Pregenerated sensors for GALM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035473Ensembl transcript IDs: ENSMUST00000039205.11, ENSMUST00000133955.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCACTGTTGGTGTGAGGCTCCTGCCTCCTATGCCTGTGCGTCTTaGTACACCTTAGCCAAGCTCCTAGTTAATCTCAAAGGCAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: GHCWCEAPASYACAS*YTLAKLLVNLKGRK Trigger: TTTTCTGCCTTTGAGATTAACTAGGAGCTTGGCTAAGGTGTAGCAAGACGCACAGGCATAGGAGGCAGGAGCCTCACACCAACAGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR TCA 90 bp | AGACCCTGCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTaGGGTAGAGGCACAGAGGGAGACTTTAATTCTCACAGCTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: RPCLSFSDPRNVQAD*GRGTEGDFNSHSLN Trigger: GTTCAAGCTGTGAGAATTAAAGTCTCCCTCTGTGCCTCTACCTCAATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR TCA 90 bp | CAGATTGAGGTAGAGGCACAGAGGGAGACTTTAATTCTCACAGCTTaGACTCAAGAGCTGGTTAAAACTTCTGGAGGGGGTAGTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: QIEVEAQRETLILTA*TQELVKTSGGGSLR Trigger: CCTCAGACTACCCCCTCCAGAAGTTTTAACCAGCTCTTGAGTTCAAGCTGTGAGAATTAAAGTCTCCCTCTGTGCCTCTACCTCAATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR TCA 90 bp | AAAGGAAATAGACAAGATGGAACCAGGATGGAAAGATGGAACCTATaGAATCAGGAGAGTCCACAGGACCACTTCTCTACCAGGATCAGA | + |
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Preference number: 1 (lower is better) Translates to: KGNRQDGTRMERWNL*NQESPQDHFSTRIR Trigger: TCTGATCCTGGTAGAGAAGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTCCATCTTGTCTATTTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 90 bp | GCACTAGACAGAGAACAGAGCTGGTCATTAGACATAGTCTGTAGCTaGTGGGAAAGGGTATCAGTATTCACATTGATTATTATGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ALDREQSWSLDIVCS*WERVSVFTLIIMAA Trigger: AGCAGCCATAATAATCAATGTGAATACTGATACCCTTTCCCAGCAGCTACAGACTATGTCTAATGACCAGCTCTGTTCTCTGTCTAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR CCA 90 bp | CTAGACAGAGAACAGAGCTGGTCATTAGACATAGTCTGTAGCTGCTaGGAAAGGGTATCAGTATTCACATTGATTATTATGGCTGCTACG | + |
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Preference number: 1 (lower is better) Translates to: LDREQSWSLDIVCSC*ERVSVFTLIIMAAT Trigger: CGTAGCAGCCATAATAATCAATGTGAATACTGATACCCTTTCCCAGCAGCTACAGACTATGTCTAATGACCAGCTCTGTTCTCTGTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR CCA 90 bp | AAAGAAAGGAAGGCGTTAAAGGAAATAGACAAGATGGAACCAGGATaGAAAGATGGAACCTATGAAATCAGGAGAGTCCACAGGACCACT | + |
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Preference number: 1 (lower is better) Translates to: KERKALKEIDKMEPG*KDGTYEIRRVHRTT Trigger: AGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTCCATCTTGTCTATTTCCTTTAACGCCTTCCTTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR TCA 90 bp | GATTTATTTTTAACTGTTGTGGATGTGTGGGTGCGCATGAGTGTGGGATTCCCACTGGAGGGGGTAGTCTaGGGTCAAAGAGGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLFLTVVDVWVRMSVGFPLEGVV*GQRGGR Trigger: CCTGCCTCCTCTTTGACCTCAGACTACCCCCTCCAG...TGGGAATCCCACACTCATGCGCACCCACACATCCACAACAGTTAAAAATAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGAGGTAGAGGCACAGGACATAGTCTGTAGCTaGTGGGAAAGGGTATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: ACPSVTLGMFRQIEVEAQDIVCS*WERVSV Trigger: TACTGATACCCTTTCCCAGCAGCTACAGACTATGTC...CTGTGCCTCTACCTCAATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTGCAAGAGCAGTGTGTGTTCTTCACTGCTCAGCCATCTCTAGCTCCTACATAGTCTGTAGCTGCTaGGAAAGGGTATCAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: SSARAVCVLHCSAISSSYIVCSC*ERVSVF Trigger: GAATACTGATACCCTTTCCCAGCAGCTACAGACTAT...GTAGGAGCTAGAGATGGCTGAGCAGTGAAGAACACACACTGCTCTTGCAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCCAAGACCCTGCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGACAGAGAACAGAGCTaGTCATTAGACATAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: RVQDPACPSVTLGMFRQIDREQS*SLDIVC Trigger: ACAGACTATGTCTAATGACCAGCTCTGTTCTCTGTC...AATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCTTCACTGCTCAGCCATCTCTAGCTCCTACGGTAAGTCTGAGAAGAAAGAAAGATGGAACCTATaGAATCAGGAGAGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: