Pregenerated sensors for GALNT13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060988Ensembl transcript IDs: ENSMUST00000068595.6, ENSMUST00000112634.8, ENSMUST00000112635.8, ENSMUST00000112636.8, ENSMUST00000136642.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCAAACTACTTGCCACTGATGTACGGTATTCTATTGTTCTGCTaGAGGTTTTCTTCTATTACCTGTGGTCTTAGTTTATTGAACAAG | + |
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Preference number: 1 (lower is better) Translates to: SSNYLPLMYGILLFC*RFSSITCGLSLLNK Trigger: CTTGTTCAATAAACTAAGACCACAGGTAATAGAAGAAAACCTGCAGCAGAACAATAGAATACCGTACATCAGTGGCAAGTAGTTTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR GCA 90 bp | CTTTCCTCAAACTACTTGCCACTGATGTACGGTATTCTATTGTTCTaGTGCAGGTTTTCTTCTATTACCTGTGGTCTTAGTTTATTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LSSNYLPLMYGILLF*CRFSSITCGLSLLN Trigger: GTTCAATAAACTAAGACCACAGGTAATAGAAGAAAACCTGCAGCAGAACAATAGAATACCGTACATCAGTGGCAAGTAGTTTGAGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR TCA 90 bp | TTCAAGAAGTGTAGTTACAATAAGCAAAGAGATAGCATGAGAAGGTaGGCACAGCCAGTGGACAAAAATAATGTAGACTCTGCCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: FKKCSYNKQRDSMRR*AQPVDKNNVDSAFK Trigger: TTTAAAGGCAGAGTCTACATTATTTTTGTCCACTGGCTGTGCTCACCTTCTCATGCTATCTCTTTGCTTATTGTAACTACACTTCTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR TCA 90 bp | TTGAATCAACAGATAAAATGCAAACGCAATGGCAATGATTATGCTTaGTCACTTCTTAAATGGAGTAGCAATCTATGTTGGAGCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LNQQIKCKRNGNDYA*SLLKWSSNLCWSKA Trigger: TGCCTTGCTCCAACATAGATTGCTACTCCATTTAAGAAGTGATCAAGCATAATCATTGCCATTGCGTTTGCATTTTATCTGTTGATTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAGGAGCAACCCACAATaGTTGTGGCCCCAAATTGTT | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALRSNPQ*LWPQIV Trigger: AACAATTTGGGGCCACAACCATTGTGGGTTGCTCCT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTGGGCAAAGATACAGCTaGTGGACAAAAACTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DWELVHEDNLAGEEIQEIGQRYS*WTKTLC Trigger: ACAGAGAGTTTTTGTCCATCAGCTGTATCTTTGCCC...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGGATCAGTGGCCGTGTaGTTACTTAACAAAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALGSVAV*LLNKDV Trigger: CACATCTTTGTTAAGTAAGCACACGGCCACTGATCC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAAGCATCAGTTCCTCTTaGTTGAGGGGCAAACACCTA | + |
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Preference number: 2 (lower is better) Translates to: AGFSEVHKASNKELTQCSSISSS*LRGKHL Trigger: TAGGTGTTTGCCCCTCAACCAAGAGGAACTGATGCT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAGCAAAGAGATAGCATaGGAAGGTGAGCACAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKSKEIA*EGEHSQ Trigger: CTGGCTGTGCTCACCTTCTCATGCTATCTCTTTGCT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGAGCATCAGTTCCTCTTaGTTGAGGGGCAAACACCTA | + |
|
Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWSISSS*LRGKHL Trigger: TAGGTGTTTGCCCCTCAACCAAGAGGAACTGATGCT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGAGGAGCAACCCACAATaGTTGTGGCCCCAAATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWRSNPQ*LWPQIV Trigger: AACAATTTGGGGCCACAACCATTGTGGGTTGCTCCT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTAGCTTGTGTTCAGAATaGAGATTCTTTCACAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: DWELVHEDNLAGEEIQEISLCSE*RFFHSN Trigger: GTTGCTGTGAAAGAATCTTCATTCTGAACACAAGCT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGGGACAACCTGGCTGGTaGGGAAATTCAAGAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWGQPGW*GNSRNS Trigger: AGAATTTCTTGAATTTCCTCACCAGCCAGGTTGTCC...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGACAAATCTCACCCTCTaGAGTGAAGGGCAAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWTNLTL*SEGQRY Trigger: GTATCTTTGCCCTTCACTCCAGAGGGTGAGATTTGT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAGTGGTTATTTAGCTTaGAATCAGCATCAGTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALSGYLA*NQHQFL Trigger: GAGGAACTGATGCTGATTCCAAGCTAAATAACCACT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR CAA 90 bp | TTATCACTTGATTTTGGGGACAAAGTCTCTCATTTGATTGGGAGCTaGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: LSLDFGDKVSHLIGS*SMRTTWLVRKFKKF Trigger: GAATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATGAGAGACTTTGTCCCCAAAATCAAGTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAAGCTTGTGTTCAGAATaGAGATTCTTTCACAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: AGFSEVHKASNKELTQCSSLCSE*RFFHSN Trigger: GTTGCTGTGAAAGAATCTTCATTCTGAACACAAGCT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGGGCAAAGATACAGCTaGTGGACAAAAACTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKGQRYS*WTKTLC Trigger: ACAGAGAGTTTTTGTCCATCAGCTGTATCTTTGCCC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAAAGACATTATCACTTaGTTTTGGGGACAAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALKDIIT*FWGQSL Trigger: GAGACTTTGTCCCCAAAATCAAGTGATAATGTCTTT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACATATAATTAGTCCATaGACTGTGAACAAAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALHIISP*TVNKGV Trigger: AACCCCTTTGTTCACAGTGCATGGACTAATTATATG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACCAGAAGGTGAAACATaGATTTGTTCTGATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALPEGET*ICSDEK Trigger: TTTCTCATCAGAACAAATGCATGTTTCACCTTCTGG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCAAAAACTCTCTGTATaGAGACAGGGAGAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKQKLSV*RQGETG Trigger: CCCAGTTTCTCCCTGTCTCCATACAGAGAGTTTTTG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGACAAATCTCACCCTCTaGAGTGAAGGGCAAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKTNLTL*SEGQRY Trigger: GTATCTTTGCCCTTCACTCCAGAGGGTGAGATTTGT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAGAATCAGTGAAAAATaGAGAGAGAGGAGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VFIGTDGLILRASCRSALRISEK*RERREK Trigger: TTTCTCTCTCCTCTCTCTCCATTTTTCACTGATTCT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGTGGCCAAGTGTGTGTTaGTGTATGAGACTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKWPSVC*CMRLEE Trigger: TTCTTCCAGTCTCATACACCAACACACACTTGGCCA...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAGCAAGGCAATGTTCTaGAGTTTGCTGAAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKSKAMF*SLLKQF Trigger: GAATTGCTTCAGCAAACTTCAGAACATTGCCTTGCT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTATTCTTTTTATAGAATaGAAAGTGCCAATGACCGCA | + |
