Pregenerated sensors for GALNT14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024064Ensembl transcript IDs: ENSMUST00000024858.12, ENSMUST00000112591.3
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTaGAGTCATGAGCTGTTCACAACCTGGGTTCCAGTTTGGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PVLGAFALPPVEDIG*SHELFTTWVPVWFG Trigger: ACCAAACCAAACTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CCA 90 bp | CCTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTaGGTTCCAGTTTGGTTTGGTCCAGGGAAGCATCATTCCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PPVEDIGCSHELFTT*VPVWFGPGKHHSWS Trigger: GGACCAGGAATGATGCTTCCCTGGACCAAACCAAACTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CCA 90 bp | ACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCAGAAAACCTaGCCAGGACTGGACCTTCATAATATTGCACACATGAGGGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: TLPIGSPSPGPNQKT*PGLDLHNIAHMRVS Trigger: TGACACCCTCATGTGTGCAATATTATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR TCA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCAGCCCTGCTGGTTTGTaGCCTTTTCCTCCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPSPAGL*PFPPSS Trigger: GGAAGATGGAGGAAAAGGTCACAAACCAGCAGGGCT...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTGGGTTCCAGGGGAAGCATCATTCCTaGTCCACAGTTGAATGCACC | + |
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Preference number: 2 (lower is better) Translates to: LQSRTSGAVMSCSQPGFQGKHHS*STVECT Trigger: GGTGCATTCAACTGTGGACCAGGAATGATGCTTCCC...CTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CCA 90 bp | GGATCTCCATCTCCAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATACCTGGGTTCCAGTTTaGTTTGGTCCAGGGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GSPSPGPNQKTWPGLDLHTWVPV*FGPGKH Trigger: ATGCTTCCCTGGACCAAACCAAACTGGAACCCAGGT...ATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCAGTTCCTCCATCTTCCCTaGGACTGTTGCTCCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ERVQQTLPIGSPSPGPNQFLHLP*DCCSCP Trigger: AGGACAGGAGCAACAGTCTCAGGGAAGATGGAGGAA...CTGATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGTGTCACTGAGCCCTaGTGGTTTGTGACCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPVFFIHSTTRRPTHIQRGVTEP*WFVTFS Trigger: GGAAAAGGTCACAAACCAGCAGGGCTCAGTGACACC...CCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGGAGCTGTTCACAACCTaGGTTCCAGTTTGGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: IHSTTRRPTHIQRGAQMRELFTT*VPVWFG Trigger: ACCAAACCAAACTGGAACCCAGGTTGTGAACAGCTC...CCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATAATATTGCACACAGTCGAGGACATCGGGTaGAGTCATGAGCTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QVPIRKPGQDWTFIILHTVEDIG*SHELFT Trigger: TGTGAACAGCTCATGACTGCACCCGATGTCCTCGAC...TGTGTGCAATATTATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGTTCCAGTTTGGTTTaGTCCAGGGAAGCATCATTC | + |
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Preference number: 2 (lower is better) Translates to: SSCLLHSFYHKTPHPHSEGSSLV*SREASF Trigger: GAATGATGCTTCCCTGGACCAAACCAAACTGGAACC...CTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CCA 90 bp | AAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGCTCTATCTGCCATGCTaGAACACTACGAATTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: KHGKERYRRGEPRLGRMELYLPC*NTTNLK Trigger: TTTCAAATTCGTAGTGTTCCAGCATGGCAGATAGAG...CTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| 3UTR GCA 72 bp | GGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTaGAGTCATGAGCTGTTCACAACCTGGGTTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: GAFALPPVEDIG*SHELFTTWVPV Trigger: AACTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CCA 72 bp | TTTCCTCCATCTTCCCTGAGACTGTTGCTCCTGTCCTaGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCG | + |
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Preference number: 3 (lower is better) Translates to: FPPSSLRLLLLS*EPLLYLQSRTS Trigger: CGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCAACAGTCTCAGGGAAGATGGAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR TCA 72 bp | GCACACATGAGGGTGTCACTGAGCCCTGCTGGTTTGTaGCCTTTTCCTCCATCTTCCCTGAGACTGTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: AHMRVSLSPAGL*PFPPSSLRLLL Trigger: GAGCAACAGTCTCAGGGAAGATGGAGGAAAAGGTCACAAACCAGCAGGGCTCAGTGACACCCTCATGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CCA 72 bp | CGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTaGGCACATAGCTCTATCTGCCATGCTGGAACACTA | + |
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Preference number: 3 (lower is better) Translates to: RGWGEWRCLDTV*AHSSICHAGTL Trigger: TAGTGTTCCAGCATGGCAGATAGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| 3UTR CCA 72 bp | GAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTaGGTTCCAGTTTGGTTTGGTCCAGGGAAGCATCAT | + |
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Preference number: 3 (lower is better) Translates to: EDIGCSHELFTT*VPVWFGPGKHH Trigger: ATGATGCTTCCCTGGACCAAACCAAACTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CCA 72 bp | ATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTaGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: MERKDTEGENRG*GEWRCLDTVWA Trigger: TGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| 3UTR CCA 72 bp | ATCGGATCTCCATCTCCAGGTCCCAATCAGAAAACCTaGCCAGGACTGGACCTTCATAATATTGCACACATG | + |