CVLHCSAISSSYGKSEKKERWNL*NQESPQ Trigger: CTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTC...TTTCTTCTCAGACTTACCGTAGGAGCTAGAGATGGCTGAGCAGTGAAGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 72 bp | AGAAGAAAGGCTCTGACGGAGCAGGGTCCAAGACCCTaGTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RRKALTEQGPRP*LSFSDPRNVQA Trigger: TGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCTGCTCCGTCAGAGCCTTTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 72 bp | CTCTGGTCCTCTGCAAGAGCAGTGTGTGTTCTTCACTaGTCAGCCATCTCTAGCTCCTACGGTAAGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LWSSARAVCVLH*SAISSSYGKSE Trigger: CTCAGACTTACCGTAGGAGCTAGAGATGGCTGAGCAGTGAAGAACACACACTGCTCTTGCAGAGGACCAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 72 bp | TGGTGTGAGGCTCCTGCCTCCTATGCCTGTGCGTCTTaGTACACCTTAGCCAAGCTCCTAGTTAATCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: WCEAPASYACAS*YTLAKLLVNLK Trigger: TTTGAGATTAACTAGGAGCTTGGCTAAGGTGTAGCAAGACGCACAGGCATAGGAGGCAGGAGCCTCACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTCCACAGGACCACTTCTCTACCAGGATCAGACCTTAGGCGATGGCACTGTATCAGTATTCACATaGATTATTATGGCTGCTACG | + |
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Preference number: 3 (lower is better) Translates to: GESTGPLLYQDQTLGDGTVSVFT*IIMAAT Trigger: CGTAGCAGCCATAATAATCAATGTGAATACTGATAC...AGTGCCATCGCCTAAGGTCTGATCCTGGTAGAGAAGTGGTCCTGTGGACTCTCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR TCA 72 bp | AGACAAGATGGAACCAGGATGGAAAGATGGAACCTATaGAATCAGGAGAGTCCACAGGACCACTTCTCTACC | + |
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Preference number: 3 (lower is better) Translates to: RQDGTRMERWNL*NQESPQDHFST Trigger: GGTAGAGAAGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTCCATCTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR TCA 72 bp | GTAGAGGCACAGAGGGAGACTTTAATTCTCACAGCTTaGACTCAAGAGCTGGTTAAAACTTCTGGAGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: VEAQRETLILTA*TQELVKTSGGG Trigger: ACCCCCTCCAGAAGTTTTAACCAGCTCTTGAGTTCAAGCTGTGAGAATTAAAGTCTCCCTCTGTGCCTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 72 bp | AGAGAACAGAGCTGGTCATTAGACATAGTCTGTAGCTaGTGGGAAAGGGTATCAGTATTCACATTGATTATT | + |
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Preference number: 3 (lower is better) Translates to: REQSWSLDIVCS*WERVSVFTLII Trigger: AATAATCAATGTGAATACTGATACCCTTTCCCAGCAGCTACAGACTATGTCTAATGACCAGCTCTGTTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR GCA 72 bp | GGAAAGGGTATCAGTATTCACATTGATTATTATGGCTaGTACGATCTGTATGATTTAACACGCAGGATTACT | + |
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Preference number: 3 (lower is better) Translates to: GKGISIHIDYYG*YDLYDLTRRIT Trigger: AGTAATCCTGCGTGTTAAATCATACAGATCGTAGCAGCCATAATAATCAATGTGAATACTGATACCCTTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | GGAGAGTCCACAGGACCACTTCTCTACCAGGATCAGACCTTAGGCGATGGCACTCAGGATCCTCCCACTTaGAGCGTGACGCACCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GESTGPLLYQDQTLGDGTQDPPT*SVTHPC Trigger: GCAAGGGTGCGTCACGCTGCAAGTGGGAGGATCCTG...AGTGCCATCGCCTAAGGTCTGATCCTGGTAGAGAAGTGGTCCTGTGGACTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | CCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGAGGTAGAGGCACAGAGGGAGAGAACTGGACGCCATTaGTCAACACCTGAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PSVTLGMFRQIEVEAQRERTGRH*STPEGS Trigger: GGACCCCTCAGGTGTTGACCAATGGCGTCCAGTTCT...CTCCCTCTGTGCCTCTACCTCAATCTGCCTGAACATTCCTAGGGTCACTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR CAA 72 bp | AGAAAGGCTCTGACGGAGCAGGGTCCAAGACCCTGCTaGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: RKALTEQGPRPC*SFSDPRNVQAD Trigger: ATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCTGCTCCGTCAGAGCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | GAACCAGGATGGAAAGATGGAACCTATGAAATCAGGAGAGTCCACAGGACCACTCTCGAGGCAGAGACCTaGGTGCTTGGGATACACCGC | + |
