SPAGQA
Trigger: AGCCTGCCCAGCTGGTGACCAGCAAATGTCAGACAG...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGTGTTCCTGTCACAATaGGCGGAATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSVFLSQ*AEWCGP
Trigger: AGGACCGCACCATTCCGCTCATTGTGACAGGAACAC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTTCAGCTGCTTGGCTaGCAGGTACGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLQLLG*QVRLLI
Trigger: GATGAGAAGGCGTACCTGTCAGCCAAGCAGCTGAAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCTGATGGGTCGGTCTaGGCTCAGTTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPDGSV*AQFVTL
Trigger: GAGAGTGACAAACTGAGCTCAGACCGACCCATCAGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGAATGGCGGGTGTCCCTaGTGGGTCGGTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GHEACPCTLPELALEKCVNGGCP*WVGLSS
Trigger: TGAGCTCAGACCGACCCATCAGGGACACCCGCCATT...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCATTGCGAAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSHCEGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTGACTATCCAGAAAAGTaGGAACTGTGGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPDYPEK*ELWLLP
Trigger: TGGCAGGAGCCACAGTTCTCACTTTTCTGGATAGTC...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGTACACGTTTGCAGTATaGCTGGGGATCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEYTFAV*LGIQGK
Trigger: CTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTA...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGCAGAGGCCGCTGACTaGATGCTGGATGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSAEAAD*MLDERS
Trigger: GGATCTTTCATCCAGCATTCAGTCAGCGGCCTCTGC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTGGCTCCTGCCACATCTaGCCCACGAACCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: LQERGPILTSHLAPQCNVGSCHI*PTNPGP
Trigger: CGGTCCCGGGTTCGTGGGGCAGATGTGGCAGGAGCC...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCCTCCTCGAAGATCTaGAGATGCTGCAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPSSKI*RCCKVG
Trigger: GCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGGTCCGGGTCATCTTCTaGTCCAGCGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GHEACPCTLPELALEKCVVRVIF*SSGICS
Trigger: GGAGCAGATCCCGCTGGAGCAGAAGATGACCCGGAC...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCGTCCGGGTCATCTTCTaGTCCAGCGGGATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSAVRVIF*SSGICS
Trigger: GGAGCAGATCCCGCTGGAGCAGAAGATGACCCGGAC...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCCATCTTCTTCCTCTaGTCGATCCGCGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSIFFL*SIRVAT
Trigger: TGTGGCCACGCGGATCGAGCAGAGGAAGAAGATGGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTTCTTGGCTGACCCTCTaGATATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPSWLTL*ISPFQA
Trigger: TGCTTGGAATGGGGATATGCAGAGGGTCAGCCAAGA...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGCATCTGTCTGACATTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEHLSDI*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAATGTCAGACAGATG...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: GHEACPCTLPELALEKCVRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCAGGCTTCAGCTGCTTaGCTGACAGGTACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSQASAA*LTGTPS
Trigger: AGAAGGCGTACCTGTCAGCCAAGCAGCTGAAGCCTG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTGTCTGACATTTGCTaGTCACCAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLSDIC*SPAGQA
Trigger: AGCCTGCCCAGCTGGTGACCAGCAAATGTCAGACAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGCTTCAGCTGCTTGGCTaGCAGGTACGCCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLLQLLG*QVRLLI
Trigger: GATGAGAAGGCGTACCTGTCAGCCAAGCAGCTGAAG...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAAGTCATCCACTAAAATaGTCTCCTGGATCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTSHPLK*SPGSSW
Trigger: CCAGCTTGATCCAGGAGATCATTTTAGTGGATGACT...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGTGGTGGGCTCTTGGCTaGCCCTCTGCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKWWALG*PSAYPH
Trigger: ATGGGGATATGCAGAGGGTCAGCCAAGAGCCCACCA...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCC +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPCCWIR*SLNNHA
Trigger: GGCATGGTTATTTAGCGATCACCTTATCCAGCAGCA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTACACGTTTGCAGTATaGCTGGGGATCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSYTFAV*LGIQGK
Trigger: CTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTGCGGCCGCTGGAGGATaGTGCATGGGCTCGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LQERGPILTSHLAPQCNVAAAGG*CMGSVV
Trigger: GACAACCGAGCCCATGCAGCATCCTCCAGCGGCCGC...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGCCCTCCTCGAAGATCTaGAGATGCTGCAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLPSSKI*RCCKVG
Trigger: GCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGG...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTGCTCCAGCGGGATCTaGTCCCACTTGAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSCSSGI*SHLKCR
Trigger: TCTGCATTTCAAGTGGGAGCAGATCCCGCTGGAGCA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGCACAATCTCCAAGCTaGCACCACACATCCATACCC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSAQSPS*HHTSIP
Trigger: GGGTATGGATGTGTGGTGGCAGCTTGGAGATTGTGC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGGCTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTAGGCCGCTGACTGAATaGTGGATGAAAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: QAASLPRSPSGRSFSTLPRPLTE*WMKDPF
Trigger: GAAAGGATCTTTCATCCAGCATTCAGTCAGCGGCCT...AGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCATCTGTCTGACATTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSHLSDI*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAATGTCAGACAGATG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGAGGCTACGGTCAGGATaGCGATGGCATTGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMRLRSG*RWHWRG
Trigger: TCCGCGCCAATGCCATCGCCATCCTGACCGTAGCCT...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACATTGTCACTCTCCAGTTaGTTGAAGGCATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTLSLSS*LKACCL
Trigger: CAGACAACATGCCTTCAACCAACTGGAGAGTGACAA...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCTCCTGGATCAAGCTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAGCTTGATCCAGGAGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTAAATAACCATGCCTaGGCTGGTGGTGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLNNHA*AGGGLL
Trigger: CAAGAGCCCACCACCAGCCCAGGCATGGTTATTTAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCACATTAAGGTGGAGGTaGCAGCCAGGCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSTLRWR*QPGISP
Trigger: AGGGGAAATGCCTGGCTGCCACCTCCACCTTAATGT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGGGAAGACATTAAGGTaGAGGTGGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSGKTLR*RWQPGI
Trigger: AATGCCTGGCTGCCACCTCCACCTTAATGTCTTCCC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCCGTTTGCAGTATGACTaGGGATCCAGGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LHPSLAHPVAGASQPFLFRLQYD*GSRGRH
