Pregenerated sensors for GALC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021003Ensembl transcript IDs: ENSMUST00000021390.9, ENSMUST00000221063.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCTGCAAGGGCAGAACCCGCCCAAGCACCCCTGAAGGATGGGACTaGACAACCGTGGGCCTTGAGAGCTACCACAGAGAGTGTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GCKGRTRPSTPEGWD*TTVGLESYHRECQR Trigger: TCTTTGACACTCTCTGTGGTAGCTCTCAAGGCCCACGGTTGTTCAGTCCCATCCTTCAGGGGTGCTTGGGCGGGTTCTGCCCTTGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 90 bp | CTTGGTTTCAAGTTTTCGGAAGTAATACAGACCTCACTGTACTTCTaGCTCGCTGGAGCACTACCAATTCCCATGGAGCAGCGTTATGTC | + |
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Preference number: 1 (lower is better) Translates to: LGFKFSEVIQTSLYF*LAGALPIPMEQRYV Trigger: GACATAACGCTGCTCCATGGGAATTGGTAGTGCTCCAGCGAGGCAGAAGTACAGTGAGGTCTGTATTACTTCCGAAAACTTGAAACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 90 bp | GTGAGCGGAATGGATTGCACAGGTATAGCAGAGAACTTTCTGGAGTaGTGCAAATATTCAGTAGCTTCATTGGAGTGTGGGTTACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: VSGMDCTGIAENFLE*CKYSVASLECGLQG Trigger: TCCCTGTAACCCACACTCCAATGAAGCTACTGAATATTTGCATCACTCCAGAAAGTTCTCTGCTATACCTGTGCAATCCATTCCGCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CCA 90 bp | ACAGCGCATCCTGTCACTTCCATGCTTTCAAAACAAACAATATTTTaGCAACAGAGACATCACTGTTGCTTGAAATTAGGAGTGAGCGGA | + |
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Preference number: 1 (lower is better) Translates to: TAHPVTSMLSKQTIF*QQRHHCCLKLGVSG Trigger: TCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTGTTTTGAAAGCATGGAAGTGACAGGATGCGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 90 bp | ATGCTTTCAAAACAAACAATATTTTGGCAACAGAGACATCACTGTTaGTTGAAATTAGGAGTGAGCGGAATGGATTGCACAGGTATAGCA | + |
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Preference number: 1 (lower is better) Translates to: MLSKQTIFWQQRHHC*LKLGVSGMDCTGIA Trigger: TGCTATACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTGTTTTGAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR-3UTR TCA 90 bp | ACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGACGGTTCAGAGCCCCTTGTaGGGACTCACTGCAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TTLAKPYTLDKSYSIPLTVQSPL*GLTAKG Trigger: GCCTTTTGCAGTGAGTCCTCACAAGGGGCTCTGAAC...CGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR-3UTR CCA 90 bp | CATCCCGCTGACGGAAAACACACATCCAGAAGAGTCCACAGCGCATCCTGTCACACCCACATGGAGAACTaGTCTGTTTCTAAGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: HPADGKHTSRRVHSASCHTHMEN*SVSKSY Trigger: GTAACTCTTAGAAACAGACCAGTTCTCCATGTGGGT...GTGACAGGATGCGCTGTGGACTCTTCTGGATGTGTGTTTTCCGTCAGCGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR-3UTR TCA 90 bp | GTGATGCAAATATTCAGTAGCTTCATTGGAGTGTGGGTTACAGGGAATGTTTACCCTCCTGCCACACATTaGCAGATGAAGGCATTCACC | + |
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Preference number: 2 (lower is better) Translates to: VMQIFSSFIGVWVTGNVYPPATH*QMKAFT Trigger: GGTGAATGCCTTCATCTGTCAATGTGTGGCAGGAGG...GTAAACATTCCCTGTAACCCACACTCCAATGAAGCTACTGAATATTTGCATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCAAGTTTTCGGAAGTAATACAGACCTCACTGTACTTCTGCCTCGCTGGATTCACTTTACCCACATaGAGAACTGGTCTGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GFKFSEVIQTSLYFCLAGFTLPT*RTGLFL Trigger: TAGAAACAGACCAGTTCTCCATGTGGGTAAAGTGAA...TCCAGCGAGGCAGAAGTACAGTGAGGTCTGTATTACTTCCGAAAACTTGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTGCTTGAAATTAGGAGTGAGCGGAATGGATTGCACAGGTATAGCAGAGAACAGCTTCATTGGAGTGTaGGTTACAGGGAATGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: CCLKLGVSGMDCTGIAENSFIGV*VTGNVY Trigger: GTAAACATTCCCTGTAACCCACACTCCAATGAAGCT...GTTCTCTGCTATACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CAA 90 bp | CTTTCAAAACAAACAATATTTTGGCAACAGAGACATCACTGTTGCTaGAAATTAGGAGTGAGCGGAATGGATTGCACAGGTATAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LSKQTIFWQQRHHCC*KLGVSGMDCTGIAE Trigger: CTCTGCTATACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTGTTTTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CAA 90 bp | CATGCTTTCAAAACAAACAATATTTTGGCAACAGAGACATCACTGTaGCTTGAAATTAGGAGTGAGCGGAATGGATTGCACAGGTATAGC | + |
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Preference number: 2 (lower is better) Translates to: HAFKTNNILATETSL*LEIRSERNGLHRYS Trigger: GCTATACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTGTTTTGAAAGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | GGCAGAACCCGCCCAAGCACCCCTGAAGGATGGGACTaGACAACCGTGGGCCTTGAGAGCTACCACAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GRTRPSTPEGWD*TTVGLESYHRE Trigger: CTCTCTGTGGTAGCTCTCAAGGCCCACGGTTGTTCAGTCCCATCCTTCAGGGGTGCTTGGGCGGGTTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | AACCCTCGGCGGTCCCTCCTGCCACACATTGACAGATaGAGGCATTCACCGGTGCTGGGCTGCGTTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: NPRRSLLPHIDR*RHSPVLGCVQS Trigger: GCTCTGAACGCAGCCCAGCACCGGTGAATGCCTTCATCTGTCAATGTGTGGCAGGAGGGACCGCCGAGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 72 bp | TCCTGCCACACATTGACAGATGAAGGCATTCACCGGTaGTGGGCTGCGTTCAGAGCCCCTTGTGAGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: SCHTLTDEGIHR*WAAFRAPCEDS Trigger: TGAGTCCTCACAAGGGGCTCTGAACGCAGCCCAGCACCGGTGAATGCCTTCATCTGTCAATGTGTGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CCA 72 bp | GCCCAAGCACCCCTGAAGGATGGGACTGAACAACCGTaGGCCTTGAGAGCTACCACAGAGAGTGTCAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: AQAPLKDGTEQP*ALRATTESVKD Trigger: GTCTTTGACACTCTCTGTGGTAGCTCTCAAGGCCCACGGTTGTTCAGTCCCATCCTTCAGGGGTGCTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CCA 72 bp | TGCCACACATTGACAGATGAAGGCATTCACCGGTGCTaGGCTGCGTTCAGAGCCCCTTGTGAGGACTCACTG | + |
