Pregenerated sensors for GALNT10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020520Ensembl transcript IDs: ENSMUST00000066987.14, ENSMUST00000108846.2
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACACGGGTGTGGACCACCTGTCATCCCAGCACTCCACCAGTGAGATaGGAGGAGGGGAGAACTCCTGGGAGCCGGCAGCAGCTAGCCTGT | + |
Preference number: 1 (lower is better) Translates to: TRVWTTCHPSTPPVR*EEGRTPGSRQQLAC Trigger: ACAGGCTAGCTGCTGCCGGCTCCCAGGAGTTCTCCCCTCCTCCCATCTCACTGGTGGAGTGCTGGGATGACAGGTGGTCCACACCCGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 90 bp | TCACGAGGCTGTGGCTGTGACGGCATTGGGTTGGACCGAAGCTTCTaGTGCCCTACCGCCTCTGCTTGGGTCAGGGGTTGCCTGACACCT | + |
Preference number: 1 (lower is better) Translates to: SRGCGCDGIGLDRSF*CPTASAWVRGCLTP Trigger: AGGTGTCAGGCAACCCCTGACCCAAGCAGAGGCGGTAGGGCACCAGAAGCTTCGGTCCAACCCAATGCCGTCACAGCCACAGCCTCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | GGGAAGGATCACCCTGGTGCACCATCCCCAGACACTCCAGCTCCATaGTGCAGAGGGTCTGACTGCTCAAGCCTCTGCAGGGGCTCTGTT | + |
Preference number: 1 (lower is better) Translates to: GKDHPGAPSPDTPAP*CRGSDCSSLCRGSV Trigger: AACAGAGCCCCTGCAGAGGCTTGAGCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR GCA 90 bp | ACATCCTTTACATCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTTaGTGGCCAGTGCTAGCTATGGAGCACTCGGAAGTCCCAATGGCC | + |
Preference number: 1 (lower is better) Translates to: TSFTSGCRGRGPSPG*WPVLAMEHSEVPMA Trigger: GGCCATTGGGACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGATGTAAAGGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | AAGGATCACCCTGGTGCACCATCCCCAGACACTCCAGCTCCATGCTaGAGAGGGTCTGACTGCTCAAGCCTCTGCAGGGGCTCTGTTCCA | + |
Preference number: 1 (lower is better) Translates to: KDHPGAPSPDTPAPC*RGSDCSSLCRGSVP Trigger: TGGAACAGAGCCCCTGCAGAGGCTTGAGCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 90 bp | TCCTTTACATCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTTGCTaGCCAGTGCTAGCTATGGAGCACTCGGAAGTCCCAATGGCCTCT | + |
Preference number: 1 (lower is better) Translates to: SFTSGCRGRGPSPGC*PVLAMEHSEVPMAS Trigger: AGAGGCCATTGGGACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGATGTAAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | GGGAGGGCCGCACAAATAGGCAGTTGTCCCTGCTGTGGGGGCCTCTaGGTCTCAGGTTCTGCTCTGCACTTTCTGCTTGAAGTCAGACGT | + |
Preference number: 1 (lower is better) Translates to: GRAAQIGSCPCCGGL*VSGSALHFLLEVRR Trigger: ACGTCTGACTTCAAGCAGAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGCCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | AGGGAGCCGCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTaGCTGGGAGCTGTTCGGTCTGGAGGTCTACTTAGCCGGCTGAAC | + |
Preference number: 1 (lower is better) Translates to: REPPRKSTEKGLWKH*LGAVRSGGLLSRLN Trigger: GTTCAGCCGGCTAAGTAGACCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGCGGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | CTCCAAGGCAGGGAGCCGCCAAGGAAAAGCACGGAGAAAGGGCTTTaGAAGCATTGGCTGGGAGCTGTTCGGTCTGGAGGTCTACTTAGC | + |
Preference number: 1 (lower is better) Translates to: LQGREPPRKSTEKGL*KHWLGAVRSGGLLS Trigger: GCTAAGTAGACCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGCGGCTCCCTGCCTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | TGGGGACCCGATGACCCCGATCCCAGCATCTCTAAGGCAGAGCTCTaGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACCAG | + |
Preference number: 1 (lower is better) Translates to: WGPDDPDPSISKAEL*PQDHVSVTSLASDQ Trigger: CTGGTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTTAGAGATGCTGGGATCGGGGTCATCGGGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | CACCTTTCAGGGCTTCTGAGGACACTGCTGGCTGATGGCCTCCAGTaGTTCAGGACAGTTAATCTGCATGGAGGCACAGGAGTGAGCTGG | + |
Preference number: 1 (lower is better) Translates to: HLSGLLRTLLADGLQ*FRTVNLHGGTGVSW Trigger: CCAGCTCACTCCTGTGCCTCCATGCAGATTAACTGTCCTGAAGCACTGGAGGCCATCAGCCAGCAGTGTCCTCAGAAGCCCTGAAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 90 bp | ACACTTGGAGAATTGCTGGTTCCTGTTCTGAGGGAAGGATCACCCTaGTGCACCATCCCCAGACACTCCAGCTCCATGCTGCAGAGGGTC | + |
Preference number: 1 (lower is better) Translates to: TLGELLVPVLREGSP*CTIPRHSSSMLQRV Trigger: GACCCTCTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR TCA 90 bp | CTGCTGCGTGGGCTGTGGCACAGGCCCATCAGCAGAGTAGAAACCTaGCTCTTCAGGACAAGGATTTCCACACCTGAAGCCCAAACAAGG | + |
Preference number: 1 (lower is better) Translates to: LLRGLWHRPISRVET*LFRTRISTPEAQTR Trigger: CCTTGTTTGGGCTTCAGGTGTGGAAATCCTTGTCCTGAAGAGTCAGGTTTCTACTCTGCTGATGGGCCTGTGCCACAGCCCACGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | CCAGTGCTAGCTATGGAGCACTCGGAAGTCCCAATGGCCTCTCATTaGCCTGGACCAACACAGAAGCTGGGCAATTCTAGCAGTTCCCTC | + |
Preference number: 1 (lower is better) Translates to: PVLAMEHSEVPMASH*PGPTQKLGNSSSSL Trigger: GAGGGAACTGCTAGAATTGCCCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCATAGCTAGCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 90 bp | ATGGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCTaGGGGAAGGATCACCCTGGTGCACCATCCCCAGACACTCCAGCT | + |
Preference number: 1 (lower is better) Translates to: MAVFCRHLENCWFLF*GKDHPGAPSPDTPA Trigger: AGCTGGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR TCA 90 bp | CTTGAACAAAGCAGAAGGCAAAGACCTACACCAGAGGCTGTCCTCTaGCCTCCACATGTGTTGTGGCACACATGGCCCTCACCCACTCTC | + |
Preference number: 1 (lower is better) Translates to: LEQSRRQRPTPEAVL*PPHVLWHTWPSPTL Trigger: GAGAGTGGGTGAGGGCCATGTGTGCCACAACACATGTGGAGGTCAGAGGACAGCCTCTGGTGTAGGTCTTTGCCTTCTGCTTTGTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR GCA 90 bp | AGCTGGGCAATTCTAGCAGTTCCCTCAAGAACAGGCAGACTTCCTTaGCAGCAGCTGGCACACAGGTTTAAGCTGTCCCAAGGCCGATAC | + |
Preference number: 1 (lower is better) Translates to: SWAILAVPSRTGRLP*QQLAHRFKLSQGRY Trigger: GTATCGGCCTTGGGACAGCTTAAACCTGTGTGCCAGCTGCTGGCAAGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAATTGCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | GTTGTGGCACACATGGCCCTCACCCACTCTCGCAAGTGTGACAAATaGCCAGGTGAACCGATGGCAGTGTTCTGCAGACACTTGGAGAAT | + |
Preference number: 1 (lower is better) Translates to: VVAHMALTHSRKCDK*PGEPMAVFCRHLEN Trigger: ATTCTCCAAGTGTCTGCAGAACACTGCCATCGGTTCACCTGGGCATTTGTCACACTTGCGAGAGTGGGTGAGGGCCATGTGTGCCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 90 bp | CGGAAGTCCCAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCTaGGCAATTCTAGCAGTTCCCTCAAGAACAGGCAGACTTCCTTGC | + |
Preference number: 1 (lower is better) Translates to: RKSQWPLIALDQHRS*AILAVPSRTGRLPC Trigger: GCAAGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAATTGCCCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | CCCTCACCCACTCTCGCAAGTGTGACAAATGCCCAGGTGAACCGATaGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCT | + |
Preference number: 1 (lower is better) Translates to: PSPTLASVTNAQVNR*QCSADTWRIAGSCS Trigger: AGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATCGGTTCACCTGGGCATTTGTCACACTTGCGAGAGTGGGTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR TCA 90 bp | GCTTTCAACAGAACCACAGAACTTTCCAGAAACTCCAGGGTTCTGTaGGGTTGGAACCACAGCAGTCATTATCTGGGGGAAGCCACCCCC | + |
Preference number: 1 (lower is better) Translates to: AFNRTTELSRNSRVL*GWNHSSHYLGEATP Trigger: GGGGGTGGCTTCCCCCAGATAATGACTGCTGTGGTTCCAACCTCACAGAACCCTGGAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 90 bp | GTCAGAGTTCAGCAGTCACAAATGCTGAGGTGCGCTCAGAGGAAGTaGCTGCTGGAGAAGGGGACGGAACCAGATGAGGATGGAATGAAT | + |
Preference number: 1 (lower is better) Translates to: VRVQQSQMLRCAQRK*LLEKGTEPDEDGMN Trigger: ATTCATTCCATCCTCATCTGGTTCCGTCCCCTTCTCCAGCAGTCACTTCCTCTGAGCGCACCTCAGCATTTGTGACTGCTGAACTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | AGGATTTCCACACCTGAAGCCCAAACAAGGTGGGGATTAAGTATCTaGAGCCAGCCACCAAGCCAACCTGGTTCTTCCTGTGACACACCT | + |
Preference number: 1 (lower is better) Translates to: RISTPEAQTRWGLSI*SQPPSQPGSSCDTP Trigger: AGGTGTGTCACAGGAAGAACCAGGTTGGCTTGGTGGCTGGCTGCAGATACTTAATCCCCACCTTGTTTGGGCTTCAGGTGTGGAAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 90 bp | TCAGACAGAGTGCTCATATGGAAAAGGGCACTAGAAATCCACAAGTaGGCTGTGACAGCACAGGGGCTACGTGGAGGTGGTTCTACAGCA | + |
Preference number: 1 (lower is better) Translates to: SDRVLIWKRALEIHK*AVTAQGLRGGGSTA Trigger: TGCTGTAGAACCACCTCCACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGGATTTCTAGTGCCCTTTTCCATATGAGCACTCTGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 90 bp | CAGCAGAGTAGAAACCTGACTCTTCAGGACAAGGATTTCCACACCTaGAGCCCAAACAAGGTGGGGATTAAGTATCTGCAGCCAGCCACC | + |
Preference number: 1 (lower is better) Translates to: QQSRNLTLQDKDFHT*SPNKVGIKYLQPAT Trigger: GGTGGCTGGCTGCAGATACTTAATCCCCACCTTGTTTGGGCTTCAGGTGTGGAAATCCTTGTCCTGAAGAGTCAGGTTTCTACTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | GCACTCTTTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTaGCCTGAGCACTGGATGCAGACAGTCTCCTCTGTGAGAAGTAGG | + |
Preference number: 1 (lower is better) Translates to: ALFVPFTLPDFRQTG*PEHWMQTVSSVRSR Trigger: CCTACTTCTCACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAAAGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | ATGAGTCGCTATGCTCCTTCCGAAGAGCTCAGGATGGTGGGCGGTTaGGACCACTGGAGTAAGATTTTTACAGTTACGACCATAGGTGCT | + |
Preference number: 1 (lower is better) Translates to: MSRYAPSEELRMVGG*DHWSKIFTVTTIGA Trigger: AGCACCTATGGTCGTAACTGTAAAAATCTTACTCCAGTGGTCCCAACCGCCCACCATCCTGAGCTCTTCGGAAGGAGCATAGCGACTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR GCA 90 bp | CCTGGCTGCTTGCGTTATATGCCCACACGTGCCATGGCTCATCTATaGTTTCAACAGAACCACAGAACTTTCCAGAAACTCCAGGGTTCT | + |