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Preference number: 3 (lower is better) Translates to: IGSPSPGPNQKT*PGLDLHNIAHM Trigger: CATGTGTGCAATATTATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGTTCCAGTTTGGTTaGGTCCAGGGAAGCATCATT | + |
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Preference number: 3 (lower is better) Translates to: IFLSSSFILPQDAPPTFRGFQFG*VQGSII Trigger: AATGATGCTTCCCTGGACCAAACCAAACTGGAACCC...TCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR-3UTR CAA 90 bp | GTAAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGTGGAACACTACGAATTaGAAAGCCAAGCAAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: VNMERKDTEGENRGWGEWWNTTN*KAKQNK Trigger: CTTGTTTTGCTTGGCTTTCAAATTCGTAGTGTTCCA...CCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | CTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTGGGTTCCAGCCCAGTGCTGGCTCATaGGCGACGACTCACAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LQSRTSGAVMSCSQPGFQPSAGS*ATTHKG Trigger: ACCCTTGTGAGTCGTCGCTCATGAGCCAGCACTGGG...CTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | TGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGGGAAGGTCAGAGTGGTaGCTTGGGCAATGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CSCPGSLCSTSSRGHRVQGRSEW*LGQCQH Trigger: GTGCTGACATTGCCCAAGGCACCACTCTGACCTTCC...CTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | CTGTTGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTAGGCGCAAAGCTTTCTaGTCCAGGGAGAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLLLSWEPLLYLQSRTSGRRKAF*SRESCS Trigger: GGAGCAGCTCTCCCTGGAGCAGAAAGCTTTGCGCCT...ACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCGCCGCTGCCGGATATTaGCCTTCTGGATGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPAAAGY*PSGWRS Trigger: ACTCCTCCATCCAGAAGGGCAATATCCGGCAGCGGC...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | CTGTTGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTCTGGGACAGCCCGATTaGTCGATATCCGCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LLLLSWEPLLYLQSRTSGLGQPD*SISAHS Trigger: AGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAG...ACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | TGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGCCAACTTCCTCTTGGTaGCCCAGAAGAACAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: CSCPGSLCSTSSRGHRVQPTSSW*PRRTAV Trigger: TACTGCTGTTCTTCTGGGTCACCAAGAGGAAGTTGG...CTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | CGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTCTATCGACCGGACCAGACCTTaGCGCTCATTGTTGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RGWGEWRCLDTVWAHSSIDRTRP*RSLLRK Trigger: CTTGCGCAACAATGAGCGGCAAGGTCTGGTCCGGTC...GATAGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACAGAGCACCCCAAAGATaGGCAGCGCCAAGCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RKDTEGENRGWGEWRCLDRAPQR*AAPSGE Trigger: CTCGCCGCTTGGCGCTGCCCATCTTTGGGGTGCTCT...GTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR CCA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCCGACACGCCACTTTTTaGCATTCAGATACCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPRHATF*HSDTAA Trigger: AGCGGCGGTATCTGAATGCCAAAAAGTGGCGTGTCG...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCTTGTGTAGTCCTCTTTaGCCCTGTGTAACAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPLCSPL*PCVTGA Trigger: AGCCCCTGTTACACAGGGTCAAAGAGGACTACACAA...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | GCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAGTGAAGGCCCACACCTaGGACTTTGCTCCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AFALPPVEDIGCSHELFTVKAHT*DFAPSP Trigger: AGGAGATGGAGCAAAGTCTCAGGTGTGGGCCTTCAC...TGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | GGATCTCCATCTCCAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATCGCCGCTCATCAAACTaGTCCCACAGGTCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSPSPGPNQKTWPGLDLHRRSSN*SHRSSQ Trigger: CTGGGATGACCTGTGGGAGCAGTTTGATGAGCGGCG...ATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | AACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTCTCTGGGACAGCCCGATTaGTCGATATCCGCTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: NRGWGEWRCLDTVWAHSSLGQPD*SISAHS Trigger: AGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAG...AGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | CTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTGGGTTCCAGTGGGAGGAAGGTCCGTaGAATACACAAGCAGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LQSRTSGAVMSCSQPGFQWEEGP*NTQAAN Trigger: GTTCGCTGCTTGTGTATTGCACGGACCTTCCTCCCA...CTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | AGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACAGGCAATTTGATGAGTTaGTTGCAGTCCTCGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RGEPRLGRMEVSRHGLGTGNLMS*LQSSGS Trigger: TGACCCCGAGGACTGCAAGCAACTCATCAAATTGCC...TGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | GAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCCTTGCCGCTCATTGTTaGGCAAGCACTTCACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ENRGWGEWRCLDTVWAHSLAAHC*ASTSPW Trigger: CCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAG...GCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | ATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGGACTCAAGGCACTTCTaGCGCTGCCGGATATTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IHSTTRRPTHIQRGAQMRDSRHF*RCRILP