Trigger: ATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACG...GAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCCACTCTCCAGTTGGTTaGAGGCATGTTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: LHPSLAHPVAGASQPFLFHSPVG*RHVVCM
Trigger: CATACAGACAACATGCCTTCAACCAACTGGAGAGTG...GAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGCCTGATGGGTCGGTCTaGGCTCAGTTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GHEACPCTLPELALEKCVPDGSV*AQFVTL
Trigger: GAGAGTGACAAACTGAGCTCAGACCGACCCATCAGG...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGACTATCCAGAAAAGTaGGAACTGTGGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSDYPEK*ELWLLP
Trigger: TGGCAGGAGCCACAGTTCTCACTTTTCTGGATAGTC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGGATCTGCTCCCACTTaGAATGCAGACTCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSGSAPT*NADSSQ
Trigger: TTGACTGGAGTCTGCATTTCAAGTGGGAGCAGATCC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCGGCCTTCCCGATGGCTaGGGGCCGGGCCTCATAATA +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSGLPDG*GPGLII
Trigger: TATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCC...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCC +
Preference number: 4 (lower is better)
Translates to: EPGLTTGNGERPPSRLSECCWIR*SLNNHA
Trigger: GGCATGGTTATTTAGCGATCACCTTATCCAGCAGCA...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCGCAGAGGCCGCTGACTaGATGCTGGATGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSAAEAAD*MLDERS
Trigger: GGATCTTTCATCCAGCATTCAGTCAGCGGCCTCTGC...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGG +
Preference number: 4 (lower is better)
Translates to: LHPSLAHPVAGASQPFLFISSRK*PGSRLR
Trigger: CCGTAGCCTGGATCCTGGGCACTTTCTACTACTTAT...GAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCGCTGCAGCATTGGCTaGAGCCACTCCACATTCACC +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMRCSIG*SHSTFT
Trigger: GGTGAATGTGGAGTGGCTGCAGCCAATGCTGCAGCG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGCCCTCCTCGAAGATCTaGAGATGCTGCAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKPSSKI*RCCKVG
Trigger: GCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGG...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTGCTCCAGCGGGATCTaGTCCCACTTGAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLCSSGI*SHLKCR
Trigger: TCTGCATTTCAAGTGGGAGCAGATCCCGCTGGAGCA...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGTCCATCCACACCTCTaGCGTTCGCTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSVHPHL*RSLCIP
Trigger: AGGAATACAAAGCGAACGGCAGAGGTGTGGATGGAC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCTTGGCTGACCCTCTaGATATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSWLTL*ISPFQA
Trigger: TGCTTGGAATGGGGATATGCAGAGGGTCAGCCAAGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTTAGGGTTACACGTTTaGAGTATGACTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPLGLHV*SMTGDP
Trigger: TGGATCCCCAGTCATACTGCAAACGTGTAACCCTAA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCGTGTGTGGCAGCAGCTaGCATTGCTGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSVCGSS*HCWAWA
Trigger: TGCCCAGGCCCAGCAATGGCAGCTGCTGCCACACAC...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGGAGTATCCTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTGAATGTGTGTGGCAGCAGCTaGCATTGCTGGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSILSTKTQLPGRPSCLNVCGSS*HCWAWA
Trigger: TGCCCAGGCCCAGCAATGGCAGCTGCTGCCACACAC...ATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAGGATACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR CCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGCAGGCTTCAGCTGCTTaGCTGACAGGTACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKQASAA*LTGTPS
Trigger: AGAAGGCGTACCTGTCAGCCAAGCAGCTGAAGCCTG...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCCCAGATGTCCATCTaGGCATCATACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPQMSI*ASYFPR
Trigger: TCTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCCAAAGGCCTTCCCGATaGCTGAGGGCCGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSQRPSR*LRAGPH
Trigger: ATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTG...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSPAVF*PWDSKQ
Trigger: CTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCGTTTGCAGTATGACTaGGGATCCAGGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRLQYD*GSRGRH
Trigger: ATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCGCTGACTGAATGCTaGATGAAAGATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPPLTEC*MKDPFL
Trigger: AAGGAAAGGATCTTTCATCCAGCATTCAGTCAGCGG...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 72 bp CTAAGACTGTGGTCACCTAGGGGCTGCAGACATATGTaGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: LRLWSPRGCRHM*GLGPGAGKAAT
Trigger: TGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACCACAGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGGTGTTCCTGTCACAATaGGCGGAATGGTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMVFLSQ*AEWCGP
Trigger: AGGACCGCACCATTCCGCTCATTGTGACAGGAACAC...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTCATCAAAGCCCTTTaGGGGTGTTCCTGTCACAAT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLIKAL*GCSCHN
Trigger: ATTGTGACAGGAACACCCTCAAAGGGCTTTGATGAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCACTCTCCAGTTGGTTaGAGGCATGTTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSHSPVG*RHVVCM
Trigger: CATACAGACAACATGCCTTCAACCAACTGGAGAGTG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSCCWIR*SLNNHA
Trigger: GGCATGGTTATTTAGCGATCACCTTATCCAGCAGCA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSISSRK*PGSRLR
Trigger: CCGTAGCCTGGATCCTGGGCACTTTCTACTACTTAT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCGGACGCTCTTCACTGTaGGCAGGAGTGTGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSGRSSL*AGVWSE
Trigger: CTCGCTCCACACTCCTGCGCACAGTGAAGAGCGTCC...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATGGCTCCTGCCACATCTaGCCCACGAACCCGGGACCG +
Preference number: 4 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENGSCHI*PTNPGP
Trigger: CGGTCCCGGGTTCGTGGGGCAGATGTGGCAGGAGCC...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCTCCTCCATCACCCGCTaGAGCATTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCISSITR*SIGCSH
Trigger: GTGGCTGCAGCCAATGCTGCAGCGGGTGATGGAGGA...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCAAGATCTGCAGATGCTaGAAGGTAGGCAAAATTGTC +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPKICRC*KVGKIV
Trigger: GACAATTTTGCCTACCTTGCAGCATCTGCAGATCTT...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCTGCTCCAGCGGGATCTaGTCCCACTTGAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSACSSGI*SHLKCR
Trigger: TCTGCATTTCAAGTGGGAGCAGATCCCGCTGGAGCA...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGGCACAATCTCCAAGCTaGCACCACACATCCATACCC +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKAQSPS*HHTSIP
Trigger: GGGTATGGATGTGTGGTGGCAGCTTGGAGATTGTGC...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACATTCCTTCTCCATTTCTaGTTGCCTTCTTTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTFLLHF*LPSLGL
Trigger: TAACCCTAAAGAAGGCAAGCAGAAATGGAGAAGGAA...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAGGCCGCTGACTGAATaGTGGATGAAAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRPLTE*WMKDPF