Preference number: 1 (lower is better) Translates to: PGCLRYMPTRAMAHL*FQQNHRTFQKLQGS Trigger: AGAACCCTGGAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGTGGGCATATAACGCAAGCAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 90 bp | CCCTGGCTCAGCATCAAAACCTTGAACCAAAATATGAGTAGGATTTaGCGGAGAAAGCCTCAGCGGCAAGTGCTGATGAATTCAGGGTGG | + |
Preference number: 1 (lower is better) Translates to: PWLSIKTLNQNMSRI*RRKPQRQVLMNSGW Trigger: CCACCCTGAATTCATCAGCACTTGCCGCTGAGGCTTTCTCCGGCAAATCCTACTCATATTTTGGTTCAAGGTTTTGATGCTGAGCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 90 bp | TTTTACAGTTACGACCATAGGTGCTCCTGGTGTCAGGCACAGGCTTaGTCTGGTAACACACATTGTCAGCTCACTGATCTGAAGCTGGAA | + |
Preference number: 1 (lower is better) Translates to: FYSYDHRCSWCQAQA*SGNTHCQLTDLKLE Trigger: TTCCAGCTTCAGATCAGTGAGCTGACAATGTGTGTTACCAGACCAAGCCTGTGCCTGACACCAGGAGCACCTATGGTCGTAACTGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 90 bp | AACACACATTGTCAGCTCACTGATCTGAAGCTGGAAATATCAGCGTaGCTGAACAACACTCTTGTATGTCAGCAGAAGATTCTACATCAT | + |
Preference number: 1 (lower is better) Translates to: NTHCQLTDLKLEISA*LNNTLVCQQKILHH Trigger: ATGATGTAGAATCTTCTGCTGACATACAAGAGTGTTGTTCAGCCACGCTGATATTTCCAGCTTCAGATCAGTGAGCTGACAATGTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CAA 90 bp | CGGCATTGGGTTGGACCGAAGCTTCTGGTGCCCTACCGCCTCTGCTaGGGTCAGGGGTTGCCTGACACCTGGCTGCTTGCGTTATATGCC | + |
Preference number: 2 (lower is better) Translates to: RHWVGPKLLVPYRLC*GQGLPDTWLLALYA Trigger: GGCATATAACGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCCAAGCAGAGGCGGTAGGGCACCAGAAGCTTCGGTCCAACCCAATGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR TCA 90 bp | CCACAAGTGAGCTGTGACAGCACAGGGGCTACGTGGAGGTGGTTCTACAGCACCGGGTCAGGGGTTGCCTaGCACCTGGCTGCTTGCGTT | + |
Preference number: 2 (lower is better) Translates to: PQVSCDSTGATWRWFYSTGSGVA*HLAACV Trigger: AACGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCC...GGTGCTGTAGAACCACCTCCACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | CCCTTGGCTGCAACACGCATCCCTGCTGGATTCTGGACACCCACCCACTCCCCTACAGGCAGACTTCCTTaGCAGCAGCTGGCACACAGG | + |
Preference number: 2 (lower is better) Translates to: PLAATRIPAGFWTPTHSPTGRLP*QQLAHR Trigger: CCTGTGTGCCAGCTGCTGGCAAGGAAGTCTGCCTGT...AGGGGAGTGGGTGGGTGTCCAGAATCCAGCAGGGATGCGTGTTGCAGCCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 90 bp | GACATCCTTTACATCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTaGCTGGCCAGTGCTAGCTATGGAGCACTCGGAAGTCCCAATGGC | + |
Preference number: 2 (lower is better) Translates to: DILYIWLQRKGPLAW*LASASYGALGSPNG Trigger: GCCATTGGGACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGATGTAAAGGATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | TTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTGGAGCCAGCCGCCCGGCCTaGTGCGTGGGCTGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: LFLSHCLTLDKQAALSTGASRPA*CVGCGT Trigger: TGTGCCACAGCCCACGCAGCAGGCCGGGCGGCTGGC...TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGGCAAGGGCAACCTCATaGCTCAAGGCTGCCCAGGCG | + |
Preference number: 2 (lower is better) Translates to: AKEKHGERALEALAGSCSARATS*LKAAQA Trigger: CGCCTGGGCAGCCTTGAGCCATGAGGTTGCCCTTGC...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | TTGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTCTGCTCTGCACTTTCTGCTGGCCTCTCATTGCCCTaGACCAACACAGAAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: LSLLWGPLGLRFCSALSAGLSLP*TNTEAG Trigger: CCCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGGCC...AGCAGAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | GCTATTCGGGAGGCTGAGGCAGGAGGACAGATAGTTGAAGGCCCACACCAGGAGCCTCCACATGTGTTGTaGCACACATGGCCCTCACCC | + |
Preference number: 2 (lower is better) Translates to: AIREAEAGGQIVEGPHQEPPHVL*HTWPSP Trigger: GGGTGAGGGCCATGTGTGCCACAACACATGTGGAGG...CTCCTGGTGTGGGCCTTCAACTATCTGTCCTCCTGCCTCAGCCTCCCGAATAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR TCA 90 bp | AGGTGCTCCTGGTGTCAGGCACAGGCTTGGTCTGGTAACACACATTGTCAGCTCGAGGACACTGCTGGCTaGTGGCCTCCAGTGCTTCAG | + |
Preference number: 2 (lower is better) Translates to: RCSWCQAQAWSGNTHCQLEDTAG*WPPVLQ Trigger: CTGAAGCACTGGAGGCCATCAGCCAGCAGTGTCCTC...GAGCTGACAATGTGTGTTACCAGACCAAGCCTGTGCCTGACACCAGGAGCACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CAA 90 bp | CCTACCGCCTCTGCTTGGGTCAGGGGTTGCCTGACACCTGGCTGCTaGCGTTATATGCCCACACGTGCCATGGCTCATCTATGCTTTCAA | + |
Preference number: 2 (lower is better) Translates to: PTASAWVRGCLTPGC*RYMPTRAMAHLCFQ Trigger: TTGAAAGCATAGATGAGCCATGGCACGTGTGGGCATATAACGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCCAAGCAGAGGCGGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | TGGAGCACTCGGAAGTCCCAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCCAGGCTCCGCCTTCTTaGAGAGCCATTGGTATGGTC | + |
Preference number: 2 (lower is better) Translates to: WSTRKSQWPLIALDQHRSQAPPS*RAIGMV Trigger: GACCATACCAATGGCTCTCCAAGAAGGCGGAGCCTG...GCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | GCTGACTTTGGAGATCCACTAGGCCGCCCATCAGAGCAGCTCACTGCCGCAACGATTCCAAAATGTTTCTaGAATCTCCGGGGCGGAGGG | + |
Preference number: 2 (lower is better) Translates to: ADFGDPLGRPSEQLTAATIPKCF*NLRGGG Trigger: CCCTCCGCCCCGGAGATTCCAGAAACATTTTGGAAT...CGTTGCGGCAGTGAGCTGCTCTGATGGGCGGCCTAGTGGATCTCCAAAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | AAGTCCAACAGGCAAGCACCCTGGGTTCCTCGTCTGTCTCCTCCGTGTAAGAGTGTGTTGTGGCACACATaGCCCTCACCCACTCTCGCA | + |
Preference number: 2 (lower is better) Translates to: KSNRQAPWVPRLSPPCKSVLWHT*PSPTLA Trigger: TGCGAGAGTGGGTGAGGGCCATGTGTGCCACAACAC...ACTCTTACACGGAGGAGACAGACGAGGAACCCAGGGTGCTTGCCTGTTGGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR TCA 90 bp | GGGGAAGTGACTGCTGAGCAAGCCAGACGACCTGGGTTTGAATTCCTAGAATCTCCAGCACTCCACCAGTaGGATGGGAGGAGGGGAGAA | + |
Preference number: 2 (lower is better) Translates to: GEVTAEQARRPGFEFLESPALHQ*DGRRGE Trigger: TTCTCCCCTCCTCCCATCTCACTGGTGGAGTGCTGG...AGATTCTAGGAATTCAAACCCAGGTCGTCTGGCTTGCTCAGCAGTCACTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCACAGGCTGGTGAGCTCTaGTATGATGTGAGCAGGCTC | + |
Preference number: 2 (lower is better) Translates to: GLKGSHDADFGDPLGRPSQAGEL*YDVSRL Trigger: GAGCCTGCTCACATCATAGCAGAGCTCACCAGCCTG...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | TCCACATGTGTTGTGGCACACATGGCCCTCACCCACTCTCGCAAGTGTGACAAAGACACTCCAGCTCCATaGTGCAGAGGGTCTGACTGC | + |
Preference number: 2 (lower is better) Translates to: STCVVAHMALTHSRKCDKDTPAP*CRGSDC Trigger: GCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTC...TTTGTCACACTTGCGAGAGTGGGTGAGGGCCATGTGTGCCACAACACATGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR CCA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGAAGAACCCAGCACCTTaGTGCCCACCGATGCCTCTT | + |
Preference number: 2 (lower is better) Translates to: AKEKHGERALEALAGSCSKNPAP*CPPMPL Trigger: AAGAGGCATCGGTGGGCACCAAGGTGCTGGGTTCTT...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 90 bp | TTTATTGAAACAAGGCCGCATTGCTCTCTGAGGACTCAACTCCCCTaGGCTGCAACACGCATCCCTGCTGGATTCTGGACACCCACCCAC | + |
Preference number: 2 (lower is better) Translates to: FIETRPHCSLRTQLP*AATRIPAGFWTPTH Trigger: GTGGGTGGGTGTCCAGAATCCAGCAGGGATGCGTGTTGCAGCCAAGGGGAGTTGAGTCCTCAGAGAGCAATGCGGCCTTGTTTCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR TCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCACTAGAAATCCACAAGTaGGCTGTGACAGCACAGGGG | + |
Preference number: 2 (lower is better) Translates to: GLKGSHDADFGDPLGRPSLEIHK*AVTAQG Trigger: CCCCTGTGCTGTCACAGCTCACTTGTGGATTTCTAG...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | CAGAGGCTGTCCTCTGACCTCCACATGTGTTGTGGCACACATGGCCCTCACCCAGTTTTAATGAACTCGTaGAACCCAGAGCAATGGGCA | + |
Preference number: 2 (lower is better) Translates to: QRLSSDLHMCCGTHGPHPVLMNS*NPEQWA Trigger: TGCCCATTGCTCTGGGTTGCACGAGTTCATTAAAAC...TGGGTGAGGGCCATGTGTGCCACAACACATGTGGAGGTCAGAGGACAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | GATGGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCTGAGGGAAGACTGCTCAAGCCTCTaGAGGGGCTCTGTTCCACCT | + |
Preference number: 2 (lower is better) Translates to: DGSVLQTLGELLVPVLREDCSSL*RGSVPP Trigger: AGGTGGAACAGAGCCCCTGCAGAGGCTTGAGCAGTC...TTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | TTGAAGGCCCACACCAGGAGAATATTGAGAGTCGATGATGAGTCGCTATGCTCCGAAGGATCACCCTGGTaGACCATCCCCAGACACTCC | + |
Preference number: 2 (lower is better) Translates to: LKAHTRRILRVDDESLCSEGSPW*TIPRHS Trigger: GGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTTC...GGAGCATAGCGACTCATCATCGACTCTCAATATTCTCCTGGTGTGGGCCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR CCA 90 bp | TCCACGCTCCCCTGTCTGTCTGTCTGTCTGTCTAGCAAGGCACTAGTAAGTGGTTTTGGAAGCATTGGCTaGGAGCTGTTCGGTCTGGAG | + |
Preference number: 2 (lower is better) Translates to: STLPCLSVCLSSKALVSGFGSIG*ELFGLE Trigger: CTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAA...ACCACTTACTAGTGCCTTGCTAGACAGACAGACAGACAGACAGGGGAGCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 90 bp | TCTCACCTAATGGTGGCAGCAGGGCCCTGGCTCAGCATCAAAACCTaGAACCAAAATATGAGTAGGATTTGCCGGAGAAAGCCTCAGCGG | + |
Preference number: 2 (lower is better) Translates to: SHLMVAAGPWLSIKT*NQNMSRICRRKPQR Trigger: CCGCTGAGGCTTTCTCCGGCAAATCCTACTCATATTTTGGTTCAAGGTTTTGATGCTGAGCCAGGGCCCTGCTGCCACCATTAGGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR TCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCAAGGCACGGTTTTTATTaGAACAAGGCCGCATTGCTC | + |
