Pregenerated sensors for GAL3ST4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075593Ensembl transcript IDs: ENSMUST00000100530.8, ENSMUST00000161279.8, ENSMUST00000161647.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGTGAAATTAGCACAGCTCCATAACAAATATTTCGTAGAGAAATaGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: IVKLAQLHNKYFVEK*TYIMPQTFSVSLSS Trigger: AGATGACAGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGCTAATTTCACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| 3UTR-3UTR CCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTGGCAAAGTTAGGGGTTaGGGGAGGCAACAGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: IFRREMDIYHAPNFLCVAGKVRG*GRQQIL Trigger: CAGAATCTGTTGCCTCCCCCAACCCCTAACTTTGCC...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTATCTGTCTTGAGGCTTaGAGTGGCAAAGTTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: IFRREMDIYHAPNFLCVAICLEA*SGKVRG Trigger: ACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGAT...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAATACATGAATCTGTCTTaGGGCTTGAAGTGGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQYMNLS*GLKWQS Trigger: ACTTTGCCACTTCAAGCCTCAAGACAGATTCATGTA...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTTACATGAATCTGTCTTaGGGCTTGAAGTGGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: IFRREMDIYHAPNFLCVAYMNLS*GLKWQS Trigger: ACTTTGCCACTTCAAGCCTCAAGACAGATTCATGTA...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| 3UTR CCA 72 bp | TTAGCACAGCTCCATAACAAATATTTCGTAGAGAAATaGACATATATCATGCCCCAAACTTTCTCTGTGTCG | + |
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Preference number: 3 (lower is better) Translates to: LAQLHNKYFVEK*TYIMPQTFSVS Trigger: CGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAAGAGCCTCATGGTCCTaGCAGGAGACAGAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGWGRQQILLGFLEEVQTRASWS*QETEGP Trigger: TGGGCCCTCTGTCTCCTGCCAGGACCATGAGGCTCT...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGATTCGACCAGGTCAAAGACTaGGTCCAACCAGGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: SVLRLEVAKLGVGGGNRFDQVKD*VQPGQT Trigger: GGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTC...GAATCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGAGACCAGGTCAAAGACTaGGTCCAACCAGGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRDQVKD*VQPGQT Trigger: GGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTC...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | TCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGATTCCCTGGGCATTGTGCATaGAGCCCACCACATCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVLRLEVAKLGVGGGNRFPGHCA*SPPHRP Trigger: TGGACGATGTGGTGGGCTTCATGCACAATGCCCAGG...GAATCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR GCA 90 bp | AGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACCTAGAGGTCCTCCATACGGGCGTAGTGGTTaGCACGGGCTCCGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SKLPVPSKGNTYAPRGPPYGRSG*HGLRVC Trigger: ACAGACCCGGAGCCCGTGGCAACCACTACGCCCGTA...TGGAGGACCTCTAGGTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR GCA 90 bp | TCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGATTCCCAGCCTGGGCATTGTaGATGAAGCCCACCACATCG | + |
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Preference number: 4 (lower is better) Translates to: SVLRLEVAKLGVGGGNRFPAWAL*MKPTTS Trigger: CGATGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...GAATCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACACAAATCCAATGGTCATaGAGACTCCCAGAGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: RGWGRQQILLGFLEEVQTQIQWS*RLPEPP Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGATTTG...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGAGGGTCTCTGGGTAGCTaGGGACTCACTTTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRGSLGS*GLTFMV Trigger: GACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCC...