Pregenerated sensors for GALE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028671Ensembl transcript IDs: ENSMUST00000102540.2, ENSMUST00000102541.10, ENSMUST00000143304.2, ENSMUST00000149636.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTGCCTGGAGGGCTGAGCAGACAGCTGGCATTTGAGGTAGGGTaGCCCCAGAGTGTGAGGGTACAGGGTCCTGTGGAGACTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLPGGLSRQLAFEVG*PQSVRVQGPVETGK Trigger: CTTTCCAGTCTCCACAGGACCCTGTACCCTCACACTCTGGGGCCACCCTACCTCAAATGCCAGCTGTCTGCTCAGCCCTCCAGGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR CCA 90 bp | GGTAGGGTGGCCCCAGAGTGTGAGGGTACAGGGTCCTGTGGAGACTaGAAAGCAGGCAGCTGCTCTTTTCTGGTCCATGGTAACGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: GRVAPECEGTGSCGD*KAGSCSFLVHGNEV Trigger: GACCTCGTTACCATGGACCAGAAAAGAGCAGCTGCCTGCTTTCCAGTCTCCACAGGACCCTGTACCCTCACACTCTGGGGCCACCCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGGGGTCCTGTGGAGACTaGAAAGCAGGCAGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQGSCGD*KAGSCS Trigger: AGAGCAGCTGCCTGCTTTCCAGTCTCCACAGGACCC...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGGGGTACAGGGTCCTGTaGAGACTGGAAAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQGYRVL*RLESRQ Trigger: CTGCCTGCTTTCCAGTCTCCACAGGACCCTGTACCC...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGGCATTTGAGGTAGGGTaGCCCCAGAGTGTGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQAFEVG*PQSVRV Trigger: TACCCTCACACTCTGGGGCCACCCTACCTCAAATGC...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCGGGTCCTGTGGAGACTaGAAAGCAGGCAGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GRQAGKTWTSFWSVEPEVGSCGD*KAGSCS Trigger: AGAGCAGCTGCCTGCTTTCCAGTCTCCACAGGACCC...GACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGGCAGCTGCTCTTTTCTaGTCCATGGTAACGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQAAALF*SMVTRS Trigger: GGACCTCGTTACCATGGACCAGAAAAGAGCAGCTGC...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGTCCTGCCTGGAGGGCTaGGCAGACAGCTGGCATTTG | + |
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Preference number: 2 (lower is better) Translates to: LNTLESLIISAWGRLWSQSCLEG*ADSWHL Trigger: CAAATGCCAGCTGTCTGCTCAGCCCTCCAGGCAGGA...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGGCATTTGAGGTAGGGTaGCCCCAGAGTGTGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LNTLESLIISAWGRLWSQAFEVG*PQSVRV Trigger: TACCCTCACACTCTGGGGCCACCCTACCTCAAATGC...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGGCAGCTGCTCTTTTCTaGTCCATGGTAACGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LNTLESLIISAWGRLWSQAAALF*SMVTRS Trigger: GGACCTCGTTACCATGGACCAGAAAAGAGCAGCTGC...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR TCA 72 bp | TCTCCTGCCTGGAGGGCTGAGCAGACAGCTGGCATTTaGGGTAGGGTGGCCCCAGAGTGTGAGGGTACAGGG | + |
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Preference number: 3 (lower is better) Translates to: SPAWRAEQTAGI*GRVAPECEGTG Trigger: CCCTGTACCCTCACACTCTGGGGCCACCCTACCTCAAATGCCAGCTGTCTGCTCAGCCCTCCAGGCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR CCA 72 bp | GGAGGGCTGAGCAGACAGCTGGCATTTGAGGTAGGGTaGCCCCAGAGTGTGAGGGTACAGGGTCCTGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GGLSRQLAFEVG*PQSVRVQGPVE Trigger: CTCCACAGGACCCTGTACCCTCACACTCTGGGGCCACCCTACCTCAAATGCCAGCTGTCTGCTCAGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| 3UTR CCA 72 bp | GACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTaGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DRLERPGLLSGQ*NQRSPAWRAEQ Trigger: CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGTAGCCTGTGCCCGTaGCCAGGTTGTAGGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQSSLCP*PGCRSG Trigger: GCCGGACCTACAACCTGGGCACGGGCACAGGCTACT...