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Preference number: 3 (lower is better) Translates to: CHTLTDEGIHRC*AAFRAPCEDSL Trigger: CAGTGAGTCCTCACAAGGGGCTCTGAACGCAGCCCAGCACCGGTGAATGCCTTCATCTGTCAATGTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | GGGGAGATGGAGGGAGAGGGAGAGACGACTGCACAGTaGAGTACTCGCTGTAGTGCTCATCAGTTTCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GEMEGEGETTAQ*STRCSAHQFPL Trigger: AAGGGGAAACTGATGAGCACTACAGCGAGTACTTCACTGTGCAGTCGTCTCTCCCTCTCCCTCCATCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CCA 72 bp | CTGAGGCGTGTGGCTAGGCTCACAAAAGCTCCTCTGTaGCCCCAGTTGCCTGCACGATCATTTACAAACAAT | + |
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Preference number: 3 (lower is better) Translates to: LRRVARLTKAPL*PQLPARSFTNN Trigger: ATTGTTTGTAAATGATCGTGCAGGCAACTGGGGCCACAGAGGAGCTTTTGTGAGCCTAGCCACACGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | TTTCCCCTTGAGCATCACCATCTTCTAAGGAAGCCTTaGCTGAGGCGTGTGGCTAGGCTCACAAAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: FPLEHHHLLRKP*LRRVARLTKAP Trigger: AGGAGCTTTTGTGAGCCTAGCCACACGCCTCAGTCAAGGCTTCCTTAGAAGATGGTGATGCTCAAGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | CCCCTTGTGAGGACTCACTGCAAAAGGCACAAGAAATaGACAGGGAAGCAGTTAGATTCGCCTACGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: PLVRTHCKRHKK*TGKQLDSPTAP Trigger: TGGTGCCGTAGGCGAATCTAACTGCTTCCCTGTTCATTTCTTGTGCCTTTTGCAGTGAGTCCTCACAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | AACCTTACACACTGGACAAATCTTACAGCATCCCGCTaGCGGAAAACACACATCCAGAAGAGTCCACAGCGC | + |
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Preference number: 3 (lower is better) Translates to: NLTHWTNLTASR*RKTHIQKSPQR Trigger: GCGCTGTGGACTCTTCTGGATGTGTGTTTTCCGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 72 bp | TGGCTAGGCTCACAAAAGCTCCTCTGTGGCCCCAGTTaGCTGCACGATCATTTACAAACAATGTGGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: WLGSQKLLCGPS*LHDHLQTMWNE Trigger: CTCATTCCACATTGTTTGTAAATGATCGTGCAGGCAACTGGGGCCACAGAGGAGCTTTTGTGAGCCTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 72 bp | AAGTTTTCGGAAGTAATACAGACCTCACTGTACTTCTaGCTCGCTGGAGCACTACCAATTCCCATGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KFSEVIQTSLYF*LAGALPIPMEQ Trigger: CTGCTCCATGGGAATTGGTAGTGCTCCAGCGAGGCAGAAGTACAGTGAGGTCTGTATTACTTCCGAAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CCA 72 bp | CTGCTCCCTTCAGAAATAAGGAGCAGTGTACCACTTTaGCAAAACCTTACACACTGGACAAATCTTACAGCA | + |
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Preference number: 3 (lower is better) Translates to: LLPSEIRSSVPL*QNLTHWTNLTA Trigger: TGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGTACACTGCTCCTTATTTCTGAAGGGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR TCA 72 bp | ATGGATTGCACAGGTATAGCAGAGAACTTTCTGGAGTaGTGCAAATATTCAGTAGCTTCATTGGAGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: MDCTGIAENFLE*CKYSVASLECG Trigger: CCCACACTCCAATGAAGCTACTGAATATTTGCATCACTCCAGAAAGTTCTCTGCTATACCTGTGCAATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR GCA 72 bp | AAACAAACAATATTTTGGCAACAGAGACATCACTGTTaGTTGAAATTAGGAGTGAGCGGAATGGATTGCACA | + |
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Preference number: 3 (lower is better) Translates to: KQTIFWQQRHHC*LKLGVSGMDCT Trigger: TGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR TCA 90 bp | TGGTGGTGCATCCATTCAATGCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCATTGCCCCGCCGCCGCTaGCTGCGCCGATGCCATCGA | + |
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Preference number: 4 (lower is better) Translates to: WWCIHSMLLPSEIRSSVPLPRRR*LRRCHR Trigger: TCGATGGCATCGGCGCAGTCAGCGGCGGCGGGGCAA...TGGTACACTGCTCCTTATTTCTGAAGGGAGCAGCATTGAATGGATGCACCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR TCA 90 bp | GCTACCTTGGTATTAGTGCGAAGGCTGCAAGGGCAGAACCCGCCCAAGCACCCCCTGGGTTGTGTGAGCTaGTACCCAGATAGGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: ATLVLVRRLQGQNPPKHPLGCVS*YPDRRC Trigger: GCATCTCCTATCTGGGTATCAGCTCACACAACCCAG...GGGGTGCTTGGGCGGGTTCTGCCCTTGCAGCCTTCGCACTAATACCAAGGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | AGGCGTGTGGCTAGGCTCACAAAAGCTCCTCTGTGGCCCCAGTTGCCTGCACGAGTCATGACTTTTGCTTaGCGTTGCTGGGAAGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RRVARLTKAPLWPQLPARVMTFA*RCWEAL Trigger: TAAGGCTTCCCAGCAACGCCAAGCAAAAGTCATGAC...TCGTGCAGGCAACTGGGGCCACAGAGGAGCTTTTGTGAGCCTAGCCACACGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| 3UTR CAA 72 bp | GCACCCCTGAAGGATGGGACTGAACAACCGTGGGCCTaGAGAGCTACCACAGAGAGTGTCAAAGACTACCTG | + |