Preference number: 2 (lower is better) Translates to: GLKGSHDADFGDPLGRPSRHGFY*NKAALL Trigger: GAGCAATGCGGCCTTGTTTCAATAAAAACCGTGCCT...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | TTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTGGAGTAAGACAGCCTGCCTaGCACACAATGGCCTCATGG | + |
Preference number: 2 (lower is better) Translates to: LFLSHCLTLDKQAALSTGVRQPA*HTMASW Trigger: CCATGAGGCCATTGTGTGGCAGGCAGGCTGTCTTAC...TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | AAATACCCAGAGAGCCAGGGGAGACATCCTTTACATCTGGCTGCAGAGGAAGGGTTCCTTGCCAGCAGCTaGCACACAGGTTTAAGCTGT | + |
Preference number: 2 (lower is better) Translates to: KYPESQGRHPLHLAAEEGFLASS*HTGLSC Trigger: ACAGCTTAAACCTGTGTGCCAGCTGCTGGCAAGGAA...CCCTTCCTCTGCAGCCAGATGTAAAGGATGTCTCCCCTGGCTCTCTGGGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACTGCCCACACGTGCCATaGCTCATCTATGCTTTCAAC | + |
Preference number: 2 (lower is better) Translates to: KAELWPQDHVSVTSLASDCPHVP*LIYAFN Trigger: GTTGAAAGCATAGATGAGCCATGGCACGTGTGGGCA...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | TTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTGGAAGAGGAAGTGACTGCTaGAGAAGGGGACGGAACCAG | + |
Preference number: 2 (lower is better) Translates to: LFLSHCLTLDKQAALSTGRGSDC*RRGRNQ Trigger: CTGGTTCCGTCCCCTTCTCCAGCAGTCACTTCCTCT...TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR TCA 90 bp | GGACACTGCTGGCTGATGGCCTCCAGTGCTTCAGGACAGTTAATCTGCATGGAGAATCAGACCCTGTCTTaGACAAAGCAGAAGGCAAAG | + |
Preference number: 2 (lower is better) Translates to: GHCWLMASSASGQLICMENQTLS*TKQKAK Trigger: CTTTGCCTTCTGCTTTGTTCAAGACAGGGTCTGATT...CTCCATGCAGATTAACTGTCCTGAAGCACTGGAGGCCATCAGCCAGCAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | GCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAACTCCAGTCCTTTACATCTGGCTaGAGAGGAAGGGGCCCCTCG | + |
Preference number: 2 (lower is better) Translates to: AMAHLCFQQNHRTFQKLQSFTSG*RGRGPS Trigger: CGAGGGGCCCCTTCCTCTGCAGCCAGATGTAAAGGA...CTGGAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR GCA 90 bp | AAGTCCAACAGGCAAGCACCCTGGGTTCCTCGTCTGTCTCCTCCGTGTAAGAGTATTCTACCCTCTGTCTaGATCAGAGTCACCTTTCAG | + |
Preference number: 2 (lower is better) Translates to: KSNRQAPWVPRLSPPCKSILPSV*IRVTFQ Trigger: CTGAAAGGTGACTCTGATGCAGACAGAGGGTAGAAT...ACTCTTACACGGAGGAGACAGACGAGGAACCCAGGGTGCTTGCCTGTTGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | ACACGTGCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAAGGGCACTGTCCTGTCTaGAAGGGCAACCTCATGGCT | + |
Preference number: 2 (lower is better) Translates to: TRAMAHLCFQQNHRTFQKGHCPV*KGNLMA Trigger: AGCCATGAGGTTGCCCTTGCAGACAGGACAGTGCCC...TTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | GCCGCAACGCAAGATCTATCATTGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTTCTAAGGCAGAGCTCTaGCCTCAGGACCATGTCTCA | + |
Preference number: 2 (lower is better) Translates to: AATQDLSLLAAFKARSSSSKAEL*PQDHVS Trigger: TGAGACATGGTCCTGAGGCCAGAGCTCTGCCTTAGA...ACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | TCCACATGTGTTGTGGCACACATGGCCCTCACCCACTCTCGCAAGTGTGACAAATGTTCTGCAGACACTTaGAGAATTGCTGGTTCCTGT | + |
Preference number: 2 (lower is better) Translates to: STCVVAHMALTHSRKCDKCSADT*RIAGSC Trigger: ACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACA...TTTGTCACACTTGCGAGAGTGGGTGAGGGCCATGTGTGCCACAACACATGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR GCA 90 bp | GCCGCAACGCAAGATCTATCATTGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTCTGCTCTGCACTTTCTaGTTGAAGTCAGACGTAAAG | + |
Preference number: 2 (lower is better) Translates to: AATQDLSLLAAFKARSSSLLCTF*LKSDVK Trigger: CTTTACGTCTGACTTCAAGCAGAAAGTGCAGAGCAG...ACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CCA 90 bp | GATGGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCTGAGGGAATGCAACCCAGAGCAATaGGCAAAATCCTTAGTTAGA | + |
Preference number: 2 (lower is better) Translates to: DGSVLQTLGELLVPVLRECNPEQ*AKSLVR Trigger: TCTAACTAAGGATTTTGCCCATTGCTCTGGGTTGCA...TTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR TCA 72 bp | GGGTGTGGACCACCTGTCATCCCAGCACTCCACCAGTaGGATGGGAGGAGGGGAGAACTCCTGGGAGCCGGC | + |
Preference number: 3 (lower is better) Translates to: GCGPPVIPALHQ*DGRRGELLGAG Trigger: GCCGGCTCCCAGGAGTTCTCCCCTCCTCCCATCTCACTGGTGGAGTGCTGGGATGACAGGTGGTCCACACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR GCA 72 bp | AATAAAGCTTTGGAGGAAGAGGCCAGCCGCCCGGCCTaGTGCGTGGGCTGTGGCACAGGCCCATCAGCAGAG | + |
Preference number: 3 (lower is better) Translates to: NKALEEEASRPA*CVGCGTGPSAE Trigger: CTCTGCTGATGGGCCTGTGCCACAGCCCACGCAGCAGGCCGGGCGGCTGGCCTCTTCCTCCAAAGCTTTATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | CCTGGTGCACCATCCCCAGACACTCCAGCTCCATGCTaGAGAGGGTCTGACTGCTCAAGCCTCTGCAGGGGC | + |
Preference number: 3 (lower is better) Translates to: PGAPSPDTPAPC*RGSDCSSLCRG Trigger: GCCCCTGCAGAGGCTTGAGCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 72 bp | TCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTTGCTaGCCAGTGCTAGCTATGGAGCACTCGGAAGTCCCA | + |
Preference number: 3 (lower is better) Translates to: SGCRGRGPSPGC*PVLAMEHSEVP Trigger: TGGGACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 72 bp | TGGACCACCTGTCATCCCAGCACTCCACCAGTGAGATaGGAGGAGGGGAGAACTCCTGGGAGCCGGCAGCAG | + |
Preference number: 3 (lower is better) Translates to: WTTCHPSTPPVR*EEGRTPGSRQQ Trigger: CTGCTGCCGGCTCCCAGGAGTTCTCCCCTCCTCCCATCTCACTGGTGGAGTGCTGGGATGACAGGTGGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR CAA 90 bp | GCAGTTGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTCTGCTCTGCACTTTCGGGCCCCTCGCCTGGTaGCTGGCCAGTGCTAGCTAT | + |
Preference number: 3 (lower is better) Translates to: AVVPAVGASGSQVLLCTFGPLAW*LASASY Trigger: ATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCC...GAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | ACATCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTTaGTGGCCAGTGCTAGCTATGGAGCACTCGGAAGTC | + |
Preference number: 3 (lower is better) Translates to: TSGCRGRGPSPG*WPVLAMEHSEV Trigger: GACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | GTCTCAGGGAGGGCCGCACAAATAGGCAGTTGTCCCTaGTGTGGGGGCCTCTGGGTCTCAGGTTCTGCTCTG | + |
Preference number: 3 (lower is better) Translates to: VSGRAAQIGSCP*CGGLWVSGSAL Trigger: CAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGCCCTCCCTGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | CCAGACACTCCAGCTCCATGCTGCAGAGGGTCTGACTaGTCAAGCCTCTGCAGGGGCTCTGTTCCACCTGGC | + |
Preference number: 3 (lower is better) Translates to: PDTPAPCCRGSD*SSLCRGSVPPG Trigger: GCCAGGTGGAACAGAGCCCCTGCAGAGGCTTGAGCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR GCA 72 bp | CACCCTGGTGCACCATCCCCAGACACTCCAGCTCCATaGTGCAGAGGGTCTGACTGCTCAAGCCTCTGCAGG | + |
Preference number: 3 (lower is better) Translates to: HPGAPSPDTPAP*CRGSDCSSLCR Trigger: CCTGCAGAGGCTTGAGCAGTCAGACCCTCTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR TCA 72 bp | GCTGCCCTGAGCACTGGATGCAGACAGTCTCCTCTGTaGGAAGTAGGGACTGCTGAAGCGAGGGGTCCACGC | + |
Preference number: 3 (lower is better) Translates to: AALSTGCRQSPL*EVGTAEARGPR Trigger: GCGTGGACCCCTCGCTTCAGCAGTCCCTACTTCTCACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 72 bp | GTGAGCAGGCTCCGCCTTCTTGGAGAGCCATTGGTATaGTCTGTTCTCCCCGTGGCCCCACCATGTCAGTCC | + |
Preference number: 3 (lower is better) Translates to: VSRLRLLGEPLV*SVLPVAPPCQS Trigger: GGACTGACATGGTGGGGCCACGGGGAGAACAGACCATACCAATGGCTCTCCAAGAAGGCGGAGCCTGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 72 bp | AGGGAGGGCCGCACAAATAGGCAGTTGTCCCTGCTGTaGGGGCCTCTGGGTCTCAGGTTCTGCTCTGCACTT | + |
Preference number: 3 (lower is better) Translates to: REGRTNRQLSLL*GPLGLRFCSAL Trigger: AAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGCCCTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | TGCTGGAGAAGGGGACGGAACCAGATGAGGATGGAATaGATCGGGCGAGCAAGGGAGCGAGTGAGGCTAGGG | + |
Preference number: 3 (lower is better) Translates to: CWRRGRNQMRME*IGRARERVRLG Trigger: CCCTAGCCTCACTCGCTCCCTTGCTCGCCCGATTCATTCCATCCTCATCTGGTTCCGTCCCCTTCTCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | GCCGCATTGCTCTCTGAGGACTCAACTCCCCTTGGCTaGAACACGCATCCCTGCTGGATTCTGGACACCCAC | + |
Preference number: 3 (lower is better) Translates to: AALLSEDSTPLG*NTHPCWILDTH Trigger: GTGGGTGTCCAGAATCCAGCAGGGATGCGTGTTGCAGCCAAGGGGAGTTGAGTCCTCAGAGAGCAATGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 72 bp | CACTCCACCAGTGAGATGGGAGGAGGGGAGAACTCCTaGGAGCCGGCAGCAGCTAGCCTGTTGTATACATGG | + |
Preference number: 3 (lower is better) Translates to: HSTSEMGGGENS*EPAAASLLYTW Trigger: CCATGTATACAACAGGCTAGCTGCTGCCGGCTCCCAGGAGTTCTCCCCTCCTCCCATCTCACTGGTGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR-3UTR CAA 90 bp | GCTGACTTTGGAGATCCACTAGGCCGCCCATCAGAGCAGCTCACTGCCGCAACGTTCCCAGCCGGCCACTaGTCAGACAGAGTGCTCATA | + |
Preference number: 3 (lower is better) Translates to: ADFGDPLGRPSEQLTAATFPAGH*SDRVLI Trigger: TATGAGCACTCTGTCTGACAAGTGGCCGGCTGGGAA...CGTTGCGGCAGTGAGCTGCTCTGATGGGCGGCCTAGTGGATCTCCAAAGTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CAA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGCAAGAACCCAGCACCTaGGTGCCCACCGATGCCTCT | + |