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GGGGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGCGGCCTGTCAACTCCTaGACCCGGCGCAGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GGDRLERPGLLSGQWNQRRPVNS*TRRRLS Trigger: TGAGAGCCTGCGCCGGGTCCAGGAGTTGACAGGCCG...CCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGCCCGTACACGGTGGCTaGGCTGCTGAACACCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQPVHGG*AAEHQV Trigger: AACCTGGTGTTCAGCAGCTCAGCCACCGTGTACGGG...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGGGCCAGGCTGGGGTTaGCATAACAGGCCGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRGPGWG*HNRPPH Trigger: ATGTGGCGGCCTGTTATGCCAACCCCAGCCTGGCCC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACCCGTACACGGTGGCTaGGCTGCTGAACACCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRPVHGG*AAEHQV Trigger: AACCTGGTGTTCAGCAGCTCAGCCACCGTGTACGGG...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACCAATACCGTGTGGCTaGCGATGTAGCCAGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRPIPCG*RCSQPH Trigger: GTGGGGCTGGCTACATCGGCAGCCACACGGTATTGG...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCAGTAGCCTGTGCCCGTaGCCAGGTTGTAGGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPASSLCP*PGCRSG Trigger: GCCGGACCTACAACCTGGGCACGGGCACAGGCTACT...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGGACAGAGTAGCCTGTaGCCGTGCCCAGGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRGQSSL*PCPGCR Trigger: CCTACAACCTGGGCACGGGCACAGGCTACTCTGTCC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGGGACAGAGTAGCCTGTaGCCGTGCCCAGGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQGQSSL*PCPGCR Trigger: CCTACAACCTGGGCACGGGCACAGGCTACTCTGTCC...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAAGCCCGAAGGGTTCTaGTTCTGCCAGCGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQKPEGF*FCQRHR Trigger: TCTGTGGCGCTGGCAGAAGCAGAACCCTTCGGGCTT...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGATCCAGAGGCAGGTACTaGGGGTTCCCGTACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRSRGRY*GFPYTV Trigger: CACCGTGTACGGGAACCCCCAGTACCTGCCTCTGGA...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCGGGCCAGGCTGGGGTTaGCATAACAGGCCGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPAGPGWG*HNRPPH Trigger: ATGTGGCGGCCTGTTATGCCAACCCCAGCCTGGCCC...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCCTCATGGGCCAGGCTaGGGTTGGCATAACAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPAPHGPG*GWHNRP Trigger: CGGCCTGTTATGCCAACCCCAGCCTGGCCCATGAGG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGCTCCGTGGGCCCTCATaGTCTCTAGAAGCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQLRGPS*SLEAGW Trigger: CCATCCAGCTTCTAGAGATCATGAGGGCCCACGGAG...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGCGGGATCTTCTTCCCTaGGGCTTTCTCCATGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQRDLLP*GFLHGL Trigger: CAAGCCATGGAGAAAGCCTCAGGGAAGAAGATCCCG...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCCAATACCGTGTGGCTaGCGATGTAGCCAGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPAPIPCG*RCSQPH Trigger: GTGGGGCTGGCTACATCGGCAGCCACACGGTATTGG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGATCACCTTCCCGCCGTaGCACCACCTTGTACGGGAT | + |