Trigger: GAAAGGATCTTTCATCCAGCATTCAGTCAGCGGCCT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp ATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTGGGACAGGGCCATCTGTCTGACATTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IHREKPRFLAPKSTLGQGHLSDI*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAATGTCAGACAGATG...GCCCTGTCCCAACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTTCTGCTCGATCCGCGTaGCCACACTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVSARSA*PHCQRP
Trigger: AGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAGA...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCTCTGCTCGATCCGCGTaGCCACACTGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSSARSA*PHCQRP
Trigger: AGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAGA...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCTAAATAACCATGCCTaGGCTGGTGGTGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSALNNHA*AGGGLL
Trigger: CAAGAGCCCACCACCAGCCCAGGCATGGTTATTTAG...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGACATTAAGGTGGAGGTaGCAGCCAGGCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKTLRWR*QPGISP
Trigger: AGGGGAAATGCCTGGCTGCCACCTCCACCTTAATGT...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGGGGAAGACATTAAGGTaGAGGTGGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKGKTLR*RWQPGI
Trigger: AATGCCTGGCTGCCACCTCCACCTTAATGTCTTCCC...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGCCGCTGACTGAATGCTaGATGAAAGATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEPLTEC*MKDPFL
Trigger: AAGGAAAGGATCTTTCATCCAGCATTCAGTCAGCGG...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCTGTCTGACATTTGCTaGTCACCAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMLSDIC*SPAGQA
Trigger: AGCCTGCCCAGCTGGTGACCAGCAAATGTCAGACAG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 72 bp AAAGCCTCTGCCTTAGCCCCAATGCTGTCCTGGACTTaGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: KASALAPMLSWT*AGLFPEGHRIQ
Trigger: TTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAGGACAGCATTGGGGCTAAGGCAGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp GTCTCCGTGTTCTCAGTATCGGGAGAGGAGAGAGCAGGTTATTCTGTACACAGAAATGGCGGGTGTCCCTaGTGGGTCGGTCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: VSVFSVSGEERAGYSVHRNGGCP*WVGLSS
Trigger: TGAGCTCAGACCGACCCATCAGGGACACCCGCCATT...TCTGTGTACAGAATAACCTGCTCTCTCCTCTCCCGATACTGAGAACACGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAGTCATCCACTAAAATaGTCTCCTGGATCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSHPLK*SPGSSW
Trigger: CCAGCTTGATCCAGGAGATCATTTTAGTGGATGACT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCGGATCTGCTCCCACTTaGAATGCAGACTCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSAGSAPT*NADSSQ
Trigger: TTGACTGGAGTCTGCATTTCAAGTGGGAGCAGATCC...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCCGCTGCAGCATTGGCTaGAGCCACTCCACATTCACC +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSRCSIG*SHSTFT
Trigger: GGTGAATGTGGAGTGGCTGCAGCCAATGCTGCAGCG...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSKQLTP*LMTPGS
Trigger: GCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTAGGGTTACACGTTTaGAGTATGACTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLGLHV*SMTGDP
Trigger: TGGATCCCCAGTCATACTGCAAACGTGTAACCCTAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GGGCTCGTTGAGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGAGCTGTTGTTCATCTGTaGCTGGTCGTGGAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: GLVENYLTRQLEEEAAKGAVVHL*LVVEAY
Trigger: GTAAGCCTCCACGACCAGGCACAGATGAACAACAGC...TCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCTCAACGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTGTCACTCTCCAGTTaGTTGAAGGCATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLSLSS*LKACCL
Trigger: CAGACAACATGCCTTCAACCAACTGGAGAGTGACAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTACTAAAATGATCTCCTaGATCAAGCTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GESQRCRETAGVPARVGTTKMIS*IKLAGV
Trigger: AACTCCTGCCAGCTTGATCCAGGAGATCATTTTAGT...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCTCATACTTTCCCAGATaGTTAAACCAGGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPSYFPR*LNQDLS
Trigger: TGACAAGTCCTGGTTTAACCATCTGGGAAAGTATGA...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGTCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKSPAVF*PWDSKQ
Trigger: CTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGA...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCGCTGACTGAATGCTaGATGAAAGATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPLTEC*MKDPFL
Trigger: AAGGAAAGGATCTTTCATCCAGCATTCAGTCAGCGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GCTCCCAGGAAGACCATCATGCCTGAATGCTTTCCTGTGTACAGAGCAAGGGGACTGTCTGACATTTGCTaGTCACCAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: APRKTIMPECFPVYRARGLSDIC*SPAGQA
Trigger: AGCCTGCCCAGCTGGTGACCAGCAAATGTCAGACAG...TCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR TCA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCCCTGATGGGTCGGTCTaGGCTCAGTTTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LASFETHYNHWPLVKGFSPDGSV*AQFVTL
Trigger: GAGAGTGACAAACTGAGCTCAGACCGACCCATCAGG...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCCATTGCGAAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCIHCEGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATG...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp AGGAAGCCATGGCTCACTCACTGGACAATAGGGCTCGTTGAGAACTATCTTACCTGGTGGGCTCTTGGCTaGCCCTCTGCATATCCCCAT +
Preference number: 4 (lower is better)
Translates to: RKPWLTHWTIGLVENYLTWWALG*PSAYPH
Trigger: ATGGGGATATGCAGAGGGTCAGCCAAGAGCCCACCA...GGTAAGATAGTTCTCAACGAGCCCTATTGTCCAGTGAGTGAGCCATGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR GCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATATCCTCCATCACCCGCTaGAGCATTGGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYISSITR*SIGCSH
Trigger: GTGGCTGCAGCCAATGCTGCAGCGGGTGATGGAGGA...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCAAGATCTGCAGATGCTaGAAGGTAGGCAAAATTGTC +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSKICRC*KVGKIV
Trigger: GACAATTTTGCCTACCTTGCAGCATCTGCAGATCTT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTTCCATCTTCTTCCTCTaGTCGATCCGCGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LQERGPILTSHLAPQCNVSIFFL*SIRVAT
Trigger: TGTGGCCACGCGGATCGAGCAGAGGAAGAAGATGGA...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CACTTAGCTGCAGCGTCTGCTCTGCTGGGCCTAGATGATGCCAGAGGCTCCTCATTAGGGTTACACGTTTaGAGTATGACTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: HLAAASALLGLDDARGSSLGLHV*SMTGDP
Trigger: TGGATCCCCAGTCATACTGCAAACGTGTAACCCTAA...TGAGGAGCCTCTGGCATCATCTAGGCCCAGCAGAGCAGACGCTGCAGCTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCACTAAAATGATCTCCTaGATCAAGCTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSTKMIS*IKLAGV
Trigger: AACTCCTGCCAGCTTGATCCAGGAGATCATTTTAGT...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTGCATCCCTCCCTCGCTCACCCAGTGGCCGGAGCTTCTCAACCCTTCCTCTTCTCATACTTTCCCAGATaGTTAAACCAGGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: LHPSLAHPVAGASQPFLFSYFPR*LNQDLS