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Preference number: 2 (lower is better) Translates to: DWELVHEDNLAGEEIQEIILFIE*KVPMTA Trigger: TGCGGTCATTGGCACTTTGCATTCTATAAAAAGAAT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTATGGATTCTAATTGTTaGCATAGAAATTCAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: DWELVHEDNLAGEEIQEIMDSNC*HRNSTR Trigger: CCTGGTTGAATTTCTATGCCAACAATTAGAATCCAT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATACAAATCTCACCCTCTaGAGTGAAGGGCAAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNTNLTL*SEGQRY Trigger: GTATCTTTGCCCTTCACTCCAGAGGGTGAGATTTGT...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGAGTGGTTATTTAGCTTaGAATCAGCATCAGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWSGYLA*NQHQFL Trigger: GAGGAACTGATGCTGATTCCAAGCTAAATAACCACT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAGCTTGTGTTCAGAATaGAGATTCTTTCACAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKSLCSE*RFFHSN Trigger: GTTGCTGTGAAAGAATCTTCATTCTGAACACAAGCT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATAATGACCGCACTGACTaGACTAAAAGGGATAGTACT | + |
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Preference number: 2 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNNDRTD*TKRDST Trigger: AGTACTATCCCTTTTAGTTCAGTCAGTGCGGTCATT...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGTGTGTGTTGGTGTATaGGACTGGAAGAAATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKVCVGV*DWKKLK Trigger: TTTCAATTTCTTCCAGTCTCATACACCAACACACAC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCAAACGCAATGGCAATaGTTATGCTTGATCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKQTQWQ*LCLITS Trigger: AGAAGTGATCAAGCATAATCATTGCCATTGCGTTTG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAATTCTTTTTATAGAATaGAAAGTGCCAATGACCGCA | + |
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Preference number: 2 (lower is better) Translates to: AGFSEVHKASNKELTQCSILFIE*KVPMTA Trigger: TGCGGTCATTGGCACTTTGCATTCTATAAAAAGAAT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGCATATAATTAGTCCATaGACTGTGAACAAAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWHIISP*TVNKGV Trigger: AACCCCTTTGTTCACAGTGCATGGACTAATTATATG...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAATTCTATTGTTCTGCTaGAGGTTTTCTTCTATTACC | + |
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Preference number: 2 (lower is better) Translates to: AGFSEVHKASNKELTQCSILLFC*RFSSIT Trigger: GGTAATAGAAGAAAACCTGCAGCAGAACAATAGAAT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGTGGCCCCAAATTGTTaGTTTGCTGTTATATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKVAPNC*FAVICQ Trigger: TTGACATATAACAGCAAACCAACAATTTGGGGCCAC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAAGGAGCAACCCACAATaGTTGTGGCCCCAAATTGTT | + |
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Preference number: 2 (lower is better) Translates to: INKCDYMAKCVLVYETGRRSNPQ*LWPQIV Trigger: AACAATTTGGGGCCACAACCATTGTGGGTTGCTCCT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAATAAATGTGATTATATaGCCAAGTGTGTGTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AGFSEVHKASNKELTQCSINVII*PSVCWC Trigger: ACACCAACACACACTTGGCCATATAATCACATTTAT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCTAAGTCACCCAACATaGGAGAATGATTCATTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKLSHPT*ENDSLY Trigger: GTACAATGAATCATTCTCCCATGTTGGGTGACTTAG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAGGACAACCTGGCTGGTaGGGAAATTCAAGAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: INKCDYMAKCVLVYETGRGQPGW*GNSRNS Trigger: AGAATTTCTTGAATTTCCTCACCAGCCAGGTTGTCC...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGACAAAAGACTGTATTaGATCACTACTTTCTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKDKRLY*ITTFSW Trigger: CCATGAGAAAGTAGTGATGCAATACAGTCTTTTGTC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGATGGATTCTAATTGTTaGCATAGAAATTCAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWMDSNC*HRNSTR Trigger: CCTGGTTGAATTTCTATGCCAACAATTAGAATCCAT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACAAAAACTCTCTGTATaGAGACAGGGAGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: INKCDYMAKCVLVYETGRQKLSV*RQGETG Trigger: CCCAGTTTCTCCCTGTCTCCATACAGAGAGTTTTTG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAGAATCAGTGAAAAATaGAGAGAGAGGAGAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVTTVILKRDGPYTTQRKRISEK*RERREK Trigger: TTTCTCTCTCCTCTCTCTCCATTTTTCACTGATTCT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGATAAATGTGATTATATaGCCAAGTGTGTGTTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWINVII*PSVCWC Trigger: ACACCAACACACACTTGGCCATATAATCACATTTAT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR CAA 90 bp | ATGAGACTGGAAGAAATTGAAATAAGCAAAAGAATAATCTTAGATTaGCTCAGAGAGATAGGAATGAGAGACTACAGGCAGGACAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: MRLEEIEISKRIILD*LREIGMRDYRQDKH Trigger: ATGCTTGTCCTGCCTGTAGTCTCTCATTCCTATCTCTCTGAGCAAATCTAAGATTATTCTTTTGCTTATTTCAATTTCTTCCAGTCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAATGGATTCTAATTGTTaGCATAGAAATTCAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: INKCDYMAKCVLVYETGRMDSNC*HRNSTR Trigger: CCTGGTTGAATTTCTATGCCAACAATTAGAATCCAT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | TGTATGGAGACAGGGAGAAACTGGGGATTCAGGTCCTaGTATCACACCTCAGAGCAAGACCGTCTTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CMETGRNWGFRS*YHTSEQDRLQL Trigger: AAGCTGAAGACGGTCTTGCTCTGAGGTGTGATATCAGGACCTGAATCCCCAGTTTCTCCCTGTCTCCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACATTTGATTGGGAGCTaGTCCATGAGGACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VFIGTDGLILRASCRSALHLIGS*SMRTTW Trigger: CCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCACATTTGATTGGGAGCTaGTCCATGAGGACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AGFSEVHKASNKELTQCSHLIGS*SMRTTW Trigger: CCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATG...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAATGGCCAAGTGTGTGTaGGTGTATGAGACTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VFIGTDGLILRASCRSALMAKCV*VYETGR Trigger: TCTTCCAGTCTCATACACCAACACACACTTGGCCAT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | CAGTTCCTCTTGGTTGAGGGGCAAACACCTACTGAGTaGGCAAGCCCTTATCCCAGTTTCATAGTTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: QFLLVEGQTPTE*ASPYPSFIVLT Trigger: AGTCAAAACTATGAAACTGGGATAAGGGCTTGCTCACTCAGTAGGTGTTTGCCCCTCAACCAAGAGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGGTTGTGGCCCCAAATaGTTGGTTTGCTGTTATATG | + |
|
Preference number: 3 (lower is better) Translates to: VFIGTDGLILRASCRSALGCGPK*LVCCYM Trigger: CATATAACAGCAAACCAACAATTTGGGGCCACAACC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR GCA 72 bp | TCTGCCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTaGTTACTTAACAAAGATGTGGCCCTGGCTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SAFKRISGSVAV*LLNKDVALALK Trigger: TTTCAGAGCCAGGGCCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCATTTGATTGGGAGCTaGTCCATGAGGACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKHLIGS*SMRTTW Trigger: CCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTATGTGGCCCCAAATTGTaGGTTTGCTGTTATATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VFIGTDGLILRASCRSALCGPKL*VCCYMS Trigger: TGACATATAACAGCAAACCAACAATTTGGGGCCACA...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGTTGCCTTTGCACAGTaGAATTTCTGCTGCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKVAFAQ*NFCCPA Trigger: AGCTGGGCAGCAGAAATTCAACTGTGCAAAGGCAAC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | GACACTGGGAAGCCTAGAGATATTTGCTGGTTTCTCTaGAGTCCACAAAGCTTCAAACAAAGAACTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: DTGKPRDICWFL*SPQSFKQRTHP Trigger: TGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGCAAATATCTCTAGGCTTCCCAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGGGTTGTGGCCCCAAATaGTTGGTTTGCTGTTATATG | + |
|
Preference number: 3 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWGCGPK*LVCCYM Trigger: CATATAACAGCAAACCAACAATTTGGGGCCACAACC...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAACAGTAAAACAGACTaGTTTGGCAGCCAGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: VFIGTDGLILRASCRSALNSKTD*FGSQNN Trigger: ATTGTTCTGGCTGCCAAACAAGTCTGTTTTACTGTT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGATGGCCAAGTGTGTGTaGGTGTATGAGACTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKMAKCV*VYETGR Trigger: TCTTCCAGTCTCATACACCAACACACACTTGGCCAT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGTGTGGCCCCAAATTGTaGGTTTGCTGTTATATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWCGPKL*VCCYMS Trigger: TGACATATAACAGCAAACCAACAATTTGGGGCCACA...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCACATTATCACTTGATTTaGGGGACAAAGTCTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AGFSEVHKASNKELTQCSHYHLI*GTKSLI Trigger: AATGAGAGACTTTGTCCCCAAAATCAAGTGATAATG...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGGTATGTGTATATGTTaGTTGAGTGTTTTGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AGFSEVHKASNKELTQCSGMCIC*LSVLFW Trigger: CCAGAACAAAACACTCAACAAACATATACACATACC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGTTACTGTCCCATGAATaGGTAGGTTTTCCTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWLLSHE*VGFPFS Trigger: TGAAAAAGGAAAACCTACCAATTCATGGGACAGTAA...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAACAGTAAAACAGACTaGTTTGGCAGCCAGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKNSKTD*FGSQNN Trigger: ATTGTTCTGGCTGCCAAACAAGTCTGTTTTACTGTT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | CCTCAGAGCAAGACCGTCTTCAGCTTGTGTTCAGAATaGAGATTCTTTCACAGCAACTCTTGTAGTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PQSKTVFSLCSE*RFFHSNSCSLY Trigger: ATATAAACTACAAGAGTTGCTGTGAAAGAATCTTCATTCTGAACACAAGCTGAAGACGGTCTTGCTCTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | AAGAGATGGTCCCTACACCACTCAAAGAAAGTCGTGTaGCAATGGATTCTTGTTTCTCTCTTGAGCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: KRWSLHHSKKVV*QWILVSLLSYF Trigger: AAAATAGCTCAAGAGAGAAACAAGAATCCATTGTCACACGACTTTCTTTGAGTGGTGTAGGGACCATCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR GCA 72 bp | GCAACCCACAATGGTTGTGGCCCCAAATTGTTGGTTTaGTGTTATATGTCAAAGATAGCATCAAGTTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATHNGCGPKLLV*CYMSKIASSYF Trigger: AAAGTAACTTGATGCTATCTTTGACATATAACAGCAAACCAACAATTTGGGGCCACAACCATTGTGGGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGTTACTGTCCCATGAATaGGTAGGTTTTCCTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKLLSHE*VGFPFS Trigger: TGAAAAAGGAAAACCTACCAATTCATGGGACAGTAA...