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Preference number: 4 (lower is better) Translates to: APLKDGTEQPWA*RATTESVKDYL Trigger: CAGGTAGTCTTTGACACTCTCTGTGGTAGCTCTCAAGGCCCACGGTTGTTCAGTCCCATCCTTCAGGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | ATTAGTGCGAAGGCTGCAAGGGCAGAACCCGCCCAAGCACCCCTGAAGGATGGGCAGGTAATACCAGCCTaGTTGAGTAAACTGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ISAKAARAEPAQAPLKDGQVIPA*LSKLGC Trigger: ACAACCCAGTTTACTCAACCAGGCTGGTATTACCTG...CCCATCCTTCAGGGGTGCTTGGGCGGGTTCTGCCCTTGCAGCCTTCGCACTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | CATCCCGCTGACGGAAAACACACATCCAGAAGAGTCCACAGCGCATCCTGTCACATCCTTGTAGTTGGTTaGGAAGGGCTTCGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HPADGKHTSRRVHSASCHILVVG*EGLRAG Trigger: CCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGAT...GTGACAGGATGCGCTGTGGACTCTTCTGGATGTGTGTTTTCCGTCAGCGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR GCA 90 bp | CCAGCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAACCCGCCGCCGCTGACTaGGCCGATGCCATCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: PAKMHHVPYLLLIIVSLKPAAAD*ADAIEL Trigger: GAGTTCGATGGCATCGGCGCAGTCAGCGGCGGCGGG...TTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | GACAAATCTTACAGCATCCCGCTGACGGAAAACACACATCCAGAAGAGTCCACACGTTGGTTGAGAACTTaGCGCAGCGTGAAGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DKSYSIPLTENTHPEESTRWLRT*RSVKRC Trigger: GCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACG...TGTGGACTCTTCTGGATGTGTGTTTTCCGTCAGCGGGATGCTGTAAGATTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR GCA 90 bp | TGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATAGAGGGTAGCTGCCTTTaGGACCTGTGGTCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CTMSPIYSSLSLASKAHIEGSCL*DLWSEW Trigger: CCACTCTGACCACAGGTCGCAAAGGCAGCTACCCTC...TATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | GCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCACTTTGGCAAAACCTTACACATTTGCTTGGCGTTGCTaGGAAGCCTTAGGTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AAPFRNKEQCTTLAKPYTFAWRC*EALGWL Trigger: CAGCCAACCTAAGGCTTCCCAGCAACGCCAAGCAAA...TGTGTAAGGTTTTGCCAAAGTGGTACACTGCTCCTTATTTCTGAAGGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | CATCCCGCTGACGGAAAACACACATCCAGAAGAGTCCACAGCGCATCCTGTCACGGTCATGATAATGCTTaGCACCCAAAATCCATCTTA | + |
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Preference number: 4 (lower is better) Translates to: HPADGKHTSRRVHSASCHGHDNA*HPKSIL Trigger: TAAGATGGATTTTGGGTGCCAAGCATTATCATGACC...GTGACAGGATGCGCTGTGGACTCTTCTGGATGTGTGTTTTCCGTCAGCGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | GCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCAGCCCAGCCATGCCCTaGGTATTTCACACGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: AKMHHVPYLLLIIVSLKGSPAMP*VFHTDV Trigger: AACGTCCGTGTGAAATACCCAGGGCATGGCTGGGCT...GCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | CTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCAAAATCCGCGGCGGCGGTCATaGCTTTTGCTTGGCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: LKGSYIDPSKSEFALNQNPRRRS*LLLGVA Trigger: AGCAACGCCAAGCAAAAGTCATGACCGCCGCCGCGG...ATTTTGGTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR TCA 90 bp | GTGTACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGATTATCGCTCGCTATaGTTCTCACTCGCTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VYHFGKTLHTGQILQHPADYRSL*FSLAGD Trigger: GTCTCCAGCGAGTGAGAATCATAGCGAGCGATAATC...AGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | GTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCCACTCCATGGCTCCTaGGCCGTCATCAACCCACTT | + |
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Preference number: 4 (lower is better) Translates to: VSLKGSYIDPSKSEFALNPLHGS*AVINPL Trigger: AAGTGGGTTGATGACGGCCCAGGAGCCATGGAGTGG...GTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | TGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATAAGCCCAGCCATGCCCTaGGTATTTCACACGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: CTMSPIYSSLSLASKAHISPAMP*VFHTDV Trigger: AACGTCCGTGTGAAATACCCAGGGCATGGCTGGGCT...TATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | TGGTGGTGCATCCATTCAATGCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCAGGTAGCCAGCTGATGTaGGACATTATAATATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WWCIHSMLLPSEIRSSVPGSQLM*DIIIWQ Trigger: CTGCCATATTATAATGTCTCACATCAGCTGGCTACC...TGGTACACTGCTCCTTATTTCTGAAGGGAGCAGCATTGAATGGATGCACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR GCA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAATCGCAGCCCAGCCATaGCCTGGGTATTTCACACGG | + |
