Pregenerated sensors for GALNT12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039774Ensembl transcript IDs: ENSMUST00000045041.12, ENSMUST00000107744.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCTGAAGAAATCAACAGTATTTCTAGTGTCCACCTCATCCCCCTaGGAGAACTCTAACTCAACATTTGAGGTATTAACAGTTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: HLKKSTVFLVSTSSP*ENSNSTFEVLTVCV Trigger: TACACAAACTGTTAATACCTCAAATGTTGAGTTAGAGTTCTCTCAGGGGGATGAGGTGGACACTAGAAATACTGTTGATTTCTTCAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGAAATCAACAGTATTTCTAGTGTCCACCTCATCCCCCTGAGAGAACTCCGCTGTCCATCTCATTaGGCACACAGTCCACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: PEEINSISSVHLIPLRELRCPSH*AHSPQP Trigger: CGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCG...GAGTTCTCTCAGGGGGATGAGGTGGACACTAGAAATACTGTTGATTTCTTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGAAATCAACAGTATTTCTAGTGTCCACCTCATCCCCCTGAGAGAACTCCCTCAGAAAGCAGGATaGCAGGAGACATTTTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PEEINSISSVHLIPLRELPQKAG*QETFLK Trigger: CTTTAAAAATGTCTCCTGGCATCCTGCTTTCTGAGG...GAGTTCTCTCAGGGGGATGAGGTGGACACTAGAAATACTGTTGATTTCTTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGATTGCCCTCAGAAAGCAGGATGCCAGGAGACATTTTTAAAGTTTTCAAATTATTCACACTCTTGTaGCACCCAGCACATTCACGA | + |
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Preference number: 2 (lower is better) Translates to: LGLPSESRMPGDIFKVFKLFTLL*HPAHSR Trigger: TCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAA...TTTGAAAACTTTAAAAATGTCTCCTGGCATCCTGCTTTCTGAGGGCAATCCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR CCA 72 bp | TTCACGAATGACAACCGTGTACGCTGTCCATCTCATTaGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FTNDNRVRCPSH*AHSPQPWRAPS Trigger: GGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR TCA 72 bp | TATTCACACTCTTGTGACACCCAGCACATTCACGAATaGCAACCGTGTACGCTGTCCATCTCATTGGGCACA | + |
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Preference number: 3 (lower is better) Translates to: YSHSCDTQHIHE*QPCTLSISLGT Trigger: TGTGCCCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR TCA 72 bp | TTTTCAAAATCTGTACAAAGCTTATTCACACTCTTGTaGCACCCAGCACATTCACGAATGACAACCGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: FSKSVQSLFTLL*HPAHSRMTTVY Trigger: GTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| 3UTR TCA 72 bp | AAATCAACAGTATTTCTAGTGTCCACCTCATCCCCCTaGGAGAACTCTAACTCAACATTTGAGGTATTAACA | + |
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Preference number: 3 (lower is better) Translates to: KSTVFLVSTSSP*ENSNSTFEVLT Trigger: TGTTAATACCTCAAATGTTGAGTTAGAGTTCTCTCAGGGGGATGAGGTGGACACTAGAAATACTGTTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGCGCAGCTCCTCGCCCTaGAGCTGCAGCCGCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWRSSSP*SCSRTA Trigger: GGCGGTGCGGCTGCAGCTGCAGGGCGAGGAGCTGCG...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR GCA 90 bp | CCGTGTACGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCGGTGCGTTTCCAGAGTaGCACCACACTGCCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: PCTLSISLGTQSTAVEGSGAFPE*HHTARS Trigger: GGATCTGGCAGTGTGGTGGCACTCTGGAAACGCACC...GGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCGTACACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGGGTGCGTTTCCAGAGTaGCACCACACTGCCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: RCPSHWAHSPQPWRAPSLGAFPE*HHTARS Trigger: GGATCTGGCAGTGTGGTGGCACTCTGGAAACGCACC...CAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGCCAGGGCCAGCAGTaGCAGCAACGCCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVTPSTFTNDNRVRCPSHCQGQQ*QQRLPA Trigger: GGCCGGGAGGCGTTGCTGGCACTGCTGGCCCTGGCA...ATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | CATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGGCAAGGCGATGCAGTCATCTACCAGAATaGCCTCCTCCAGCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: HWAHSPQPWRAPSLARRCSHLPE*PPPAGC Trigger: ACATCCTGCTGGAGGAGGTCATTCTGGTAGATGACT...GCATCGCCTTGCCAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGGCAAGGCGATGCTGTAGGATGAACTCCTaGTTCTCTGGGACGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HWAHSPQPWRAPSLARRCCRMNS*FSGTVS Trigger: AGAGACCGTCCCAGAGAACCAGGAGTTCATCCTACA...GCATCGCCTTGCCAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR TCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCACACCTTGGGGAGCTGTaGCAGCTCGTTGGCCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPHLGEL*QLVGQA Trigger: CGCTTGGCCAACGAGCTGTCACAGCTCCCCAAGGTG...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | CGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGACGACATGCGCTCCTTaGAGAACCACCTCTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: RCPSHWAHSPQPWRAPSLTTCAP*RTTSGY Trigger: ATAACCAGAGGTGGTTCTTCAAGGAGCGCATGTCGT...CAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CCGTGTACGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCAGGTACAGAAGGACCTaGTGGCCTTCAACATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PCTLSISLGTQSTAVEGSRYRRT*WPSTWF Trigger: AAACCATGTTGAAGGCCACCAGGTCCTTCTGTACCT...GGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCGTACACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGGCAAGGCGATGCTACAGAAGGACCTGGTaGCCTTCAACATGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HWAHSPQPWRAPSLARRCYRRTW*PSTWFS Trigger: TGAAAACCATGTTGAAGGCCACCAGGTCCTTCTGTA...GCATCGCCTTGCCAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | ACCGTGTACGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCAGGTACAGAAGGACCTaGTGGCCTTCAACATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TVYAVHLIGHTVHSRGGLRYRRT*WPSTWF Trigger: AAACCATGTTGAAGGCCACCAGGTCCTTCTGTACCT...GAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCGTACACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATTCTCGTGGATCCTCTaGAGCAGAGGCTCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPFSWIL*SRGSSH Trigger: GTGGCTGGAGCCTCTGCTGCAGAGGATCCACGAGAA...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCAGCCAGGCCTGTCCTCTaGCACGTGCAATTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPARPVL*HVQFWV Trigger: TACCCAGAATTGCACGTGCCAGAGGACAGGCCTGGC...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGGCAAGGCGATGCCAACATGGTTTTCATTaGGAGGATTGTAGTCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HWAHSPQPWRAPSLARRCQHGFH*EDCSQG Trigger: GCCTTGACTACAATCCTCCCAATGAAAACCATGTTG...GCATCGCCTTGCCAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CGCTGTCCATCTCATTGGGCACACAGTCCACAGCCGTGGAGGGCTCCTTCCTTGTTGAAGAACCACCTCTaGTTATCTGAGTTGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: RCPSHWAHSPQPWRAPSLLKNHL*LSELVQ Trigger: CTGTACCAACTCAGATAACCAGAGGTGGTTCTTCAA...CAAGGAAGGAGCCCTCCACGGCTGTGGACTGTGTGCCCAATGAGATGGACAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCACAGCGCGCCCAGCCCTaGCAGGGCCAGCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QRISKSILYCMNLDYLTPQRAQP*QGQQCQ Trigger: CTGGCACTGCTGGCCCTGGCAGGGCTGGGCGCGCTG...TGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | CAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCAGGCAGCACTGGCTCGTaGCGCCCGGGGAGAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QRISKSILYCMNLDYLTPGSTGS*RPGRGV Trigger: GACTCCTCTCCCCGGGCGTCACGAGCCAGTGCTGCC...TGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | CTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTCGAAAAACTGGTTCTaGCCCATCCCATGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LVTPSTFTNDNRVRCPSHSKNWF*PIPWQR Trigger: CCTCTGCCATGGGATGGGTCAGAACCAGTTTTTCGA...ATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGAGAGTGCCACCACACTaGCAGATCCTAAAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWRVPPH*QILKEN Trigger: GTTCTCCTTTAGGATCTGGCAGTGTGGTGGCACTCT...