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Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQITFPP*HHLVRD Trigger: ATCCCGTACAAGGTGGTGGCACGGCGGGAAGGTGAT...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR GCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAAAGCCCGAAGGGTTCTaGTTCTGCCAGCGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRKPEGF*FCQRHR Trigger: TCTGTGGCGCTGGCAGAAGCAGAACCCTTCGGGCTT...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCAGAGGCAGGTACTaGGGGTTCCCGTACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: GRQAGKTWTSFWSVEPEVSRGRY*GFPYTV Trigger: CACCGTGTACGGGAACCCCCAGTACCTGCCTCTGGA...GACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCTCCGTGGGCCCTCATaGTCTCTAGAAGCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPALRGPS*SLEAGW Trigger: CCATCCAGCTTCTAGAGATCATGAGGGCCCACGGAG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | GGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCCGGTGGCTGAGCTGCTaGACACCAGGTTCTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: GRQAGKTWTSFWSVEPEVRWLSC*TPGSSL Trigger: GAGTGAAGAACCTGGTGTTCAGCAGCTCAGCCACCG...GACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGATGCTGTAGGGCTGCCTaGTCCAAGATGTCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRCCRAA*SKMSIS Trigger: GGAGATGGACATCTTGGACCAGGCAGCCCTACAGCA...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GGGGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTTCAAGGCTGCTATATaGCCCTTCGCCAGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GGDRLERPGLLSGQWNQRFKAAI*PFARST Trigger: GGTGGACCTGGCGAAGGGCCATATAGCAGCCTTGAA...CCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGTTCAAGGCTGCTATATaGCCCTTCGCCAGGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQFKAAI*PFARST Trigger: GGTGGACCTGGCGAAGGGCCATATAGCAGCCTTGAA...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCGGGATCTTCTTCCCTaGGGCTTTCTCCATGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPARDLLP*GFLHGL Trigger: CAAGCCATGGAGAAAGCCTCAGGGAAGAAGATCCCG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGTTGAGGCCAGCAAAGTaGATGACGGCCTTAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQLRPAK*MTALKL Trigger: CAGCTTTAAGGCCGTCATCCACTTTGCTGGCCTCAA...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GGGGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGGCTTTCTCCATGGCTTaGACCATCTGCAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: GGDRLERPGLLSGQWNQRAFSMA*TICRTE Trigger: CTCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGC...CCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGCTTTCTCCATGGCTTaGACCATCTGCAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRAFSMA*TICRTE Trigger: CTCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGGGATCATCTCCTCGATaGAGAACTTGGACTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQGSSPR*RTWTCR Trigger: ACGGCAAGTCCAAGTTCTTCATCGAGGAGATGATCC...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR TCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGGATCATCTCCTCGATaGAGAACTTGGACTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRGSSPR*RTWTCR Trigger: ACGGCAAGTCCAAGTTCTTCATCGAGGAGATGATCC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGTTGAGGCCAGCAAAGTaGATGACGGCCTTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQLRPAK*MTALKL Trigger: CAGCTTTAAGGCCGTCATCCACTTTGCTGGCCTCAA...