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Preference number: 4 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSIAAQP*PGYFTR Trigger: CCGTGTGAAATACCCAGGGCATGGCTGGGCTGCGAT...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | GCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCATAATGTCCACTCCATaGCTCCTGGGCCGTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: AKMHHVPYLLLIIVSLKGIMSTP*LLGRHQ Trigger: TTGATGACGGCCCAGGAGCCATGGAGTGGACATTAT...GCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCACGTTGGTTGAGAACTTaGCGCAGCGTGAAGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSRWLRT*RSVKRC Trigger: GCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACG...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | ACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGACGTCCAGTTGTTTAAAATaGAGTCTCTGCTGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLAKPYTLDKSYSIPLTSSCLK*SLCCGV Trigger: AACTCCGCAGCAGAGACTTCATTTTAAACAACTGGA...CGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | CAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTATAATGTCCACTCCATaGCTCCTGGGCCGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKCTMSPIYSSLSLASKAIMSTP*LLGRHQ Trigger: TTGATGACGGCCCAGGAGCCATGGAGTGGACATTAT...AGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| 3UTR CAA 72 bp | GCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCACTTaGGCAAAACCTTACACACTGGACAAATCTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAPFRNKEQCTT*AKPYTLDKSYS Trigger: GCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGTACACTGCTCCTTATTTCTGAAGGGAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR TCA 90 bp | GTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACGATTATCGCTCGCTATaGTTCTCACTCGCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLKGSYIDPSKSEFALNDYRSL*FSLAGD Trigger: GTCTCCAGCGAGTGAGAATCATAGCGAGCGATAATC...GTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR GCA 90 bp | GCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCCGAAAGTTGTCAAACTaGGCAAACTCGAAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKMHHVPYLLLIIVSLKGRKLSN*ANSKVC Trigger: ACACACCTTCGAGTTTGCGCAGTTTGACAACTTTCG...GCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR CCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCACCACTCCATGGCTCCTaGGCCGTCATCAACCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSPLHGS*AVINPL Trigger: AAGTGGGTTGATGACGGCCCAGGAGCCATGGAGTGG...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | GTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCAGGTAATAGGTCGTTaGTTGAGAACTTGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLKGSYIDPSKSEFALNQVIGR*LRTWRS Trigger: GCTGCGCCAAGTTCTCAACCAACGACCTATTACCTG...GTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCACCACAGCTTCTTCCCTaGCATCTTTGCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSPQLLP*HLCIPH Trigger: GTGTGGAATGCAAAGATGTCAGGGAAGAAGCTGTGG...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR TCA 90 bp | TGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATAGGTAGCCAGCTGATGTaGGACATTATAATATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTMSPIYSSLSLASKAHIGSQLM*DIIIWQ Trigger: CTGCCATATTATAATGTCTCACATCAGCTGGCTACC...TATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR GCA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAACTTTTGCTTGGCGTTaGTGGGAAGCCTTAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSTFAWR*WEALGW Trigger: CCAACCTAAGGCTTCCCAGCAACGCCAAGCAAAAGT...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAAACCTTCCAGAGTTCCTaGTCCAGCAGCAAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLIIVSLKGSYIDPSKSETFQSS*SSSKEE Trigger: CTCTTCCTTGCTGCTGGACCAGGAACTCTGGAAGGT...TTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCAGGTAATACCAGCCTaGTTGAGTAAACTGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKCTMSPIYSSLSLASKAQVIPA*LSKLGC Trigger: ACAACCCAGTTTACTCAACCAGGCTGGTATTACCTG...AGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAAATCCTTGTAGTTGGTTaGGAAGGGCTTCGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIIVSLKGSYIDPSKSEILVVG*EGLRAG Trigger: CCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGAT...TTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR TCA 90 bp | CTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCCTGGGTTGTGTGAGCTaGTACCCAGATAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIIVSLKGSYIDPSKSEFLGCVS*YPDRRC Trigger: GCATCTCCTATCTGGGTATCAGCTCACACAACCCAG...GAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCGAAAGTTGTCAAACTaGGCAAACTCGAAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLKGSYIDPSKSEFALNRKLSN*ANSKVC Trigger: ACACACCTTCGAGTTTGCGCAGTTTGACAACTTTCG...GTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAACCTTCCAGAGTTCCTaGTCCAGCAGCAAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSTFQSS*SSSKEE Trigger: CTCTTCCTTGCTGCTGGACCAGGAACTCTGGAAGGT...