Trigger: GGGCAATATCCGGCAGCGGCAGAAGTGCCTTGAGTC...CCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | CTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGAGAGCACCCCAAAGATaGGCAGCGCCAAGCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LPVFFIHSTTRRPTHIQRRAPQR*AAPSGE Trigger: CTCGCCGCTTGGCGCTGCCCATCTTTGGGGTGCTCT...CCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | GAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTACCGCATCGGAAGGCTTaGGGGTCTGCACTTCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ERKDTEGENRGWGEWRCLPHRKA*GSALRV Trigger: GACCCGAAGTGCAGACCCCCAAGCCTTCCGATGCGG...TAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | GAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTTGTGTAGTCCTCTTTaGCCCTGTGTAACAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ENRGWGEWRCLDTVWAHSLCSPL*PCVTGA Trigger: AGCCCCTGTTACACAGGGTCAAAGAGGACTACACAA...GCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACCGCCGCTCATCAAACTaGTCCCACAGGTCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKDTEGENRGWGEWRCLDRRSSN*SHRSSQ Trigger: CTGGGATGACCTGTGGGAGCAGTTTGATGAGCGGCG...GTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | GCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACACAGGCAGAGGTGAGATaGTATGTGCTCAATTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: AFALPPVEDIGCSHELFTQAEVR*YVLNSG Trigger: GCCCGAATTGAGCACATAGCATCTCACCTCTGCCTG...TGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CAA 72 bp | CATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTaGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HGKERYRRGEPR*GRMEVSRHGLG Trigger: GCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | CGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTCTATCCCAACTTCCTCTTGGTaGCCCAGAAGAACAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RGWGEWRCLDTVWAHSSIPTSSW*PRRTAV Trigger: TACTGCTGTTCTTCTGGGTCACCAAGAGGAAGTTGG...GATAGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | CTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTGGGTTCCAGTCTCTAGGTACCACTTaGAGGTCTGGCAGTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LQSRTSGAVMSCSQPGFQSLGTT*RSGSED Trigger: ATCTTCACTGCCAGACCTTCAAGTGGTACCTAGAGA...CTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | CAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATAATATTGCACACACACCAGGAAACAGGGTaGCCACGGACAGGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPIRKPGQDWTFIILHTHQETG*PRTGTA Trigger: AGCTGTGCCTGTCCGTGGTCACCCTGTTTCCTGGTG...TGTGTGCAATATTATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | GGATCTCCATCTCCAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATCTTGCCGCTCATTGTTaGGCAAGCACTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSPGPNQKTWPGLDLHLAAHC*ASTSPW Trigger: CCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAG...ATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | GAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAAGGCGCAAAGCTTTCTaGTCCAGGGAGAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERKDTEGENRGWGEWRCLRRKAF*SRESCS Trigger: GGAGCAGCTCTCCCTGGAGCAGAAAGCTTTGCGCCT...TAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR CCA 90 bp | CTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAACCTGGGTTCCAGCGCTCACTCTCCCGTTaGTTGAAAGCATACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSRTSGAVMSCSQPGFQRSLSR*LKAYSL Trigger: CAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCG...CTGGAACCCAGGTTGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCCTGGATGGAGGAGTCTaGGGGGACCCTGAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKGYNKHFPSDLHLQVPILDGGV*GDPEFW Trigger: CCAGAACTCAGGGTCCCCCCAGACTCCTCCATCCAG...GATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | AGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACAGAACAGCAGTACGGTaGTCCAGAGCACCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKDTEGENRGWGEWRCLDRTAVR*SRAPQR Trigger: TCTTTGGGGTGCTCTGGATCACCGTACTGCTGTTCT...GTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | TCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGACCGGACCAGACCTTaGCGCTCATTGTTGCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLLHSFYHKTPHPHSEDRTRP*RSLLRK Trigger: CTTGCGCAACAATGAGCGGCAAGGTCTGGTCCGGTC...CTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | TCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGAGGCACTTCTGCCGCTaGCGGATATTGCCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLLHSFYHKTPHPHSERHFCR*RILPFW Trigger: CCAGAAGGGCAATATCCGGCAGCGGCAGAAGTGCCT...CTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | GAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGCCCCCTCTGAGCTCTaGGGCAGACTCAATATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERKDTEGENRGWGEWRCLAPSEL*GRLNIV Trigger: AACTATATTGAGTCTGCCTCAGAGCTCAGAGGGGGC...TAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | ATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTTGAAGGTCTGGCAGTaGAGATTCTTCCTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSTTRRPTHIQRGAQMRLKVWQ*RFFLRF Trigger: GAACCTGAGGAAGAATCTTCACTGCCAGACCTTCAA...CCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | TCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGTCTGCTGGGTGTATGTaGAGGCCCACACCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSCLLHSFYHKTPHPHSESAGCM*RPTPET Trigger: AGTCTCAGGTGTGGGCCTTCACATACACCCAGCAGA...CTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | AAGAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCCTCACAATGTCCCAGTaGTGGCTCATGAGCGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKGYNKHFPSDLHLQVPILTMSQ*WLMSDD Trigger: GTCGTCGCTCATGAGCCAGCACTGGGACATTGTGAG...GATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGACAATGTCCCAGTGCTaGCTCATGAGCGACGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVFFIHSTTRRPTHIQRTMSQC*LMSDDS Trigger: TGAGTCGTCGCTCATGAGCCAGCACTGGGACATTGT...CCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| 3UTR CAA 72 bp | GTCATGAGCTGTTCACAACCTGGGTTCCAGTTTGGTTaGGTCCAGGGAAGCATCATTCCTGGTCCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQPGFQFG*VQGSIIPGPQL Trigger: CAACTGTGGACCAGGAATGATGCTTCCCTGGACCAAACCAAACTGGAACCCAGGTTGTGAACAGCTCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCACATAGCTCTATCTGCCATGCTGGAACACTACGAATTTGAAAGCCAAAGTCAAAGCCCCCTCTaGGCTCTGAGGCAGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGHIALSAMLEHYEFESQSQSPL*ALRQTQ Trigger: TTGAGTCTGCCTCAGAGCTCAGAGGGGGCTTTGACT...TTGGCTTTCAAATTCGTAGTGTTCCAGCATGGCAGATAGAGCTATGTGCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | TCTGGGCACATAGCTCTATCTGCCATGCTGGAACACTACGAATTTGAAAGCCAACTGTGTAACAGGGGCTaGAGCCAATCCCTGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGHIALSAMLEHYEFESQLCNRG*SQSLFT Trigger: GGTGAACAGGGATTGGCTGCAGCCCCTGTTACACAG...TTGGCTTTCAAATTCGTAGTGTTCCAGCATGGCAGATAGAGCTATGTGCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR GCA 90 bp | CTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCACCACACCTGAGACTTTaGTCCATCTCCTTTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSFYHKTPHPHSEGSSPHLRL*SISFDL Trigger: AAGGTCAAAGGAGATGGAGCAAAGTCTCAGGTGTGG...TGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | AAGTCAAGGAGTAGGTGTAAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGGTCAGAGTGGTGCCTTaGGCAATGTCAGCACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRSRCKHGKERYRRGEPVRVVP*AMSAPR Trigger: GCGAGGTGCTGACATTGCCCAAGGCACCACTCTGAC...CGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTACACCTACTCCTTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR CCA 90 bp | GAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCAGTCTTGGATGATCTGCTaGGTGTATGTGAAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERVQQTLPIGSPSPGPNQSWMIC*VYVKAH Trigger: GTGGGCCTTCACATACACCCAGCAGATCATCCAAGA...CTGATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | AGGTGTAAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGACAGCACTGTGTCACGTaGGAGTTTCCAAAGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCKHGKERYRRGEPRLGRQHCVT*EFPKGL Trigger: GAGACCCTTTGGAAACTCCCACGTGACACAGTGCTG...TCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAAGCGAACATCTCTTATaGCGTGTGTCTGGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLSSSFILPQDAPPTFRSEHLL*RVSGTA Trigger: GGCTGTCCCAGACACACGTCATAAGAGATGTTCGCT...TCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | GAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTACGCTCACTCTCCCGTTaGTTGAAAGCATACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKDTEGENRGWGEWRCLRSLSR*LKAYSL Trigger: CAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCG...TAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | AAGTCAAGGAGTAGGTGTAAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGCGAACATCTCTTATaGCGTGTGTCTGGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRSRCKHGKERYRRGEPSEHLL*RVSGTA Trigger: GGCTGTCCCAGACACACGTCATAAGAGATGTTCGCT...CGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTACACCTACTCCTTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | TTGTTTTGTAAGAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGAGTCAAAGCCCCCTCTaGGCTCTGAGGCAGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFCKKGYNKHFPSDLHLQSQSPL*ALRQTQ Trigger: TTGAGTCTGCCTCAGAGCTCAGAGGGGGCTTTGACT...CTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTCTTACAAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGATTGCTCCATCTCCTTTaGCCTTGGCACAGGGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSSSFILPQDAPPTFRLLHLL*PWHRDL Trigger: TAAGTCCCTGTGCCAAGGTCAAAGGAGATGGAGCAA...TCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGTCTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGCAATTTGATGAGTTaGTTGCAGTCCTCGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSSSFILPQDAPPTFRGNLMS*LQSSGS Trigger: TGACCCCGAGGACTGCAAGCAACTCATCAAATTGCC...TCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAGACAGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | TTGTTTTGTAAGAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGCTGTGTAACAGGGGCTaGAGCCAATCCCTGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LFCKKGYNKHFPSDLHLQLCNRG*SQSLFT Trigger: GGTGAACAGGGATTGGCTGCAGCCCCTGTTACACAG...CTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTCTTACAAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | TGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCAGCTCTGAAGTGTCTTAGAACAGCAGTACGGTaGTCCAGAGCACCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTLQNMYIFPALKCLRTAVR*SRAPQR Trigger: TCTTTGGGGTGCTCTGGATCACCGTACTGCTGTTCT...AAGACACTTCAGAGCTGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGTTATCGAAGACAATTCCCAAAGTTAGCTTTATTTGTTCTGTAAACCCGCATCGGAAGGCTTaGGGGTCTGCACTTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHELSKTIPKVSFICSVNPHRKA*GSALRV