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCATTATCACTTGATTTaGGGGACAAAGTCTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKHYHLI*GTKSLI Trigger: AATGAGAGACTTTGTCCCCAAAATCAAGTGATAATG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGGTATGTGTATATGTTaGTTGAGTGTTTTGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVTTVILKRDGPYTTQRKGMCIC*LSVLFW Trigger: CCAGAACAAAACACTCAACAAACATATACACATACC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | TGTAGTTACAATAAGCAAAGAGATAGCATGAGAAGGTaGGCACAGCCAGTGGACAAAAATAATGTAGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSYNKQRDSMRR*AQPVDKNNVDS Trigger: AGAGTCTACATTATTTTTGTCCACTGGCTGTGCTCACCTTCTCATGCTATCTCTTTGCTTATTGTAACTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | TCAAGAAGTGTAGTTACAATAAGCAAAGAGATAGCATaGGAAGGTGAGCACAGCCAGTGGACAAAAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: SRSVVTISKEIA*EGEHSQWTKIM Trigger: CATTATTTTTGTCCACTGGCTGTGCTCACCTTCTCATGCTATCTCTTTGCTTATTGTAACTACACTTCTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR CCA 72 bp | ATTTCTTATGATTTAGTCAGAAGGAGCAACCCACAATaGTTGTGGCCCCAAATTGTTGGTTTGCTGTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: ISYDLVRRSNPQ*LWPQIVGLLLY Trigger: ATATAACAGCAAACCAACAATTTGGGGCCACAACCATTGTGGGTTGCTCCTTCTGACTAAATCATAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | TGGAGTAGCAATCTATGTTGGAGCAAGGCAATGTTCTaGAGTTTGCTGAAGCAATTCTACTGTATTTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: WSSNLCWSKAMF*SLLKQFYCIYN Trigger: GTTATAAATACAGTAGAATTGCTTCAGCAAACTTCAGAACATTGCCTTGCTCCAACATAGATTGCTACTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAAACAGTAAAACAGACTaGTTTGGCAGCCAGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: INKCDYMAKCVLVYETGRNSKTD*FGSQNN Trigger: ATTGTTCTGGCTGCCAAACAAGTCTGTTTTACTGTT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | CAGATAAAATGCAAACGCAATGGCAATGATTATGCTTaGTCACTTCTTAAATGGAGTAGCAATCTATGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QIKCKRNGNDYA*SLLKWSSNLCW Trigger: CCAACATAGATTGCTACTCCATTTAAGAAGTGATCAAGCATAATCATTGCCATTGCGTTTGCATTTTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR TCA 72 bp | GACTGTATTGCATCACTACTTTCTCATGGGGATTTTTaGATGCAGAGTCAATGGAAATTTGCTTTAGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: DCIASLLSHGDF*MQSQWKFALEC Trigger: ACATTCTAAAGCAAATTTCCATTGACTCTGCATTCAAAAATCCCCATGAGAAAGTAGTGATGCAATACAGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGCCATTGTTGGGATCTaGTGCCACTGCAGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALAIVGI*CHCSPA Trigger: TGCAGGACTGCAGTGGCAGCAGATCCCAACAATGGC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACTCAGCAGCCATTGTTaGGATCTGCTGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALLSSHC*DLLPLQ Trigger: CTGCAGTGGCAGCAGATCCCAACAATGGCTGCTGAG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTATGACCTGTCCTTTTaGAGCTGCTGCTCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIYDLSF*SCCSSE Trigger: CTCCGAGGAGCAGCAGCTTCAAAAGGACAGGTCATA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACTGCCACTGCAGTCCTaGATGGTAGGCACCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALLPLQS*MVGTIL Trigger: CAAAATGGTGCCTACCATGCAGGACTGCAGTGGCAG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGCCATTGTTGGGATCTaGTGCCACTGCAGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSAIVGI*CHCSPA Trigger: TGCAGGACTGCAGTGGCAGCAGATCCCAACAATGGC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACCCACATCAGAGAAGTaGCCAGAACCACCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALPTSEK*PEPPCS Trigger: ACTGCAAGGTGGTTCTGGCCACTTCTCTGATGTGGG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCATATGACCTGTCCTTTTaGAGCTGCTGCTCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSYDLSF*SCCSSE Trigger: CTCCGAGGAGCAGCAGCTTCAAAAGGACAGGTCATA...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGCCAGCCATCCTAAGGTaGACTCGCAGTGTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWPAILR*TRSVHP Trigger: TGGATGCACACTGCGAGTGCACCTTAGGATGGCTGG...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAATTGTTGGGATCTGCTaGCACTGCAGTCCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSIVGIC*HCSPAW Trigger: CCATGCAGGACTGCAGTGGCAGCAGATCCCAACAAT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCACCCACATCAGAGAAGTaGCCAGAACCACCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSPTSEK*PEPPCS Trigger: ACTGCAAGGTGGTTCTGGCCACTTCTCTGATGTGGG...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAACCTTCTTGGTTTCTTaGAATAACAGCCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALTFLVS*NNSPQR Trigger: GCGCTGAGGGCTGTTATTTCAAGAAACCAAGAAGGT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTACCTTCTTGGTTTCTTaGAATAACAGCCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEITFLVS*NNSPQR Trigger: GCGCTGAGGGCTGTTATTTCAAGAAACCAAGAAGGT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACATCATCAACCAAGATaGCCTCAGAGAGCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALHHQPR*PQRAGS Trigger: ACTACCTGCTCTCTGAGGTCATCTTGGTTGATGATG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTCATCATCAACCAAGATaGCCTCAGAGAGCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIHHQPR*PQRAGS Trigger: ACTACCTGCTCTCTGAGGTCATCTTGGTTGATGATG...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTATCATATTCCCACAGCTaGTTTCCTCTCATGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALSYSHS*FPLMWW Trigger: CCACCACATGAGAGGAAATCAGCTGTGGGAATATGA...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTGGCCAGAACCACCTTaGAGTAGACAAATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIWPEPP*SRQISS Trigger: TGAGGAGATTTGTCTACTGCAAGGTGGTTCTGGCCA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTGGTGCACTCGCAGTGTaGATCCAGAAAAGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIGALAV*IQKSYD Trigger: GTCATAACTTTTCTGGATGCACACTGCGAGTGCACC...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCCAGCCATCCTAAGGTaGACTCGCAGTGTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKPAILR*TRSVHP Trigger: TGGATGCACACTGCGAGTGCACCTTAGGATGGCTGG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR CAA 72 bp | GATTTTGGGGACAAAGTCTCTCATTTGATTGGGAGCTaGTCCATGAGGACAACCTGGCTGGTGAGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: DFGDKVSHLIGS*SMRTTWLVRKF Trigger: GAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATGAGAGACTTTGTCCCCAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAACCTTCTTGGTTTCTTaGAATAACAGCCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSTFLVS*NNSPQR Trigger: GCGCTGAGGGCTGTTATTTCAAGAAACCAAGAAGGT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTACCATGCCGTGACAGTTaGAGATACCCACTTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALPCRDS*RYPLFH Trigger: ATGAAAAAGTGGGTATCTTCAACTGTCACGGCATGG...