Trigger: TGACAAGTCCTGGTTTAACCATCTGGGAAAGTATGA...GAAGAGGAAGGGTTGAGAAGCTCCGGCCACTGGGTGAGCGAGGGAGGGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCGTTTGCAGTATGACTaGGGATCCAGGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMRLQYD*GSRGRH
Trigger: ATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CTGAAAGCCTATGTGAAGGAAGCCATGGCTCACTCACTGGACAATAGGGCTCGTTACACGTTTGCAGTATaGCTGGGGATCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKAYVKEAMAHSLDNRARYTFAV*LGIQGK
Trigger: CTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTA...ACGAGCCCTATTGTCCAGTGAGTGAGCCATGGCTTCCTTCACATAGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR TCA 90 bp AGTCCTCATGGTGGTTCTTCCATTGTCCCAGGGAGTATCCTCAGCACAAAGACAGCAGAGGCCGCTGACTaGATGCTGGATGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SPHGGSSIVPGSILSTKTAEAAD*MLDERS
Trigger: GGATCTTTCATCCAGCATTCAGTCAGCGGCCTCTGC...TGTCTTTGTGCTGAGGATACTCCCTGGGACAATGGAAGAACCACCATGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR GCA 90 bp CCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGGGCAAGAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLCPGQLHTNHLLSQGKKQLTP*LMTPGS
Trigger: GCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTT...CTTGCCCTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTCCTTCTCCATTTCTaGTTGCCTTCTTTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSFLLHF*LPSLGL
Trigger: TAACCCTAAAGAAGGCAAGCAGAAATGGAGAAGGAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCTTGTCACTCTCCAGTTaGTTGAAGGCATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSALSLSS*LKACCL
Trigger: CAGACAACATGCCTTCAACCAACTGGAGAGTGACAA...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCTCTCCTGGATCAAGCTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCISPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAGCTTGATCCAGGAGA...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCATACTTTCCCAGATaGTTAAACCAGGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSYFPR*LNQDLS
Trigger: TGACAAGTCCTGGTTTAACCATCTGGGAAAGTATGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp ATAGGGCTCGTTGAGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGGAAGACATTAAGGTaGAGGTGGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: IGLVENYLTRQLEEEAAKGKTLR*RWQPGI
Trigger: AATGCCTGGCTGCCACCTCCACCTTAATGTCTTCCC...TTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCTCAACGAGCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CCA 90 bp ACAATAGGGCTCGTTGAGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTCGTTTGCAGTATGACTaGGGATCCAGGGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: TIGLVENYLTRQLEEEAARLQYD*GSRGRH
Trigger: ATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACG...AGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCTCAACGAGCCCTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR GCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATGAGAACTGTGGCTCCTaGCACATCTGCCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENENCGS*HICPTN
Trigger: GTTCGTGGGGCAGATGTGGCAGGAGCCACAGTTCTC...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GTCTCCGTGTTCTCAGTATCGGGAGAGGAGAGAGCAGGTTATTCTGTACACAGAGCACAATCTCCAAGCTaGCACCACACATCCATACCC +
Preference number: 4 (lower is better)
Translates to: VSVFSVSGEERAGYSVHRAQSPS*HHTSIP
Trigger: GGGTATGGATGTGTGGTGGCAGCTTGGAGATTGTGC...TCTGTGTACAGAATAACCTGCTCTCTCCTCTCCCGATACTGAGAACACGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATATCCATCTTCTTCCTCTaGTCGATCCGCGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYISIFFL*SIRVAT
Trigger: TGTGGCCACGCGGATCGAGCAGAGGAAGAAGATGGA...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATACAGGCTTCAGCTGCTTaGCTGACAGGTACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYIQASAA*LTGTPS
Trigger: AGAAGGCGTACCTGTCAGCCAAGCAGCTGAAGCCTG...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCACTAAAATGATCTCCTaGATCAAGCTGGCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KKGQGRRQRARSSCQVSATKMIS*IKLAGV
Trigger: AACTCCTGCCAGCTTGATCCAGGAGATCATTTTAGT...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCCCCCAGATGTCCATCTaGGCATCATACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCIPQMSI*ASYFPR
Trigger: TCTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp TTAAACAAACACTTAGCTGCAGCGTCTGCTCTGCTGGGCCTAGATGATGCCAGACTAAATAACCATGCCTaGGCTGGTGGTGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LNKHLAAASALLGLDDARLNNHA*AGGGLL
Trigger: CAAGAGCCCACCACCAGCCCAGGCATGGTTATTTAG...TCTGGCATCATCTAGGCCCAGCAGAGCAGACGCTGCAGCTAAGTGTTTGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CCA 90 bp TGCCCCCAGACTGGCAGAACTAATGTTAAACAAACACTTAGCTGCAGCGTCTGCACATTAAGGTGGAGGTaGCAGCCAGGCATTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CPQTGRTNVKQTLSCSVCTLRWR*QPGISP
Trigger: AGGGGAAATGCCTGGCTGCCACCTCCACCTTAATGT...GCAGACGCTGCAGCTAAGTGTTTGTTTAACATTAGTTCTGCCAGTCTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR TCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATCATTGCGAAGGCACTTaGCCTTGGGGATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENHCEGT*PWGSWS
Trigger: TGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATG...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp ATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGATGATTGTGGATGTGAGTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCC +
Preference number: 4 (lower is better)
Translates to: ILPGSWRRRQLKDDCGCECCWIR*SLNNHA
Trigger: GGCATGGTTATTTAGCGATCACCTTATCCAGCAGCA...CTCACATCCACAATCATCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR GCA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGAAGATCTGCAGATGCTaGAAGGTAGGCAAAATTGTC +
Preference number: 4 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMKICRC*KVGKIV
Trigger: GACAATTTTGCCTACCTTGCAGCATCTGCAGATCTT...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp GTCTCCGTGTTCTCAGTATCGGGAGAGGAGAGAGCAGGTTATTCTGTACACAGAGTCCATCCACACCTCTaGCGTTCGCTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: VSVFSVSGEERAGYSVHRVHPHL*RSLCIP
Trigger: AGGAATACAAAGCGAACGGCAGAGGTGTGGATGGAC...TCTGTGTACAGAATAACCTGCTCTCTCCTCTCCCGATACTGAGAACACGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp TTAAACAAACACTTAGCTGCAGCGTCTGCTCTGCTGGGCCTAGATGATGCCAGATCTTGGCTGACCCTCTaGATATCCCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LNKHLAAASALLGLDDARSWLTL*ISPFQA
Trigger: TGCTTGGAATGGGGATATGCAGAGGGTCAGCCAAGA...TCTGGCATCATCTAGGCCCAGCAGAGCAGACGCTGCAGCTAAGTGTTTGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR GCA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGTTCCTTCTCCATTTCTaGTTGCCTTCTTTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GHEACPCTLPELALEKCVFLLHF*LPSLGL
Trigger: TAACCCTAAAGAAGGCAAGCAGAAATGGAGAAGGAA...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp ACCATCATGCCTGAATGCTTTCCTGTGTACAGAGCAAGGGGAAAGGCAGGTCTGAGGCCGCTGACTGAATaGTGGATGAAAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: TIMPECFPVYRARGKAGLRPLTE*WMKDPF