Trigger: GACCCGAAGTGCAGACCCCCAAGCCTTCCGATGCGG...GTTTACAGAACAAATAAAGCTAACTTTGGGAATTGTCTTCGATAACTCATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | GGATCTCCATCTCCAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATCTTCAGCTGTCCTCTTaGTGTTCTTTATATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSPGPNQKTWPGLDLHLQLSS*CSLYMC Trigger: ACACATATATAAAGAACACCAAGAGGACAGCTGAAG...ATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | TTTAAGTCAAGGAGTAGGTGTAAACATGGAAAGGAAAGATACAGAAGGGGAGAAGGAAGGTCAGAGTGGTaGCTTGGGCAATGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKSRSRCKHGKERYRRGEGRSEW*LGQCQH Trigger: GTGCTGACATTGCCCAAGGCACCACTCTGACCTTCC...TTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTACACCTACTCCTTGACTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | GTTGAAACTGAAGTTTGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCAGCCCCCTCTGAGCTCTaGGGCAGACTCAATATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VETEVCKPSTLQNMYIFPAPSEL*GRLNIV Trigger: AACTATATTGAGTCTGCCTCAGAGCTCAGAGGGGGC...TGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCAAACTTCAGTTTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGTTATCGAAGACAATTCCCAAAGTTAGCTTTATTTGTTCTGTAAACGTCAGAGTGGTGCCTTaGGCAATGTCAGCACCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QHELSKTIPKVSFICSVNVRVVP*AMSAPR Trigger: GCGAGGTGCTGACATTGCCCAAGGCACCACTCTGAC...GTTTACAGAACAAATAAAGCTAACTTTGGGAATTGTCTTCGATAACTCATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | AACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGCTTCAGCTGTCCTCTTaGTGTTCTTTATATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NMERKDTEGENRGWGEWRLQLSS*CSLYMC Trigger: ACACATATATAAAGAACACCAAGAGGACAGCTGAAG...CCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS-3UTR TCA 90 bp | AGCCTCCATAAGGTGTCTTGTTTTGTAAGAAAGGGTACAACAAACACTTCCCATGTATCCAGGCAGAGGTaGGATGCTATGTGCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLHKVSCFVRKGTTNTSHVSRQR*DAMCSI Trigger: AATTGAGCACATAGCATCTCACCTCTGCCTGGATAC...ATGGGAAGTGTTTGTTGTACCCTTTCTTACAAAACAAGACACCTTATGGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR GCA 90 bp | AGCCTCCATAAGGTGTCTTGTTTTGTAAGAAAGGGTACAACAAACACTTCCCATTCTTCTTGGATGATCTaGTGGGTGTATGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLHKVSCFVRKGTTNTSHSSWMI*WVYVKA Trigger: GGCCTTCACATACACCCAGCAGATCATCCAAGAAGA...ATGGGAAGTGTTTGTTGTACCCTTTCTTACAAAACAAGACACCTTATGGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR TCA 90 bp | GTTGAAACTGAAGTTTGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCACACTCTCCCGTTGGTTaGAAGCATACAGTTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VETEVCKPSTLQNMYIFPHSPVG*KHTVCR Trigger: CCTACAAACTGTATGCTTTCAACCAACGGGAGAGTG...TGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCAAACTTCAGTTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGTTATCGAAGACAATTCCCAAAGTTAGCTTTATTTGTTCTGTAAACTTCGGGCACCAGTCTTaGTCCATAGCTGCCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHELSKTIPKVSFICSVNFGHQS*SIAAFH Trigger: ATGAAAGGCAGCTATGGACCAAGACTGGTGCCCGAA...GTTTACAGAACAAATAAAGCTAACTTTGGGAATTGTCTTCGATAACTCATGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS GCA 90 bp | CCGACACGCCACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCATCCCAGTCCGCATCGGAAGGCTTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTRHFLAFRYRRSSN*SHRSSQSASEGLGV Trigger: GACCCCCAAGCCTTCCGATGCGGACTGGGATGACCTGTGGGAGCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGTGTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS-3UTR CAA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCCCGACACGCCACTTTTaGGCATTCAGATACCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPPTRHF*AFRYRR Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGTGTCGG...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS-3UTR CAA 90 bp | CTGTTGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTTCTGGGACAGCCCGATaGCTCGATATCCGCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLSWEPLLYLQSRTSGSGTAR*LDIRSL Trigger: GAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAGA...ACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | GAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCGGTCAGAGTGGTGCCTaGGGCAATGTCAGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ENRGWGEWRCLDTVWAHSGQSGA*GNVSTS Trigger: CGAGGTGCTGACATTGCCCAAGGCACCACTCTGACC...GCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | AGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACAAGACCTTGCCGCTCATaGTTGCGCAAGCACTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGEPRLGRMEVSRHGLGTRPCRS*LRKHFT Trigger: GGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCT...TGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | TTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCAGATGAGGTGCCCACCTCCAACTTCCTCTaGGTGACCCAGAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FYHKTPHPHSEGSSDEVPTSNFL*VTQKNS Trigger: GCTGTTCTTCTGGGTCACCAAGAGGAAGTTGGAGGT...GGGCACCTCATCTGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | GGATCTCCATCTCCAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATTGCCGCTGCCGGATATaGCCCTTCTGGATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPSPGPNQKTWPGLDLHCRCRI*PFWMEE Trigger: CTCCTCCATCCAGAAGGGCAATATCCGGCAGCGGCA...ATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTGGAGATGGAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTGTCCTGGGAGCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGTTCACCTTGGGCAATTaGATGAGTTGCTTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSCPGSLCSTSSRGHRVQFTLGN*MSCLQS Trigger: GGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAA...CTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGCTCCCAGGACAGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | GCCTTTGCTCTACCTCCAGTCGAGGACATCGGGTGCAGTCATGAGCTGTTCACAAGACCTTGCCGCTCATaGTTGCGCAAGCACTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: AFALPPVEDIGCSHELFTRPCRS*LRKHFT Trigger: GGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCT...TGTGAACAGCTCATGACTGCACCCGATGTCCTCGACTGGAGGTAGAGCAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS TCA 90 bp | CCATCCTCGGTGCTGTCACCAAACATGTCTGTATCCAGGCAGAGGTaGGATGCTATGTGCTCAATTCGGGCACCAGTCTTGGTCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSVLSPNMSVSRQR*DAMCSIRAPVLVHS Trigger: GCTATGGACCAAGACTGGTGCCCGAATTGAGCACATAGCATCTCACCTCTGCCTGGATACAGACATGTTTGGTGACAGCACCGAGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS CCA 90 bp | GTCCGTGCAATACACAAGCAGCGAACATCTCTTATGACGTGTGTCTaGGACAGCCCGATTGCTCGATATCCGCTCACTCTCCCGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRAIHKQRTSLMTCV*DSPIARYPLTLPLV Trigger: AACCAACGGGAGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAGACACACGTCATAAGAGATGTTCGCTGCTTGTGTATTGCACGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | GAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGTGTCTACCGACACGCCACTTTTaGGCATTCAGATACCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ERKDTEGENRGWGEWRCLPTRHF*AFRYRR Trigger: GCGGCGGTATCTGAATGCCAAAAAGTGGCGTGTCGG...TAGACACCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCATTCATTCTACCACAAGACGCCCCACCCACATTCAGAGGGGAGCTCACCTTGCCGCTCATTGTaGCGCAAGCACTTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHSFYHKTPHPHSEGSSPCRSL*RKHFTL Trigger: CAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGG...TGAGCTCCCCTCTGAATGTGGGTGGGGCGTCTTGTGGTAGAATGAATGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS TCA 90 bp | CTGGGACAGCCCGATTGCTCGATATCCGCTCACTCTCCCGTTGGTTaGAAGCATACAGTTTGTAGGGATCATCACCGACACGCCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGQPDCSISAHSPVG*KHTVCRDHHRHATF Trigger: AAAAGTGGCGTGTCGGTGATGATCCCTACAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | AAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGTCTGGGACAGCCCGATaGCTCGATATCCGCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: KHGKERYRRGEPRLGRMESGTAR*LDIRSL Trigger: GAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAGA...CTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | AACCGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTCTCAGTCCTCGGGGTCATaGCTAAAGTCATCCACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: NRGWGEWRCLDTVWAHSSQSSGS*LKSSTN Trigger: ATTAGTGGATGACTTTAGCAATGACCCCGAGGACTG...AGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | AACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGGCCTTGCCGCTCATTGTaGCGCAAGCACTTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NMERKDTEGENRGWGEWRPCRSL*RKHFTL Trigger: CAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGG...CCTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS CCA 90 bp | CCAGGCAGAGGTGAGATGCTATGTGCTCAATTCGGGCACCAGTCTTaGTCCATAGCTGCCTTTCATCCCCATTCTTGCATAGAGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRGEMLCAQFGHQS*SIAAFHPHSCIEQE Trigger: TTCTTGCTCTATGCAAGAATGGGGATGAAAGGCAGCTATGGACCAAGACTGGTGCCCGAATTGAGCACATAGCATCTCACCTCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | AAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGGGAGAATGGAGACCTCCAACTTCCTCTaGGTGACCCAGAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHGKERYRRGEPRLGRMETSNFL*VTQKNS Trigger: GCTGTTCTTCTGGGTCACCAAGAGGAAGTTGGAGGT...CTCCATTCTCCCCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | TGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCAGCTCTGAAGTGTCTTGGTCAGAGTGGTGCCTaGGGCAATGTCAGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CKPSTLQNMYIFPALKCLGQSGA*GNVSTS Trigger: CGAGGTGCTGACATTGCCCAAGGCACCACTCTGACC...AAGACACTTCAGAGCTGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | GAAAGGGTACAACAAACACTTCCCATCGGATCTCCATCTCCAGGTCCCAATCAGTTTGCTCCATCTCCTTaGACCTTGGCACAGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ERVQQTLPIGSPSPGPNQFAPSP*TLAQGL Trigger: AAGTCCCTGTGCCAAGGTCAAAGGAGATGGAGCAAA...CTGATTGGGACCTGGAGATGGAGATCCGATGGGAAGTGTTTGTTGTACCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | CGAGGTTGGGGAGAATGGAGGTGTCTAGACACGGTCTGGGCACATAGCTCTATCACTTCAGCTGTCCTCTaGGTGTTCTTTATATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGWGEWRCLDTVWAHSSITSAVL*VFFIYV Trigger: CACATATATAAAGAACACCAAGAGGACAGCTGAAGT...GATAGAGCTATGTGCCCAGACCGTGTCTAGACACCTCCATTCTCCCCAACCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGGTGTAAACATGGAAAGGAAAGATACAGAAGGGGAGAACCGAGGTTGGTTCACCTTGGGCAATTaGATGAGTTGCTTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVGVNMERKDTEGENRGWFTLGN*MSCLQS Trigger: GGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAA...CCAACCTCGGTTCTCCCCTTCTGTATCTTTCCTTTCCATGTTTACACCTACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
||