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCATGGCCAGAACCACCTTaGAGTAGACAAATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSWPEPP*SRQISS Trigger: TGAGGAGATTTGTCTACTGCAAGGTGGTTCTGGCCA...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGATTGTTGGGATCTGCTaGCACTGCAGTCCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKIVGIC*HCSPAW Trigger: CCATGCAGGACTGCAGTGGCAGCAGATCCCAACAAT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATCTCAGCAGCCATTGTTaGGATCTGCTGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNLSSHC*DLLPLQ Trigger: CTGCAGTGGCAGCAGATCCCAACAATGGCTGCTGAG...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGCATCATCAACCAAGATaGCCTCAGAGAGCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWHHQPR*PQRAGS Trigger: ACTACCTGCTCTCTGAGGTCATCTTGGTTGATGATG...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTCGTATCTCACCAAGTaGGTAATAACGTCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEISYLTK*VITSWD Trigger: ATCCCAAGACGTTATTACTCACTTGGTGAGATACGA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTATCGTATCTCACCAAGTaGGTAATAACGTCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALSYLTK*VITSWD Trigger: ATCCCAAGACGTTATTACTCACTTGGTGAGATACGA...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCACCATGCCGTGACAGTTaGAGATACCCACTTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSPCRDS*RYPLFH Trigger: ATGAAAAAGTGGGTATCTTCAACTGTCACGGCATGG...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGGGTGCACTCGCAGTGTaGATCCAGAAAAGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWGALAV*IQKSYD Trigger: GTCATAACTTTTCTGGATGCACACTGCGAGTGCACC...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATCTGCCACTGCAGTCCTaGATGGTAGGCACCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNLPLQS*MVGTIL Trigger: CAAAATGGTGCCTACCATGCAGGACTGCAGTGGCAG...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTCTCCTGGACCTTCTTaGTTTCTTGAAATAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEISPGPS*FLEITA Trigger: GGCTGTTATTTCAAGAAACCAAGAAGGTCCAGGAGA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTACCAGGGAATGTGTATaGAGTTGCCTTTCGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEITRECV*SCLSKN Trigger: GTTTTTCGAAAGGCAACTCCATACACATTCCCTGGT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCATTCTTGTTAATGACATaGCCAGTGCCACCAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSFLLMT*PVPPGN Trigger: ATTCCCTGGTGGCACTGGCCATGTCATTAACAAGAA...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTAGGCCATATAATGGATaGTTTGAACAGCATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIRPYNG*FEQHSS Trigger: GGAGGAATGCTGTTCAAACCATCCATTATATGGCCT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
||
| 3UTR CAA 72 bp | ACATTATCACTTGATTTTGGGGACAAAGTCTCTCATTaGATTGGGAGCTTGTCCATGAGGACAACCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSLDFGDKVSH*IGSLSMRTTWL Trigger: CAGCCAGGTTGTCCTCATGGACAAGCTCCCAATCAAATGAGAGACTTTGTCCCCAAAATCAAGTGATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGACCATAAGTCATGTCTaGCCCAGCCATGTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWTISHV*PSHVLK Trigger: TTTGAGTACATGGCTGGGTCAGACATGACTTATGGT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCACCAGATATCCATTCCTaGATCGTAAGTTCCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSPDIHS*IVSSYL Trigger: GAGATAGGAACTTACGATGCAGGAATGGATATCTGG...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGAATGTGTATGGAGTTaGCTTTCGAAAAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALECVWS*LSKNMT Trigger: GGTCATGTTTTTCGAAAGGCAACTCCATACACATTC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAACCAGGGAATGTGTATaGAGTTGCCTTTCGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSTRECV*SCLSKN Trigger: GTTTTTCGAAAGGCAACTCCATACACATTCCCTGGT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGTTCTTGTTAATGACATaGCCAGTGCCACCAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWFLLMT*PVPPGN Trigger: ATTCCCTGGTGGCACTGGCCATGTCATTAACAAGAA...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGGTTCATCAAGACATTaGTTACTGTTAGCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFIGTDGLILRASCRSALGSSRH*LLLACL Trigger: GAGACATGCTAACAGTAACCAATGTCTTGATGAACC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACTCAGCAGCCATTGTTaGGATCTGCTGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRLSSHC*DLLPLQ Trigger: CTGCAGTGGCAGCAGATCCCAACAATGGCTGCTGAG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTCTCTAATGTCAACTTaGGAAAATCTCTTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEISLMST*ENLFHW Trigger: CCAGTGAAAGAGATTTTCTCAAGTTGACATTAGAGA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGATATGACCTGTCCTTTTaGAGCTGCTGCTCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRYDLSF*SCCSSE Trigger: CTCCGAGGAGCAGCAGCTTCAAAAGGACAGGTCATA...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATTCATATTCCCACAGCTaGTTTCCTCTCATGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNSYSHS*FPLMWW Trigger: CCACCACATGAGAGGAAATCAGCTGTGGGAATATGA...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATTGGCCAGAACCACCTTaGAGTAGACAAATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNWPEPP*SRQISS Trigger: TGAGGAGATTTGTCTACTGCAAGGTGGTTCTGGCCA...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTAAAGAACCTCCACATTaGCAGATCCTAAAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIKEPPH*QILKDI Trigger: AATGTCTTTTAGGATCTGGCAATGTGGAGGTTCTTT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGAATGTGTATGGAGTTaGCTTTCGAAAAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSECVWS*LSKNMT Trigger: GGTCATGTTTTTCGAAAGGCAACTCCATACACATTC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACTGCCACTGCAGTCCTaGATGGTAGGCACCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRLPLQS*MVGTIL Trigger: CAAAATGGTGCCTACCATGCAGGACTGCAGTGGCAG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACCCACATCAGAGAAGTaGCCAGAACCACCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRPTSEK*PEPPCS Trigger: ACTGCAAGGTGGTTCTGGCCACTTCTCTGATGTGGG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTCTCCAAGCTTCATTATaGAACACAATGACTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEILQASL*NTMTTL Trigger: AAGTGTAGTCATTGTGTTCCATAATGAAGCTTGGAG...