Preference number: 3 (lower is better) Translates to: AKEKHGERALEALAGSCSQEPST*VPTDAS Trigger: AGAGGCATCGGTGGGCACCAAGGTGCTGGGTTCTTG...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | TTCCCTGCCTGCAGCCCCTGGACTCCCTGTCAGAGCTaGGTGGACCGCGTTAAGATCTTGAAACCTGGGATG | + |
Preference number: 3 (lower is better) Translates to: FPACSPWTPCQS*VDRVKILKPGM Trigger: CATCCCAGGTTTCAAGATCTTAACGCGGTCCACTCAGCTCTGACAGGGAGTCCAGGGGCTGCAGGCAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | TTGCTGGTTCCTGTTCTGAGGGAAGGATCACCCTGGTaGACCATCCCCAGACACTCCAGCTCCATGCTGCAG | + |
Preference number: 3 (lower is better) Translates to: LLVPVLREGSPW*TIPRHSSSMLQ Trigger: CTGCAGCATGGAGCTGGAGTGTCTGGGGATGGTGCACCAGGGTGATCCTTCCCTCAGAACAGGAACCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 72 bp | AGGGAGCCGCCAAGGAAAAGCACGGAGAAAGGGCTTTaGAAGCATTGGCTGGGAGCTGTTCGGTCTGGAGGT | + |
Preference number: 3 (lower is better) Translates to: REPPRKSTEKGL*KHWLGAVRSGG Trigger: ACCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGCGGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CAA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGAACAGGCAGACTTCCTaGCCAGCAGCTGGCACACAG | + |
Preference number: 3 (lower is better) Translates to: AKEKHGERALEALAGSCSNRQTS*PAAGTQ Trigger: CTGTGTGCCAGCTGCTGGCAAGGAAGTCTGCCTGTT...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | AGCTCTAGTTGGCAGGGCAGGGTAAGACAGCCTGCCTaGCACACAATGGCCTCATGGCAAGGACACTGCATT | + |
Preference number: 3 (lower is better) Translates to: SSSWQGRVRQPA*HTMASWQGHCI Trigger: AATGCAGTGTCCTTGCCATGAGGCCATTGTGTGGCAGGCAGGCTGTCTTACCCTGCCCTGCCAACTAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | CACATGGCCCTCACCCACTCTCGCAAGTGTGACAAATaGCCAGGTGAACCGATGGCAGTGTTCTGCAGACAC | + |
Preference number: 3 (lower is better) Translates to: HMALTHSRKCDK*PGEPMAVFCRH Trigger: GTGTCTGCAGAACACTGCCATCGGTTCACCTGGGCATTTGTCACACTTGCGAGAGTGGGTGAGGGCCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 72 bp | GGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTaGGAGCTGTTCGGTCTGGAGGTCTACTTAGCCGGC | + |
Preference number: 3 (lower is better) Translates to: GKARRKGFGSIG*ELFGLEVYLAG Trigger: GCCGGCTAAGTAGACCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CAA 90 bp | GCCGCACAAATAGGCAGTTGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTCTAGGGTGAGTTCATGTTaGAGACATGGGGCTAAAGGT | + |
Preference number: 3 (lower is better) Translates to: AAQIGSCPCCGGLWVSGSRVSSC*RHGAKG Trigger: ACCTTTAGCCCCATGTCTCAAACATGAACTCACCCT...AGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR-3UTR CAA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCACCTCTGAATAAAGCTTaGGAGGAAGAGGCCAGCCGC | + |
Preference number: 3 (lower is better) Translates to: GLKGSHDADFGDPLGRPSPLNKA*EEEASR Trigger: GCGGCTGGCCTCTTCCTCCAAAGCTTTATTCAGAGG...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | CCACCGATGCCTCTTCTCCCACAGGAGGAAGGTTTATaGGCTCCACAGGAACCTGAGGGGTTTGTCAAGGTC | + |
Preference number: 3 (lower is better) Translates to: PPMPLLPQEEGL*APQEPEGFVKV Trigger: GACCTTGACAAACCCCTCAGGTTCCTGTGGAGCTCATAAACCTTCCTCCTGTGGGAGAAGAGGCATCGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | AGCAGAAGGCAAAGACCTACACCAGAGGCTGTCCTCTaGCCTCCACATGTGTTGTGGCACACATGGCCCTCA | + |
Preference number: 3 (lower is better) Translates to: SRRQRPTPEAVL*PPHVLWHTWPS Trigger: TGAGGGCCATGTGTGCCACAACACATGTGGAGGTCAGAGGACAGCCTCTGGTGTAGGTCTTTGCCTTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
||
3UTR GCA 72 bp | GCTATGGAGCACTCGGAAGTCCCAATGGCCTCTCATTaGCCTGGACCAACACAGAAGCTGGGCAATTCTAGC | + |
Preference number: 3 (lower is better) Translates to: AMEHSEVPMASH*PGPTQKLGNSS Trigger: GCTAGAATTGCCCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | TTCCCTCAAGAACAGGCAGACTTCCTTGCCAGCAGCTaGCACACAGGTTTAAGCTGTCCCAAGGCCGATACC | + |
Preference number: 3 (lower is better) Translates to: FPQEQADFLASS*HTGLSCPKADT Trigger: GGTATCGGCCTTGGGACAGCTTAAACCTGTGTGCCAGCTGCTGGCAAGGAAGTCTGCCTGTTCTTGAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | GATGACCCCGATCCCAGCATCTCTAAGGCAGAGCTCTaGCCTCAGGACCATGTCTCAGTTACTTCACTGGCA | + |
Preference number: 3 (lower is better) Translates to: DDPDPSISKAEL*PQDHVSVTSLA Trigger: TGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTTAGAGATGCTGGGATCGGGGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR TCA 72 bp | GAACATGCTGACAGGCTGGTGAGCTCTGCTATGATGTaGGCAGGCTCCGCCTTCTTGGAGAGCCATTGGTAT | + |
Preference number: 3 (lower is better) Translates to: EHADRLVSSAMM*AGSAFLESHWY Trigger: ATACCAATGGCTCTCCAAGAAGGCGGAGCCTGCTCACATCATAGCAGAGCTCACCAGCCTGTCAGCATGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR TCA 72 bp | TGGTGCCCAGGTAGCCCTGAAACTAGAACGGGCATCTaGAATACCCAGAGAGCCAGGGGAGACATCCTTTAC | + |
Preference number: 3 (lower is better) Translates to: WCPGSPETRTGI*NTQRARGDILY Trigger: GTAAAGGATGTCTCCCCTGGCTCTCTGGGTATTTCAGATGCCCGTTCTAGTTTCAGGGCTACCTGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR TCA 72 bp | TTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCTaGGGGAAGGATCACCCTGGTGCACCATCCCCAGAC | + |
Preference number: 3 (lower is better) Translates to: FCRHLENCWFLF*GKDHPGAPSPD Trigger: GTCTGGGGATGGTGCACCAGGGTGATCCTTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
||
3UTR GCA 72 bp | GGGGCCTCTGGGTCTCAGGTTCTGCTCTGCACTTTCTaGTTGAAGTCAGACGTAAAGACACTCATTGGGCTC | + |
Preference number: 3 (lower is better) Translates to: GASGSQVLLCTF*LKSDVKTLIGL Trigger: GAGCCCAATGAGTGTCTTTACGTCTGACTTCAAGCAGAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | CCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTaGCTGGGAGCTGTTCGGTCTGGAGGTCTACTTAGC | + |
Preference number: 3 (lower is better) Translates to: PRKSTEKGLWKH*LGAVRSGGLLS Trigger: GCTAAGTAGACCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | AGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTaGCAAGTGACCAGCTCCTTGGAGGGTGAGTTCATG | + |
Preference number: 3 (lower is better) Translates to: SSGLRTMSQLLH*QVTSSLEGEFM Trigger: CATGAACTCACCCTCCAAGGAGCTGGTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | TCATTGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTTaGCAGGGCAGGGTAAGACAGCCTGCCTGCCACACA | + |
Preference number: 3 (lower is better) Translates to: SLLAAFKARSSS*QGRVRQPACHT Trigger: TGTGTGGCAGGCAGGCTGTCTTACCCTGCCCTGCCAACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | CTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTaGATGCAGACAGTCTCCTCTGTGAGAAGTAGGGAC | + |
Preference number: 3 (lower is better) Translates to: LPDFRQTGCPEH*MQTVSSVRSRD Trigger: GTCCCTACTTCTCACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | GCCCAGGTGAACCGATGGCAGTGTTCTGCAGACACTTaGAGAATTGCTGGTTCCTGTTCTGAGGGAAGGATC | + |
Preference number: 3 (lower is better) Translates to: AQVNRWQCSADT*RIAGSCSEGRI Trigger: GATCCTTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATCGGTTCACCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
||
3UTR TCA 72 bp | GTGCTCATATGGAAAAGGGCACTAGAAATCCACAAGTaGGCTGTGACAGCACAGGGGCTACGTGGAGGTGGT | + |
Preference number: 3 (lower is better) Translates to: VLIWKRALEIHK*AVTAQGLRGGG Trigger: ACCACCTCCACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGGATTTCTAGTGCCCTTTTCCATATGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR TCA 72 bp | GCACGGTTTTTATTGAAACAAGGCCGCATTGCTCTCTaGGGACTCAACTCCCCTTGGCTGCAACACGCATCC | + |
Preference number: 3 (lower is better) Translates to: ARFLLKQGRIAL*GLNSPWLQHAS Trigger: GGATGCGTGTTGCAGCCAAGGGGAGTTGAGTCCTCAGAGAGCAATGCGGCCTTGTTTCAATAAAAACCGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR GCA 72 bp | ACACCTGAAGCCCAAACAAGGTGGGGATTAAGTATCTaGAGCCAGCCACCAAGCCAACCTGGTTCTTCCTGT | + |
Preference number: 3 (lower is better) Translates to: TPEAQTRWGLSI*SQPPSQPGSSC Trigger: ACAGGAAGAACCAGGTTGGCTTGGTGGCTGGCTGCAGATACTTAATCCCCACCTTGTTTGGGCTTCAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR GCA 72 bp | GTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTaGCCTGAGCACTGGATGCAGACAGTCTCCTCTGTG | + |
Preference number: 3 (lower is better) Translates to: VPFTLPDFRQTG*PEHWMQTVSSV Trigger: CACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | CAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCTaGGCAATTCTAGCAGTTCCCTCAAGAACAGGCAGA | + |
Preference number: 3 (lower is better) Translates to: QWPLIALDQHRS*AILAVPSRTGR Trigger: TCTGCCTGTTCTTGAGGGAACTGCTAGAATTGCCCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | TACGACCATAGGTGCTCCTGGTGTCAGGCACAGGCTTaGTCTGGTAACACACATTGTCAGCTCACTGATCTG | + |
Preference number: 3 (lower is better) Translates to: YDHRCSWCQAQA*SGNTHCQLTDL Trigger: CAGATCAGTGAGCTGACAATGTGTGTTACCAGACCAAGCCTGTGCCTGACACCAGGAGCACCTATGGTCGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
||
3UTR-3UTR CAA 90 bp | GCCGCAACGCAAGATCTATCATTGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTAGGGCTTTGGAAGCATaGGCTGGGAGCTGTTCGGTC | + |
Preference number: 3 (lower is better) Translates to: AATQDLSLLAAFKARSSSRALEA*AGSCSV Trigger: GACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCT...ACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR-3UTR CAA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACCAGGGTTCTGTGAGGTaGGAACCACAGCAGTCATTA | + |
Preference number: 3 (lower is better) Translates to: KAELWPQDHVSVTSLASDQGSVR*EPQQSL Trigger: TAATGACTGCTGTGGTTCCAACCTCACAGAACCCTG...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR GCA 72 bp | ATTCTAGCAGTTCCCTCAAGAACAGGCAGACTTCCTTaGCAGCAGCTGGCACACAGGTTTAAGCTGTCCCAA | + |
Preference number: 3 (lower is better) Translates to: ILAVPSRTGRLP*QQLAHRFKLSQ Trigger: TTGGGACAGCTTAAACCTGTGTGCCAGCTGCTGGCAAGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR GCA 72 bp | CAGAGCAGCTCACTGCCGCAACGCAAGATCTATCATTaGTGGCTGCTTTTAAAGCCAGAAGCTCTAGTTGGC | + |
Preference number: 3 (lower is better) Translates to: QSSSLPQRKIYH*WLLLKPEALVG Trigger: GCCAACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGCAGTGAGCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | AGGACAAGGATTTCCACACCTGAAGCCCAAACAAGGTaGGGATTAAGTATCTGCAGCCAGCCACCAAGCCAA | + |
Preference number: 3 (lower is better) Translates to: RTRISTPEAQTR*GLSICSQPPSQ Trigger: TTGGCTTGGTGGCTGGCTGCAGATACTTAATCCCCACCTTGTTTGGGCTTCAGGTGTGGAAATCCTTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | AGCAGCTCACTGCCGCAACGCAAGATCTATCATTGCTaGCTGCTTTTAAAGCCAGAAGCTCTAGTTGGCAGG | + |
Preference number: 3 (lower is better) Translates to: SSSLPQRKIYHC*LLLKPEALVGR Trigger: CCTGCCAACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGCAGTGAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CCA 72 bp | ACTCTCGCAAGTGTGACAAATGCCCAGGTGAACCGATaGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGT | + |
Preference number: 3 (lower is better) Translates to: TLASVTNAQVNR*QCSADTWRIAG Trigger: ACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATCGGTTCACCTGGGCATTTGTCACACTTGCGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 72 bp | TATGCTCCTTCCGAAGAGCTCAGGATGGTGGGCGGTTaGGACCACTGGAGTAAGATTTTTACAGTTACGACC | + |
Preference number: 3 (lower is better) Translates to: YAPSEELRMVGG*DHWSKIFTVTT Trigger: GGTCGTAACTGTAAAAATCTTACTCCAGTGGTCCCAACCGCCCACCATCCTGAGCTCTTCGGAAGGAGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
||
3UTR CCA 72 bp | CACCTGGCTGCTTGCGTTATATGCCCACACGTGCCATaGCTCATCTATGCTTTCAACAGAACCACAGAACTT | + |
Preference number: 3 (lower is better) Translates to: HLAACVICPHVP*LIYAFNRTTEL Trigger: AAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGTGGGCATATAACGCAAGCAGCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | AGAACCACAGAACTTTCCAGAAACTCCAGGGTTCTGTaGGGTTGGAACCACAGCAGTCATTATCTGGGGGAA | + |
Preference number: 3 (lower is better) Translates to: RTTELSRNSRVL*GWNHSSHYLGE Trigger: TTCCCCCAGATAATGACTGCTGTGGTTCCAACCTCACAGAACCCTGGAGTTTCTGGAAAGTTCTGTGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR TCA 72 bp | TGGGAGCCGGCAGCAGCTAGCCTGTTGTATACATGGTaGATAACAATCAGACCCTGTCTTGAACAAAGCAGA | + |
Preference number: 3 (lower is better) Translates to: WEPAAASLLYTW*ITIRPCLEQSR Trigger: TCTGCTTTGTTCAAGACAGGGTCTGATTGTTATTCACCATGTATACAACAGGCTAGCTGCTGCCGGCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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3UTR CCA 72 bp | CACTTTCTGCTTGAAGTCAGACGTAAAGACACTCATTaGGCTCATAGGACCCGAATAAGTGTCCCTTCTCCA | + |
Preference number: 3 (lower is better) Translates to: HFLLEVRRKDTH*AHRTRISVPSP Trigger: TGGAGAAGGGACACTTATTCGGGTCCTATGAGCCCAATGAGTGTCTTTACGTCTGACTTCAAGCAGAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | TTGCGTTATATGCCCACACGTGCCATGGCTCATCTATaGTTTCAACAGAACCACAGAACTTTCCAGAAACTC | + |
Preference number: 3 (lower is better) Translates to: LRYMPTRAMAHL*FQQNHRTFQKL Trigger: GAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGTGGGCATATAACGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR GCA 72 bp | AGCATCAAAACCTTGAACCAAAATATGAGTAGGATTTaGCGGAGAAAGCCTCAGCGGCAAGTGCTGATGAAT | + |
Preference number: 3 (lower is better) Translates to: SIKTLNQNMSRI*RRKPQRQVLMN Trigger: ATTCATCAGCACTTGCCGCTGAGGCTTTCTCCGGCAAATCCTACTCATATTTTGGTTCAAGGTTTTGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CCA 72 bp | ATGCTTGTTTTAATGAACTCGTGCAACCCAGAGCAATaGGCAAAATCCTTAGTTAGACAGCAGAAGATGAGA | + |
Preference number: 3 (lower is better) Translates to: MLVLMNSCNPEQ*AKSLVRQQKMR Trigger: TCTCATCTTCTGCTGTCTAACTAAGGATTTTGCCCATTGCTCTGGGTTGCACGAGTTCATTAAAACAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR GCA 90 bp | ACTGCTCAAGCCTCTGCAGGGGCTCTGTTCCACCTGGCAGCCGGCTGGCAGCACGGGCTGCCGTCGGGCTaGCGCTCGCGGTACAGAGCC | + |
Preference number: 4 (lower is better) Translates to: TAQASAGALFHLAAGWQHGLPSG*RSRYRA Trigger: GGCTCTGTACCGCGAGCGGCAGCCCGACGGCAGCCC...GTGCTGCCAGCCGGCTGCCAGGTGGAACAGAGCCCCTGCAGAGGCTTGAGCAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CCA 90 bp | GCAGTTGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTCTGCTCTGCACTTTCCCCAAAGCCCCACGTTaGGCAGCAGGACCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: AVVPAVGASGSQVLLCTFPKAPR*AAGPGP Trigger: CGGCCCTGGTCCTGCTGCCCAACGTGGGGCTTTGGG...GAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | GTTGGACCGAAGCTTCTGGTGCCCTACCGCCTCTGCTaGGGTCAGGGGTTGCCTGACACCTGGCTGCTTGCG | + |
Preference number: 4 (lower is better) Translates to: VGPKLLVPYRLC*GQGLPDTWLLA Trigger: CGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCCAAGCAGAGGCGGTAGGGCACCAGAAGCTTCGGTCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCAGGGCTGCCGTCGGGCTaGCGCTCGCGGTACAGAGCC | + |
Preference number: 4 (lower is better) Translates to: GLKGSHDADFGDPLGRPSGLPSG*RSRYRA Trigger: GGCTCTGTACCGCGAGCGGCAGCCCGACGGCAGCCC...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GGAGGTGATCCCTCACAGCACCGGTTCCTCTCCAAGGCAGGGAGCCGCCAAGGAAGGGGATGTCCTCCATaGGGCCCCCACACATCCACA | + |
Preference number: 4 (lower is better) Translates to: GGDPSQHRFLSKAGSRQGRGCPP*GPHTST Trigger: TGTGGATGTGTGGGGGCCGCATGGAGGACATCCCCT...TCCTTGGCGGCTCCCTGCCTTGGAGAGGAACCGGTGCTGTGAGGGATCACCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | TCCACGCTCCCCTGTCTGTCTGTCTGTCTGTCTAGCAAGGCACTAGTAAGTGGTCCAATCCCCCAGGGCTaGCGTCGGGCTGCCGCTCGC | + |
Preference number: 4 (lower is better) Translates to: STLPCLSVCLSSKALVSGPIPQG*RRAAAR Trigger: GCGAGCGGCAGCCCGACGGCAGCCCTGGGGGATTGG...ACCACTTACTAGTGCCTTGCTAGACAGACAGACAGACAGACAGGGGAGCGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | CTCAAGCCTCTGCAGGGGCTCTGTTCCACCTGGCAGCCGGCTGGCAGCACCTCATCTCGGCATCGGTCATaGGGTAAGGCTTCCCCTGTT | + |
Preference number: 4 (lower is better) Translates to: LKPLQGLCSTWQPAGSTSSRHRS*GKASPV Trigger: AACAGGGGAAGCCTTACCCCATGACCGATGCCGAGA...TGAGGTGCTGCCAGCCGGCTGCCAGGTGGAACAGAGCCCCTGCAGAGGCTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CCA 90 bp | GGAGGTGATCCCTCACAGCACCGGTTCCTCTCCAAGGCAGGGAGCCGCCAAGGAGGCCTTCCCGTTTCTTaGTCCGGAGAATCCTCACGC | + |
Preference number: 4 (lower is better) Translates to: GGDPSQHRFLSKAGSRQGGLPVS*SGESSR Trigger: GCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCC...TCCTTGGCGGCTCCCTGCCTTGGAGAGGAACCGGTGCTGTGAGGGATCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | CACACCTCACGAGGCTGTGGCTGTGACGGCATTGGGTaGGACCGAAGCTTCTGGTGCCCTACCGCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: HTSRGCGCDGIG*DRSFWCPTASA Trigger: AGCAGAGGCGGTAGGGCACCAGAAGCTTCGGTCCAACCCAATGCCGTCACAGCCACAGCCTCGTGAGGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | CTGTCCTGTCTCAGGGAGGGCCGCACAAATAGGCAGTaGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTC | + |
Preference number: 4 (lower is better) Translates to: LSCLREGRTNRQ*SLLWGPLGLRF Trigger: GAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGCCCTCCCTGAGACAGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | AACAGTAAGTCCAACAGGCAAGCACCCTGGGTTCCTCGTCTGTCTCCTCCGTGTCCCAAAGCCCCACGTTaGGCAGCAGGACCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: NSKSNRQAPWVPRLSPPCPKAPR*AAGPGP Trigger: CGGCCCTGGTCCTGCTGCCCAACGTGGGGCTTTGGG...ACACGGAGGAGACAGACGAGGAACCCAGGGTGCTTGCCTGTTGGACTTACTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CCA 90 bp | CCACAAGTGAGCTGTGACAGCACAGGGGCTACGTGGAGGTGGTTCTACAGCACCGGTCTCGAGCCTCAGTaGGGAGCCCAGTGTGCCAAG | + |
Preference number: 4 (lower is better) Translates to: PQVSCDSTGATWRWFYSTGLEPQ*GAQCAK Trigger: CTTGGCACACTGGGCTCCCCACTGAGGCTCGAGACC...GGTGCTGTAGAACCACCTCCACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | GGCCCCACCATGTCAGTCCTTCAAGAACCCAGCACCTaGGTGCCCACCGATGCCTCTTCTCCCACAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: GPTMSVLQEPST*VPTDASSPTGG Trigger: TCCTCCTGTGGGAGAAGAGGCATCGGTGGGCACCAAGGTGCTGGGTTCTTGAAGGACTGACATGGTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CAA 72 bp | TACATCTGGCTGCAGAGGAAGGGGCCCCTCGCCTGGTaGCTGGCCAGTGCTAGCTATGGAGCACTCGGAAGT | + |
Preference number: 4 (lower is better) Translates to: YIWLQRKGPLAW*LASASYGALGS Trigger: ACTTCCGAGTGCTCCATAGCTAGCACTGGCCAGCAACCAGGCGAGGGGCCCCTTCCTCTGCAGCCAGATGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | TCCACGCTCCCCTGTCTGTCTGTCTGTCTGTCTAGCAAGGCACTAGTAAGTGGTGGTTCCGGGCCAGGCTaGCTCCGGCAGGGACCTTGT | + |
Preference number: 4 (lower is better) Translates to: STLPCLSVCLSSKALVSGGSGPG*LRQGPC Trigger: ACAAGGTCCCTGCCGGAGTCAGCCTGGCCCGGAACC...ACCACTTACTAGTGCCTTGCTAGACAGACAGACAGACAGACAGGGGAGCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | TGGAGCACTCGGAAGTCCCAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCGGCAGTCGTAGAGGGTaGCTGGGCTGGTGTGGGAGA | + |
Preference number: 4 (lower is better) Translates to: WSTRKSQWPLIALDQHRSGSRRG*LGWCGR Trigger: TCTCCCACACCAGCCCAGTCACCCTCTACGACTGCC...GCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | CAGGGAGCCGCCAAGGAAAAGCACGGAGAAAGGGCTTaGGAAGCATTGGCTGGGAGCTGTTCGGTCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: QGAAKEKHGERA*EALAGSCSVWR Trigger: CCTCCAGACCGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGCGGCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