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGAGGTTCTTCACTCCGTaGGCCCTCATGATCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQRFFTP*ALMISR Trigger: TCTAGAGATCATGAGGGCCCACGGAGTGAAGAACCT...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAAGGTTCTTCACTCCGTaGGCCCTCATGATCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRRFFTP*ALMISR Trigger: TCTAGAGATCATGAGGGCCCACGGAGTGAAGAACCT...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCTGAGGCTTTCTCCATaGCTTGGACCATCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLERPGLLSGQWNQRSPALRLSP*LGPSAG Trigger: TCCTGCAGATGGTCCAAGCCATGGAGAAAGCCTCAG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGTATGGAAGTTGTCAATaGCCACAGGTGAGTAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQYGSCQ*PQVSSL Trigger: CAGGCTACTCACCTGTGGTCATTGACAACTTCCATA...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGCCTCATGGGCCAGGCTaGGGTTGGCATAACAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNTLESLIISAWGRLWSQPHGPG*GWHNRP Trigger: CGGCCTGTTATGCCAACCCCAGCCTGGCCCATGAGG...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR TCA 90 bp | GGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTATGGAAGTTGTCAATaGCCACAGGTGAGTAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRQAGKTWTSFWSVEPEVYGSCQ*PQVSSL Trigger: CAGGCTACTCACCTGTGGTCATTGACAACTTCCATA...GACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGACGGCCTTAAAGCTGTaGTTCTTAAAGAGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQTALKL*FLKRCC Trigger: ACAGCACCTCTTTAAGAAGCACAGCTTTAAGGCCGT...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR GCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGATCACCTTCCCGCCGTaGCACCACCTTGTACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTLESLIISAWGRLWSQITFPP*HHLVRD Trigger: ATCCCGTACAAGGTGGTGGCACGGCGGGAAGGTGAT...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGTGCTGTAGGGCTGCCTaGTCCAAGATGTCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTLESLIISAWGRLWSQCCRAA*SKMSIS Trigger: GGAGATGGACATCTTGGACCAGGCAGCCCTACAGCA...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGATGATCTCTAGAAGCTaGATGGTCCCTGTTAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQMISRS*MVPVKL Trigger: TAACTTAACAGGGACCATCCAGCTTCTAGAGATCAT...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CCA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAATGATCTCTAGAAGCTaGATGGTCCCTGTTAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRMISRS*MVPVKL Trigger: TAACTTAACAGGGACCATCCAGCTTCTAGAGATCAT...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 90 bp | CCAGCCCCAGGGCTGCTGTCCAGCCCAGCTCCTCATGGGCCAGGCTaGGGTTGGCATAACAGGCCGCCACATCACCTTCCCGCCGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPGLLSSPAPHGPG*GWHNRPPHHLPAVP Trigger: TGGCACGGCGGGAAGGTGATGTGGCGGCCTGTTATGCCAACCCCAGCCTGGCCCATGAGGAGCTGGGCTGGACAGCAGCCCTGGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS TCA 90 bp | GGCCTCATCCAGAGGCAGGTACTGGGGGTTCCCGTACACGGTGGCTaGGCTGCTGAACACCAGGTTCTTCACTCCGTGGGCCCTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLIQRQVLGVPVHGG*AAEHQVLHSVGPHD Trigger: ATCATGAGGGCCCACGGAGTGAAGAACCTGGTGTTCAGCAGCTCAGCCACCGTGTACGGGAACCCCCAGTACCTGCCTCTGGATGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGCCTCTCGTCGCCCGATaGCCACCTGGGAGACGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQPLVAR*PPGRRR Trigger: CCTACGTCTCCCAGGTGGCAATCGGGCGACGAGAGG...