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACACAGGCCAGACCCCATTaGATAAAGGATGAGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: RGWGRQQILLGFLEEVQTQARPH*IKDEGL Trigger: TAGGCCCTCATCCTTTATCCAATGGGGTCTGGCCTG...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR GCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTACGGGCGTAGTGGTTaGCACGGGCTCCGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSYGRSG*HGLRVC Trigger: ACAGACCCGGAGCCCGTGGCAACCACTACGCCCGTA...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGAGGGGACTCACTTTCATaGTCTTTGTCTCTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRGDSLS*SLSLGE Trigger: CTCCCCCAGAGACAAAGACCATGAAAGTGAGTCCCC...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGAGGAGACAAGGCTGGCTaGCTGCTTGTAACTATCAGC | + |
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Preference number: 4 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRGDKAG*LLVTIS Trigger: GCTGATAGTTACAAGCAGCCAGCCAGCCTTGTCTCC...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACATCAGAAGGCATGACCTaGAGTACCTCTTTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RGWGRQQILLGFLEEVQTSEGMT*STSLRL Trigger: CAACCTCAAAGAGGTACTTCAGGTCATGCCTTCTGA...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACAGAGCCTCATGGTCCTaGCAGGAGACAGAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSHLRANFLFLPREIHTHRASWS*QETEGP Trigger: TGGGCCCTCTGTCTCCTGCCAGGACCATGAGGCTCT...GTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAAGCCTGGAAAAGCTTTaGGTAGCCAAACTGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: RGWGRQQILLGFLEEVQTSLEKL*VAKLVV Trigger: CACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCT...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGACTGAGGAGACAAGGCTaGCTGGCTGCTTGTAACTAT | + |
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Preference number: 4 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRLRRQG*LAACNY Trigger: ATAGTTACAAGCAGCCAGCCAGCCTTGTCTCCTCAG...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCCCTGGGCATTGTGCATaGAGCCCACCACATCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSPGHCA*SPPHRP Trigger: TGGACGATGTGGTGGGCTTCATGCACAATGCCCAGG...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTCCAGCCTGGGCATTGTaGATGAAGCCCACCACATCG | + |
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Preference number: 4 (lower is better) Translates to: AGISRGSPDNNSLILEQTPAWAL*MKPTTS Trigger: CGATGTGGTGGGCTTCATGCACAATGCCCAGGCTGG...AGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | AGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACCTAGAGGTCCTCCAGAGATTTGGGGTCTCTaGGTAGCTGGGGACTCACTT | + |
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Preference number: 4 (lower is better) Translates to: SKLPVPSKGNTYAPRGPPEIWGL*VAGDSL Trigger: AAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTC...TGGAGGACCTCTAGGTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR GCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTTACGGGCGTAGTGGTTaGCACGGGCTCCGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAYGRSG*HGLRVC Trigger: ACAGACCCGGAGCCCGTGGCAACCACTACGCCCGTA...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACGGGTCTCTGGGTAGCTaGGGACTCACTTTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: QSHLRANFLFLPREIHTHGSLGS*GLTFMV Trigger: GACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCC...GTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCGTAGCTGGAGAGATTTaGGGTCTCTGGGTAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSVAGEI*GLWVAG Trigger: CCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTAC...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCCAAATCCAATGGTCATaGAGACTCCCAGAGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSQIQWS*RLPEPP Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGATTTG...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACAGTACTCGGCCACCATaGCCAGGTCAAAGACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QSHLRANFLFLPREIHTHSTRPP*PGQRLS Trigger: ACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACT...GTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | AGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACCTAGAGGTCCTCCACCCACAGACTACGGTTaGAGTGAATATAAAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SKLPVPSKGNTYAPRGPPPTDYG*SEYKEP Trigger: GGGCTCTTTATATTCACTTCAACCGTAGTCTGTGGG...TGGAGGACCTCTAGGTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | CAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTAGAAGGCTTGAGGATTaGACAGGAAGGCGGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QQILLGFLEEVQTTTVSSRRLED*TGRRPK Trigger: CTTTGGCCGCCTTCCTGTCCAATCCTCAAGCCTTCT...AGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | CAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTGGGGACTCACTTTCATaGTCTTTGTCTCTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QQILLGFLEEVQTTTVSSGDSLS*SLSLGE Trigger: CTCCCCCAGAGACAAAGACCATGAAAGTGAGTCCCC...AGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | CAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTGAGATTTGGGGTCTCTaGGTAGCTGGGGACTCACTT | + |
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Preference number: 4 (lower is better) Translates to: QQILLGFLEEVQTTTVSSEIWGL*VAGDSL Trigger: AAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTC...AGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCGTAGCTGGAGAGATTTaGGGTCTCTGGGTAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NSLILEQTSCSFQGKYIRVAGEI*GLWVAG Trigger: CCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTAC...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCGGAGACAAGGCTGGCTaGCTGCTTGTAACTATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSGDKAG*LLVTIS Trigger: GCTGATAGTTACAAGCAGCCAGCCAGCCTTGTCTCC...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAAGACCAGGTCAAAGACTaGGTCCAACCAGGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQDQVKD*VQPGQT Trigger: GGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTC...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTCCTGGGCATTGTGCATaGAGCCCACCACATCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAPGHCA*SPPHRP Trigger: TGGACGATGTGGTGGGCTTCATGCACAATGCCCAGG...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTCATGGTCTTTGTCTCTaGGGGAGAGGGCAAACCAAA | + |
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Preference number: 4 (lower is better) Translates to: AGISRGSPDNNSLILEQTHGLCL*GRGQTK Trigger: TTTGGTTTGCCCTCTCCCCCAGAGACAAAGACCATG...AGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CCA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCCAGGCCAGACCCCATTaGATAAAGGATGAGGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: NSLILEQTSCSFQGKYIRQARPH*IKDEGL Trigger: TAGGCCCTCATCCTTTATCCAATGGGGTCTGGCCTG...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTCAGAAGGCATGACCTaGAGTACCTCTTTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSSEGMT*STSLRL Trigger: CAACCTCAAAGAGGTACTTCAGGTCATGCCTTCTGA...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACTCAGAAGGCATGACCTaGAGTACCTCTTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHLRANFLFLPREIHTHSEGMT*STSLRL Trigger: CAACCTCAAAGAGGTACTTCAGGTCATGCCTTCTGA...GTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTCCCACAGACTACGGTTaGAGTGAATATAAAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQILLGFLEEVQTTTVSSPTDYG*SEYKEP Trigger: GGGCTCTTTATATTCACTTCAACCGTAGTCTGTGGG...AGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCAGCCTGGAAAAGCTTTaGGTAGCCAAACTGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSSLEKL*VAKLVV Trigger: CACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCT...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | CAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAGAAGGCTTGAGGATTaGACAGGAAGGCGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQQSHLRANFLFLPREIHRRLED*TGRRPK Trigger: CTTTGGCCGCCTTCCTGTCCAATCCTCAAGCCTTCT...ATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCCATGGTCTTTGTCTCTaGGGGAGAGGGCAAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSLILEQTSCSFQGKYIRHGLCL*GRGQTK Trigger: TTTGGTTTGCCCTCTCCCCCAGAGACAAAGACCATG...