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Preference number: 4 (lower is better) Translates to: EPGWKDGTYEIRRVHRTTLEAET*VLGIHR Trigger: GCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAG...AGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAAGACCCTGCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGGAACTGGGGCTGATTaGCCGAATCAGGCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RVQDPACPSVTLGMFRQIGTGAD*PNQASS Trigger: AGAACTGGCCTGATTCGGTCAATCAGCCCCAGTTCC...AATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | GCCTGTGCGTCTTGCTACACCTTAGCCAAGCTCCTAGTTAATCTCAAAGGCAGAGATCGTGCAGCCCCATaGGATGATGTCCACACTCAG | + |
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Preference number: 4 (lower is better) Translates to: ACASCYTLAKLLVNLKGRDRAAP*DDVHTQ Trigger: CTGAGTGTGGACATCATCTCATGGGGCTGCACGATC...TCTGCCTTTGAGATTAACTAGGAGCTTGGCTAAGGTGTAGCAAGACGCACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | TTAACACGCAGGATTACTTTTAAAGCAAGGCAGGTGAGTGGGGACCGGGTCTCACCTCACCATCTGGACTaGCTCGAAAGAACTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: LTRRITFKARQVSGDRVSPHHLD*LERTGR Trigger: GCGTCCAGTTCTTTCGAGTCAGTCCAGATGGTGAGG...TGAGACCCGGTCCCCACTCACCTGCCTTGCTTTAAAAGTAATCCTGCGTGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | TCAGCCATCTCTAGCTCCTACGGTAAGTCTGAGAAGAAAGGCTCTGACGGAGCATGTTCCAAGCTCCACTaGCTTTCTCAGGTCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SAISSSYGKSEKKGSDGACSKLH*LSQVEG Trigger: GCCTTCGACCTGAGAAAGCCAGTGGAGCTTGGAACA...TGCTCCGTCAGAGCCTTTCTTCTCAGACTTACCGTAGGAGCTAGAGATGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | GCCTGTGCGTCTTGCTACACCTTAGCCAAGCTCCTAGTTAATCTCAAAGGCAGAGGCAGTTCCTTCCACTaGAGCAATGACTCCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ACASCYTLAKLLVNLKGRGSSFH*SNDSCW Trigger: CCAACAGGAGTCATTGCTCCAGTGGAAGGAACTGCC...TCTGCCTTTGAGATTAACTAGGAGCTTGGCTAAGGTGTAGCAAGACGCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | TCCTCTGCAAGAGCAGTGTGTGTTCTTCACTGCTCAGCCATCTCTAGCTCCTACCCTGGCCTGCTAGGTTaGAATAAGAATGGTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSARAVCVLHCSAISSSYPGLLG*NKNGWS Trigger: TGACCAACCATTCTTATTTCAACCTAGCAGGCCAGG...GTAGGAGCTAGAGATGGCTGAGCAGTGAAGAACACACACTGCTCTTGCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | TCAGCCATCTCTAGCTCCTACGGTAAGTCTGAGAAGAAAGGCTCTGACGGAGCAATCCACGGGCAAATATaGATCTGCTGCAATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SAISSSYGKSEKKGSDGAIHGQI*ICCNGD Trigger: GTCACCATTGCAGCAGATGCATATTTGCCCGTGGAT...TGCTCCGTCAGAGCCTTTCTTCTCAGACTTACCGTAGGAGCTAGAGATGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| 3UTR CAA 72 bp | TTTCATCTCAAGGGAGCATCTACTTCTAGTGCACAGTaGAATGCTACGGGCACTGTTGGTGTGAGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FHLKGASTSSAQ*NATGTVGVRLL Trigger: CAGGAGCCTCACACCAACAGTGCCCGTAGCATTCAACTGTGCACTAGAAGTAGATGCTCCCTTGAGATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | AAGATGGAACCTATGAAATCAGGAGAGTCCACAGGACCACTTCTCTACCAGGATCACACTCAGCTGGTCTaGCCGAAGCTGGAATTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KMEPMKSGESTGPLLYQDHTQLV*PKLEFL Trigger: GAGAAATTCCAGCTTCGGTCAGACCAGCTGAGTGTG...ATCCTGGTAGAGAAGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | AGATGGAACCAGGATGGAAAGATGGAACCTATGAAATCAGGAGAGTCCACAGGATGCCTGTCTTTGACCTaGAGAGCAGTGATCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RWNQDGKMEPMKSGESTGCLSLT*RAVIVQ Trigger: CTGCACGATCACTGCTCTGCAGGTCAAAGACAGGCA...TCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | AGGGTCCAAGACCCTGCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTCAAATATGCATCTGCTaGAATGGTGACTTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: RVQDPACPSVTLGMFRQIQICIC*NGDFMV Trigger: GACCATGAAGTCACCATTGCAGCAGATGCATATTTG...AATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | GCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGAGGTAGAGGCACAGAGCAATGACTCCTGTTaGAATCAGAGTTTCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: ACPSVTLGMFRQIEVEAQSNDSC*NQSFIH Trigger: GTGGATGAAACTCTGATTCCAACAGGAGTCATTGCT...CTGTGCCTCTACCTCAATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR TCA 90 bp | GACATAGTCTGTAGCTGCTGGGAAAGGGTATCAGTATTCACATTGATTATTATGTGCAGCCCCATGAGATaGTGTCCACACTCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DIVCSCWERVSVFTLIIMCSPMR*CPHSAG Trigger: ACCAGCTGAGTGTGGACATCATCTCATGGGGCTGCA...CATAATAATCAATGTGAATACTGATACCCTTTCCCAGCAGCTACAGACTATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | GATTTATTTTTAACTGTTGTGGATGTGTGGGTGCGCATGAGTGTGGGATTCCCAGGGCAAATATGCATCTaGTGCAATGGTGACTTCATG | + |