Trigger: GAAAGGATCTTTCATCCAGCATTCAGTCAGCGGCCT...CAGACCTGCCTTTCCCCTTGCTCTGTACACAGGAAAGCATTCAGGCATGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR GCA 90 bp TCTTCCAAAGTAGTAGTCCTCATGGTGGTTCTTCCATTGTCCCAGGGAGTATCCCATCTGTCTGACATTTaGTGGTCACCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSKVVVLMVVLPLSQGVSHLSDI*WSPAGQ
Trigger: CTGCCCAGCTGGTGACCAGCAAATGTCAGACAGATG...GGATACTCCCTGGGACAATGGAAGAACCACCATGAGGACTACTACTTTGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR CCA 90 bp AGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGATGATTGTGGATCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RTILPGSWRRRQLKDDCGSPAVF*PWDSKQ
Trigger: CTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGA...TCCACAATCATCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR TCA 90 bp GTCTCCGTGTTCTCAGTATCGGGAGAGGAGAGAGCAGGTTATTCTGTACACAGACACTCTCCAGTTGGTTaGAGGCATGTTGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: VSVFSVSGEERAGYSVHRHSPVG*RHVVCM
Trigger: CATACAGACAACATGCCTTCAACCAACTGGAGAGTG...TCTGTGTACAGAATAACCTGCTCTCTCCTCTCCCGATACTGAGAACACGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATAGTCCATCCACACCTCTaGCGTTCGCTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYIVHPHL*RSLCIP
Trigger: AGGAATACAAAGCGAACGGCAGAGGTGTGGATGGAC...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTTCTCCTGGATCAAGCTaGCAGGAGTTCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSSPGSS*QEFGSG
Trigger: TCCTGAACCGAACTCCTGCCAGCTTGATCCAGGAGA...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATGGGAAGACATTAAGGTaGAGGTGGCAGCCAGGCATT +
Preference number: 4 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENGKTLR*RWQPGI
Trigger: AATGCCTGGCTGCCACCTCCACCTTAATGTCTTCCC...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CCA 90 bp GGGAGTATCCTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTGAATCCGCTGACTGAATGCTaGATGAAAGATCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSILSTKTQLPGRPSCLNPLTEC*MKDPFL
Trigger: AAGGAAAGGATCTTTCATCCAGCATTCAGTCAGCGG...ATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAGGATACTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR CAA 72 bp CTGGTAGTGCTAATCCAGCGCAAAGGATCAGAGGCTTaGAAAAACCACGAAGCAGGGAAAATCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LVVLIQRKGSEA*KNHEAGKIQAQ
Trigger: TTGAGCCTGGATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGCACTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
3UTR CAA 72 bp TCTTCCAAAGTAGTAGTCCTCATGGTGGTTCTTCCATaGTCCCAGGGAGTATCCTCAGCACAAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: SSKVVVLMVVLP*SQGVSSAQRHS
Trigger: GCTGTGTCTTTGTGCTGAGGATACTCCCTGGGACAATGGAAGAACCACCATGAGGACTACTACTTTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR TCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATACTCATCAAAGCCCTTTaGGGGTGTTCCTGTCACAAT +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYILIKAL*GCSCHN
Trigger: ATTGTGACAGGAACACCCTCAAAGGGCTTTGATGAG...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR TCA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTGACTATCCAGAAAAGTaGGAACTGTGGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSDYPEK*ELWLLP
Trigger: TGGCAGGAGCCACAGTTCTCACTTTTCTGGATAGTC...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp TTAAACAAACACTTAGCTGCAGCGTCTGCTCTGCTGGGCCTAGATGATGCCAGAAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LNKHLAAASALLGLDDARKQLTP*LMTPGS
Trigger: GCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTT...TCTGGCATCATCTAGGCCCAGCAGAGCAGACGCTGCAGCTAAGTGTTTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CCA 90 bp GCTAATCCAGCGCAAAGGATCAGAGGCTTTGAAAAACCACGAAGCAGGGAAAATCCCCAGATGTCCATCTaGGCATCATACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ANPAQRIRGFEKPRSRENPQMSI*ASYFPR
Trigger: TCTGGGAAAGTATGATGCCCAGATGGACATCTGGGG...ATTTTCCCTGCTTCGTGGTTTTTCAAAGCCTCTGATCCTTTGCGCTGGATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATATTAGGGTTACACGTTTaGAGTATGACTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SQRVTGSKARSVNSSVYILGLHV*SMTGDP
Trigger: TGGATCCCCAGTCATACTGCAAACGTGTAACCCTAA...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTAGGCCGCTGACTGAATaGTGGATGAAAGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSRPLTE*WMKDPF
Trigger: GAAAGGATCTTTCATCCAGCATTCAGTCAGCGGCCT...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp CAGACTGGCAGAACTAATGTTAAACAAACACTTAGCTGCAGCGTCTGCTCTGCTTCGTGGAGGCTTACCTaGTTGCCTTCTTTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: QTGRTNVKQTLSCSVCSASWRLT*LPSLGL
Trigger: TAACCCTAAAGAAGGCAAGCAGGTAAGCCTCCACGA...AGCAGAGCAGACGCTGCAGCTAAGTGTTTGTTTAACATTAGTTCTGCCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR GCA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSKQLTP*LMTPGS
Trigger: GCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTT...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR GCA 90 bp AAGACACAGCTCCCAGGAAGACCATCATGCCTGAATGCTTTCCTGTGTACAGAGTTCCTTCTCCATTTCTaGTTGCCTTCTTTAGGGTTA +
Preference number: 4 (lower is better)
Translates to: KTQLPGRPSCLNAFLCTEFLLHF*LPSLGL
Trigger: TAACCCTAAAGAAGGCAAGCAGAAATGGAGAAGGAA...CTCTGTACACAGGAAAGCATTCAGGCATGATGGTCTTCCTGGGAGCTGTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
3UTR CAA 72 bp CCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTaGGCTGCTTCTCTATCCACGTTCTTCTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: PEKRPWFSGTSQ*AASLSTFFCES
Trigger: AGATTCACAGAAGAACGTGGATAGAGAAGCAGCCAACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS GCA 90 bp ATGGTGCGGTCCTCGCGGAGCTGCTCTGGTCTCCCGCCGGCCCTCTaGGCGCCGCGGCCGCTGGAGGATGCTGCATGGGCTCGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: MVRSSRSCSGLPPAL*APRPLEDAAWARLS
Trigger: GGACAACCGAGCCCATGCAGCATCCTCCAGCGGCCGCGGCGCGCAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAGGACCGCACCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 90 bp GGTGTTCCTGTCACAATGAGCGGAATGGTGCGGTCCTCGCGGAGCTaGTCTGGTCTCCCGCCGGCCCTCTGCGCGCCGCGGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GVPVTMSGMVRSSRS*SGLPPALCAPRPLE
Trigger: CTCCAGCGGCCGCGGCGCGCAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAGGACCGCACCATTCCGCTCATTGTGACAGGAACACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CCA 90 bp TCCTGTCACAATGAGCGGAATGGTGCGGTCCTCGCGGAGCTGCTCTaGTCTCCCGCCGGCCCTCTGCGCGCCGCGGCCGCTGGAGGATGC +
Preference number: 5 (lower is better)
Translates to: SCHNERNGAVLAELL*SPAGPLRAAAAGGC
Trigger: GCATCCTCCAGCGGCCGCGGCGCGCAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAGGACCGCACCATTCCGCTCATTGTGACAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GGACTGAGTCCCCGCACGGGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACACCAGCTGGGCAGGCTTaGTCTCCAGGCAGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: GLSPRTGQLPSAEPGLTTPAGQA*SPGRGR
Trigger: GCGGCCTCTGCCTGGAGACAAAGCCTGCCCAGCTGG...TGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCCCGTGCGGGGACTCAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCAGCTGGGCAGGCTTaGTCTCCAGGCAGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPAGQA*SPGRGR
Trigger: GCGGCCTCTGCCTGGAGACAAAGCCTGCCCAGCTGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGGCTGGTGGTGGGCTCTaGGCTGACCCTCTGCATATC +
Preference number: 5 (lower is better)
Translates to: EPGLTTGNGERPPSRLSEAGGGL*ADPLHI