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAAGGGTCTCTGGGTAGCTaGGGACTCACTTTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQGSLGS*GLTFMV Trigger: GACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCC...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAGTAGCTGGAGAGATTTaGGGTCTCTGGGTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNSLILEQTSCSFQGKYIVAGEI*GLWVAG Trigger: CCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTAC...TATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTCAAATCCAATGGTCATaGAGACTCCCAGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAQIQWS*RLPEPP Trigger: GGGTGGCTCTGGGAGTCTTCATGACCATTGGATTTG...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTAGTACTCGGCCACCATaGCCAGGTCAAAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVASTRPP*PGQRLS Trigger: ACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACT...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | AACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAAGTACTCGGCCACCATaGCCAGGTCAAAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNSLILEQTSCSFQGKYISTRPP*PGQRLS Trigger: ACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACT...TATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCAGCCTGGAAAAGCTTTaGGTAGCCAAACTGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLILEQTSCSFQGKYIRSLEKL*VAKLVV Trigger: CACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCT...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAAGAAGGCTTGAGGATTaGACAGGAAGGCGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NNSLILEQTSCSFQGKYIRRLED*TGRRPK Trigger: CTTTGGCCGCCTTCCTGTCCAATCCTCAAGCCTTCT...TATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTGAGATTTGGGGTCTCTaGGTAGCTGGGGACTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAEIWGL*VAGDSL Trigger: AAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTC...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCACGGTACAATATGTAGCTaGAGAGATTTGGGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHLRANFLFLPREIHTHGTICS*RDLGSL Trigger: CAGAGACCCCAAATCTCTCCAGCTACATATTGTACC...GTGCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAAGGAGACAAGGCTGGCTaGCTGCTTGTAACTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQGDKAG*LLVTIS Trigger: GCTGATAGTTACAAGCAGCCAGCCAGCCTTGTCTCC...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCAGGTTGAATCTCATGTaGTGGCAGAGGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSPDNNSLILEQTSCSRLNLM*WQRIWK Trigger: TTTCCATATCCTCTGCCATCACATGAGATTCAACCT...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTAGGTTGAATCTCATGTaGTGGCAGAGGATATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQILLGFLEEVQTTTVSSRLNLM*WQRIWK Trigger: TTTCCATATCCTCTGCCATCACATGAGATTCAACCT...AGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTCATGGTCTTTGTCTCTaGGGGAGAGGGCAAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAHGLCL*GRGQTK Trigger: TTTGGTTTGCCCTCTCCCCCAGAGACAAAGACCATG...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAACTGAGGAGACAAGGCTaGCTGGCTGCTTGTAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQLRRQG*LAACNY Trigger: ATAGTTACAAGCAGCCAGCCAGCCTTGTCTCCTCAG...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTCCCACAGACTACGGTTaGAGTGAATATAAAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAPTDYG*SEYKEP Trigger: GGGCTCTTTATATTCACTTCAACCGTAGTCTGTGGG...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAGGTACAATATGTAGCTaGAGAGATTTGGGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNSLILEQTSCSFQGKYIGTICS*RDLGSL Trigger: CAGAGACCCCAAATCTCTCCAGCTACATATTGTACC...TATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTGGTACAATATGTAGCTaGAGAGATTTGGGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFRREMDIYHAPNFLCVAGTICS*RDLGSL Trigger: CAGAGACCCCAAATCTCTCCAGCTACATATTGTACC...