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Preference number: 4 (lower is better) Translates to: DLFLTVVDVWVRMSVGFPGQICI*CNGDFM Trigger: CATGAAGTCACCATTGCAGCAGATGCATATTTGCCC...TGGGAATCCCACACTCATGCGCACCCACACATCCACAACAGTTAAAAATAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | GAACCAGGATGGAAAGATGGAACCTATGAAATCAGGAGAGTCCACAGGACCACTTTCAGACAGAAATTATaGTCGAAACCATGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: EPGWKDGTYEIRRVHRTTFRQKL*SKPWMW Trigger: CCACATCCATGGTTTCGACCATAATTTCTGTCTGAA...AGTGGTCCTGTGGACTCTCCTGATTTCATAGGTTCCATCTTTCCATCCTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | AAAACAGAGTTCTGTCAAAGAAAGGAAGGCGTTAAAGGAAATAGACAAGATGGAGAATCAGGCCAGTTCTaGGTCTCGAGGCAGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: KTEFCQRKEGVKGNRQDGESGQF*VSRQRP Trigger: AGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTC...TCCATCTTGTCTATTTCCTTTAACGCCTTCCTTTCTTTGACAGAACTCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | GACATAGTCTGTAGCTGCTGGGAAAGGGTATCAGTATTCACATTGATTATTATGTGGTCTGACCGAAGCTaGAATTTCTCCACTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: DIVCSCWERVSVFTLIIMWSDRS*NFSTVP Trigger: AGGGACAGTGGAGAAATTCCAGCTTCGGTCAGACCA...CATAATAATCAATGTGAATACTGATACCCTTTCCCAGCAGCTACAGACTATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | GTCAAAGAGGAGGCAGGAAAACAGAGTTCTGTCAAAGAAAGGAAGGCGTTAAAGGTAAAACTGGACGCCTaGTTGTGTGGTATATACTTC | + |
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Preference number: 4 (lower is better) Translates to: VKEEAGKQSSVKERKALKVKLDA*LCGIYF Trigger: GAAGTATATACCACACAACCAGGCGTCCAGTTTTAC...CTTTAACGCCTTCCTTTCTTTGACAGAACTCTGTTTTCCTGCCTCCTCTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR CCA 90 bp | AAAACAGAGTTCTGTCAAAGAAAGGAAGGCGTTAAAGGAAATAGACAAGATGGATTGAACCAGGTAGTGTaGTTGTATTCCTCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KTEFCQRKEGVKGNRQDGLNQVV*LYSSPG Trigger: GCCTGGAGAGGAATACAACCACACTACCTGGTTCAA...TCCATCTTGTCTATTTCCTTTAACGCCTTCCTTTCTTTGACAGAACTCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS-3UTR GCA 90 bp | TATTATGGCTGCTACGATCTGTATGATTTAACACGCAGGATTACTTTTAAAGCAAGCGTGACGCACCCTTaGACAAAACTTCTTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YYGCYDLYDLTRRITFKASVTHP*TKLLFF Trigger: AAAGAAAAGAAGTTTTGTGCAAGGGTGCGTCACGCT...TGCTTTAAAAGTAATCCTGCGTGTTAAATCATACAGATCGTAGCAGCCATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS GCA 90 bp | CCTTCCAATTCCGCAAAGCCAAGCACCACGTCTGAGGCTTTCCCCTaGCTGTCTTTGACCTGCAGAGCAGTGATCGTGCAGCCCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: PSNSAKPSTTSEAFP*LSLTCRAVIVQPHE Trigger: CTCATGGGGCTGCACGATCACTGCTCTGCAGGTCAAAGACAGGCAGGGGAAAGCCTCAGACGTGGTGCTTGGCTTTGCGGAATTGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS TCA 90 bp | CCCAGACTTTCAGCTCTCCAGGGTAGCCTTCCTCACCATCTGGACTaGCTCGAAAGAACTGGACGCCATTGGTCAACACCTGAGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PRLSALQGSLPHHLD*LERTGRHWSTPEGS Trigger: GGACCCCTCAGGTGTTGACCAATGGCGTCCAGTTCTTTCGAGTCAGTCCAGATGGTGAGGAAGGCTACCCTGGAGAGCTGAAAGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
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| CDS TCA 90 bp | TGGATCGACGCCACTCGGACAAGCGAGCTTGTGGCTTTACCTGATTaGCCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: WIDATRTSELVALPD*PNQASSGSRGRDLS Trigger: ACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