||
3UTR CAA 72 bp | CCCTGCTGGATTCTGGACACCCACCCACTCCCCTTTTaGACTCCTTCCCAGCCGGCCACTTGTCAGACAGAG | + |
Preference number: 4 (lower is better) Translates to: PCWILDTHPLPF*TPSQPATCQTE Trigger: CTCTGTCTGACAAGTGGCCGGCTGGGAAGGAGTCAAAAAGGGGAGTGGGTGGGTGTCCAGAATCCAGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGATCTCCGGTGGCAGCTaGTGCCCCCAGCATTCGGGT | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVISGGS*CPQHSG Trigger: ACCCGAATGCTGGGGGCATCAGCTGCCACCGGAGAT...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | TCTGACCTCCACATGTGTTGTGGCACACATGGCCCTCACCCACTCTCGCAAGTGGCCAGAGCCACCGCCTaGAAGAGCCGCTTCTCTTTG | + |
Preference number: 4 (lower is better) Translates to: SDLHMCCGTHGPHPLSQVARATA*KSRFSL Trigger: CAAAGAGAAGCGGCTCTTGCAGGCGGTGGCTCTGGC...CACTTGCGAGAGTGGGTGAGGGCCATGTGTGCCACAACACATGTGGAGGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCGGAAGTCCCAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCCGGAGGTTCCACGGGTaGGTAGAACTTGGGCAGGTC | + |
Preference number: 4 (lower is better) Translates to: WSTRKSQWPLIALDQHRSRRFHG*VELGQV Trigger: GACCTGCCCAAGTTCTACCCACCCGTGGAACCTCCG...GCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | GACTTTAGACAAACAGGCTGCCCTGAGCACTGGATGCAGACAGTCTCCTCTGTGCACGACATCTCCAGCTaGGAGGTGGCGGTACTCCGG | + |
Preference number: 4 (lower is better) Translates to: DFRQTGCPEHWMQTVSSVHDISS*EVAVLR Trigger: CCGGAGTACCGCCACCTCTCAGCTGGAGATGTCGTG...CACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | AAATACCCAGAGAGCCAGGGGAGACATCCTTTACATCTGGCTGCAGAGGAAGGGAGAGCCACTGCTGGGTaGGGGAGGAGGGATTGCAGG | + |
Preference number: 4 (lower is better) Translates to: KYPESQGRHPLHLAAEEGRATAG*GRRDCR Trigger: CCTGCAATCCCTCCTCCCTCACCCAGCAGTGGCTCT...CCCTTCCTCTGCAGCCAGATGTAAAGGATGTCTCCCCTGGCTCTCTGGGTATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGGCCAGAGCCACCGCCTaGAAGAGCCGCTTCTCTTTG | + |
Preference number: 4 (lower is better) Translates to: AKEKHGERALEALAGSCSARATA*KSRFSL Trigger: CAAAGAGAAGCGGCTCTTGCAGGCGGTGGCTCTGGC...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGTGTGGTCACTCTCGCTaGAGTCCATGCAGCTGCCGC | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVCGHSR*SPCSCR Trigger: GCGGCAGCTGCATGGACTGCAGCGAGAGTGACCACA...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCAGTCGTAGAGGGTGACTaGGCTGGTGTGGGAGACAGC | + |
Preference number: 4 (lower is better) Translates to: GLKGSHDADFGDPLGRPSVVEGD*AGVGDS Trigger: GCTGTCTCCCACACCAGCCCAGTCACCCTCTACGAC...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGAACTTCTTGGTGTGCTaGGGGTCTCCAGGCCGGATG | + |
Preference number: 4 (lower is better) Translates to: AKEKHGERALEALAGSCSNFLVC*GSPGRM Trigger: CATCCGGCCTGGAGACCCTCAGCACACCAAGAAGTT...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | CAACCTCATGGCTCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGCACGCTGTGAACAGTaGGCAGCAGTGAGGACCAGC | + |
Preference number: 4 (lower is better) Translates to: QPHGSRLPRRFLTLREHAARCEQ*AAVRTS Trigger: GCTGGTCCTCACTGCTGCGCACTGTTCACAGCGTGC...AGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGAGCCATGAGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGGCTGGTTGCCCTTCATaGTGTGGCAGTCGTAGAGGG | + |
Preference number: 4 (lower is better) Translates to: AKEKHGERALEALAGSCSAGCPS*CGSRRG Trigger: CCCTCTACGACTGCCACAGCATGAAGGGCAACCAGC...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GACTTTAGACAAACAGGCTGCCCTGAGCACTGGATGCAGACAGTCTCCTCTGTGTCTCGCTGCAGTCCATaGAGCTGCCGCTCACAGGGT | + |
Preference number: 4 (lower is better) Translates to: DFRQTGCPEHWMQTVSSVSRCSP*SCRSQG Trigger: ACCCTGTGAGCGGCAGCTGCATGGACTGCAGCGAGA...CACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | TATGATGTGAGCAGGCTCCGCCTTCTTGGAGAGCCATaGGTATGGTCTGTTCTCCCCGTGGCCCCACCATGT | + |
Preference number: 4 (lower is better) Translates to: YDVSRLRLLGEP*VWSVLPVAPPC Trigger: ACATGGTGGGGCCACGGGGAGAACAGACCATACCAATGGCTCTCCAAGAAGGCGGAGCCTGCTCACATCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | TCTGCTTGGGTCAGGGGTTGCCTGACACCTGGCTGCTaGCGTTATATGCCCACACGTGCCATGGCTCATCTA | + |
Preference number: 4 (lower is better) Translates to: SAWVRGCLTPGC*RYMPTRAMAHL Trigger: TAGATGAGCCATGGCACGTGTGGGCATATAACGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCCAAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGATATCCTACGCGCTGTaGGTCCCTCCTGATAGCCTC | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVISYAL*VPPDSL Trigger: GAGGCTATCAGGAGGGACGCACAGCGCGTAGGATAT...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GCCGCACAAATAGGCAGTTGTCCCTGCTGTGGGGGCCTCTGGGTCTCAGGTTCTGTGAAGGTAAAGACCTaGATACTGTTCCAAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: AAQIGSCPCCGGLWVSGSVKVKT*ILFQAA Trigger: GGCTGCTTGGAACAGTATGCAGGTCTTTACCTTCAC...AGAACCTGAGACCCAGAGGCCCCCACAGCAGGGACAACTGCCTATTTGTGCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | CAACCTCATGGCTCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTTTTTCCCGGTACGCCTaGTCCACTCTCTCGGCATCG | + |
Preference number: 4 (lower is better) Translates to: QPHGSRLPRRFLTLREHAFSRYA*STLSAS Trigger: CGATGCCGAGAGAGTGGACCAGGCGTACCGGGAAAA...AGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGAGCCATGAGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | TGGAGCACTCGGAAGTCCCAATGGCCTCTCATTGCCCTGGACCAACACAGAAGCTCATTGGGCACACGATaGTCTTCCGGTTCCGAGCAA | + |
Preference number: 4 (lower is better) Translates to: WSTRKSQWPLIALDQHRSSLGTR*SSGSEQ Trigger: TTGCTCGGAACCGGAAGACCATCGTGTGCCCAATGA...GCTTCTGTGTTGGTCCAGGGCAATGAGAGGCCATTGGGACTTCCGAGTGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | GACTTTAGACAAACAGGCTGCCCTGAGCACTGGATGCAGACAGTCTCCTCTGTGAGATGTGGCCCACTCTaGAGCAGGGGATGTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: DFRQTGCPEHWMQTVSSVRCGPL*SRGCPP Trigger: TGGAGGACATCCCCTGCTCCAGAGTGGGCCACATCT...CACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | GGACTGAAGGGGAGTCATGATGCTGACTTTGGAGATCCACTAGGCCGCCCATCACGGGTGGGTAGAACTTaGGCAGGTCCCAGGCAATTT | + |
Preference number: 4 (lower is better) Translates to: GLKGSHDADFGDPLGRPSRVGRT*AGPRQF Trigger: AAATTGCCTGGGACCTGCCCAAGTTCTACCCACCCG...TGATGGGCGGCCTAGTGGATCTCCAAAGTCAGCATCATGACTCCCCTTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGTCAAAGAGCCACTGCTaGGTGAGGGAGGAGGGATTG | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVSKSHC*VREEGL Trigger: CAATCCCTCCTCCCTCACCCAGCAGTGGCTCTTTGA...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGGATTGCAGGTGTTCATaGAGACCCTGTGGTCACTCT | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVDCRCS*RPCGHS Trigger: AGAGTGACCACAGGGTCTTCATGAACACCTGCAATC...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | CAACCTCATGGCTCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGGAGAATCCTCACGCTaGGGAAAAGGGCCATGTAGT | + |
Preference number: 4 (lower is better) Translates to: QPHGSRLPRRFLTLREHAGESSR*GKGPCS Trigger: ACTACATGGCCCTTTTCCCCAGCGTGAGGATTCTCC...AGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGAGCCATGAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | GCTTTTAAAGCCAGAAGCTCTAGTTGGCAGGGCAGGGTAAGACAGCCTGCCTGCGATGACATCGATCATTaGGCACACGATGGTCTTCCG | + |
Preference number: 4 (lower is better) Translates to: AFKARSSSWQGRVRQPACDDIDH*AHDGLP Trigger: CGGAAGACCATCGTGTGCCCAATGATCGATGTCATC...GCAGGCAGGCTGTCTTACCCTGCCCTGCCAACTAGAGCTTCTGGCTTTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR TCA 90 bp | GCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAACTCCAGAACAGTGCGCAGCAGTaGGGACCAGCCCTCGTTGTG | + |
Preference number: 4 (lower is better) Translates to: AMAHLCFQQNHRTFQKLQNSAQQ*GPALVV Trigger: CACAACGAGGGCTGGTCCTCACTGCTGCGCACTGTT...CTGGAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GATGGCAGTGTTCTGCAGACACTTGGAGAATTGCTGGTTCCTGTTCTGAGGGAAATATCCTACGCGCTGTaGGTCCCTCCTGATAGCCTC | + |
Preference number: 4 (lower is better) Translates to: DGSVLQTLGELLVPVLREISYAL*VPPDSL Trigger: GAGGCTATCAGGAGGGACGCACAGCGCGTAGGATAT...TTCCCTCAGAACAGGAACCAGCAATTCTCCAAGTGTCTGCAGAACACTGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR GCA 90 bp | CAACACAGAAGCTGGGCAATTCTAGCAGTTCCCTCAAGAACAGGCAGACTTCCTTGTTCAAAGAGCCACTaGTGGGTGAGGGAGGAGGGA | + |
Preference number: 4 (lower is better) Translates to: QHRSWAILAVPSRTGRLPCSKSH*WVREEG Trigger: TCCCTCCTCCCTCACCCAGCAGTGGCTCTTTGAACA...AGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAATTGCCCAGCTTCTGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | TTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTGGATCTCGGCATCGGTCATaGGGTAAGGCTTCCCCTGTT | + |
Preference number: 4 (lower is better) Translates to: LFLSHCLTLDKQAALSTGSRHRS*GKASPV Trigger: AACAGGGGAAGCCTTACCCCATGACCGATGCCGAGA...TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GGACACTGCTGGCTGATGGCCTCCAGTGCTTCAGGACAGTTAATCTGCATGGAGATAGCCTCCTTGTTATaGCAGTCCTTCAGCCTTTGT | + |
Preference number: 4 (lower is better) Translates to: GHCWLMASSASGQLICMEIASLL*QSFSLC Trigger: ACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTAT...CTCCATGCAGATTAACTGTCCTGAAGCACTGGAGGCCATCAGCCAGCAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGTACCGGAAGTCATCGTaGTCGATGACATCGATCATT | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVYRKSS*SMTSII Trigger: AATGATCGATGTCATCGACCACGATGACTTCCGGTA...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | CACAGAACTTTCCAGAAACTCCAGGGTTCTGTGAGGTaGGAACCACAGCAGTCATTATCTGGGGGAAGCCAC | + |
Preference number: 4 (lower is better) Translates to: HRTFQKLQGSVR*EPQQSLSGGSH Trigger: GTGGCTTCCCCCAGATAATGACTGCTGTGGTTCCAACCTCACAGAACCCTGGAGTTTCTGGAAAGTTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACATAGCCTCCTTGTTATaGCAGTCCTTCAGCCTTTGT | + |
Preference number: 4 (lower is better) Translates to: KAELWPQDHVSVTSLASDIASLL*QSFSLC Trigger: ACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTAT...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GCCGCAACGCAAGATCTATCATTGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTCAAGCTTCGTGTCTGTaGACAGTCCTGTGCCCACAT | + |
Preference number: 4 (lower is better) Translates to: AATQDLSLLAAFKARSSSQASCL*TVLCPH Trigger: ATGTGGGCACAGGACTGTGCACAGACACGAAGCTTG...ACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | GCCTCTGGGTCTCAGGTTCTGCTCTGCACTTTCTGCTaGAAGTCAGACGTAAAGACACTCATTGGGCTCATA | + |
Preference number: 4 (lower is better) Translates to: ASGSQVLLCTFC*KSDVKTLIGLI Trigger: TATGAGCCCAATGAGTGTCTTTACGTCTGACTTCAAGCAGAAAGTGCAGAGCAGAACCTGAGACCCAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | TCAGAGCAGCTCACTGCCGCAACGCAAGATCTATCATaGCTGGCTGCTTTTAAAGCCAGAAGCTCTAGTTGG | + |
Preference number: 4 (lower is better) Translates to: SEQLTAATQDLS*LAAFKARSSSW Trigger: CCAACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGATCTTGCGTTGCGGCAGTGAGCTGCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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3UTR CAA 72 bp | ATGGTGGCAGCAGGGCCCTGGCTCAGCATCAAAACCTaGAACCAAAATATGAGTAGGATTTGCCGGAGAAAG | + |
Preference number: 4 (lower is better) Translates to: MVAAGPWLSIKT*NQNMSRICRRK Trigger: CTTTCTCCGGCAAATCCTACTCATATTTTGGTTCAAGGTTTTGATGCTGAGCCAGGGCCCTGCTGCCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGCTGGTAGATGTATTCTaGGTATTCATCCATCCATAC | + |
Preference number: 4 (lower is better) Translates to: SRLPRRFLTLREHADRLVLVDVF*VFIHPY Trigger: GTATGGATGGATGAATACGCAGAATACATCTACCAG...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CCA 90 bp | CAACACAGAAGCTGGGCAATTCTAGCAGTTCCCTCAAGAACAGGCAGACTTCCTCTAAGACCGTCGAGTTaGTGTGTTCAAAGAGCCACT | + |
Preference number: 4 (lower is better) Translates to: QHRSWAILAVPSRTGRLPLRPSS*CVQRAT Trigger: AGTGGCTCTTTGAACACACCAACTCGACGGTCTTAG...AGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAATTGCCCAGCTTCTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR GCA 90 bp | GCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAACTCCAGAGGGGCTTCTTCAGGTaGTCTCGATCACTGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: AMAHLCFQQNHRTFQKLQRGFFR*SRSLKS Trigger: TGACTTCAGTGATCGAGAGCACCTGAAGAAGCCCCT...CTGGAGTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 90 bp | GGGTCTCCAGGCCGGATGTCCTCCCGCCAGGTGAAGGTAAAGACCTaGATACTGTTCCAAGCAGCCTCGCCTCGGCCCCGGATGCAGGTC | + |
Preference number: 5 (lower is better) Translates to: GSPGRMSSRQVKVKT*ILFQAASPRPRMQV Trigger: GACCTGCATCCGGGGCCGAGGCGAGGCTGCTTGGAACAGTATGCAGGTCTTTACCTTCACCTGGCGGGAGGACATCCGGCCTGGAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 90 bp | CATCGACCAACACAATCTCCGCCACTAGCTCTGGGGGCGAGCGGTTaGGCACGCTGTGAACAGTGCGCAGCAGTGAGGACCAGCCCTCGT | + |
Preference number: 5 (lower is better) Translates to: HRPTQSPPLALGASG*ARCEQCAAVRTSPR Trigger: ACGAGGGCTGGTCCTCACTGCTGCGCACTGTTCACAGCGTGCTCAACCGCTCGCCCCCAGAGCTAGTGGCGGAGATTGTGTTGGTCGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | TCCACATGTGTTGTGGCACACATGGCCCTCACCCACTCTCGCAAGTGTGACAAAGCCCAAAGCCCCACGTaGGGCAGCAGGACCAGGGCC | + |
Preference number: 5 (lower is better) Translates to: STCVVAHMALTHSRKCDKAQSPT*GSRTRA Trigger: GGCCCTGGTCCTGCTGCCCAACGTGGGGCTTTGGGC...TTTGTCACACTTGCGAGAGTGGGTGAGGGCCATGTGTGCCACAACACATGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS TCA 90 bp | GGGCTGGTGTGGGAGACAGCGTCGAAGCAAAACTTCTTGGTGTGCTaGGGGTCTCCAGGCCGGATGTCCTCCCGCCAGGTGAAGGTAAAG | + |
Preference number: 5 (lower is better) Translates to: GLVWETASKQNFLVC*GSPGRMSSRQVKVK Trigger: CTTTACCTTCACCTGGCGGGAGGACATCCGGCCTGGAGACCCTCAGCACACCAAGAAGTTTTGCTTCGACGCTGTCTCCCACACCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 90 bp | GGGCCATGTAGTCCTCCAGGGGCTTCTTCAGGTGCTCTCGATCACTaGAGTCATCGACCAACACAATCTCCGCCACTAGCTCTGGGGGCG | + |
Preference number: 5 (lower is better) Translates to: GPCSPPGASSGALDH*SHRPTQSPPLALGA Trigger: CGCCCCCAGAGCTAGTGGCGGAGATTGTGTTGGTCGATGACTTCAGTGATCGAGAGCACCTGAAGAAGCCCCTGGAGGACTACATGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 90 bp | GTTGAGGGAGACTCGGAGCTTTTTCTGGGCCACGACATCTCCAGCTaGGAGGTGGCGGTACTCCGGCCTGCGCTGGTAGATGTATTCTGC | + |
Preference number: 5 (lower is better) Translates to: VEGDSELFLGHDISS*EVAVLRPALVDVFC Trigger: GCAGAATACATCTACCAGCGCAGGCCGGAGTACCGCCACCTCTCAGCTGGAGATGTCGTGGCCCAGAAAAAGCTCCGAGTCTCCCTCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | TTGTTCCTTTCACACTGCCTGACTTTAGACAAACAGGCTGCCCTGAGCACTGGAGCCCAAAGCCCCACGTaGGGCAGCAGGACCAGGGCC | + |
Preference number: 5 (lower is better) Translates to: LFLSHCLTLDKQAALSTGAQSPT*GSRTRA Trigger: GGCCCTGGTCCTGCTGCCCAACGTGGGGCTTTGGGC...TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGAACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 90 bp | ATCCATTTTCCCGGTACGCCTGGTCCACTCTCTCGGCATCGGTCATaGGGTAAGGCTTCCCCTGTTCTCCATATCCTACGCGCTGTGCGT | + |
Preference number: 5 (lower is better) Translates to: IHFPGTPGPLSRHRS*GKASPVLHILRAVR Trigger: ACGCACAGCGCGTAGGATATGGAGAACAGGGGAAGCCTTACCCCATGACCGATGCCGAGAGAGTGGACCAGGCGTACCGGGAAAATGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS CCA 90 bp | TCCTTATCAGGCCTTCCCGTTTCTTGGTCCGGAGAATCCTCACGCTaGGGAAAAGGGCCATGTAGTCCTCCAGGGGCTTCTTCAGGTGCT | + |
Preference number: 5 (lower is better) Translates to: SLSGLPVSWSGESSR*GKGPCSPPGASSGA Trigger: AGCACCTGAAGAAGCCCCTGGAGGACTACATGGCCCTTTTCCCCAGCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCCTGATAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 90 bp | ATTTCCACAGCTGGTTGCCCTTCATGCTGTGGCAGTCGTAGAGGGTaGCTGGGCTGGTGTGGGAGACAGCGTCGAAGCAAAACTTCTTGG | + |
Preference number: 5 (lower is better) Translates to: ISTAGCPSCCGSRRG*LGWCGRQRRSKTSW Trigger: CCAAGAAGTTTTGCTTCGACGCTGTCTCCCACACCAGCCCAGTCACCCTCTACGACTGCCACAGCATGAAGGGCAACCAGCTGTGGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | GACTTTAGACAAACAGGCTGCCCTGAGCACTGGATGCAGACAGTCTCCTCTGTGGAGGACCAGCCCTCGTaGTGGAAGGGGATGATGATG | + |
Preference number: 5 (lower is better) Translates to: DFRQTGCPEHWMQTVSSVEDQPS*WKGMMM Trigger: CATCATCATCCCCTTCCACAACGAGGGCTGGTCCTC...CACAGAGGAGACTGTCTGCATCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACAGGCCTTCCCGTTTCTaGGTCCGGAGAATCCTCACG | + |
Preference number: 5 (lower is better) Translates to: KAELWPQDHVSVTSLASDRPSRF*VRRILT Trigger: CGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCCT...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | GCCAAGGAAAAGCACGGAGAAAGGGCTTTGGAAGCATTGGCTGGGAGCTGTTCGGTGAGGGAGGAGGGATaGCAGGTGTTCATGAAGACC | + |
Preference number: 5 (lower is better) Translates to: AKEKHGERALEALAGSCSVREEG*QVFMKT Trigger: GGTCTTCATGAACACCTGCAATCCCTCCTCCCTCAC...CGAACAGCTCCCAGCCAATGCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 90 bp | TTGGGATCCGTTTGTAATACATTTCCCAGTCGAAGGCACCACGCATaGCGTCCCCAGCCTGAGTCTCATACCGGAAGTCATCGTGGTCGA | + |
Preference number: 5 (lower is better) Translates to: LGSVCNTFPSRRHHA*RPQPESHTGSHRGR Trigger: TCGACCACGATGACTTCCGGTATGAGACTCAGGCTGGGGACGCCATGCGTGGTGCCTTCGACTGGGAAATGTATTACAAACGGATCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | CAGAGGCTGTCCTCTGACCTCCACATGTGTTGTGGCACACATGGCCCTCACCCACCAGTCCTTCAGCCTTaGTTCAGCTCCCAAGAAAAA | + |
Preference number: 5 (lower is better) Translates to: QRLSSDLHMCCGTHGPHPPVLQP*FSSQEK Trigger: TTTTTCTTGGGAGCTGAACAAAGGCTGAAGGACTGG...TGGGTGAGGGCCATGTGTGCCACAACACATGTGGAGGTCAGAGGACAGCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108846.2 |
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CDS-3UTR CAA 90 bp | CCACAAGTGAGCTGTGACAGCACAGGGGCTACGTGGAGGTGGTTCTACAGCACCAGGTCCCAGGCAATTTaGGTCATAAACCACTTGAAG | + |
Preference number: 5 (lower is better) Translates to: PQVSCDSTGATWRWFYSTRSQAI*VINHLK Trigger: CTTCAAGTGGTTTATGACCAAAATTGCCTGGGACCT...GGTGCTGTAGAACCACCTCCACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | TCCACGCTCCCCTGTCTGTCTGTCTGTCTGTCTAGCAAGGCACTAGTAAGTGGTTATTTCCACAGCTGGTaGCCCTTCATGCTGTGGCAG | + |
Preference number: 5 (lower is better) Translates to: STLPCLSVCLSSKALVSGYFHSW*PFMLWQ Trigger: CTGCCACAGCATGAAGGGCAACCAGCTGTGGAAATA...ACCACTTACTAGTGCCTTGCTAGACAGACAGACAGACAGACAGGGGAGCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | AAATACCCAGAGAGCCAGGGGAGACATCCTTTACATCTGGCTGCAGAGGAAGGGTACAGCGTCTTGTCCTaGCGGTATTTCCACAGCTGG | + |
Preference number: 5 (lower is better) Translates to: KYPESQGRHPLHLAAEEGYSVLS*RYFHSW Trigger: CCAGCTGTGGAAATACCGCAAGGACAAGACGCTGTA...CCCTTCCTCTGCAGCCAGATGTAAAGGATGTCTCCCCTGGCTCTCTGGGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | TCAAGGCTGCCCAGGCGATTCCTAACACTTAGGGAACATGCTGACAGGCTGGTGTCTAAGACCGTCGAGTaGGTGTGTTCAAAGAGCCAC | + |
Preference number: 5 (lower is better) Translates to: SRLPRRFLTLREHADRLVSKTVE*VCSKSH Trigger: GTGGCTCTTTGAACACACCAACTCGACGGTCTTAGA...CACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAATCGCCTGGGCAGCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 90 bp | AAATTCTCTAAGACCGTCGAGTTGGTGTGTTCAAAGAGCCACTGCTaGGTGAGGGAGGAGGGATTGCAGGTGTTCATGAAGACCCTGTGG | + |