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCAAGAGTGCCACCACACTaGCAGATCCTAAAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPRVPPH*QILKEN Trigger: GTTCTCCTTTAGGATCTGGCAGTGTGGTGGCACTCT...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATATCCATCCACACTTCTaGAGCTCGGACACTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LVTPSTFTNDNRVRCPSHIHPHF*SSDTVG Trigger: GCCAACAGTGTCCGAGCTGCAGAAGTGTGGATGGAT...ATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | ATTTTGGCTGTGGCATCAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTCGGGCAGCGGCGGCCTaGGCAGCACTGGCTCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: ILAVASTHKQKHSLLYESRAAAA*AALARD Trigger: GTCACGAGCCAGTGCTGCCCAGGCCGCCGCTGCCCG...AGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTGATGCCACAGCCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGCTTAGGCCTCTGTTCTaGAGCATCCCAAAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWLRPLF*SIPKKP Trigger: TGGCTTCTTTGGGATGCTCCAGAACAGAGGCCTAAG...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCACTTAGGCCTCTGTTCTaGAGCATCCCAAAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPLRPLF*SIPKKP Trigger: TGGCTTCTTTGGGATGCTCCAGAACAGAGGCCTAAG...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | ATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCACTCACACGCACCGCCTCCCCATaGGCTCCCAGAGCATCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ISKSILYCMNLDYLTPLTRTASP*APRASA Trigger: CGCCGATGCTCTGGGAGCGCATGGGGAGGCGGTGCG...TGTGAGTGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCAGACTGCCGCTCCCGCTaGGGAACCACGTGCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: QRISKSILYCMNLDYLTPDCRSR*GTTCHV Trigger: CACGTGGCACGTGGTTCCCCAGCGGGAGCGGCAGTC...TGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGTAGGATGAACTCCTaGTTCTCTGGGACGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVTPSTFTNDNRVRCPSHCRMNS*FSGTVS Trigger: AGAGACCGTCCCAGAGAACCAGGAGTTCATCCTACA...ATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGCTGTCCGAAGGAGTGTaGACCAGGCTTCATTATAAA | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWLSEGV*TRLHYK Trigger: TTTATAATGAAGCCTGGTCCACACTCCTTCGGACAG...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATTGAAGTCTTTACACTaGAGCTTAGCCCGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPLKSLH*SLARSF Trigger: GAAGCTTCGGGCTAAGCTCCAGTGTAAAGACTTCAA...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGTTGAAGTCTTTACACTaGAGCTTAGCCCGAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWLKSLH*SLARSF Trigger: GAAGCTTCGGGCTAAGCTCCAGTGTAAAGACTTCAA...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGTGGTGGCCTTCAACATaGTTTTCATTGGGAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWWWPST*FSLGGL Trigger: CAATCCTCCCAATGAAAACCATGTTGAAGGCCACCA...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CACACTCTTGTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATACAGAAGGACCTGGTaGCCTTCAACATGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HTLVTPSTFTNDNRVRCPYRRTW*PSTWFS Trigger: TGAAAACCATGTTGAAGGCCACCAGGTCCTTCTGTA...TGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCACAAGAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CAAAATCTGTACAAAGCTTATTCACACTCTTGTGACACCCAGCACATTCACGAAGCCAGGCCTGTCCTCTaGCACGTGCAATTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: QNLYKAYSHSCDTQHIHEARPVL*HVQFWV Trigger: TACCCAGAATTGCACGTGCCAGAGGACAGGCCTGGC...TTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGTCTGGTTATCTGAGTTaGTACAGTCCCGTAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWSGYLS*YSPVSM Trigger: CATACTTACGGGACTGTACCAACTCAGATAACCAGA...