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| CDS TCA 90 bp | ACAGTGGATCGACGCCACTCGGACAAGCGAGCTTGTGGCTTTACCTaGTTGACCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: TVDRRHSDKRACGFT*LTESGQFWVSRQRP Trigger: AGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS GCA 90 bp | AAGCCAAGCACCACGTCTGAGGCTTTCCCCTGCCTGTCTTTGACCTaGAGAGCAGTGATCGTGCAGCCCCATGAGATGATGTCCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: KPSTTSEAFPCLSLT*RAVIVQPHEMMSTL Trigger: GAGTGTGGACATCATCTCATGGGGCTGCACGATCACTGCTCTGCAGGTCAAAGACAGGCAGGGGAAAGCCTCAGACGTGGTGCTTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 90 bp | CCATCTGGACTGACTCGAAAGAACTGGACGCCATTGGTCAACACCTaGGGGGTCCAGAGGACCTTATCAAACCCCGTGAATCCGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSGLTRKNWTPLVNT*GVQRTLSNPVNPPW Trigger: CCATGGCGGATTCACGGGGTTTGATAAGGTCCTCTGGACCCCTCAGGTGTTGACCAATGGCGTCCAGTTCTTTCGAGTCAGTCCAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 90 bp | CTGATTGACCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTaGGTGCTTGGGATACACCGCACCGTTCTTGCCTTTCAGAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LIDRIRPVLGLEAET*VLGIHRTVLAFQST Trigger: GGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 90 bp | TTGACCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTaGTTGGGATACACCGCACCGTTCTTGCCTTTCAGAGTACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LTESGQFWVSRQRPE*LGYTAPFLPFRVPS Trigger: GGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 90 bp | CCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTGCTTaGGATACACCGCACCGTTCTTGCCTTTCAGAGTACCATCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PNQASSGSRGRDLSA*DTPHRSCLSEYHPR Trigger: TCTTGGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 90 bp | AGGCTTCATGACAGTGGATCGACGCCACTCGGACAAGCGAGCTTGTaGCTTTACCTGATTGACCGAATCAGGCCAGTTCTGGGTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLHDSGSTPLGQASL*LYLIDRIRPVLGLE Trigger: CTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTCATGAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS CCA 90 bp | TGTCACCCAGACTTTCAGCTCTCCAGGGTAGCCTTCCTCACCATCTaGACTGACTCGAAAGAACTGGACGCCATTGGTCAACACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHPDFQLSRVAFLTI*TDSKELDAIGQHLR Trigger: CCTCAGGTGTTGACCAATGGCGTCCAGTTCTTTCGAGTCAGTCCAGATGGTGAGGAAGGCTACCCTGGAGAGCTGAAAGTCTGGGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 90 bp | TTAACCATGCAGCCCCACTTGAGTGTTGTGACCTGTCAGGCTTCATaGCAGTGGATCGACGCCACTCGGACAAGCGAGCTTGTGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTMQPHLSVVTCQAS*QWIDATRTSELVAL Trigger: TAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTCATGAAGCCTGACAGGTCACAACACTCAAGTGGGGCTGCATGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTCCAAGACCCTGCTTGTCCTTCAGTGACCCTAGGAATGTTCAGGCAGATTTTCCCCTGCCTGTCTTaGACCTGCAGAGCAGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: RVQDPACPSVTLGMFRQIFPCLS*TCRAVI Trigger: GATCACTGCTCTGCAGGTCAAAGACAGGCAGGGGAA...AATCTGCCTGAACATTCCTAGGGTCACTGAAGGACAAGCAGGGTCTTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS GCA 90 bp | AGTGAATCTTCCTTTGGCAATTCGGTTGGCTACCCTCCCAACCACTaGTCCAAAGTAGGGCTGCTTCTGGAGGTAACCTTCCAATTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SESSFGNSVGYPPNH*SKVGLLLEVTFQFR Trigger: GCGGAATTGGAAGGTTACCTCCAGAAGCAGCCCTACTTTGGAGCAGTGGTTGGGAGGGTAGCCAACCGAATTGCCAAAGGAAGATTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CCA 90 bp | TACCATCCAAGAAGTTTCCTGTGTAAAACTGGACGCCTGGTTGTGTaGTATATACTTCCAGGATCCTCCCACTTGCAGCGTGACGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: YHPRSFLCKTGRLVV*YILPGSSHLQRDAP Trigger: GGGTGCGTCACGCTGCAAGTGGGAGGATCCTGGAAGTATATACCACACAACCAGGCGTCCAGTTTTACACAGGAAACTTCTTGGATGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCATCTCTAGCTCCTACGGTAAGTCTGAGAAGAAAGGCTCTGACGGAGCACATGGTCATATATATTaGGGGAGCCCTGGCCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SAISSSYGKSEKKGSDGAHGHIY*GSPGLL Trigger: TAGCAGGCCAGGGCTCCCCAAATATATATGACCATG...TGCTCCGTCAGAGCCTTTCTTCTCAGACTTACCGTAGGAGCTAGAGATGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGTGACCCTAGGAATGTTCAGGCAGATTGAGGTAGAGGCACAGAGGGAGAAACTGGACGCCTGGTaGTGTGGTATATACTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVTLGMFRQIEVEAQREKLDAW*CGIYFQ Trigger: CTGGAAGTATATACCACACAACCAGGCGTCCAGTTT...CTCCCTCTGTGCCTCTACCTCAATCTGCCTGAACATTCCTAGGGTCACTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS GCA 90 bp | TCTCGAGGCAGAGACCTGAGTGCTTGGGATACACCGCACCGTTCTTaGCTTTCAGAGTACCATCCAAGAAGTTTCCTGTGTAAAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRGRDLSAWDTPHRS*LSEYHPRSFLCKTG Trigger: TCCAGTTTTACACAGGAAACTTCTTGGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS-3UTR CAA 90 bp | CCATCTCTAGCTCCTACGGTAAGTCTGAGAAGAAAGGCTCTGACGGAGCAGGGTATAGTGAATCTTCCTTaGGCAATTCGGTTGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: PSLAPTVSLRRKALTEQGIVNLP*AIRLAT Trigger: GGTAGCCAACCGAATTGCCAAAGGAAGATTCACTAT...ACCCTGCTCCGTCAGAGCCTTTCTTCTCAGACTTACCGTAGGAGCTAGAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 90 bp | GAATCAGAGTTTCATCCACGGGCAAATATGCATCTGCTGCAATGGTaGCTTCATGGTCATATATATTTGGGGAGCCCTGGCCTGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESEFHPRANMHLLQW*LHGHIYLGSPGLLG Trigger: ACCTAGCAGGCCAGGGCTCCCCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 90 bp | ATAAGAATGGTTGGTCAGATTAACTGGAGTGGTCTGGCTGGCCTGTaGTCTGTAGTTGATTACAAGCTCCCCACCATCCAGGGTATATGT | + |
|
Preference number: 5 (lower is better) Translates to: IRMVGQINWSGLAGL*SVVDYKLPTIQGIC Trigger: ACATATACCCTGGATGGTGGGGAGCTTGTAATCAACTACAGAGCACAGGCCAGCCAGACCACTCCAGTTAATCTGACCAACCATTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS GCA 90 bp | TCCTGTTGGAATCAGAGTTTCATCCACGGGCAAATATGCATCTGCTaGAATGGTGACTTCATGGTCATATATATTTGGGGAGCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCWNQSFIHGQICIC*NGDFMVIYIWGALA Trigger: GGCCAGGGCTCCCCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTCCAACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 90 bp | TTTCAGAGTACCATCCAAGAAGTTTCCTGTGTAAAACTGGACGCCTaGTTGTGTGGTATATACTTCCAGGATCCTCCCACTTGCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FQSTIQEVSCVKLDA*LCGIYFQDPPTCSV Trigger: CACGCTGCAAGTGGGAGGATCCTGGAAGTATATACCACACAACCAGGCGTCCAGTTTTACACAGGAAACTTCTTGGATGGTACTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 90 bp | GACTCCTGTTGGAATCAGAGTTTCATCCACGGGCAAATATGCATCTaGTGCAATGGTGACTTCATGGTCATATATATTTGGGGAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSCWNQSFIHGQICI*CNGDFMVIYIWGAL Trigger: CAGGGCTCCCCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTCCAACAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 90 bp | AGCAATGACTCCTGTTGGAATCAGAGTTTCATCCACGGGCAAATATaGATCTGCTGCAATGGTGACTTCATGGTCATATATATTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNDSCWNQSFIHGQI*ICCNGDFMVIYIWG Trigger: TCCCCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTCCAACAGGAGTCATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CAA 90 bp | TCCGCAAAGCCAAGCACCACGTCTGAGGCTTTCCCCTGCCTGTCTTaGACCTGCAGAGCAGTGATCGTGCAGCCCCATGAGATGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAKPSTTSEAFPCLS*TCRAVIVQPHEMMS Trigger: GGACATCATCTCATGGGGCTGCACGATCACTGCTCTGCAGGTCAAAGACAGGCAGGGGAAAGCCTCAGACGTGGTGCTTGGCTTTGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 72 bp | CGACGCCACTCGGACAAGCGAGCTTGTGGCTTTACCTaGTTGACCGAATCAGGCCAGTTCTGGGTCTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRHSDKRACGFT*LTESGQFWVSR Trigger: CCTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS TCA 72 bp | GCCACTCGGACAAGCGAGCTTGTGGCTTTACCTGATTaGCCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ATRTSELVALPD*PNQASSGSRGR Trigger: TCTGCCTCGAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS TCA 72 bp | CAGCCCCACTTGAGTGTTGTGACCTGTCAGGCTTCATaGCAGTGGATCGACGCCACTCGGACAAGCGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPHLSVVTCQAS*QWIDATRTSEL Trigger: AAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTCATGAAGCCTGACAGGTCACAACACTCAAGTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS GCA 72 bp | TCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTaGTTGGGATACACCGCACCGTTCTTGCCTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGQFWVSRQRPE*LGYTAPFLPFR