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| 3UTR CAA 72 bp | CAAACAATATTTTGGCAACAGAGACATCACTGTTGCTaGAAATTAGGAGTGAGCGGAATGGATTGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTIFWQQRHHCC*KLGVSGMDCTG Trigger: ACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACAGTGATGTCTCTGTTGCCAAAATATTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR TCA 90 bp | CTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCCCACAGCTTCTTCCCTaGCATCTTTGCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LIIVSLKGSYIDPSKSEFPQLLP*HLCIPH Trigger: GTGTGGAATGCAAAGATGTCAGGGAAGAAGCTGTGG...GAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | ATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGTCCAGTTGTTTAAAATaGAGTCTCTGCTGCGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLKGSYIDPSKSEFALSSCLK*SLCCGV Trigger: AACTCCGCAGCAGAGACTTCATTTTAAACAACTGGA...CAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCACAGGTAATAGGTCGTTaGTTGAGAACTTGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSQVIGR*LRTWRS Trigger: GCTGCGCCAAGTTCTCAACCAACGACCTATTACCTG...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR TCA 90 bp | GTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCAACATAGTAGGCAGTaGGCTGAAGATTTACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLKGSYIDPSKSEFALNQHSRQ*AEDLHK Trigger: CTTATGTAAATCTTCAGCTCACTGCCTACTATGTTG...GTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAAATCATCCTTGTAGTTaGTTGGGAAGGGCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSNHPCS*LGRASS Trigger: GCTCGAAGCCCTTCCCAACCAACTACAAGGATGATT...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCAATCATCCTTGTAGTTaGTTGGGAAGGGCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIIVSLKGSYIDPSKSEFNHPCS*LGRASS Trigger: GCTCGAAGCCCTTCCCAACCAACTACAAGGATGATT...GAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR GCA 90 bp | CTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCAAAATTTGGTATACCACACCTaGAGCTCTTGTATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGSYIDPSKSEFALNQNLVYHT*SSCISL Trigger: GAGAGAAATACAAGAGCTGCAGGTGTGGTATACCAA...ATTTTGGTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAGCTTCACTAAAAAGTaGGTACTCAACATTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSSFTKK*VLNIEI Trigger: GATTTCAATGTTGAGTACCCACTTTTTAGTGAAGCT...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAAAGCTTCACTAAAAAGTaGGTACTCAACATTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLIIVSLKGSYIDPSKSESFTKK*VLNIEI Trigger: GATTTCAATGTTGAGTACCCACTTTTTAGTGAAGCT...TTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR GCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCATCCACTTTTAGAATATaGAAAGAGGCACCAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSSTFRI*KEAPKF Trigger: AAACTTTGGTGCCTCTTTGCATATTCTAAAAGTGGA...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | ATATTAAGTGCATCTATCCAAAAACATCAGGAGATGATCCAAATCTGTGAGCTAATAATATGGCAGATATaGCCGTATACACATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILSASIQKHQEMIQICELIIWQI*PYTHRM Trigger: CATTCTATGTGTATACGGCCATATCTGCCATATTAT...TAGCTCACAGATTTGGATCATCTCCTGATGTTTTTGGATAGATGCACTTAATAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CCA 90 bp | TTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAATAATATGGCAGATATaGCCGTATACACATAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLIIVSLKGSYIDPSKSIIWQI*PYTHRM Trigger: CATTCTATGTGTATACGGCCATATCTGCCATATTAT...TGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS GCA 90 bp | AACTGCGCAAACTCGAAGGTGTGTGTTCCGATCGCAGCCCAGCCATaGCCTGGGTATTTCACACGGACGTTTTTCCATAGGATCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NCANSKVCVPIAAQP*PGYFTRTFFHRIVP Trigger: CGGCACGATCCTATGGAAAAACGTCCGTGTGAAATACCCAGGGCATGGCTGGGCTGCGATCGGAACACACACCTTCGAGTTTGCGCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | ATTAGTGCGAAGGCTGCAAGGGCAGAACCCGCCCAAGCACCCCTGAAGGATGGGGTAATACCAGCCTGGTaGAGTAAACTGGGTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISAKAARAEPAQAPLKDGVIPAW*SKLGCV Trigger: CACACAACCCAGTTTACTCAACCAGGCTGGTATTAC...CCCATCCTTCAGGGGTGCTTGGGCGGGTTCTGCCCTTGCAGCCTTCGCACTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS GCA 90 bp | GGTCCAGTGGTGATCGCCTATAACACTGATTGTGCTGGAAGCGTCTaGAGCCCAGGTAATAGGTCGTTGGTTGAGAACTTGGCGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GPVVIAYNTDCAGSV*SPGNRSLVENLAQR Trigger: ACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGCACAATCAGTGTTATAGGCGATCACCACTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS TCA 90 bp | CTGCCGCTGCCGTCAAGGAGCCATAGAGTATCCAGTTGTTTAAAATaGAGTCTCTGCTGCGGAGTTCCCAGCTTGGTATACCACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPSRSHRVSSCLK*SLCCGVPSLVYHTC Trigger: GCAGGTGTGGTATACCAAGCTGGGAACTCCGCAGCAGAGACTTCATTTTAAACAACTGGATACTCTATGGCTCCTTGACGGCAGCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | ATTAGTGCGAAGGCTGCAAGGGCAGAACCCGCCCAAGCACCCCTGAAGGATGGGGCGCCAACATTACTGTaGATAGTGCTAAAATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISAKAARAEPAQAPLKDGAPTLL*IVLKSS Trigger: TGAAGATTTTAGCACTATCAACAGTAATGTTGGCGC...CCCATCCTTCAGGGGTGCTTGGGCGGGTTCTGCCCTTGCAGCCTTCGCACTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CAA 90 bp | ACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGACGTCGTTGGTTGAGAACTaGGCGCAGCGTGAAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTLAKPYTLDKSYSIPLTSLVEN*AQREAV