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR TCA 90 bp | GTGACACCCAGCACATTCACGAATGACAACCGTGTACGCTGTCCATCTCATTGGCATTATAAAATGCTATaGCAACAGAAGTCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VTPSTFTNDNRVRCPSHWHYKML*QQKSWA Trigger: TGCCCAAGACTTCTGTTGTCATAGCATTTTATAATG...CCAATGAGATGGACAGCGTACACGGTTGTCATTCGTGAATGTGCTGGGTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR GCA 90 bp | ATTTTGGCTGTGGCATCAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTTCAAAGCCGCCAATCTaGGGCTCTCCCGAGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ILAVASTHKQKHSLLYESSKPPI*GSPELP Trigger: GGGCAACTCGGGAGAGCCGCAGATTGGCGGCTTTGA...AGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTGATGCCACAGCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | CAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCATCGAAAAACTGGTTCTaGCCCATCCCATGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QRISKSILYCMNLDYLTPSKNWF*PIPWQR Trigger: CCTCTGCCATGGGATGGGTCAGAACCAGTTTTTCGA...TGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | TTAGGATTGCCCTCAGAAAGCAGGATGCCAGGAGACATTTTTAAAGTTTTCAAAACGACATGCGCTCCTTaGAGAACCACCTCTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LGLPSESRMPGDIFKVFKTTCAP*RTTSGY Trigger: ATAACCAGAGGTGGTTCTTCAAGGAGCGCATGTCGT...TTTGAAAACTTTAAAAATGTCTCCTGGCATCCTGCTTTCTGAGGGCAATCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR GCA 90 bp | CAACGCATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCAATGTTGATCTGGTGCTaGTTCACGCTCTCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QRISKSILYCMNLDYLTPMLIWC*FTLSSC Trigger: GCAGGAGGAGAGCGTGAAGCAGCACCAGATCAACAT...TGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTATGCGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR TCA 90 bp | ATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCACTCACACGCTCAGATAGATGTTaGTCTGGTGCTGCTTCACGC | + |
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Preference number: 4 (lower is better) Translates to: ISKSILYCMNLDYLTPLTRSDRC*SGAASR Trigger: GCGTGAAGCAGCACCAGATCAACATCTATCTGAGCG...TGTGAGTGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS-3UTR CCA 90 bp | CAAAATCTGTACAAAGCTTATTCACACTCTTGTGACACCCAGCACATTCACGAATGGTGGCCTTCAACATaGTTTTCATTGGGAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: QNLYKAYSHSCDTQHIHEWWPST*FSLGGL Trigger: CAATCCTCCCAATGAAAACCATGTTGAAGGCCACCA...TTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CAAAATCTGTACAAAGCTTATTCACACTCTTGTGACACCCAGCACATTCACGAACAACATGGTTTTCATTaGGAGGATTGTAGTCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: QNLYKAYSHSCDTQHIHEQHGFH*EDCSQG Trigger: GCCTTGACTACAATCCTCCCAATGAAAACCATGTTG...TTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CCA 90 bp | CAAAATCTGTACAAAGCTTATTCACACTCTTGTGACACCCAGCACATTCACGAATTGAAGAACCACCTCTaGTTATCTGAGTTGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: QNLYKAYSHSCDTQHIHELKNHL*LSELVQ Trigger: CTGTACCAACTCAGATAACCAGAGGTGGTTCTTCAA...TTCGTGAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS CCA 90 bp | GACCTGATAACATCGATCGGCGACCGCATCGACTGCCGCTCCCGCTaGGGAACCACGTGCCACGTGAATACCAGCCGCCAGTCAAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: DLITSIGDRIDCRSR*GTTCHVNTSRQSKP Trigger: CGGCTTTGACTGGCGGCTGGTATTCACGTGGCACGTGGTTCCCCAGCGGGAGCGGCAGTCGATGCGGTCGCCGATCGATGTTATCAGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS GCA 90 bp | GCCATAGTTGGAGACCTGATAACATCGATCGGCGACCGCATCGACTaGCGCTCCCGCTGGGGAACCACGTGCCACGTGAATACCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: AIVGDLITSIGDRID*RSRWGTTCHVNTSR Trigger: GCGGCTGGTATTCACGTGGCACGTGGTTCCCCAGCGGGAGCGGCAGTCGATGCGGTCGCCGATCGATGTTATCAGGTCTCCAACTATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS GCA 90 bp | ACCACGTGCCACGTGAATACCAGCCGCCAGTCAAAGCCGCCAATCTaGGGCTCTCCCGAGTTGCCCAGGTACTCAAAGGTGTTCCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: TTCHVNTSRQSKPPI*GSPELPRYSKVFQS Trigger: TGACTGGAACACCTTTGAGTACCTGGGCAACTCGGGAGAGCCGCAGATTGGCGGCTTTGACTGGCGGCTGGTATTCACGTGGCACGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CCA 90 bp | GGCAGAGGTACAGAAGGACCTGGTGGCCTTCAACATGGTTTTCATTaGGAGGATTGTAGTCAAGGCAGTACCCTCTTAGGCCTCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRGTEGPGGLQHGFH*EDCSQGSTLLGLCS Trigger: AGAACAGAGGCCTAAGAGGGTACTGCCTTGACTACAATCCTCCCAATGAAAACCATGTTGAAGGCCACCAGGTCCTTCTGTACCTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS GCA 90 bp | CTGTTCTGGAGCATCCCAAAGAAGCCAGGCCTGTCCTCTGGCACGTaGAATTCTGGGTACACTGTATCTAAGAACCACTTGAAGTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LFWSIPKKPGLSSGT*NSGYTVSKNHLKSL Trigger: TAAAGACTTCAAGTGGTTCTTAGATACAGTGTACCCAGAATTGCACGTGCCAGAGGACAGGCCTGGCTTCTTTGGGATGCTCCAGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS CCA 90 bp | AATTCTGGGTACACTGTATCTAAGAACCACTTGAAGTCTTTACACTaGAGCTTAGCCCGAAGCTTCTTCCTCTCTGTCACGTCCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: NSGYTVSKNHLKSLH*SLARSFFLSVTSPK Trigger: CTTTGGGGACGTGACAGAGAGGAAGAAGCTTCGGGCTAAGCTCCAGTGTAAAGACTTCAAGTGGTTCTTAGATACAGTGTACCCAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CAA 90 bp | TTAGGATTGCCCTCAGAAAGCAGGATGCCAGGAGACATTTTTAAAGTTTTCAAATACGACATGCGCTCCTaGAAGAACCACCTCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: LGLPSESRMPGDIFKVFKYDMRS*KNHLWL Trigger: TAACCAGAGGTGGTTCTTCAAGGAGCGCATGTCGTA...TTTGAAAACTTTAAAAATGTCTCCTGGCATCCTGCTTTCTGAGGGCAATCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS-3UTR CAA 90 bp | ATAAGCAAAAGCATTCTTTATTGTATGAATCTAGACTATCTCACCCCACTCACATACGACATGCGCTCCTaGAAGAACCACCTCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: ISKSILYCMNLDYLTPLTYDMRS*KNHLWL Trigger: TAACCAGAGGTGGTTCTTCAAGGAGCGCATGTCGTA...TGTGAGTGGGGTGAGATAGTCTAGATTCATACAATAAAGAATGCTTTTGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CCA 72 bp | CAGAGCATCGGCGGGCAGCGGCGGCCTGGGCAGCACTaGCTCGTGACGCCCGGGGAGAGGAGTCCGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QSIGGQRRPGQH*LVTPGERSPRG Trigger: CCCCCGCGGACTCCTCTCCCCGGGCGTCACGAGCCAGTGCTGCCCAGGCCGCCGCTGCCCGCCGATGCTCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CCA 72 bp | ACATCGATCGGCGACCGCATCGACTGCCGCTCCCGCTaGGGAACCACGTGCCACGTGAATACCAGCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSIGDRIDCRSR*GTTCHVNTSRQ Trigger: CTGGCGGCTGGTATTCACGTGGCACGTGGTTCCCCAGCGGGAGCGGCAGTCGATGCGGTCGCCGATCGATGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CAA 72 bp | AGGCCCTCTCTCCTGCTAGCACGGATCAGGCGCACCTaGGGGAGCTGTGACAGCTCGTTGGCCAAGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RPSLLLARIRRT*GSCDSSLAKRS Trigger: GGAACGCTTGGCCAACGAGCTGTCACAGCTCCCCAAGGTGCGCCTGATCCGTGCTAGCAGGAGAGAGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CAA 90 bp | GCTCGCACTAGGCCCTCTCTCCTGCTAGCACGGATCAGGCGCACCTaGGGGAGCTGTGACAGCTCGTTGGCCAAGCGTTCCTTTAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: ARTRPSLLLARIRRT*GSCDSSLAKRSFRC Trigger: GCACCTAAAGGAACGCTTGGCCAACGAGCTGTCACAGCTCCCCAAGGTGCGCCTGATCCGTGCTAGCAGGAGAGAGGGCCTAGTGCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS GCA 72 bp | GGAGACCTGATAACATCGATCGGCGACCGCATCGACTaGCGCTCCCGCTGGGGAACCACGTGCCACGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GDLITSIGDRID*RSRWGTTCHVN Trigger: ATTCACGTGGCACGTGGTTCCCCAGCGGGAGCGGCAGTCGATGCGGTCGCCGATCGATGTTATCAGGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CCA 72 bp | TCGATAACAGGGCACACGACTGCGGACTCCTTCTCGTaGATCCTCTGCAGCAGAGGCTCCAGCCACCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SITGHTTADSFS*ILCSRGSSHPS Trigger: TGAGGGGTGGCTGGAGCCTCTGCTGCAGAGGATCCACGAGAAGGAGTCCGCAGTCGTGTGCCCTGTTATCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CCA 72 bp | GGATCAGGCGCACCTTGGGGAGCTGTGACAGCTCGTTaGCCAAGCGTTCCTTTAGGTGCTCTCTGTCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSGAPWGAVTAR*PSVPLGALCRC Trigger: ACAGCGACAGAGAGCACCTAAAGGAACGCTTGGCCAACGAGCTGTCACAGCTCCCCAAGGTGCGCCTGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CAA 72 bp | CGCCAGTCAAAGCCGCCAATCTGCGGCTCTCCCGAGTaGCCCAGGTACTCAAAGGTGTTCCAGTCAATCACA | + |