Trigger: TCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 72 bp | GCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTGCTTaGGATACACCGCACCGTTCTTGCCTTTCAGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASSGSRGRDLSA*DTPHRSCLSEY Trigger: GTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CAA 72 bp | GGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTGCTaGGGATACACCGCACCGTTCTTGCCTTTCAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GQFWVSRQRPEC*GYTAPFLPFRV Trigger: TACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CAA 90 bp | ACCGAATCAGGCCAGTTCTGGGTCTCGAGGCAGAGACCTGAGTGCTaGGGATACACCGCACCGTTCTTGCCTTTCAGAGTACCATCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TESGQFWVSRQRPEC*GYTAPFLPFRVPSK Trigger: CTTGGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTGCCTCGAGACCCAGAACTGGCCTGATTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CAA 90 bp | GTCAGGCTTCATGACAGTGGATCGACGCCACTCGGACAAGCGAGCTaGTGGCTTTACCTGATTGACCGAATCAGGCCAGTTCTGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VRLHDSGSTPLGQAS*WLYLIDRIRPVLGL Trigger: GAGACCCAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTCATGAAGCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS CCA 72 bp | GTCCAGAGGACCTTATCAAACCCCGTGAATCCGCCATaGAGACTGTTGGGCTCTCTGTTAACTGGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VQRTLSNPVNPP*RLLGSLLTGRW Trigger: CCACCTGCCAGTTAACAGAGAGCCCAACAGTCTCCATGGCGGATTCACGGGGTTTGATAAGGTCCTCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CCA 72 bp | GACAGTGGATCGACGCCACTCGGACAAGCGAGCTTGTaGCTTTACCTGATTGACCGAATCAGGCCAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSGSTPLGQASL*LYLIDRIRPVL Trigger: CAGAACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS TCA 72 bp | TCAGCTCTCCAGGGTAGCCTTCCTCACCATCTGGACTaGCTCGAAAGAACTGGACGCCATTGGTCAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: SALQGSLPHHLD*LERTGRHWSTP Trigger: AGGTGTTGACCAATGGCGTCCAGTTCTTTCGAGTCAGTCCAGATGGTGAGGAAGGCTACCCTGGAGAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS GCA 72 bp | TCCTTTGGCAATTCGGTTGGCTACCCTCCCAACCACTaGTCCAAAGTAGGGCTGCTTCTGGAGGTAACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFGNSVGYPPNH*SKVGLLLEVTF Trigger: GAAGGTTACCTCCAGAAGCAGCCCTACTTTGGAGCAGTGGTTGGGAGGGTAGCCAACCGAATTGCCAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CCA 72 bp | ATCGTGCAGCCCCATGAGATGATGTCCACACTCAGCTaGTCTGACCGAAGCTGGAATTTCTCCACTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IVQPHEMMSTLS*SDRSWNFSTVP Trigger: AGGGACAGTGGAGAAATTCCAGCTTCGGTCAGACCAGCTGAGTGTGGACATCATCTCATGGGGCTGCACGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CAA 72 bp | CATGACAGTGGATCGACGCCACTCGGACAAGCGAGCTaGTGGCTTTACCTGATTGACCGAATCAGGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HDSGSTPLGQAS*WLYLIDRIRPV Trigger: AACTGGCCTGATTCGGTCAATCAGGTAAAGCCACAAGCTCGCTTGTCCGAGTGGCGTCGATCCACTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133955.2 |
||
| CDS CAA 90 bp | GTCCAGAGGACCTTATCAAACCCCGTGAATCCGCCATGGAGACTGTaGGGCTCTCTGTTAACTGGCAGGTGGTACTCCTTCCCACCTATA | + |
|
Preference number: 6 (lower is better) Translates to: VQRTLSNPVNPPWRL*GSLLTGRWYSFPPI Trigger: TATAGGTGGGAAGGAGTACCACCTGCCAGTTAACAGAGAGCCCAACAGTCTCCATGGCGGATTCACGGGGTTTGATAAGGTCCTCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS TCA 72 bp | CTGACTCGAAAGAACTGGACGCCATTGGTCAACACCTaGGGGGTCCAGAGGACCTTATCAAACCCCGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LTRKNWTPLVNT*GVQRTLSNPVN Trigger: ATTCACGGGGTTTGATAAGGTCCTCTGGACCCCTCAGGTGTTGACCAATGGCGTCCAGTTCTTTCGAGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS GCA 72 bp | GTTGGTCAGATTAACTGGAGTGGTCTGGCTGGCCTGTaGTCTGTAGTTGATTACAAGCTCCCCACCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGQINWSGLAGL*SVVDYKLPTIQ Trigger: CTGGATGGTGGGGAGCTTGTAATCAACTACAGAGCACAGGCCAGCCAGACCACTCCAGTTAATCTGACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CCA 72 bp | GACTTTCAGCTCTCCAGGGTAGCCTTCCTCACCATCTaGACTGACTCGAAAGAACTGGACGCCATTGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: DFQLSRVAFLTI*TDSKELDAIGQ Trigger: TTGACCAATGGCGTCCAGTTCTTTCGAGTCAGTCCAGATGGTGAGGAAGGCTACCCTGGAGAGCTGAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CAA 72 bp | ACCTTATCAAACCCCGTGAATCCGCCATGGAGACTGTaGGGCTCTCTGTTAACTGGCAGGTGGTACTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLSNPVNPPWRL*GSLLTGRWYSF Trigger: GAAGGAGTACCACCTGCCAGTTAACAGAGAGCCCAACAGTCTCCATGGCGGATTCACGGGGTTTGATAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039205.11 |