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTTTCCTCTCATGTGGTaGCATTTTAGCATGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: DWELVHEDNLAGEEIQEIFPLMW*HFSMIT Trigger: TGTAATCATGCTAAAATGCCACCACATGAGAGGAAA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGGTTCATCAAGACATTaGTTACTGTTAGCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSEVHKASNKELTQCSGSSRH*LLLACL Trigger: GAGACATGCTAACAGTAACCAATGTCTTGATGAACC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR CAA 72 bp | TCCTCAAACTACTTGCCACTGATGTACGGTATTCTATaGTTCTGCTGCAGGTTTTCTTCTATTACCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSNYLPLMYGIL*FCCRFSSITCG Trigger: ACCACAGGTAATAGAAGAAAACCTGCAGCAGAACAATAGAATACCGTACATCAGTGGCAAGTAGTTTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGTCGTATCTCACCAAGTaGGTAATAACGTCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKSYLTK*VITSWD Trigger: ATCCCAAGACGTTATTACTCACTTGGTGAGATACGA...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGCTCTTGGTCATCTTTTaGAATAAGCACAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKLLVIF*NKHSLS Trigger: GGAAAGGCTGTGCTTATTCCAAAAGATGACCAAGAG...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGACCAGGGAATGTGTATaGAGTTGCCTTTCGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKTRECV*SCLSKN Trigger: GTTTTTCGAAAGGCAACTCCATACACATTCCCTGGT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGCATTATGGAACACAATaGCTACACTTGTGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWHYGTQ*LHLCLE Trigger: TTCCAAACACAAGTGTAGTCATTGTGTTCCATAATG...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGTCTCTAATGTCAACTTaGGAAAATCTCTTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWSLMST*ENLFHW Trigger: CCAGTGAAAGAGATTTTCTCAAGTTGACATTAGAGA...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGATCATATTCCCACAGCTaGTTTCCTCTCATGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRSYSHS*FPLMWW Trigger: CCACCACATGAGAGGAAATCAGCTGTGGGAATATGA...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATCTCTTGGTCATCTTTTaGAATAAGCACAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNLLVIF*NKHSLS Trigger: GGAAAGGCTGTGCTTATTCCAAAAGATGACCAAGAG...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGCTCCAAGCTTCATTATaGAACACAATGACTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWLQASL*NTMTTL Trigger: AAGTGTAGTCATTGTGTTCCATAATGAAGCTTGGAG...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGTTTCCTCTCATGTGGTaGCATTTTAGCATGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWFPLMW*HFSMIT Trigger: TGTAATCATGCTAAAATGCCACCACATGAGAGGAAA...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAACCATAAGTCATGTCTaGCCCAGCCATGTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRTISHV*PSHVLK Trigger: TTTGAGTACATGGCTGGGTCAGACATGACTTATGGT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGAAAGAACCTCCACATTaGCAGATCCTAAAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVILKRDGPYTTQRKKEPPH*QILKDI Trigger: AATGTCTTTTAGGATCTGGCAATGTGGAGGTTCTTT...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATGAATGTGTATGGAGTTaGCTTTCGAAAAACATGACC | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNECVWS*LSKNMT Trigger: GGTCATGTTTTTCGAAAGGCAACTCCATACACATTC...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATCATTATGGAACACAATaGCTACACTTGTGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNHYGTQ*LHLCLE Trigger: TTCCAAACACAAGTGTAGTCATTGTGTTCCATAATG...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACCAGATATCCATTCCTaGATCGTAAGTTCCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRPDIHS*IVSSYL Trigger: GAGATAGGAACTTACGATGCAGGAATGGATATCTGG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATAAAGAACCTCCACATTaGCAGATCCTAAAAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNKEPPH*QILKDI Trigger: AATGTCTTTTAGGATCTGGCAATGTGGAGGTTCTTT...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGATCTCCTGGACCTTCTTaGTTTCTTGAAATAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRSPGPS*FLEITA Trigger: GGCTGTTATTTCAAGAAACCAAGAAGGTCCAGGAGA...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGACTCTTGGTCATCTTTTaGAATAAGCACAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRLLVIF*NKHSLS Trigger: GGAAAGGCTGTGCTTATTCCAAAAGATGACCAAGAG...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGATCTCTAATGTCAACTTaGGAAAATCTCTTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: INKCDYMAKCVLVYETGRSLMST*ENLFHW Trigger: CCAGTGAAAGAGATTTTCTCAAGTTGACATTAGAGA...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| 3UTR CAA 72 bp | AGACTGTATTGCATCACTACTTTCTCATGGGGATTTTaGAATGCAGAGTCAATGGAAATTTGCTTTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLYCITTFSWGF*NAESMEICFRM Trigger: CATTCTAAAGCAAATTTCCATTGACTCTGCATTCAAAAATCCCCATGAGAAAGTAGTGATGCAATACAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAGTTCCTCAGCAGCCATaGTTGGGATCTGCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VFIGTDGLILRASCRSALVPQQP*LGSAAT Trigger: AGTGGCAGCAGATCCCAACAATGGCTGCTGAGGAAC...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS GCA 90 bp | ATGTTCCTCAGCAGCCATTGTTGGGATCTGCTGCCACTGCAGTCCTaGATGGTAGGCACCATTTTGTCTTCTTCAGAAGGTTCATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MFLSSHCWDLLPLQS*MVGTILSSSEGSSR Trigger: TCTTGATGAACCTTCTGAAGAAGACAAAATGGTGCCTACCATGCAGGACTGCAGTGGCAGCAGATCCCAACAATGGCTGCTGAGGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGTTCCTCAGCAGCCATaGTTGGGATCTGCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AGFSEVHKASNKELTQCSVPQQP*LGSAAT Trigger: AGTGGCAGCAGATCCCAACAATGGCTGCTGAGGAAC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS TCA 90 bp | GCAGCAGGGATCTCTCCTTCTTGTCATCACACTTGTTACACTCGCTaGAGTACAGGAGTAAGAAGACATCAACAAGCACCCACATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGISPSCHHTCYTR*STGVRRHQQAPTSE Trigger: CTCTGATGTGGGTGCTTGTTGATGTCTTCTTACTCCTGTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAAGGAGAGATCCCTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 ENSMUST00000136642.2 |