Trigger: CACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGA...CGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS CCA 90 bp | ACTAAAAAGTGGGTACTCAACATTGAAATCATCCTTGTAGTTGGTTaGGAAGGGCTTCGAGCTGGGAGGGGGAGGGTAGCTGCCTTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TKKWVLNIEIILVVG*EGLRAGRGRVAAFA Trigger: CGCAAAGGCAGCTACCCTCCCCCTCCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATGATTTCAATGTTGAGTACCCACTTTTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR CAA 90 bp | ACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGACGCATCCTTGTAGTTGGTaGGGAAGGGCTTCGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTLAKPYTLDKSYSIPLTHPCSW*GRASSW Trigger: CCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATG...CGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR CAA 90 bp | AGGCGTGTGGCTAGGCTCACAAAAGCTCCTCTGTGGCCCCAGTTGCCTGCACGACTCTGTAAGAGCCATTaGCAAAAATCCAGAAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRVARLTKAPLWPQLPARLCKSH*QKSRKR Trigger: TCTTTTTCTGGATTTTTGCAAATGGCTCTTACAGAG...TCGTGCAGGCAACTGGGGCCACAGAGGAGCTTTTGTGAGCCTAGCCACACGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR CAA 90 bp | TGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATAGGCCAGCTGAAGCCTTaGCCCAGCCATCCAGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTMSPIYSSLSLASKAHIGQLKP*PSHPGN Trigger: ATTCCCTGGATGGCTGGGCAAAGGCTTCAGCTGGCC...TATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGCATCCATTCAATGCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCAGTAATAGGTCGTTGGTaGAGAACTTGGCGCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: WWCIHSMLLPSEIRSSVPVIGRW*RTWRSV Trigger: CACGCTGCGCCAAGTTCTCAACCAACGACCTATTAC...TGGTACACTGCTCCTTATTTCTGAAGGGAGCAGCATTGAATGGATGCACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS TCA 90 bp | CCGCATGTCCTGAAGCATACGTTATCCATCCACCCAGGTCAGCTGTaGCTCTGTAAGAGCCATTTGCAAAAATCCAGAAAAAGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHVLKHTLSIHPGQL*LCKSHLQKSRKRLL Trigger: CAGGAGTCTTTTTCTGGATTTTTGCAAATGGCTCTTACAGAGTCACAGCTGACCTGGGTGGATGGATAACGTATGCTTCAGGACATGCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS-3UTR CAA 90 bp | ACCACTTTGGCAAAACCTTACACACTGGACAAATCTTACAGCATCCCGCTGACGTCTTCCCTGACATCTTaGCATTCCACACTGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTLAKPYTLDKSYSIPLTSSLTS*HSTLCR Trigger: CCTACACAGTGTGGAATGCAAAGATGTCAGGGAAGA...CGTCAGCGGGATGCTGTAAGATTTGTCCAGTGTGTAAGGTTTTGCCAAAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATCCTTGTAGTTGGTaGGGAAGGGCTTCGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKCTMSPIYSSLSLASKAHPCSW*GRASSW Trigger: CCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATG...AGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
||
| CDS TCA 90 bp | GCAGCAAGGAAGAGGAAATCGGCTCCCAGAGATTATCGCTCGCTATaGTTCTCACTCGCTGGAGACCTTGATAATCCAGCATTTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AARKRKSAPRDYRSL*FSLAGDLDNPAFFL Trigger: TAAGAAAAATGCTGGATTATCAAGGTCTCCAGCGAGTGAGAATCATAGCGAGCGATAATCTCTGGGAGCCGATTTCCTCTTCCTTGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTCCCTTCAGAAATAAGGAGCAGTGTACCACTTTGGCAAAACCTTACACAGTTCAGTGCCATCTGTaGTTTGTCCATCACCACCTA | + |
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Preference number: 5 (lower is better) Translates to: AAPFRNKEQCTTLAKPYTVQCHL*FVHHHL Trigger: TAGGTGGTGATGGACAAACAACAGATGGCACTGAAC...TGTGTAAGGTTTTGCCAAAGTGGTACACTGCTCCTTATTTCTGAAGGGAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CAA 90 bp | CCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCATCGTTGGTTGAGAACTaGGCGCAGCGTGAAGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PYLLLIIVSLKGSYIDPSSLVEN*AQREAV Trigger: CACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGA...TGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTGTAATAGGTCGTTGGTaGAGAACTTGGCGCAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QKCTMSPIYSSLSLASKAVIGRW*RTWRSV Trigger: CACGCTGCGCCAAGTTCTCAACCAACGACCTATTAC...AGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | CCAGCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAACCAGGTAATAGGTCGTaGGTTGAGAACTTGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: PAKMHHVPYLLLIIVSLKPGNRS*VENLAQ Trigger: CTGCGCCAAGTTCTCAACCAACGACCTATTACCTGG...TTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | TGTTGCTTGAAATTAGGAGTGAGCGGAATGGATTGCACAGGTATAGCAGAGAACCACTCGCTGGAGACCTaGATAATCCAGCATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: CCLKLGVSGMDCTGIAENHSLET*IIQHFS Trigger: AGAAAAATGCTGGATTATCAAGGTCTCCAGCGAGTG...GTTCTCTGCTATACCTGTGCAATCCATTCCGCTCACTCCTAATTTCAAGCAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CAA 90 bp | TGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAAGGCTCATATAGTAATACCAGCCTGGTaGAGTAAACTGGGTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: CTMSPIYSSLSLASKAHIVIPAW*SKLGCV Trigger: CACACAACCCAGTTTACTCAACCAGGCTGGTATTAC...TATATGAGCCTTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | ATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGCACTCGCTGGAGACCTaGATAATCCAGCATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IVSLKGSYIDPSKSEFALHSLET*IIQHFS