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS GCA 90 bp | TTAGCCAGAGCTTCTCTTCGAGCCCGGAGCTCAGCCACAGCACGTTaGAGTCGACTCCTGCCATACTGTTCTATCCGCGCCCACAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: LARASLRARSSATAR*SRLLPYCSIRAHRL Trigger: TAGTCTGTGGGCGCGGATAGAACAGTATGGCAGGAGTCGACTGCAACGTGCTGTGGCTGAGCTCCGGGCTCGAAGAGAAGCTCTGGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS TCA 90 bp | CATCTGCCAACAGGACCAGTGACTCATCAAAGTACTCGGCCACCATaGCCAGGTCAAAGACTGAGTCCAACCAGGCCAGACCCCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLPTGPVTHQSTRPP*PGQRLSPTRPDPIG Trigger: TCCAATGGGGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACTTTGATGAGTCACTGGTCCTGTTGGCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTGGGGGAGGCAACAGATTCTGCTGGGATTTCTAGAGGAAGTCCAGACATTTCCAGCCTGGGCATaGTGCATGAAGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RGWGRQQILLGFLEEVQTFPAWA*CMKPTT Trigger: TGTGGTGGGCTTCATGCACAATGCCCAGGCTGGAAA...TGTCTGGACTTCCTCTAGAAATCCCAGCAGAATCTGTTGCCTCCCCCAACCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS GCA 90 bp | AGGGCAAACCAAAGTCAAACCATAGTAAGTTACGGGCGTAGTGGTTaGCACGGGCTCCGGGTCTGTAGAAGGCTTGAGGATTGGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RANQSQTIVSYGRSG*HGLRVCRRLEDWTG Trigger: TCCTGTCCAATCCTCAAGCCTTCTACAGACCCGGAGCCCGTGGCAACCACTACGCCCGTAACTTACTATGGTTTGACTTTGGTTTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | GAATCTGTCTTGAGGCTTGAAGTGGCAAAGTTAGGGGTTGGGGGAGGCAACAGAGGGTCTGTAGAAGGCTaGAGGATTGGACAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESVLRLEVAKLGVGGGNRGSVEG*RIGQEG Trigger: GCCTTCCTGTCCAATCCTCAAGCCTTCTACAGACCC...TCTGTTGCCTCCCCCAACCCCTAACTTTGCCACTTCAAGCCTCAAGACAGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS CCA 90 bp | ACCATGACCAGGTCAAAGACTGAGTCCAACCAGGCCAGACCCCATTaGATAAAGGATGAGGGCCTAAAATCTGAGGAGACAAGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TMTRSKTESNQARPH*IKDEGLKSEETRLA Trigger: AGCCAGCCTTGTCTCCTCAGATTTTAGGCCCTCATCCTTTATCCAATGGGGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTCATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS CCA 90 bp | GAAGGTACAATATGTAGCTGGAGAGATTTGGGGTCTCTGGGTAGCTaGGGACTCACTTTCATGGTCTTTGTCTCTGGGGGAGAGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGTICSWRDLGSLGS*GLTFMVFVSGGEGK Trigger: TTTGCCCTCTCCCCCAGAGACAAAGACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACATATTGTACCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCGGGTCTGTAGAAGGCTaGAGGATTGGACAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGSPDNNSLILEQTSCSGSVEG*RIGQEG Trigger: GCCTTCCTGTCCAATCCTCAAGCCTTCTACAGACCC...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTGTAGCTGGAGAGATTaGGGGTCTCTGGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGISRGSPDNNSLILEQTCSWRD*GSLGSW Trigger: CCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACA...AGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS TCA 90 bp | GCCCAATCCAAGTTATTCCAAGCTCGGGCCTGTTTGGTTAGCTGCTaGTCTTCACCAGTCACCACAGTCTTATTGGCAGTTCTGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQSKLFQARACLVSC*SSPVTTVLLAVLIR Trigger: TCTTATCAGAACTGCCAATAAGACTGTGGTGACTGGTGAAGATCAGCAGCTAACCAAACAGGCCCGAGCTTGGAATAACTTGGATTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCTGTAGCTGGAGAGATTaGGGGTCTCTGGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLILEQTSCSFQGKYIRCSWRD*GSLGSW Trigger: CCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACA...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCTTTCCAGCCTGGGCATaGTGCATGAAGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: NSLILEQTSCSFQGKYIRFPAWA*CMKPTT Trigger: TGTGGTGGGCTTCATGCACAATGCCCAGGCTGGAAA...