||
| CDS CCA 90 bp | ACCTGTTCATTTATTGTTGGCGTATATACGAGGCCATATAATGGATaGTTTGAACAGCATTCCTCCGCTCCCACCCCCAAAGAAGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCSFIVGVYTRPYNG*FEQHSSAPTPKEGA Trigger: AGCGCCTTCTTTGGGGGTGGGAGCGGAGGAATGCTGTTCAAACCATCCATTATATGGCCTCGTATATACGCCAACAATAAATGAACAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
||
| CDS-3UTR CAA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTGTGAGTAATAACGTCTaGGGATCTGGGAGTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DWELVHEDNLAGEEIQEIVSNNV*GSGSPD Trigger: ATCCGGACTCCCAGATCCCAAGACGTTATTACTCAC...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS CCA 90 bp | GTTGTTCTTGTTAATGACATGGCCAGTGCCACCAGGGAATGTGTATaGAGTTGCCTTTCGAAAAACATGACCGACATGAGAGCAAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVLVNDMASATRECV*SCLSKNMTDMRASH Trigger: GTGACTTGCTCTCATGTCGGTCATGTTTTTCGAAAGGCAACTCCATACACATTCCCTGGTGGCACTGGCCATGTCATTAACAAGAACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATGTTCCTCAGCAGCCATaGTTGGGATCTGCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNVPQQP*LGSAAT Trigger: AGTGGCAGCAGATCCCAACAATGGCTGCTGAGGAAC...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTTTCTTGTCATCACACTaGTTACACTCGCTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DWELVHEDNLAGEEIQEIFLSSH*LHSLKY Trigger: GTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAA...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTATTCTTGTCATCACACTaGTTACACTCGCTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VFIGTDGLILRASCRSALFLSSH*LHSLKY Trigger: GTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAA...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GATTGGGAGCTTGTCCATGAGGACAACCTGGCTGGTGAGGAAATTCAAGAAATTAGTCTTCTGTTGTTCTaGTTAATGACATGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DWELVHEDNLAGEEIQEISLLLF*LMTWPV Trigger: CACTGGCCATGTCATTAACAAGAACAACAGAAGACT...AATTTCTTGAATTTCCTCACCAGCCAGGTTGTCCTCATGGACAAGCTCCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCATAGGGACAGATGGTCTAATACTCCGTGCAAGCTGTAGGTCAGCTTTAAGTCTTCTGTTGTTCTaGTTAATGACATGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFIGTDGLILRASCRSALSLLLF*LMTWPV Trigger: CACTGGCCATGTCATTAACAAGAACAACAGAAGACT...TAAAGCTGACCTACAGCTTGCACGGAGTATTAGACCATCTGTCCCTATGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGACTACAGTGATTTTAAAAAGAGATGGTCCCTACACCACTCAAAGAAAGGTGAGTAATAACGTCTaGGGATCTGGGAGTCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: SVTTVILKRDGPYTTQRKVSNNV*GSGSPD Trigger: ATCCGGACTCCCAGATCCCAAGACGTTATTACTCAC...CTTTCTTTGAGTGGTGTAGGGACCATCTCTTTTTAAAATCACTGTAGTCACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCATTCTTGTCATCACACTaGTTACACTCGCTGAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: AGFSEVHKASNKELTQCSFLSSH*LHSLKY Trigger: GTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAA...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAGGAATGTGTATGGAGTaGCCTTTCGAAAAACATGAC | + |
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Preference number: 5 (lower is better) Translates to: AGFSEVHKASNKELTQCSGMCME*PFEKHD Trigger: GTCATGTTTTTCGAAAGGCAACTCCATACACATTCC...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATGTGAGTAATAACGTCTaGGGATCTGGGAGTCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNVSNNV*GSGSPD Trigger: ATCCGGACTCCCAGATCCCAAGACGTTATTACTCAC...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGGGAATGTGTATGGAGTaGCCTTTCGAAAAACATGAC | + |
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Preference number: 5 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWGMCME*PFEKHD Trigger: GTCATGTTTTTCGAAAGGCAACTCCATACACATTCC...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTCTCTGAAGTCCACAAAGCTTCAAACAAAGAACTCACCCAGTGTTCAAGGTTCATCAAGACATaGGTTACTGTTAGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: AGFSEVHKASNKELTQCSRFIKT*VTVSMS Trigger: AGACATGCTAACAGTAACCAATGTCTTGATGAACCT...TGAACACTGGGTGAGTTCTTTGTTTGAAGCTTTGTGGACTTCAGAGAAACCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CCA 90 bp | ATGGTAGGCACCATTTTGTCTTCTTCAGAAGGTTCATCAAGACATTaGTTACTGTTAGCATGTCTCAAAGTGAGTCTCTCAGCGTCATAT | + |
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Preference number: 5 (lower is better) Translates to: MVGTILSSSEGSSRH*LLLACLKVSLSASY Trigger: ATATGACGCTGAGAGACTCACTTTGAGACATGCTAACAGTAACCAATGTCTTGATGAACCTTCTGAAGAAGACAAAATGGTGCCTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATAGGGATCTCTCCTTCTaGTCATCACACTTGTTACAC | + |
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Preference number: 5 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNRDLSF*SSHLLH Trigger: GTGTAACAAGTGTGATGACAAGAAGGAGAGATCCCT...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAAGGATTAGTGGATCAGTGGCCGTGTGCTTACTTAACAAAGATGTGGAGGTTCATCAAGACATaGGTTACTGTTAGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: PLKGLVDQWPCAYLTKMWRFIKT*VTVSMS Trigger: AGACATGCTAACAGTAACCAATGTCTTGATGAACCT...CCACATCTTTGTTAAGTAAGCACACGGCCACTGATCCACTAATCCTTTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAAGGGATCTCTCCTTCTaGTCATCACACTTGTTACAC | + |
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Preference number: 5 (lower is better) Translates to: INKCDYMAKCVLVYETGRRDLSF*SSHLLH Trigger: GTGTAACAAGTGTGATGACAAGAAGGAGAGATCCCT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGTGAACAAAGGGGTTTTATGTGGAAATGACACACGAAATTGTCCTAATAGGTTCATCAAGACATaGGTTACTGTTAGCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: CTVNKGVLCGNDTRNCPNRFIKT*VTVSMS Trigger: AGACATGCTAACAGTAACCAATGTCTTGATGAACCT...ATTAGGACAATTTCGTGTGTCATTTCCACATAAAACCCCTTTGTTCACAGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAGGAATGTGTATGGAGTaGCCTTTCGAAAAACATGAC | + |