Trigger: GATATGCAGAGGGTCAGCCAAGAGCCCACCACCAGC...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCCATCAAGGCTCTCTGAGCGAAGGCACTTGACCTaGGGGATCCTGGTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: EPGLTTGNGERPPSRLSERRHLT*GILVRS
Trigger: GCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCG...CTCAGAGAGCCTTGATGGGGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCGCTGGTGGTGGGCTCTaGGCTGACCCTCTGCATATC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSAGGGL*ADPLHI
Trigger: GATATGCAGAGGGTCAGCCAAGAGCCCACCACCAGC...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCCAGCTGGGCAGGCTTaGTCTCCAGGCAGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMPAGQA*SPGRGR
Trigger: GCGGCCTCTGCCTGGAGACAAAGCCTGCCCAGCTGG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS CCA 90 bp TTGTCCAAGCTGATGACGTCGATGATGGGGCTCACCACACGGGTGTaGTCCTCCATCACCCGCTGCAGCATTGGCTGCAGCCACTCCACA +
Preference number: 5 (lower is better)
Translates to: LSKLMTSMMGLTTRV*SSITRCSIGCSHST
Trigger: TGTGGAGTGGCTGCAGCCAATGCTGCAGCGGGTGATGGAGGACCACACCCGTGTGGTGAGCCCCATCATCGACGTCATCAGCTTGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCGAAGGCACTTGACCTaGGGGATCCTGGTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRRHLT*GILVRS
Trigger: GCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTCGGTCTGAGCTCAGTTaGTCACTCTCCAGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: GESQRCRETAGVPARVGTRSELS*SLSSWL
Trigger: CAACCAACTGGAGAGTGACAAACTGAGCTCAGACCG...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCATTGCGAAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 90 bp CTGCTCGATCCGCGTGGCCACACTGCCAAAGGCCTTCCCGATGGCTaGGGGCCGGGCCTCATAATAATACTGTTTGTACTCGTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LLDPRGHTAKGLPDG*GPGLIIILFVLVHP
Trigger: TGGATGGACGAGTACAAACAGTATTATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 90 bp AAGGTGGAGGTGGCAGCCAGGCATTTCCCCTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCCTGGGCTGGTGGTGGGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KVEVAARHFPCCWIR*SLNNHAWAGGGLLA
Trigger: AGCCAAGAGCCCACCACCAGCCCAGGCATGGTTATTTAGCGATCACCTTATCCAGCAGCAGGGGAAATGCCTGGCTGCCACCTCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 90 bp AGGATGCTGCATGGGCTCGGTTGTCCTGCCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGGTCAGGATGGCGATGGCATTGGCGC +
Preference number: 5 (lower is better)
Translates to: RMLHGLGCPAISSRK*PGSRLRSGWRWHWR
Trigger: GCGCCAATGCCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACTTATGGCAGGACAACCGAGCCCATGCAGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CCA 90 bp TCCTCTGCTCGATCCGCGTGGCCACACTGCCAAAGGCCTTCCCGATaGCTGAGGGCCGGGCCTCATAATAATACTGTTTGTACTCGTCCA +
Preference number: 5 (lower is better)
Translates to: SSARSAWPHCQRPSR*LRAGPHNNTVCTRP
Trigger: TGGACGAGTACAAACAGTATTATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCGGTCTGAGCTCAGTTaGTCACTCTCCAGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSRSELS*SLSSWL
Trigger: CAACCAACTGGAGAGTGACAAACTGAGCTCAGACCG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AAAAAGGGCCAAGGGAGAAGACAAAGGGCCAGGAGCAGCTGCCAAGTCTCTGCCCGAAGGCACTTGACCTaGGGGATCCTGGTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KKGQGRRQRARSSCQVSARRHLT*GILVRS
Trigger: GCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCG...GGCAGAGACTTGGCAGCTGCTCCTGGCCCTTTGTCTTCTCCCTTGGCCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCCTTCCCGTTTGTCATaGCGAAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSPSRLS*RRHLTL
Trigger: CAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGTAGTCCTCATGGTGGTTCTTCCATTGTCCCAGGGAGTATCCTCAGCACAAAGCCAGCTGGGCAGGCTTaGTCTCCAGGCAGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: SSPHGGSSIVPGSILSTKPAGQA*SPGRGR
Trigger: GCGGCCTCTGCCTGGAGACAAAGCCTGCCCAGCTGG...CTTTGTGCTGAGGATACTCCCTGGGACAATGGAAGAACCACCATGAGGACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS TCA 90 bp CCCGGGACCGGATCAGTCCTTCCCGTTTGTCATTGCGAAGGCACTTaGCCTTGGGGATCCTGGTCAGAAGCAAACAGTCTTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: PGTGSVLPVCHCEGT*PWGSWSEANSLQDP
Trigger: CGGATCCTGAAGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCCGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTGGTTGAAGGCATGTaGTCTGTATGGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLVEGM*SVWVLS
Trigger: GGAGAGGACCCATACAGACAACATGCCTTCAACCAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GGACAGCTGCCAAGTGCTGAGCCGGGTCTGACCACAGGAAATGGGGAGAGGCCCCTTCTCCATTTCTGCTaGCCTTCTTTAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: GQLPSAEPGLTTGNGERPLLHFC*PSLGLH
Trigger: GTGTAACCCTAAAGAAGGCAAGCAGAAATGGAGAAG...GGGCCTCTCCCCATTTCCTGTGGTCAGACCCGGCTCAGCACTTGGCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GGTGAGAGCCAGAGGTGCAGGGAAACTGCTGGAGTACCCGCCAGAGTGGGCACTTCACTCTCCAGTTGGTaGAAGGCATGTTGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: GESQRCRETAGVPARVGTSLSSW*KACCLY
Trigger: ATACAGACAACATGCCTTCAACCAACTGGAGAGTGA...AGTGCCCACTCTGGCGGGTACTCCAGCAGTTTCCCTGCACCTCTGGCTCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTAGCCAGCTTCGAAACCCACTACAACCACTGGCCTTTGGTGAAGGGATTTAGCGCTGGTGGTGGGCTCTaGGCTGACCCTCTGCATATC +
Preference number: 5 (lower is better)
Translates to: LASFETHYNHWPLVKGFSAGGGL*ADPLHI
Trigger: GATATGCAGAGGGTCAGCCAAGAGCCCACCACCAGC...GCTAAATCCCTTCACCAAAGGCCAGTGGTTGTAGTGGGTTTCGAAGCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTTAGGGTTACACGTTaGCAGTATGACTGGGGATCC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSFRVTR*QYDWGS
Trigger: GGATCCCCAGTCATACTGCAAACGTGTAACCCTAAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GGGCATGAAGCATGCCCCTGCACCCTGCCTGAACTAGCTTTGGAGAAATGCGTGTTGGTTGAAGGCATGTaGTCTGTATGGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GHEACPCTLPELALEKCVLVEGM*SVWVLS
Trigger: GGAGAGGACCCATACAGACAACATGCCTTCAACCAA...CACGCATTTCTCCAAAGCTAGTTCAGGCAGGGTGCAGGGGCATGCTTCATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTCACTCTCCAGTTGGTaGAAGGCATGTTGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSSLSSW*KACCLY
Trigger: ATACAGACAACATGCCTTCAACCAACTGGAGAGTGA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCTTTGTCACTCTCCAGTaGGTTGAAGGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSFVTLQ*VEGMLS
Trigger: AGACAACATGCCTTCAACCAACTGGAGAGTGACAAA...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp ACATATGTTGGGCTTGGGACCTGGGGCTGGCAAAGCAGCAACAGGGTGATGATGCCTTCCCGTTTGTCATaGCGAAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: TYVGLGTWGWQSSNRVMMPSRLS*RRHLTL
Trigger: CAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGG...CATCATCACCCTGTTGCTGCTTTGCCAGCCCCAGGTCCCAAGCCCAACATATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTGGACTTTGGCAGGACTCTTCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTTTAGGGTTACACGTTaGCAGTATGACTGGGGATCC +
Preference number: 5 (lower is better)
Translates to: LDFGRTLPRGSQDPRPGLFRVTR*QYDWGS
Trigger: GGATCCCCAGTCATACTGCAAACGTGTAACCCTAAA...CAGACCTGGCCTTGGATCCTGTGACCCTCTGGGAAGAGTCCTGCCAAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGGAGATGGGAAACAGCCCGCTTGACACTCCCCCACCCTAACCCCTTCCAGTCCCTTCTCCATTTCTGCTaGCCTTCTTTAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: RRWETARLTLPHPNPFQSLLHFC*PSLGLH