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 90 bp | GTGCCACCACCTTGTACGGGATCTTCTTCCCTGAGGCTTTCTCCATaGCTTGGACCATCTGCAGGACAGAGTAGCCTGTGCCCGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPPPCTGSSSLRLSP*LGPSAGQSSLCPCP Trigger: TGGGCACGGGCACAGGCTACTCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGCCTCAGGGAAGAAGATCCCGTACAAGGTGGTGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGACTCGCCCACAGCCTaGAGGCCAGCAAAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRDSPTA*RPAKWM Trigger: CATCCACTTTGCTGGCCTCAAGGCTGTGGGCGAGTC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGGACTCGCCCACAGCCTaGAGGCCAGCAAAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQDSPTA*RPAKWM Trigger: CATCCACTTTGCTGGCCTCAAGGCTGTGGGCGAGTC...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGCGCCGTGCCACCACCTaGTACGGGATCTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGDRLERPGLLSGQWNQRRRATT*YGIFFP Trigger: AGGGAAGAAGATCCCGTACAAGGTGGTGGCACGGCG...CCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 90 bp | TATGGGATTGAAGTACCGAAGCAGCACGGCGTTCCAGGCCGTGTCTaGCCGGCACAGGTCCCGGATCATCTCCTCGATGAAGAACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YGIEVPKQHGVPGRV*PAQVPDHLLDEELG Trigger: TCCAAGTTCTTCATCGAGGAGATGATCCGGGACCTGTGCCGGGCAGACACGGCCTGGAACGCCGTGCTGCTTCGGTACTTCAATCCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 90 bp | TCTCCATGGCTTGGACCATCTGCAGGACAGAGTAGCCTGTGCCCGTaGCCAGGTTGTAGGTCCGGCAACCACATTGCTCCTTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPWLGPSAGQSSLCP*PGCRSGNHIAPSAS Trigger: AGAAGCTGAAGGAGCAATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACAGGCTACTCTGTCCTGCAGATGGTCCAAGCCATGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 90 bp | AGGCTTTCTCCATGGCTTGGACCATCTGCAGGACAGAGTAGCCTGTaGCCGTGCCCAGGTTGTAGGTCCGGCAACCACATTGCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSPWLGPSAGQSSL*PCPGCRSGNHIAPS Trigger: TGAAGGAGCAATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACAGGCTACTCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 90 bp | AAGATGTCCATCTCCTCAAACTCCACAGAGCGGCCTGTCAACTCCTaGACCCGGCGCAGGCTCTCAGGCATGGAGTCTTCTCCACGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KMSISSNSTERPVNS*TRRRLSGMESSPRM Trigger: CATTCGTGGAGAAGACTCCATGCCTGAGAGCCTGCGCCGGGTCCAGGAGTTGACAGGCCGCTCTGTGGAGTTTGAGGAGATGGACATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGGGCTTTCTCCATGGCTaGGACCATCTGCAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLLSGQWNQRSPAWRAEQGFLHG*DHLQDR Trigger: TCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGCC...CTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCCGCCGTGCCACCACCTaGTACGGGATCTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLERPGLLSGQWNQRSPARRATT*YGIFFP Trigger: AGGGAAGAAGATCCCGTACAAGGTGGTGGCACGGCG...GGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGGCTTTCTCCATGGCTaGGACCATCTGCAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRGFLHG*DHLQDR Trigger: TCTGTCCTGCAGATGGTCCAAGCCATGGAGAAAGCC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GACTTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGAGGTCCGGCAACCACATaGCTCCTTCAGCTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DFFLVSGTRGLLPGGLSRGPATT*LLQLLQ Trigger: TTGAAGAAGCTGAAGGAGCAATGTGGTTGCCGGACC...TCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | GGGGGAGACAGGCTGGAAAGACCTGGACTTCTTTCTGGTCAGTGGAACCAGAGGGGTCCGGCAACCACATaGCTCCTTCAGCTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGDRLERPGLLSGQWNQRGPATT*LLQLLQ Trigger: TTGAAGAAGCTGAAGGAGCAATGTGGTTGCCGGACC...CCTCTGGTTCCACTGACCAGAAAGAAGTCCAGGTCTTTCCAGCCTGTCTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS TCA 90 bp | GTCTTCTCCACGAATGGCGTTATGGAAGTTGTCAATGACCACAGGTaGGTAGCCTGCCTCCAGCAGCTCCAATACCGTGTGGCTGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VFSTNGVMEVVNDHR*VACLQQLQYRVAAD Trigger: ATCGGCAGCCACACGGTATTGGAGCTGCTGGAGGCAGGCTACTCACCTGTGGTCATTGACAACTTCCATAACGCCATTCGTGGAGAAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 ENSMUST00000143304.2 ENSMUST00000149636.2 |
||
| CDS CCA 90 bp | ACGGCCTTAAAGCTGTGCTTCTTAAAGAGGTGCTGTAGGGCTGCCTaGTCCAAGATGTCCATCTCCTCAAACTCCACAGAGCGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TALKLCFLKRCCRAA*SKMSISSNSTERPV Trigger: GACAGGCCGCTCTGTGGAGTTTGAGGAGATGGACATCTTGGACCAGGCAGCCCTACAGCACCTCTTTAAGAAGCACAGCTTTAAGGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 90 bp | AGAGGCTTCTGCACTGACTCGCCCACAGCCTTGAGGCCAGCAAAGTaGATGACGGCCTTAAAGCTGTGCTTCTTAAAGAGGTGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGFCTDSPTALRPAK*MTALKLCFLKRCCR Trigger: CCTACAGCACCTCTTTAAGAAGCACAGCTTTAAGGCCGTCATCCACTTTGCTGGCCTCAAGGCTGTGGGCGAGTCAGTGCAGAAGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCTGGTCAGTGGAACCAGAGGTCTCCTGCCTGGAGGGCTGAGCAGACAGATGGCGTTATGGAAGTaGTCAATGACCACAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FFLVSGTRGLLPGGLSRQMALWK*SMTTGE Trigger: CTCACCTGTGGTCATTGACAACTTCCATAACGCCAT...CTGTCTGCTCAGCCCTCCAGGCAGGAGACCTCTGGTTCCACTGACCAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS-3UTR CAA 90 bp | TTAAATACTTTGGAAAGCTTAATCATCAGTGCCTGGGGGAGGCTATGGTCCCAGATGGCGTTATGGAAGTaGTCAATGACCACAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNTLESLIISAWGRLWSQMALWK*SMTTGE Trigger: CTCACCTGTGGTCATTGACAACTTCCATAACGCCAT...CTGGGACCATAGCCTCCCCCAGGCACTGATGATTAAGCTTTCCAAAGTATTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 72 bp | CTGTCCAGCCCAGCTCCTCATGGGCCAGGCTGGGGTTaGCATAACAGGCCGCCACATCACCTTCCCGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSPAPHGPGWG*HNRPPHHLPAV Trigger: CACGGCGGGAAGGTGATGTGGCGGCCTGTTATGCCAACCCCAGCCTGGCCCATGAGGAGCTGGGCTGGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS TCA 72 bp | CAGAGGCAGGTACTGGGGGTTCCCGTACACGGTGGCTaGGCTGCTGAACACCAGGTTCTTCACTCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRQVLGVPVHGG*AAEHQVLHSVG Trigger: GCCCACGGAGTGAAGAACCTGGTGTTCAGCAGCTCAGCCACCGTGTACGGGAACCCCCAGTACCTGCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 72 bp | GAAGTACCGAAGCAGCACGGCGTTCCAGGCCGTGTCTaGCCGGCACAGGTCCCGGATCATCTCCTCGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: EVPKQHGVPGRV*PAQVPDHLLDE Trigger: TTCATCGAGGAGATGATCCGGGACCTGTGCCGGGCAGACACGGCCTGGAACGCCGTGCTGCTTCGGTACTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CAA 72 bp | CAGGCCGCCACATCACCTTCCCGCCGTGCCACCACCTaGTACGGGATCTTCTTCCCTGAGGCTTTCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAATSPSRRATT*YGIFFPEAFSM Trigger: CATGGAGAAAGCCTCAGGGAAGAAGATCCCGTACAAGGTGGTGGCACGGCGGGAAGGTGATGTGGCGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 72 bp | CTTGGACCATCTGCAGGACAGAGTAGCCTGTGCCCGTaGCCAGGTTGTAGGTCCGGCAACCACATTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPSAGQSSLCP*PGCRSGNHIAP Trigger: AGGAGCAATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACAGGCTACTCTGTCCTGCAGATGGTCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS GCA 72 bp | CCATGGCTTGGACCATCTGCAGGACAGAGTAGCCTGTaGCCGTGCCCAGGTTGTAGGTCCGGCAACCACATT | + |