Preference number: 5 (lower is better) Translates to: KFSKTVELVCSKSHC*VREEGLQVFMKTLW Trigger: CCACAGGGTCTTCATGAACACCTGCAATCCCTCCTCCCTCACCCAGCAGTGGCTCTTTGAACACACCAACTCGACGGTCTTAGAGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACCCACACATCCACACCTaGAAGGAGATCTCATACTGC | + |
Preference number: 5 (lower is better) Translates to: KAELWPQDHVSVTSLASDPHIHT*KEISYC Trigger: GCAGTATGAGATCTCCTTCAAGGTGTGGATGTGTGG...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | GCTTTTAAAGCCAGAAGCTCTAGTTGGCAGGGCAGGGTAAGACAGCCTGCCTGCTTGAAGCTCTTACAGTaGAGGGAGACTCGGAGCTTT | + |
Preference number: 5 (lower is better) Translates to: AFKARSSSWQGRVRQPACLKLLQ*RETRSF Trigger: AAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTTCAA...GCAGGCAGGCTGTCTTACCCTGCCCTGCCAACTAGAGCTTCTGGCTTTAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | AAGGCAGAGCTCTGGCCTCAGGACCATGTCTCAGTTACTTCACTGGCAAGTGACCCAGTCCTTCAGCCTTaGTTCAGCTCCCAAGAAAAA | + |
Preference number: 5 (lower is better) Translates to: KAELWPQDHVSVTSLASDPVLQP*FSSQEK Trigger: TTTTTCTTGGGAGCTGAACAAAGGCTGAAGGACTGG...GTCACTTGCCAGTGAAGTAACTGAGACATGGTCCTGAGGCCAGAGCTCTGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 90 bp | CCATATCCTACGCGCTGTGCGTCCCTCCTGATAGCCTCCTTGTTATaGCAGTCCTTCAGCCTTTGTTCAGCTCCCAAGAAAAATGTCTTT | + |
Preference number: 5 (lower is better) Translates to: PYPTRCASLLIASLL*QSFSLCSAPKKNVF Trigger: AAAGACATTTTTCTTGGGAGCTGAACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAGCGCGTAGGATATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS-3UTR CAA 90 bp | ACACGTGCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAACTCCTGATAGCCTCCTaGTTATGCCAGTCCTTCAGC | + |
Preference number: 5 (lower is better) Translates to: TRAMAHLCFQQNHRTFQKLLIAS*LCQSFS Trigger: GCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAG...TTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS-3UTR CAA 90 bp | ACACGTGCCATGGCTCATCTATGCTTTCAACAGAACCACAGAACTTTCCAGAAAGGGAGCCAGTTGACGTaGGCTTCACAGTGTGAATCT | + |
Preference number: 5 (lower is better) Translates to: TRAMAHLCFQQNHRTFQKGSQLT*ASQCES Trigger: AGATTCACACTGTGAAGCCAACGTCAACTGGCTCCC...TTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCACGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 72 bp | CTCGCCTCGGCCCCGGATGCAGGTCTCGAGCCTCAGTaGGGAGCCCAGTGTGCCAAGCTTCGTGTCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: LASAPDAGLEPQ*GAQCAKLRVCA Trigger: TGCACAGACACGAAGCTTGGCACACTGGGCTCCCCACTGAGGCTCGAGACCTGCATCCGGGGCCGAGGCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 72 bp | GGATGCAGGTCTCGAGCCTCAGTGGGGAGCCCAGTGTaGCAAGCTTCGTGTCTGTGCACAGTCCTGTGCCCA | + |
Preference number: 6 (lower is better) Translates to: GCRSRASVGSPV*QASCLCTVLCP Trigger: TGGGCACAGGACTGTGCACAGACACGAAGCTTGGCACACTGGGCTCCCCACTGAGGCTCGAGACCTGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 72 bp | ATACCTCTGCCACTCGCTTCAGGTTCCGGGCCAGGCTaGCTCCGGCAGGGACCTTGTAGGGCACATACTTCC | + |
Preference number: 6 (lower is better) Translates to: IPLPLASGSGPG*LRQGPCRAHTS Trigger: GGAAGTATGTGCCCTACAAGGTCCCTGCCGGAGTCAGCCTGGCCCGGAACCTGAAGCGAGTGGCAGAGGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 72 bp | TGGGAGACAGCGTCGAAGCAAAACTTCTTGGTGTGCTaGGGGTCTCCAGGCCGGATGTCCTCCCGCCAGGTG | + |
Preference number: 6 (lower is better) Translates to: WETASKQNFLVC*GSPGRMSSRQV Trigger: CACCTGGCGGGAGGACATCCGGCCTGGAGACCCTCAGCACACCAAGAAGTTTTGCTTCGACGCTGTCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 72 bp | CCCGGTACGCCTGGTCCACTCTCTCGGCATCGGTCATaGGGTAAGGCTTCCCCTGTTCTCCATATCCTACGC | + |
Preference number: 6 (lower is better) Translates to: PGTPGPLSRHRS*GKASPVLHILR Trigger: GCGTAGGATATGGAGAACAGGGGAAGCCTTACCCCATGACCGATGCCGAGAGAGTGGACCAGGCGTACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS CCA 72 bp | GGCTGGTGTGGGAGACAGCGTCGAAGCAAAACTTCTTaGTGTGCTGAGGGTCTCCAGGCCGGATGTCCTCCC | + |
Preference number: 6 (lower is better) Translates to: GWCGRQRRSKTS*CAEGLQAGCPP Trigger: GGGAGGACATCCGGCCTGGAGACCCTCAGCACACCAAGAAGTTTTGCTTCGACGCTGTCTCCCACACCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 72 bp | GCTGGTTGCCCTTCATGCTGTGGCAGTCGTAGAGGGTaGCTGGGCTGGTGTGGGAGACAGCGTCGAAGCAAA | + |
Preference number: 6 (lower is better) Translates to: AGCPSCCGSRRG*LGWCGRQRRSK Trigger: TTTGCTTCGACGCTGTCTCCCACACCAGCCCAGTCACCCTCTACGACTGCCACAGCATGAAGGGCAACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 72 bp | GGCCTTCCCGTTTCTTGGTCCGGAGAATCCTCACGCTaGGGAAAAGGGCCATGTAGTCCTCCAGGGGCTTCT | + |
Preference number: 6 (lower is better) Translates to: GLPVSWSGESSR*GKGPCSPPGAS Trigger: AGAAGCCCCTGGAGGACTACATGGCCCTTTTCCCCAGCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CAA 72 bp | CCCAGCATTCGGGTCCTTATCAGGCCTTCCCGTTTCTaGGTCCGGAGAATCCTCACGCTGGGGAAAAGGGCC | + |
Preference number: 6 (lower is better) Translates to: PSIRVLIRPSRF*VRRILTLGKRA Trigger: GGCCCTTTTCCCCAGCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCCTGATAAGGACCCGAATGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CCA 72 bp | CCAGCATTCGGGTCCTTATCAGGCCTTCCCGTTTCTTaGTCCGGAGAATCCTCACGCTGGGGAAAAGGGCCA | + |
Preference number: 6 (lower is better) Translates to: PAFGSLSGLPVS*SGESSRWGKGP Trigger: TGGCCCTTTTCCCCAGCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCCTGATAAGGACCCGAATGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 72 bp | CGACATCTCCAGCTGAGAGGTGGCGGTACTCCGGCCTaGGCTGGTAGATGTATTCTGCGTATTCATCCATCC | + |
Preference number: 6 (lower is better) Translates to: RHLQLRGGGTPA*AGRCILRIHPS Trigger: GGATGGATGAATACGCAGAATACATCTACCAGCGCAGGCCGGAGTACCGCCACCTCTCAGCTGGAGATGTCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 72 bp | GTAAGGCTTCCCCTGTTCTCCATATCCTACGCGCTGTaGGTCCCTCCTGATAGCCTCCTTGTTATGCCAGTC | + |
Preference number: 6 (lower is better) Translates to: VRLPLFSISYAL*VPPDSLLVMPV Trigger: GACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAGCGCGTAGGATATGGAGAACAGGGGAAGCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS CCA 72 bp | AAGCTCTTACAGTTGAGGGAGACTCGGAGCTTTTTCTaGGCCACGACATCTCCAGCTGAGAGGTGGCGGTAC | + |
Preference number: 6 (lower is better) Translates to: KLLQLRETRSFF*ATTSPAERWRY Trigger: GTACCGCCACCTCTCAGCTGGAGATGTCGTGGCCCAGAAAAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CAA 72 bp | TATCCTACGCGCTGTGCGTCCCTCCTGATAGCCTCCTaGTTATGCCAGTCCTTCAGCCTTTGTTCAGCTCCC | + |
Preference number: 6 (lower is better) Translates to: YPTRCASLLIAS*LCQSFSLCSAP Trigger: GGGAGCTGAACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAGCGCGTAGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS TCA 72 bp | AGTCCTCCAGGGGCTTCTTCAGGTGCTCTCGATCACTaGAGTCATCGACCAACACAATCTCCGCCACTAGCT | + |
Preference number: 6 (lower is better) Translates to: SPPGASSGALDH*SHRPTQSPPLA Trigger: AGCTAGTGGCGGAGATTGTGTTGGTCGATGACTTCAGTGATCGAGAGCACCTGAAGAAGCCCCTGGAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS TCA 72 bp | CAGCCTGAGTCTCATACCGGAAGTCATCGTGGTCGATaGCATCGATCATTGGGCACACGATGGTCTTCCGGT | + |
Preference number: 6 (lower is better) Translates to: QPESHTGSHRGR*HRSLGTRWSSG Trigger: ACCGGAAGACCATCGTGTGCCCAATGATCGATGTCATCGACCACGATGACTTCCGGTATGAGACTCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS GCA 72 bp | ACGCGCTGTGCGTCCCTCCTGATAGCCTCCTTGTTATaGCAGTCCTTCAGCCTTTGTTCAGCTCCCAAGAAA | + |
Preference number: 6 (lower is better) Translates to: TRCASLLIASLL*QSFSLCSAPKK Trigger: TTTCTTGGGAGCTGAACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAGCGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS CCA 72 bp | GTTTGTAATACATTTCCCAGTCGAAGGCACCACGCATaGCGTCCCCAGCCTGAGTCTCATACCGGAAGTCAT | + |
Preference number: 6 (lower is better) Translates to: VCNTFPSRRHHA*RPQPESHTGSH Trigger: ATGACTTCCGGTATGAGACTCAGGCTGGGGACGCCATGCGTGGTGCCTTCGACTGGGAAATGTATTACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CAA 90 bp | TGTTCTCCATATCCTACGCGCTGTGCGTCCCTCCTGATAGCCTCCTaGTTATGCCAGTCCTTCAGCCTTTGTTCAGCTCCCAAGAAAAAT | + |
Preference number: 6 (lower is better) Translates to: CSPYPTRCASLLIAS*LCQSFSLCSAPKKN Trigger: ATTTTTCTTGGGAGCTGAACAAAGGCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAGCGCGTAGGATATGGAGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066987.14 ENSMUST00000108846.2 |
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CDS CAA 90 bp | AGGTCCCAGGCAATTTTGGTCATAAACCACTTGAAGCTCTTACAGTaGAGGGAGACTCGGAGCTTTTTCTGGGCCACGACATCTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: RSQAILVINHLKLLQ*RETRSFFWATTSPA Trigger: AGCTGGAGATGTCGTGGCCCAGAAAAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTTCAAGTGGTTTATGACCAAAATTGCCTGGGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CAA 72 bp | TTGGGCAGGTCCCAGGCAATTTTGGTCATAAACCACTaGAAGCTCTTACAGTTGAGGGAGACTCGGAGCTTT | + |
Preference number: 6 (lower is better) Translates to: LGRSQAILVINH*KLLQLRETRSF Trigger: AAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTTCAAGTGGTTTATGACCAAAATTGCCTGGGACCTGCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |
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CDS CAA 72 bp | GCAATTTTGGTCATAAACCACTTGAAGCTCTTACAGTaGAGGGAGACTCGGAGCTTTTTCTGGGCCACGACA | + |
Preference number: 6 (lower is better) Translates to: AILVINHLKLLQ*RETRSFFWATT Trigger: TGTCGTGGCCCAGAAAAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTTCAAGTGGTTTATGACCAAAATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066987.14 |