Trigger: AGAAAAATGCTGGATTATCAAGGTCTCCAGCGAGTG...CAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | CTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCCCAGGTAATAGGTCGTaGGTTGAGAACTTGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: LIIVSLKGSYIDPSKSEFPGNRS*VENLAQ Trigger: CTGCGCCAAGTTCTCAACCAACGACCTATTACCTGG...GAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | GTGATGCAAATATTCAGTAGCTTCATTGGAGTGTGGGTTACAGGGAATGTTTACCCAAATTCCAAGCAATaGTGGAGGTCATATTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VMQIFSSFIGVWVTGNVYPNSKQ*WRSYCH Trigger: ATGGCAATATGACCTCCACAATTGCTTGGAATTTGG...GTAAACATTCCCTGTAACCCACACTCCAATGAAGCTACTGAATATTTGCATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS-3UTR CAA 90 bp | CTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGAACCAAAATCCACACCTGCAGCTCTaGTATTTCTCTCAAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: LKGSYIDPSKSEFALNQNPHLQL*YFSQRS Trigger: GGATCTTTGAGAGAAATACAAGAGCTGCAGGTGTGG...ATTTTGGTTCAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | ATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCGCCCTGGCGCCAACATTACTGTaGATAGTGCTAAAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: IVSLKGSYIDPSKSEFALAPTLL*IVLKSS Trigger: TGAAGATTTTAGCACTATCAACAGTAATGTTGGCGC...CAGGGCGAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | CCAGCAAAAATGCACCATGTCCCCTATTTACTCCTCATTATCGTTAGCCTCAAACTCTGTAAGAGCCATTaGCAAAAATCCAGAAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: PAKMHHVPYLLLIIVSLKLCKSH*QKSRKR Trigger: TCTTTTTCTGGATTTTTGCAAATGGCTCTTACAGAG...TTTGAGGCTAACGATAATGAGGAGTAAATAGGGGACATGGTGCATTTTTGCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS-3UTR CAA 90 bp | CTCATTATCGTTAGCCTCAAAGGCTCATATATAGATCCATCAAAATCAGAATTCCCAAATTCCAAGCAATaGTGGAGGTCATATTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LIIVSLKGSYIDPSKSEFPNSKQ*WRSYCH Trigger: ATGGCAATATGACCTCCACAATTGCTTGGAATTTGG...GAATTCTGATTTTGATGGATCTATATATGAGCCTTTGAGGCTAACGATAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS GCA 72 bp | ACGGCTCGCCGAGCCCGCGGCGGCGGTCATGACTTTTaGTTGGCGTTGCTGGGAAGCCTTAGGTTGGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TARRARGGGHDF*LALLGSLRLAV Trigger: AACAGCCAACCTAAGGCTTCCCAGCAACGCCAAGCAAAAGTCATGACCGCCGCCGCGGGCTCGGCGAGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS CCA 72 bp | CTCGCCGAGCCCGCGGCGGCGGTCATGACTTTTGCTTaGCGTTGCTGGGAAGCCTTAGGTTGGCTGTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LAEPAAAVMTFA*RCWEALGWLLA Trigger: GGCTAACAGCCAACCTAAGGCTTCCCAGCAACGCCAAGCAAAAGTCATGACCGCCGCCGCGGGCTCGGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS CAA 72 bp | GCTCGCCGAGCCCGCGGCGGCGGTCATGACTTTTGCTaGGCGTTGCTGGGAAGCCTTAGGTTGGCTGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: ARRARGGGHDFC*ALLGSLRLAVS Trigger: GCTAACAGCCAACCTAAGGCTTCCCAGCAACGCCAAGCAAAAGTCATGACCGCCGCCGCGGGCTCGGCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS CAA 72 bp | CTGGAAGCGTCTGCAGCCCAGGTAATAGGTCGTTGGTaGAGAACTTGGCGCAGCGTGAAGCGGTGCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: LEASAAQVIGRW*RTWRSVKRCSR Trigger: CCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CCA 72 bp | AATCATCCTTGTAGTTGGTTGGGAAGGGCTTCGAGCTaGGAGGGGGAGGGTAGCTGCCTTTGCGACCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: NHPCSWLGRASS*EGEGSCLCDLW Trigger: CCACAGGTCGCAAAGGCAGCTACCCTCCCCCTCCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 72 bp | TGTGCTGGAAGCGTCTGCAGCCCAGGTAATAGGTCGTaGGTTGAGAACTTGGCGCAGCGTGAAGCGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CAGSVCSPGNRS*VENLAQREAVL Trigger: GAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 90 bp | AACACTGATTGTGCTGGAAGCGTCTGCAGCCCAGGTAATAGGTCGTaGGTTGAGAACTTGGCGCAGCGTGAAGCGGTGCTCACGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NTDCAGSVCSPGNRS*VENLAQREAVLTVF Trigger: GAAGACCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGCACAATCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 72 bp | GTCTGCAGCCCAGGTAATAGGTCGTTGGTTGAGAACTaGGCGCAGCGTGAAGCGGTGCTCACGGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: VCSPGNRSLVEN*AQREAVLTVFI Trigger: AATGAAGACCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 90 bp | CTGATTGTGCTGGAAGCGTCTGCAGCCCAGGTAATAGGTCGTTGGTaGAGAACTTGGCGCAGCGTGAAGCGGTGCTCACGGTCTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: LIVLEASAAQVIGRW*RTWRSVKRCSRSSL Trigger: TAATGAAGACCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGCACAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS GCA 72 bp | AACTCGAAGGTGTGTGTTCCGATCGCAGCCCAGCCATaGCCTGGGTATTTCACACGGACGTTTTTCCATAGG | + |
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Preference number: 6 (lower is better) Translates to: NSKVCVPIAAQP*PGYFTRTFFHR Trigger: CCTATGGAAAAACGTCCGTGTGAAATACCCAGGGCATGGCTGGGCTGCGATCGGAACACACACCTTCGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CCA 72 bp | TCTGCAGCCCAGGTAATAGGTCGTTGGTTGAGAACTTaGCGCAGCGTGAAGCGGTGCTCACGGTCTTCATTA | + |