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Preference number: 5 (lower is better) Translates to: INKCDYMAKCVLVYETGRGMCME*PFEKHD Trigger: GTCATGTTTTTCGAAAGGCAACTCCATACACATTCC...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS-3UTR CAA 90 bp | ATAAATAAATGTGATTATATGGCCAAGTGTGTGTTGGTGTATGAGACTGGAAGAAGTCTTCTGTTGTTCTaGTTAATGACATGGCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: INKCDYMAKCVLVYETGRSLLLF*LMTWPV Trigger: CACTGGCCATGTCATTAACAAGAACAACAGAAGACT...TCTTCCAGTCTCATACACCAACACACACTTGGCCATATAATCACATTTATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS TCA 72 bp | ACAGCATTCCTCCGCTCCCACCCCCAAAGAAGGCGCTaGCAAGCAAAGATCGTGTACCTGGTTACCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TAFLRSHPQRRR*QAKIVYLVTSH Trigger: ATGGGAGGTAACCAGGTACACGATCTTTGCTTGTCAGCGCCTTCTTTGGGGGTGGGAGCGGAGGAATGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
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| CDS TCA 72 bp | CTAAGGTGCACTCGCAGTGTGCATCCAGAAAAGTTATaGCCTGTCCTTTTGAAGCTGCTGCTCCTCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LRCTRSVHPEKL*PVLLKLLLLGD Trigger: GTCTCCGAGGAGCAGCAGCTTCAAAAGGACAGGTCATAACTTTTCTGGATGCACACTGCGAGTGCACCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS GCA 72 bp | AGCAGCCATTGTTGGGATCTGCTGCCACTGCAGTCCTaGATGGTAGGCACCATTTTGTCTTCTTCAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSHCWDLLPLQS*MVGTILSSSEG Trigger: ACCTTCTGAAGAAGACAAAATGGTGCCTACCATGCAGGACTGCAGTGGCAGCAGATCCCAACAATGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 72 bp | GCAGGCAGCAGGGATCTCTCCTTCTTGTCATCACACTaGTTACACTCGCTGAAGTACAGGAGTAAGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: AGSRDLSFLSSH*LHSLKYRSKKT Trigger: TGTCTTCTTACTCCTGTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAAGGAGAGATCCCTGCTGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 ENSMUST00000136642.2 |
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| CDS CAA 72 bp | TTGTTGGCGTATATACGAGGCCATATAATGGATGGTTaGAACAGCATTCCTCCGCTCCCACCCCCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLAYIRGHIMDG*NSIPPLPPPKK Trigger: CTTCTTTGGGGGTGGGAGCGGAGGAATGCTGTTCAAACCATCCATTATATGGCCTCGTATATACGCCAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
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| CDS CCA 72 bp | GTTAATGACATGGCCAGTGCCACCAGGGAATGTGTATaGAGTTGCCTTTCGAAAAACATGACCGACATGAGA | + |
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Preference number: 6 (lower is better) Translates to: VNDMASATRECV*SCLSKNMTDMR Trigger: TCTCATGTCGGTCATGTTTTTCGAAAGGCAACTCCATACACATTCCCTGGTGGCACTGGCCATGTCATTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CCA 72 bp | TTTATTGTTGGCGTATATACGAGGCCATATAATGGATaGTTTGAACAGCATTCCTCCGCTCCCACCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FIVGVYTRPYNG*FEQHSSAPTPK Trigger: TTTGGGGGTGGGAGCGGAGGAATGCTGTTCAAACCATCCATTATATGGCCTCGTATATACGCCAACAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
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| CDS TCA 72 bp | ATCTCTCCTTCTTGTCATCACACTTGTTACACTCGCTaGAGTACAGGAGTAAGAAGACATCAACAAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: ISPSCHHTCYTR*STGVRRHQQAP Trigger: GGGTGCTTGTTGATGTCTTCTTACTCCTGTACTTCAGCGAGTGTAACAAGTGTGATGACAAGAAGGAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 ENSMUST00000136642.2 |
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| CDS TCA 72 bp | GCATTGATTGGTCTCAACATTTCGTATCTCACCAAGTaGGTAATAACGTCTTGGGATCTGGGAGTCCGGATA | + |
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Preference number: 6 (lower is better) Translates to: ALIGLNISYLTK*VITSWDLGVRI Trigger: TATCCGGACTCCCAGATCCCAAGACGTTATTACTCACTTGGTGAGATACGAAATGTTGAGACCAATCAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CCA 72 bp | ATCATCAACCAAGATGACCTCAGAGAGCAGGTAGTGTaGGGAGCGATTTATGACACTATAGACAGTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: IINQDDLREQVV*GAIYDTIDSSK Trigger: CTTAGAACTGTCTATAGTGTCATAAATCGCTCCCCACACTACCTGCTCTCTGAGGTCATCTTGGTTGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 72 bp | CAACATTTCGTATCTCACCAAGTGAGTAATAACGTCTaGGGATCTGGGAGTCCGGATAGATGTTTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QHFVSHQVSNNV*GSGSPDRCFPG Trigger: ACCTGGAAAACATCTATCCGGACTCCCAGATCCCAAGACGTTATTACTCACTTGGTGAGATACGAAATGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 90 bp | GATTGGTCTCAACATTTCGTATCTCACCAAGTGAGTAATAACGTCTaGGGATCTGGGAGTCCGGATAGATGTTTTCCAGGTACCAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DWSQHFVSHQVSNNV*GSGSPDRCFPGTKK Trigger: TTTCTTGGTACCTGGAAAACATCTATCCGGACTCCCAGATCCCAAGACGTTATTACTCACTTGGTGAGATACGAAATGTTGAGACCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 90 bp | CATGGTAGGCACCATTTTGTCTTCTTCAGAAGGTTCATCAAGACATaGGTTACTGTTAGCATGTCTCAAAGTGAGTCTCTCAGCGTCATA | + |
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Preference number: 6 (lower is better) Translates to: HGRHHFVFFRRFIKT*VTVSMSQSESLSVI Trigger: TATGACGCTGAGAGACTCACTTTGAGACATGCTAACAGTAACCAATGTCTTGATGAACCTTCTGAAGAAGACAAAATGGTGCCTACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 72 bp | CACCATTTTGTCTTCTTCAGAAGGTTCATCAAGACATaGGTTACTGTTAGCATGTCTCAAAGTGAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HHFVFFRRFIKT*VTVSMSQSESL Trigger: GAGAGACTCACTTTGAGACATGCTAACAGTAACCAATGTCTTGATGAACCTTCTGAAGAAGACAAAATGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CCA 72 bp | ACCATTTTGTCTTCTTCAGAAGGTTCATCAAGACATTaGTTACTGTTAGCATGTCTCAAAGTGAGTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TILSSSEGSSRH*LLLACLKVSLS Trigger: TGAGAGACTCACTTTGAGACATGCTAACAGTAACCAATGTCTTGATGAACCTTCTGAAGAAGACAAAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068595.6 ENSMUST00000112634.8 ENSMUST00000112635.8 ENSMUST00000112636.8 |
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| CDS CAA 72 bp | TGTCAGCAGTATAAGAAAACACCTGTTCATTTATTGTaGGCGTATATACGAGGCCATATAATGGATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: CQQYKKTPVHLL*AYIRGHIMDGL Trigger: CAAACCATCCATTATATGGCCTCGTATATACGCCAACAATAAATGAACAGGTGTTTTCTTATACTGCTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112634.8 |
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