||
| CDS CAA 72 bp | CAGAGACCTGAGTGCTTGGGATACACCGCACCGTTCTaGCCTTTCAGAGTACCATCCAAGAAGTTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRPECLGYTAPF*PFRVPSKKFPV Trigger: CACAGGAAACTTCTTGGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CAA 90 bp | CAGAGTACCATCCAAGAAGTTTCCTGTGTAAAACTGGACGCCTGGTaGTGTGGTATATACTTCCAGGATCCTCCCACTTGCAGCGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: QSTIQEVSCVKLDAW*CGIYFQDPPTCSVT Trigger: CGTCACGCTGCAAGTGGGAGGATCCTGGAAGTATATACCACACAACCAGGCGTCCAGTTTTACACAGGAAACTTCTTGGATGGTACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 72 bp | AGAGACCTGAGTGCTTGGGATACACCGCACCGTTCTTaGCTTTCAGAGTACCATCCAAGAAGTTTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RDLSAWDTPHRS*LSEYHPRSFLC Trigger: ACACAGGAAACTTCTTGGATGGTACTCTGAAAGGCAAGAACGGTGCGGTGTATCCCAAGCACTCAGGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 72 bp | CACTGGCTTTCTCAGGTCGAAGGCAGTTCCTTCCACTaGAGCAATGACTCCTGTTGGAATCAGAGTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HWLSQVEGSSFH*SNDSCWNQSFI Trigger: GATGAAACTCTGATTCCAACAGGAGTCATTGCTCCAGTGGAAGGAACTGCCTTCGACCTGAGAAAGCCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS GCA 72 bp | TGGTTGTGTGGTATATACTTCCAGGATCCTCCCACTTaGAGCGTGACGCACCCTTGCACAAAACTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WLCGIYFQDPPT*SVTHPCTKLLF Trigger: GAAAAGAAGTTTTGTGCAAGGGTGCGTCACGCTGCAAGTGGGAGGATCCTGGAAGTATATACCACACAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
||
| CDS CCA 72 bp | GAAGGCAGTTCCTTCCACTGGAGCAATGACTCCTGTTaGAATCAGAGTTTCATCCACGGGCAAATATGCATC | + |
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Preference number: 6 (lower is better) Translates to: EGSSFHWSNDSC*NQSFIHGQICI Trigger: GATGCATATTTGCCCGTGGATGAAACTCTGATTCCAACAGGAGTCATTGCTCCAGTGGAAGGAACTGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
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| CDS CAA 90 bp | TCCCACTTGCAGCGTGACGCACCCTTGCACAAAACTTCTTTTCTTTaGACTCCTTCAGACAGAAATTATGGTCGAAACCATGGATGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SHLQRDAPLHKTSFL*TPSDRNYGRNHGCG Trigger: ACCACATCCATGGTTTCGACCATAATTTCTGTCTGAAGGAGTCAAAAGAAAAGAAGTTTTGTGCAAGGGTGCGTCACGCTGCAAGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
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| CDS GCA 72 bp | TCCTGTTGGAATCAGAGTTTCATCCACGGGCAAATATaGATCTGCTGCAATGGTGACTTCATGGTCATATAT | + |
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Preference number: 6 (lower is better) Translates to: SCWNQSFIHGQI*ICCNGDFMVIY Trigger: ATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTCCAACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
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| CDS GCA 72 bp | AATCAGAGTTTCATCCACGGGCAAATATGCATCTGCTaGAATGGTGACTTCATGGTCATATATATTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: NQSFIHGQICIC*NGDFMVIYIWG Trigger: TCCCCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
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| CDS GCA 72 bp | TGGAATCAGAGTTTCATCCACGGGCAAATATGCATCTaGTGCAATGGTGACTTCATGGTCATATATATTTGG | + |
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Preference number: 6 (lower is better) Translates to: WNQSFIHGQICI*CNGDFMVIYIW Trigger: CCAAATATATATGACCATGAAGTCACCATTGCAGCAGATGCATATTTGCCCGTGGATGAAACTCTGATTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039205.11 ENSMUST00000133955.2 |
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