| CDS-3UTR CAA 90 bp | TGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCAGCTCTGAAGTGTCTTCCGCTCACTCTCCCGTaGGTTGAAAGCATACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CKPSTLQNMYIFPALKCLPLTLP*VESIQF Trigger: AAACTGTATGCTTTCAACCAACGGGAGAGTGAGCGG...AAGACACTTCAGAGCTGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCCAATCAGAAAACCTGGCCAGGACTGGACCTTCATAATATTGCACACAACTTCAGCTGTCCTCTaGGTGTTCTTTATATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVPIRKPGQDWTFIILHTTSAVL*VFFIYV Trigger: CACATATATAAAGAACACCAAGAGGACAGCTGAAGT...TGTGTGCAATATTATGAAGGTCCAGTCCTGGCCAGGTTTTCTGATTGGGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS-3UTR CAA 90 bp | GTTGAAACTGAAGTTTGCAAGCCAAGCACTTTGCAAAATATGTACATCTTCCCACAGTCCTCGGGGTCATaGCTAAAGTCATCCACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VETEVCKPSTLQNMYIFPQSSGS*LKSSTN Trigger: ATTAGTGGATGACTTTAGCAATGACCCCGAGGACTG...TGGGAAGATGTACATATTTTGCAAAGTGCTTGGCTTGCAAACTTCAGTTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS GCA 72 bp | AGGTCATCCCAGTCCGCATCGGAAGGCTTGGGGGTCTaGACTTCGGGTCCCAGCGGCACCTCCAACTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSQSASEGLGV*TSGPSGTSNFL Trigger: GAGGAAGTTGGAGGTGCCGCTGGGACCCGAAGTGCAGACCCCCAAGCCTTCCGATGCGGACTGGGATGACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS GCA 72 bp | CGGATGGGCTCAGTAGGGTCTAGGCGCAAAGCTTTCTaGTCCAGGGAGAGCTGCTCCCACTGGAAGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMGSVGSRRKAF*SRESCSHWKCR Trigger: CCTGCACTTCCAGTGGGAGCAGCTCTCCCTGGAGCAGAAAGCTTTGCGCCTAGACCCTACTGAGCCCATCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 90 bp | TTGGGGGTCTGCACTTCGGGTCCCAGCGGCACCTCCAACTTCCTCTaGGTGACCCAGAAGAACAGCAGTACGGTGATCCAGAGCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGVCTSGPSGTSNFL*VTQKNSSTVIQSTP Trigger: TGGGGTGCTCTGGATCACCGTACTGCTGTTCTTCTGGGTCACCAAGAGGAAGTTGGAGGTGCCGCTGGGACCCGAAGTGCAGACCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CCA 72 bp | TCACAATGGCTGTCCAGGAAGGTCAGAGTGGTGCCTTaGGCAATGTCAGCACCTCGCATCCGAGACCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SQWLSRKVRVVP*AMSAPRIRDRT Trigger: GGTCCGGTCTCGGATGCGAGGTGCTGACATTGCCCAAGGCACCACTCTGACCTTCCTGGACAGCCATTGTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CCA 72 bp | CGGATTAGGATCCTCCGCCGGCAGCACTGTGTCACGTaGGAGTTTCCAAAGGGTCTCTCCAGGGCAAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RIRILRRQHCVT*EFPKGLSRAKG Trigger: GCCTTTTGCCCTGGAGAGACCCTTTGGAAACTCCCACGTGACACAGTGCTGCCGGCGGAGGATCCTAATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112591.3 |
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| CDS CAA 90 bp | GGGGGCACCAGGAAACAGGGTGACCACGGACAGGCACAGCTCTTCTaGGATGATCTGCTGGGTGTATGTGAAGGCCCACACCTGAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GGTRKQGDHGQAQLF*DDLLGVCEGPHLRL Trigger: AAGTCTCAGGTGTGGGCCTTCACATACACCCAGCAGATCATCCAAGAAGAGCTGTGCCTGTCCGTGGTCACCCTGTTTCCTGGTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS CAA 72 bp | TGCACTTCGGGTCCCAGCGGCACCTCCAACTTCCTCTaGGTGACCCAGAAGAACAGCAGTACGGTGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CTSGPSGTSNFL*VTQKNSSTVIQ Trigger: CTGGATCACCGTACTGCTGTTCTTCTGGGTCACCAAGAGGAAGTTGGAGGTGCCGCTGGGACCCGAAGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CAA 72 bp | TCCCAGTGCTGGCTCATGAGCGACGACTCACAAGGGTaGACAACGACCTCCTTGCCATCCTCGGTGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQCWLMSDDSQG*TTTSLPSSVLS Trigger: TGACAGCACCGAGGATGGCAAGGAGGTCGTTGTCAACCCTTGTGAGTCGTCGCTCATGAGCCAGCACTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS CAA 72 bp | CCTCGCATCCGAGACCGGACCAGACCTTGCCGCTCATaGTTGCGCAAGCACTTCACCTTGGGCAATTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PRIRDRTRPCRS*LRKHFTLGNLM Trigger: CATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCTGGTCCGGTCTCGGATGCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 90 bp | TGCTGGCTCATGAGCGACGACTCACAAGGGTTGACAACGACCTCCTaGCCATCCTCGGTGCTGTCACCAAACATGTCTGTATCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CWLMSDDSQGLTTTS*PSSVLSPNMSVSRQ Trigger: CTGCCTGGATACAGACATGTTTGGTGACAGCACCGAGGATGGCAAGGAGGTCGTTGTCAACCCTTGTGAGTCGTCGCTCATGAGCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS CAA 90 bp | CTCACAATGTCCCAGTGCTGGCTCATGAGCGACGACTCACAAGGGTaGACAACGACCTCCTTGCCATCCTCGGTGCTGTCACCAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: LTMSQCWLMSDDSQG*TTTSLPSSVLSPNM Trigger: CATGTTTGGTGACAGCACCGAGGATGGCAAGGAGGTCGTTGTCAACCCTTGTGAGTCGTCGCTCATGAGCCAGCACTGGGACATTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS GCA 72 bp | CACTTTTTGGCATTCAGATACCGCCGCTCATCAAACTaGTCCCACAGGTCATCCCAGTCCGCATCGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HFLAFRYRRSSN*SHRSSQSASEG Trigger: GCCTTCCGATGCGGACTGGGATGACCTGTGGGAGCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CAA 72 bp | CGCATCCGAGACCGGACCAGACCTTGCCGCTCATTGTaGCGCAAGCACTTCACCTTGGGCAATTTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RIRDRTRPCRSL*RKHFTLGNLMS Trigger: ACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCTGGTCCGGTCTCGGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CAA 90 bp | GACCGGACCAGACCTTGCCGCTCATTGTTGCGCAAGCACTTCACCTaGGGCAATTTGATGAGTTGCTTGCAGTCCTCGGGGTCATTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DRTRPCRSLLRKHFT*GNLMSCLQSSGSLL Trigger: TAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCTGGTCCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS TCA 72 bp | CAATCACAGGGCACACAACCCTTGTGTAGTCCTCTTTaGCCCTGTGTAACAGGGGCTGCAGCCAATCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QSQGTQPLCSPL*PCVTGAAANPC