Trigger: GTGTAACCCTAAAGAAGGCAAGCAGAAATGGAGAAG...GGACTGGAAGGGGTTAGGGTGGGGGAGTGTCAAGCGGGCTGTTTCCCATCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 90 bp CAAGGATGGGCAACTGTAATGGCGGGTGTCCCTGATGGGTCGGTCTaGGCTCAGTTTGTCACTCTCCAGTTGGTTGAAGGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: QGWATVMAGVPDGSV*AQFVTLQLVEGMLS
Trigger: AGACAACATGCCTTCAACCAACTGGAGAGTGACAAACTGAGCTCAGACCGACCCATCAGGGACACCCGCCATTACAGTTGCCCATCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCTCATTGCGAAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCISLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGA...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CAGCTGCCAAGTCTCTGCCCAGGACAGCTGCATACTAACCATCTCCTCTCCCAGTTTAGGGTTACACGTTaGCAGTATGACTGGGGATCC +
Preference number: 5 (lower is better)
Translates to: QLPSLCPGQLHTNHLLSQFRVTR*QYDWGS
Trigger: GGATCCCCAGTCATACTGCAAACGTGTAACCCTAAA...CTGGGAGAGGAGATGGTTAGTATGCAGCTGTCCTGGGCAGAGACTTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS GCA 90 bp TCACCAGCTGTGTTCTGGCCTTGGGATTCTAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGCACTTCCTTCACGGGGACAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SPAVFWPWDSKQLTP*LMTPGSTSFTGTVS
Trigger: GCTCACTGTCCCCGTGAAGGAAGTGCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 90 bp TGGTCGTGGAGGCTTACCTGCTTGCCTTCTTTAGGGTTACACGTTTaGAGTATGACTGGGGATCCAGGGGAAGACATTAAGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: WSWRLTCLPSLGLHV*SMTGDPGEDIKVEV
Trigger: CACCTCCACCTTAATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTAACCCTAAAGAAGGCAAGCAGGTAAGCCTCCACGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CAA 90 bp CAGACTGGCAGAACTAATGTTAAACAAACACTTAGCTGCAGCGTCTGCTCTGCTGCTGGTGGTGGGCTCTaGGCTGACCCTCTGCATATC +
Preference number: 5 (lower is better)
Translates to: QTGRTNVKQTLSCSVCSAAGGGL*ADPLHI
Trigger: GATATGCAGAGGGTCAGCCAAGAGCCCACCACCAGC...AGCAGAGCAGACGCTGCAGCTAAGTGTTTGTTTAACATTAGTTCTGCCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS CCA 90 bp CATATCCCCATTCCAAGCAGGAGGTCACCAGCTGTGTTCTGGCCTTaGGATTCTAAGCAGTTAACTCCTTGCTTAATGACACCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HIPIPSRRSPAVFWP*DSKQLTPCLMTPGS
Trigger: GCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGACCTCCTGCTTGGAATGGGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTTTGGTTGAAGGCATGTaGTCTGTATGGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LQERGPILTSHLAPQCNVLVEGM*SVWVLS
Trigger: GGAGAGGACCCATACAGACAACATGCCTTCAACCAA...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp TCCCAGAGGGTCACAGGATCCAAGGCCAGGTCTGTAAATAGCAGTGTGTATATATCATTGCGAAGGCACTaGACCTTGGGGATCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SQRVTGSKARSVNSSVYISLRRH*TLGILV
Trigger: GACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGA...TATATACACACTGCTATTTACAGACCTGGCCTTGGATCCTGTGACCCTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp GTCCCAGGGAGTATCCTCAGCACAAAGACACAGCTCCCAGGAAGACCATCATGCCTTCTCCATTTCTGCTaGCCTTCTTTAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: VPGSILSTKTQLPGRPSCLLHFC*PSLGLH
Trigger: GTGTAACCCTAAAGAAGGCAAGCAGAAATGGAGAAG...GCATGATGGTCTTCCTGGGAGCTGTGTCTTTGTGCTGAGGATACTCCCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219267.2
CDS-3UTR CAA 90 bp ATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGATGATTGTGGATGTGAGTGGAGGCTTACCTGCTaGCCTTCTTTAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: ILPGSWRRRQLKDDCGCEWRLTC*PSLGLH
Trigger: GTGTAACCCTAAAGAAGGCAAGCAGGTAAGCCTCCA...CTCACATCCACAATCATCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS GCA 90 bp GAAATGCAGACTCCAGTCAAACCCTCCTCGAAGATCTGCAGATGCTaGAAGGTAGGCAAAATTGTCCAAGCTGATGACGTCGATGATGGG +
Preference number: 5 (lower is better)
Translates to: EMQTPVKPSSKICRC*KVGKIVQADDVDDG
Trigger: CCCATCATCGACGTCATCAGCTTGGACAATTTTGCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGGTTTGACTGGAGTCTGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CCA 90 bp CCTCTGCATATCCCCATTCCAAGCAGGAGGTCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAGTTAACTCCTTGCTTAATGACACCA +
Preference number: 5 (lower is better)
Translates to: PLHIPIPSRRSPAVF*PWDSKQLTPCLMTP
Trigger: TGGTGTCATTAAGCAAGGAGTTAACTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGACCTCCTGCTTGGAATGGGGATATGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTGTCCTTACATTCACAGAGAGAAGCCCAGGTTCCTAGCCCCAAAGTCCACGTTTTTGTCACTCTCCAGTaGGTTGAAGGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: LSLHSQREAQVPSPKVHVFVTLQ*VEGMLS
Trigger: AGACAACATGCCTTCAACCAACTGGAGAGTGACAAA...AACGTGGACTTTGGGGCTAGGAACCTGGGCTTCTCTCTGTGAATGTAAGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CTCCAGGAAAGGGGTCCAATTCTGACTAGCCACCTTGCCCCACAATGCAATGTTTTTGTCACTCTCCAGTaGGTTGAAGGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: LQERGPILTSHLAPQCNVFVTLQ*VEGMLS
Trigger: AGACAACATGCCTTCAACCAACTGGAGAGTGACAAA...AACATTGCATTGTGGGGCAAGGTGGCTAGTCAGAATTGGACCCCTTTCCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp CAACAGGGTGATGATGTCCTGAAAAGAGACCTTGGTTTTCTGGCACTTCACAGTCCTTCCCGTTTGTCATaGCGAAGGCACTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: QQGDDVLKRDLGFLALHSPSRLS*RRHLTL
Trigger: CAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGG...ACTGTGAAGTGCCAGAAAACCAAGGTCTCTTTTCAGGACATCATCACCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS-3UTR CAA 90 bp AGAACTATCTTACCAGGCAGCTGGAGGAGGAGGCAGCTAAAGGATGATTGTGGATTTAGGGTTACACGTTaGCAGTATGACTGGGGATCC +
Preference number: 5 (lower is better)
Translates to: RTILPGSWRRRQLKDDCGFRVTR*QYDWGS
Trigger: GGATCCCCAGTCATACTGCAAACGTGTAACCCTAAA...TCCACAATCATCCTTTAGCTGCCTCCTCCTCCAGCTGCCTGGTAAGATAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS-3UTR CAA 90 bp CTTCTCTATCCACGTTCTTCTGTGAATCTCCATCCTCTGCTCCCAGGCTGCATCCTTCTCCATTTCTGCTaGCCTTCTTTAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: LLYPRSSVNLHPLLPGCILLHFC*PSLGLH
Trigger: GTGTAACCCTAAAGAAGGCAAGCAGAAATGGAGAAG...GATGCAGCCTGGGAGCAGAGGATGGAGATTCACAGAAGAACGTGGATAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021558.8
ENSMUST00000219993.2
CDS CCA 72 bp AATGAGCGGAATGGTGCGGTCCTCGCGGAGCTGCTCTaGTCTCCCGCCGGCCCTCTGCGCGCCGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: NERNGAVLAELL*SPAGPLRAAAA
Trigger: AGCGGCCGCGGCGCGCAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAGGACCGCACCATTCCGCTCATT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp GTCACAATGAGCGGAATGGTGCGGTCCTCGCGGAGCTaGTCTGGTCTCCCGCCGGCCCTCTGCGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: VTMSGMVRSSRS*SGLPPALCAPR
Trigger: CCGCGGCGCGCAGAGGGCCGGCGGGAGACCAGAGCAGCTCCGCGAGGACCGCACCATTCCGCTCATTGTGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp CCGCGTGGCCACACTGCCAAAGGCCTTCCCGATGGCTaGGGGCCGGGCCTCATAATAATACTGTTTGTACTC +
Preference number: 6 (lower is better)
Translates to: PRGHTAKGLPDG*GPGLIIILFVL
Trigger: GAGTACAAACAGTATTATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp GTGGCAGCCAGGCATTTCCCCTGCTGCTGGATAAGGTaGTCGCTAAATAACCATGCCTGGGCTGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: VAARHFPCCWIR*SLNNHAWAGGG