|
Preference number: 6 (lower is better) Translates to: PWLGPSAGQSSL*PCPGCRSGNHI Trigger: AATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACAGGCTACTCTGTCCTGCAGATGGTCCAAGCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CAA 90 bp | AGAGTAGCCTGTGCCCGTGCCCAGGTTGTAGGTCCGGCAACCACATaGCTCCTTCAGCTTCTTCAAGGCTGCTATATGGCCCTTCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVACARAQVVGPATT*LLQLLQGCYMALRQ Trigger: CTGGCGAAGGGCCATATAGCAGCCTTGAAGAAGCTGAAGGAGCAATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACAGGCTACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS TCA 72 bp | TGTCTGCCCGGCACAGGTCCCGGATCATCTCCTCGATaGAGAACTTGGACTTGCCGTAGGGGTTGGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLPGTGPGSSPR*RTWTCRRGWYS Trigger: GCTGTACCAACCCCTACGGCAAGTCCAAGTTCTTCATCGAGGAGATGATCCGGGACCTGTGCCGGGCAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS TCA 72 bp | CTCGTCGCCCGATTGCCACCTGGGAGACGTAGGGCATaGGGTTGTTGGGAATACCCTGAGGATCTTCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: LVARLPPGRRRA*GCWEYPEDLHR Trigger: TCGGTGAAGATCCTCAGGGTATTCCCAACAACCTCATGCCCTACGTCTCCCAGGTGGCAATCGGGCGACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
||
| CDS CCA 72 bp | CTGTCAACTCCTGGACCCGGCGCAGGCTCTCAGGCATaGAGTCTTCTCCACGAATGGCGTTATGGAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSTPGPGAGSQA*SLLHEWRYGSC Trigger: ACAACTTCCATAACGCCATTCGTGGAGAAGACTCCATGCCTGAGAGCCTGCGCCGGGTCCAGGAGTTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 ENSMUST00000143304.2 ENSMUST00000149636.2 |
||
| CDS CCA 72 bp | GTGGCTGAGCTGCTGAACACCAGGTTCTTCACTCCGTaGGCCCTCATGATCTCTAGAAGCTGGATGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VAELLNTRFFTP*ALMISRSWMVP Trigger: AGGGACCATCCAGCTTCTAGAGATCATGAGGGCCCACGGAGTGAAGAACCTGGTGTTCAGCAGCTCAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS CAA 72 bp | TGTGCCCGTGCCCAGGTTGTAGGTCCGGCAACCACATaGCTCCTTCAGCTTCTTCAAGGCTGCTATATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CARAQVVGPATT*LLQLLQGCYMA Trigger: GGCCATATAGCAGCCTTGAAGAAGCTGAAGGAGCAATGTGGTTGCCGGACCTACAACCTGGGCACGGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS GCA 72 bp | CCGGCAACCACATTGCTCCTTCAGCTTCTTCAAGGCTaGTATATGGCCCTTCGCCAGGTCCACCACGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PATTLLLQLLQG*YMALRQVHHVN Trigger: ATTCACGTGGTGGACCTGGCGAAGGGCCATATAGCAGCCTTGAAGAAGCTGAAGGAGCAATGTGGTTGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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| CDS TCA 72 bp | ACGAATGGCGTTATGGAAGTTGTCAATGACCACAGGTaGGTAGCCTGCCTCCAGCAGCTCCAATACCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TNGVMEVVNDHR*VACLQQLQYRV Trigger: CACACGGTATTGGAGCTGCTGGAGGCAGGCTACTCACCTGTGGTCATTGACAACTTCCATAACGCCATTCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 ENSMUST00000143304.2 ENSMUST00000149636.2 |
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| CDS GCA 72 bp | TGGATGACGGCCTTAAAGCTGTGCTTCTTAAAGAGGTaGTGTAGGGCTGCCTGGTCCAAGATGTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: WMTALKLCFLKR*CRAAWSKMSIS Trigger: GGAGATGGACATCTTGGACCAGGCAGCCCTACAGCACCTCTTTAAGAAGCACAGCTTTAAGGCCGTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102540.2 ENSMUST00000102541.10 |
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