Trigger: ACAGGGATTGGCTGCAGCCCCTGTTACACAGGGTCAAAGAGGACTACACAAGGGTTGTGTGCCCTGTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CAA 72 bp | AGACCTTGCCGCTCATTGTTGCGCAAGCACTTCACCTaGGGCAATTTGATGAGTTGCTTGCAGTCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPCRSLLRKHFT*GNLMSCLQSSG Trigger: CCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 90 bp | TGTGTCTGGGACAGCCCGATTGCTCGATATCCGCTCACTCTCCCGTaGGTTGAAAGCATACAGTTTGTAGGGATCATCACCGACACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CVWDSPIARYPLTLP*VESIQFVGIITDTP Trigger: TGGCGTGTCGGTGATGATCCCTACAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 90 bp | AGACCTTGCCGCTCATTGTTGCGCAAGCACTTCACCTTGGGCAATTaGATGAGTTGCTTGCAGTCCTCGGGGTCATTGCTAAAGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RPCRSLLRKHFTLGN*MSCLQSSGSLLKSS Trigger: GGATGACTTTAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCGGCAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS TCA 72 bp | CCCGATTGCTCGATATCCGCTCACTCTCCCGTTGGTTaGAAGCATACAGTTTGTAGGGATCATCACCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PDCSISAHSPVG*KHTVCRDHHRH Trigger: GTGTCGGTGATGATCCCTACAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCGGATATCGAGCAATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS TCA 72 bp | AGGTCCGTGCAATACACAAGCAGCGAACATCTCTTATaGCGTGTGTCTGGGACAGCCCGATTGCTCGATATC | + |
|
Preference number: 6 (lower is better) Translates to: RSVQYTSSEHLL*RVSGTARLLDI Trigger: GATATCGAGCAATCGGGCTGTCCCAGACACACGTCATAAGAGATGTTCGCTGCTTGTGTATTGCACGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS TCA 72 bp | GAAGTGCAGGCTCCAGTCAAAGCCCCCTCTGAGCTCTaGGGCAGACTCAATATAGTTGAAGGTATCCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EVQAPVKAPSEL*GRLNIVEGIQV Trigger: AACCTGGATACCTTCAACTATATTGAGTCTGCCTCAGAGCTCAGAGGGGGCTTTGACTGGAGCCTGCACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS GCA 72 bp | GTCACCAAACATGTCTGTATCCAGGCAGAGGTGAGATaGTATGTGCTCAATTCGGGCACCAGTCTTGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTKHVCIQAEVR*YVLNSGTSLGP Trigger: TGGACCAAGACTGGTGCCCGAATTGAGCACATAGCATCTCACCTCTGCCTGGATACAGACATGTTTGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS CCA 72 bp | ACAGTTTGTAGGGATCATCACCGACACGCCACTTTTTaGCATTCAGATACCGCCGCTCATCAAACTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TVCRDHHRHATF*HSDTAAHQTAP Trigger: GGGAGCAGTTTGATGAGCGGCGGTATCTGAATGCCAAAAAGTGGCGTGTCGGTGATGATCCCTACAAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CCA 72 bp | ATACACAAGCAGCGAACATCTCTTATGACGTGTGTCTaGGACAGCCCGATTGCTCGATATCCGCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IHKQRTSLMTCV*DSPIARYPLTL Trigger: GAGAGTGAGCGGATATCGAGCAATCGGGCTGTCCCAGACACACGTCATAAGAGATGTTCGCTGCTTGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 72 bp | GACAGCCCGATTGCTCGATATCCGCTCACTCTCCCGTaGGTTGAAAGCATACAGTTTGTAGGGATCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: DSPIARYPLTLP*VESIQFVGIIT Trigger: GGTGATGATCCCTACAAACTGTATGCTTTCAACCAACGGGAGAGTGAGCGGATATCGAGCAATCGGGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS CAA 72 bp | CGCTCATTGTTGCGCAAGCACTTCACCTTGGGCAATTaGATGAGTTGCTTGCAGTCCTCGGGGTCATTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RSLLRKHFTLGN*MSCLQSSGSLL Trigger: TAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAACAATGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS GCA 72 bp | TTGCGCAAGCACTTCACCTTGGGCAATTTGATGAGTTaGTTGCAGTCCTCGGGGTCATTGCTAAAGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LRKHFTLGNLMS*LQSSGSLLKSS Trigger: GGATGACTTTAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
||
| CDS GCA 72 bp | ATGTGCTCAATTCGGGCACCAGTCTTGGTCCATAGCTaGCTTTCATCCCCATTCTTGCATAGAGCAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: MCSIRAPVLVHS*LSSPFLHRART Trigger: GGTTCTTGCTCTATGCAAGAATGGGGATGAAAGGCAGCTATGGACCAAGACTGGTGCCCGAATTGAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
||
| CDS CCA 72 bp | GGTGAGATGCTATGTGCTCAATTCGGGCACCAGTCTTaGTCCATAGCTGCCTTTCATCCCCATTCTTGCATA | + |
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Preference number: 6 (lower is better) Translates to: GEMLCAQFGHQS*SIAAFHPHSCI Trigger: TATGCAAGAATGGGGATGAAAGGCAGCTATGGACCAAGACTGGTGCCCGAATTGAGCACATAGCATCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024858.12 |
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| CDS CAA 72 bp | CGCAAGCACTTCACCTTGGGCAATTTGATGAGTTGCTaGCAGTCCTCGGGGTCATTGCTAAAGTCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: RKHFTLGNLMSC*QSSGSLLKSST Trigger: AGTGGATGACTTTAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CAA 72 bp | GTTGCGCAAGCACTTCACCTTGGGCAATTTGATGAGTaGCTTGCAGTCCTCGGGGTCATTGCTAAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: VAQALHLGQFDE*LAVLGVIAKVI Trigger: GATGACTTTAGCAATGACCCCGAGGACTGCAAGCAACTCATCAAATTGCCCAAGGTGAAGTGCTTGCGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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| CDS CCA 72 bp | CTTCAGCTGTCCTCTTGGTGTTCTTTATATATGTGTTaGCGTTCCCATCGGGGAAAACATAAGGATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LQLSSWCSLYMC*RSHRGKHKDAF Trigger: AAAAGCATCCTTATGTTTTCCCCGATGGGAACGCCAACACATATATAAAGAACACCAAGAGGACAGCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024858.12 ENSMUST00000112591.3 |
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