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Preference number: 6 (lower is better) Translates to: RQSKPPICGSPE*PRYSKVFQSIT Trigger: TGTGATTGACTGGAACACCTTTGAGTACCTGGGCAACTCGGGAGAGCCGCAGATTGGCGGCTTTGACTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS GCA 72 bp | GCCAGTCAAAGCCGCCAATCTGCGGCTCTCCCGAGTTaGCCAGGTACTCAAAGGTGTTCCAGTCAATCACAT | + |
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Preference number: 6 (lower is better) Translates to: ASQSRQSAALPS*PGTQRCSSQSH Trigger: ATGTGATTGACTGGAACACCTTTGAGTACCTGGGCAACTCGGGAGAGCCGCAGATTGGCGGCTTTGACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS CAA 90 bp | AATACCAGCCGCCAGTCAAAGCCGCCAATCTGCGGCTCTCCCGAGTaGCCCAGGTACTCAAAGGTGTTCCAGTCAATCACATCGATAACA | + |
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Preference number: 6 (lower is better) Translates to: NTSRQSKPPICGSPE*PRYSKVFQSITSIT Trigger: TGTTATCGATGTGATTGACTGGAACACCTTTGAGTACCTGGGCAACTCGGGAGAGCCGCAGATTGGCGGCTTTGACTGGCGGCTGGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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| CDS GCA 72 bp | AGCATCCCAAAGAAGCCAGGCCTGTCCTCTGGCACGTaGAATTCTGGGTACACTGTATCTAAGAACCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SIPKKPGLSSGT*NSGYTVSKNHL Trigger: CAAGTGGTTCTTAGATACAGTGTACCCAGAATTGCACGTGCCAGAGGACAGGCCTGGCTTCTTTGGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS CAA 90 bp | TGGTTATCTGAGTTGGTACAGTCCCGTAAGTATGGTGCAAAGCCGTaGTCTAACACCTTCTCTGTGGCCTCCACACATTTCCTGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: WLSELVQSRKYGAKP*SNTFSVASTHFLLC Trigger: GCACAGCAGGAAATGTGTGGAGGCCACAGAGAAGGTGTTAGACAACGGCTTTGCACCATACTTACGGGACTGTACCAACTCAGATAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS TCA 72 bp | TTCTCTGTGGCCTCCACACATTTCCTGCTGTGCTTGTaGACTAAAGTGCCATCCTCCTGTAGGATGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: FSVASTHFLLCL*TKVPSSCRMNS Trigger: GGAGTTCATCCTACAGGAGGATGGCACTTTAGTTCACAAGCACAGCAGGAAATGTGTGGAGGCCACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS CAA 72 bp | GAGTTGGTACAGTCCCGTAAGTATGGTGCAAAGCCGTaGTCTAACACCTTCTCTGTGGCCTCCACACATTTC | + |
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Preference number: 6 (lower is better) Translates to: ELVQSRKYGAKP*SNTFSVASTHF Trigger: GAAATGTGTGGAGGCCACAGAGAAGGTGTTAGACAACGGCTTTGCACCATACTTACGGGACTGTACCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS CCA 72 bp | TACACTGTATCTAAGAACCACTTGAAGTCTTTACACTaGAGCTTAGCCCGAAGCTTCTTCCTCTCTGTCACG | + |
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Preference number: 6 (lower is better) Translates to: YTVSKNHLKSLH*SLARSFFLSVT Trigger: CGTGACAGAGAGGAAGAAGCTTCGGGCTAAGCTCCAGTGTAAAGACTTCAAGTGGTTCTTAGATACAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045041.12 ENSMUST00000107744.2 |
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| CDS TCA 72 bp | GAAGGAGTGTGGACCAGGCTTCATTATAAAATGCTATaGCAACAGAAGTCTTGGGCAGGTTATCATAATCGT | + |
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Preference number: 6 (lower is better) Translates to: EGVWTRLHYKML*QQKSWAGYHNR Trigger: ACGATTATGATAACCTGCCCAAGACTTCTGTTGTCATAGCATTTTATAATGAAGCCTGGTCCACACTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045041.12 |
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