Trigger: CCCACCACCAGCCCAGGCATGGTTATTTAGCGATCACCTTATCCAGCAGCAGGGGAAATGCCTGGCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CCA 72 bp CGATCCGCGTGGCCACACTGCCAAAGGCCTTCCCGATaGCTGAGGGCCGGGCCTCATAATAATACTGTTTGT +
Preference number: 6 (lower is better)
Translates to: RSAWPHCQRPSR*LRAGPHNNTVC
Trigger: ACAAACAGTATTATTATGAGGCCCGGCCCTCAGCCATCGGGAAGGCCTTTGGCAGTGTGGCCACGCGGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 72 bp CGAACCCGGGACCGGATCAGTCCTTCCCGTTTGTCATaGCGAAGGCACTTGACCTTGGGGATCCTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: RTRDRISPSRLS*RRHLTLGILVR
Trigger: TCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCCGGTCCCGGGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp CATGGGCTCGGTTGTCCTGCCATAAGTAGTAGAAAGTaGCCAGGATCCAGGCTACGGTCAGGATGGCGATGG +
Preference number: 6 (lower is better)
Translates to: HGLGCPAISSRK*PGSRLRSGWRW
Trigger: CCATCGCCATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACTTATGGCAGGACAACCGAGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp ACAGTGACTATCCAGAAAAGTGAGAACTGTGGCTCCTaGCACATCTGCCCCACGAACCCGGGACCGGATCAG +
Preference number: 6 (lower is better)
Translates to: TVTIQKSENCGS*HICPTNPGPDQ
Trigger: CTGATCCGGTCCCGGGTTCGTGGGGCAGATGTGGCAGGAGCCACAGTTCTCACTTTTCTGGATAGTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp TACCAGCGGAAGGACTTACAGTCCATCTTCTTCCTCTaGTCGATCCGCGTGGCCACACTGCCAAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: YQRKDLQSIFFL*SIRVATLPKAF
Trigger: GAAGGCCTTTGGCAGTGTGGCCACGCGGATCGAGCAGAGGAAGAAGATGGACTGTAAGTCCTTCCGCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 90 bp ACCCGGGACCGGATCAGTCCTTCCCGTTTGTCATTGCGAAGGCACTaGACCTTGGGGATCCTGGTCAGAAGCAAACAGTCTTCAGGATCC +
Preference number: 6 (lower is better)
Translates to: TRDRISPSRLSLRRH*TLGILVRSKQSSGS
Trigger: GGATCCTGAAGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCCGGTCCCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp GCAACTGTAATGGCGGGTGTCCCTGATGGGTCGGTCTaGGCTCAGTTTGTCACTCTCCAGTTGGTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: ATVMAGVPDGSV*AQFVTLQLVEG
Trigger: GCCTTCAACCAACTGGAGAGTGACAAACTGAGCTCAGACCGACCCATCAGGGACACCCGCCATTACAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp AGGACAAGGATGGGCAACTGTAATGGCGGGTGTCCCTaGTGGGTCGGTCTGAGCTCAGTTTGTCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: RTRMGNCNGGCP*WVGLSSVCHSP
Trigger: TGGAGAGTGACAAACTGAGCTCAGACCGACCCATCAGGGACACCCGCCATTACAGTTGCCCATCCTTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp GCATGTTGTCTGTATGGGTCCTCTCCAGGCTTCAGCTaGTTGGCTGACAGGTACGCCTTCTCATCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: ACCLYGSSPGFS*LADRYAFSSKP
Trigger: GGGCTTTGATGAGAAGGCGTACCTGTCAGCCAAGCAGCTGAAGCCTGGAGAGGACCCATACAGACAACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp CTGATGGGTTTAGTGGGGTCAGTCCGGGTCATCTTCTaGTCCAGCGGGATCTGCTCCCACTTGAAATGCAGA +
Preference number: 6 (lower is better)
Translates to: LMGLVGSVRVIF*SSGICSHLKCR
Trigger: TCTGCATTTCAAGTGGGAGCAGATCCCGCTGGAGCAGAAGATGACCCGGACTGACCCCACTAAACCCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 72 bp TGGCGGGTGTCCCTGATGGGTCGGTCTGAGCTCAGTTaGTCACTCTCCAGTTGGTTGAAGGCATGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: WRVSLMGRSELS*SLSSWLKACCL
Trigger: CAGACAACATGCCTTCAACCAACTGGAGAGTGACAAACTGAGCTCAGACCGACCCATCAGGGACACCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 90 bp GACCGGATCAGTCCTTCCCGTTTGTCATTGCGAAGGCACTTGACCTaGGGGATCCTGGTCAGAAGCAAACAGTCTTCAGGATCCGAACTG +
Preference number: 6 (lower is better)
Translates to: DRISPSRLSLRRHLT*GILVRSKQSSGSEL
Trigger: CAGTTCGGATCCTGAAGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp GTCGGTCTGAGCTCAGTTTGTCACTCTCCAGTTGGTTaGAGGCATGTTGTCTGTATGGGTCCTCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: VGLSSVCHSPVG*RHVVCMGPLQA
Trigger: AGCCTGGAGAGGACCCATACAGACAACATGCCTTCAACCAACTGGAGAGTGACAAACTGAGCTCAGACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 72 bp TGTTGTCTGTATGGGTCCTCTCCAGGCTTCAGCTGCTaGGCTGACAGGTACGCCTTCTCATCAAAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: CCLYGSSPGFSC*ADRYAFSSKPF
Trigger: AAAGGGCTTTGATGAGAAGGCGTACCTGTCAGCCAAGCAGCTGAAGCCTGGAGAGGACCCATACAGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 72 bp CGGATCAGTCCTTCCCGTTTGTCATTGCGAAGGCACTaGACCTTGGGGATCCTGGTCAGAAGCAAACAGTCT +
Preference number: 6 (lower is better)
Translates to: RISPSRLSLRRH*TLGILVRSKQS
Trigger: AGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS TCA 72 bp GGATCAGTCCTTCCCGTTTGTCATTGCGAAGGCACTTaGCCTTGGGGATCCTGGTCAGAAGCAAACAGTCTT +
Preference number: 6 (lower is better)
Translates to: GSVLPVCHCEGT*PWGSWSEANSL
Trigger: AAGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp GTGTTCTGGCCTTGGGATTCTAAGCAGTTAACTCCTTaGTTAATGACACCAGGGAGCACTTCCTTCACGGGG +
Preference number: 6 (lower is better)
Translates to: VFWPWDSKQLTP*LMTPGSTSFTG
Trigger: CCCCGTGAAGGAAGTGCTCCCTGGTGTCATTAAGCAAGGAGTTAACTGCTTAGAATCCCAAGGCCAGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS CAA 72 bp AGTCCTTCCCGTTTGTCATTGCGAAGGCACTTGACCTaGGGGATCCTGGTCAGAAGCAAACAGTCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: SPSRLSLRRHLT*GILVRSKQSSG
Trigger: TCCTGAAGACTGTTTGCTTCTGACCAGGATCCCCAAGGTCAAGTGCCTTCGCAATGACAAACGGGAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp ACTCCAGTCAAACCCTCCTCGAAGATCTGCAGATGCTaGAAGGTAGGCAAAATTGTCCAAGCTGATGACGTC +
Preference number: 6 (lower is better)
Translates to: TPVKPSSKICRC*KVGKIVQADDV
Trigger: GACGTCATCAGCTTGGACAATTTTGCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGGTTTGACTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp CTGTTGTTCATCTGTGCCTGGTCGTGGAGGCTTACCTaGTTGCCTTCTTTAGGGTTACACGTTTGCAGTATG +
Preference number: 6 (lower is better)
Translates to: LLFICAWSWRLT*LPSLGLHVCSM
Trigger: CATACTGCAAACGTGTAACCCTAAAGAAGGCAAGCAGGTAAGCCTCCACGACCAGGCACAGATGAACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS CCA 72 bp ATCCCCATTCCAAGCAGGAGGTCACCAGCTGTGTTCTaGCCTTGGGATTCTAAGCAGTTAACTCCTTGCTTA +
Preference number: 6 (lower is better)
Translates to: IPIPSRRSPAVF*PWDSKQLTPCL
Trigger: TAAGCAAGGAGTTAACTGCTTAGAATCCCAAGGCCAGAACACAGCTGGTGACCTCCTGCTTGGAATGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021558.8
ENSMUST00000217926.2
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp GAAATGCAGACTCCAGTCAAACCCTCCTCGAAGATCTaGAGATGCTGCAAGGTAGGCAAAATTGTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: EMQTPVKPSSKI*RCCKVGKIVQA
Trigger: AGCTTGGACAATTTTGCCTACCTTGCAGCATCTGCAGATCTTCGAGGAGGGTTTGACTGGAGTCTGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2
CDS GCA 72 bp AGGCTTACCTGCTTGCCTTCTTTAGGGTTACACGTTTaGAGTATGACTGGGGATCCAGGGGAAGACATTAAG +
Preference number: 6 (lower is better)
Translates to: RLTCLPSLGLHV*SMTGDPGEDIK
Trigger: CTTAATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTAACCCTAAAGAAGGCAAGCAGGTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000217926.2
CDS GCA 72 bp CTCCATTTCTGCTTGCCTTCTTTAGGGTTACACGTTTaGAGTATGACTGGGGATCCAGGGGAAGACATTAAG +
Preference number: 6 (lower is better)
Translates to: LHFCLPSLGLHV*SMTGDPGEDIK
Trigger: CTTAATGTCTTCCCCTGGATCCCCAGTCATACTGCAAACGTGTAACCCTAAAGAAGGCAAGCAGAAATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021558.8
ENSMUST00000218943.2
ENSMUST00000219993.2