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Preference number: 6 (lower is better) Translates to: SAAQVIGRWLRT*RSVKRCSRSSL Trigger: TAATGAAGACCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 90 bp | GCTGGAAGCGTCTGCAGCCCAGGTAATAGGTCGTTGGTTGAGAACTaGGCGCAGCGTGAAGCGGTGCTCACGGTCTTCATTATTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: AGSVCSPGNRSLVEN*AQREAVLTVFIIHV Trigger: TACATGAATAATGAAGACCGTGAGCACCGCTTCACGCTGCGCCAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CCA 72 bp | CCAGATAGGAGATGCTACGACATAATGTCCACTCCATaGCTCCTGGGCCGTCATCAACCCACTTCGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: PDRRCYDIMSTP*LLGRHQPTSSI Trigger: TATGGACGAAGTGGGTTGATGACGGCCCAGGAGCCATGGAGTGGACATTATGTCGTAGCATCTCCTATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CCA 72 bp | TGGGTACTCAACATTGAAATCATCCTTGTAGTTGGTTaGGAAGGGCTTCGAGCTGGGAGGGGGAGGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: WVLNIEIILVVG*EGLRAGRGRVA Trigger: AGCTACCCTCCCCCTCCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATGATTTCAATGTTGAGTACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS TCA 72 bp | TGTGTACCATCGTTTAGCTGTAACGTCCGCATGTCCTaGAGCATACGTTATCCATCCACCCAGGTCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CVPSFSCNVRMS*SIRYPSTQVSC Trigger: ACAGCTGACCTGGGTGGATGGATAACGTATGCTTCAGGACATGCGGACGTTACAGCTAAACGATGGTACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS GCA 72 bp | GTGATCGCCTATAACACTGATTGTGCTGGAAGCGTCTaGAGCCCAGGTAATAGGTCGTTGGTTGAGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: VIAYNTDCAGSV*SPGNRSLVENL Trigger: CAAGTTCTCAACCAACGACCTATTACCTGGGCTGCAGACGCTTCCAGCACAATCAGTGTTATAGGCGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS TCA 72 bp | AAGAGGAAATCGGCTCCCAGAGATTATCGCTCGCTATaGTTCTCACTCGCTGGAGACCTTGATAATCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KRKSAPRDYRSL*FSLAGDLDNPA Trigger: TGCTGGATTATCAAGGTCTCCAGCGAGTGAGAATCATAGCGAGCGATAATCTCTGGGAGCCGATTTCCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS TCA 72 bp | CCGTCAAGGAGCCATAGAGTATCCAGTTGTTTAAAATaGAGTCTCTGCTGCGGAGTTCCCAGCTTGGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: PSRSHRVSSCLK*SLCCGVPSLVY Trigger: GTATACCAAGCTGGGAACTCCGCAGCAGAGACTTCATTTTAAACAACTGGATACTCTATGGCTCCTTGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 90 bp | TTCTGGTTCAATATGCGACTCCAACAGCCTGCGCCAACATTACTGTaGATAGTGCTAAAATCTTCAGATGACCACAGCTTCTTCCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FWFNMRLQQPAPTLL*IVLKSSDDHSFFPD Trigger: GTCAGGGAAGAAGCTGTGGTCATCTGAAGATTTTAGCACTATCAACAGTAATGTTGGCGCAGGCTGTTGGAGTCGCATATTGAACCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 72 bp | AATCTTCAGATGACCACAGCTTCTTCCCTGACATCTTaGCATTCCACACTGTGTAGGTTCCAGGATAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NLQMTTASSLTS*HSTLCRFQDSE Trigger: CTCACTATCCTGGAACCTACACAGTGTGGAATGCAAAGATGTCAGGGAAGAAGCTGTGGTCATCTGAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 90 bp | TCTCATCTAGCTCATAGTGCATGTGCGAGGGTTCAGTGCCATCTGTaGTTTGTCCATCACCACCTATCTCCACTTTTAGAATATGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SHLAHSACARVQCHL*FVHHHLSPLLEYAK Trigger: CTTTGCATATTCTAAAAGTGGAGATAGGTGGTGATGGACAAACAACAGATGGCACTGAACCCTCGCACATGCACTATGAGCTAGATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS TCA 72 bp | CTGAAGCATACGTTATCCATCCACCCAGGTCAGCTGTaGCTCTGTAAGAGCCATTTGCAAAAATCCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKHTLSIHPGQL*LCKSHLQKSRK Trigger: TTTTCTGGATTTTTGCAAATGGCTCTTACAGAGTCACAGCTGACCTGGGTGGATGGATAACGTATGCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS GCA 72 bp | GATGTAATTCTGGTTCAATATGCGACTCCAACAGCCTaGGCCAACATTACTGTTGATAGTGCTAAAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVILVQYATPTA*ANITVDSAKIF Trigger: GAAGATTTTAGCACTATCAACAGTAATGTTGGCGCAGGCTGTTGGAGTCGCATATTGAACCAGAATTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CCA 72 bp | TCCCAATATAATCAATGTCCAGGTCATGATAATGCTTaGCACCCAAAATCCATCTTACAACATAGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQYNQCPGHDNA*HPKSILQHSRQ Trigger: CTGCCTACTATGTTGTAAGATGGATTTTGGGTGCCAAGCATTATCATGACCTGGACATTGATTATATTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021390.9 |
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| CDS CCA 72 bp | AGTCTGATCAGCAAAATTCGGAGCTTCACTAAAAAGTaGGTACTCAACATTGAAATCATCCTTGTAGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLISKIRSFTKK*VLNIEIILVVG Trigger: ACCAACTACAAGGATGATTTCAATGTTGAGTACCCACTTTTTAGTGAAGCTCCGAATTTTGCTGATCAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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| CDS CAA 72 bp | ATAATATGGCAGATATGGCCGTATACACATAGAATGTaGATGACTCATAGTTTCAATGATGATGGTGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IIWQIWPYTHRM*MTHSFNDDGEV Trigger: AACCTCACCATCATCATTGAAACTATGAGTCATCAACATTCTATGTGTATACGGCCATATCTGCCATATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021390.9 ENSMUST00000221063.2 |
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