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS CCA 90 bp | GAATATAAAGAGCCCAATCCAAGTTATTCCAAGCTCGGGCCTGTTTaGTTAGCTGCTGATCTTCACCAGTCACCACAGTCTTATTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EYKEPNPSYSKLGPV*LAADLHQSPQSYWQ Trigger: CTGCCAATAAGACTGTGGTGACTGGTGAAGATCAGCAGCTAACCAAACAGGCCCGAGCTTGGAATAACTTGGATTGGGCTCTTTATATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | CAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATTTTCCAGCCTGGGCATaGTGCATGAAGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QQQSHLRANFLFLPREIHFPAWA*CMKPTT Trigger: TGTGGTGGGCTTCATGCACAATGCCCAGGCTGGAAA...ATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTCGTAGAGAAATGGACATATATCATGCCCCAAACTTTCTCTGTGTCGCTTGTAGCTGGAGAGATTaGGGGTCTCTGGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IFRREMDIYHAPNFLCVACSWRD*GSLGSW Trigger: CCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACA...AGCGACACAGAGAAAGTTTGGGGCATGATATATGTCCATTTCTCTACGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCAAGCCTGGAAAAGCTTaGGGTAGCCAAACTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: NSLILEQTSCSFQGKYIRKPGKA*GSQTGS Trigger: ACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCTT...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTTCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTGTCACCACAGTCTTATaGGCAGTTCTGATAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: AGISRGSPDNNSLILEQTVTTVL*AVLIRL Trigger: GAGTCTTATCAGAACTGCCAATAAGACTGTGGTGAC...AGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGAAATCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCGTCACCACAGTCTTATaGGCAGTTCTGATAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGSPDNNSLILEQTSCSVTTVL*AVLIRL Trigger: GAGTCTTATCAGAACTGCCAATAAGACTGTGGTGAC...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGGAAGTCCAGACAACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCCGTTCACATTCCTCTTaGTCTTTCTGGTTTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGSPDNNSLILEQTSCSRSHSS*SFWFSP Trigger: TGGACTAAACCAGAAAGACAAAGAGGAATGTGAACG...GGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTTGTCTGGACTTCCTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CAA 90 bp | GCACAGCTCCATAACAAATATTTCGTAGAGAAATGGACATATATCATGCCCCAAAAGCCTGGAAAAGCTTaGGGTAGCCAAACTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: AQLHNKYFVEKWTYIMPQKPGKA*GSQTGS Trigger: ACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCTT...TTGGGGCATGATATATGTCCATTTCTCTACGAAATATTTGTTATGGAGCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CAA 90 bp | AACAACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATAAAGCCTGGAAAAGCTTaGGGTAGCCAAACTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: NNSLILEQTSCSFQGKYIKPGKA*GSQTGS Trigger: ACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCTT...TATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS-3UTR CAA 90 bp | AACAGTCTCATCTTAGAGCAAACTTCCTGTTCCTTCCAAGGGAAATACATACGCCGTTCACATTCCTCTTaGTCTTTCTGGTTTAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: NSLILEQTSCSFQGKYIRRSHSS*SFWFSP Trigger: TGGACTAAACCAGAAAGACAAAGAGGAATGTGAACG...GCGTATGTATTTCCCTTGGAAGGAACAGGAAGTTTGCTCTAAGATGAGACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS GCA 72 bp | CCCGGAGCTCAGCCACAGCACGTTGCAGTCGACTCCTaGCATACTGTTCTATCCGCGCCCACAGACTACGGT | + |
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Preference number: 6 (lower is better) Translates to: PGAQPQHVAVDS*HTVLSAPTDYG Trigger: ACCGTAGTCTGTGGGCGCGGATAGAACAGTATGGCAGGAGTCGACTGCAACGTGCTGTGGCTGAGCTCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS GCA 72 bp | GCTTCTCTTCGAGCCCGGAGCTCAGCCACAGCACGTTaGAGTCGACTCCTGCCATACTGTTCTATCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ASLRARSSATAR*SRLLPYCSIRA Trigger: GGCGCGGATAGAACAGTATGGCAGGAGTCGACTGCAACGTGCTGTGGCTGAGCTCCGGGCTCGAAGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | TGCCACGGGCTCCGGGTCTGTAGAAGGCTTGAGGATTaGACAGGAAGGCGGCCAAAGACGGTGCCTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CHGLRVCRRLED*TGRRPKTVPFG Trigger: TCCGAAAGGCACCGTCTTTGGCCGCCTTCCTGTCCAATCCTCAAGCCTTCTACAGACCCGGAGCCCGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CAA 72 bp | AGCTTCTCTTCGAGCCCGGAGCTCAGCCACAGCACGTaGCAGTCGACTCCTGCCATACTGTTCTATCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SFSSSPELSHST*QSTPAILFYPR Trigger: GCGCGGATAGAACAGTATGGCAGGAGTCGACTGCAACGTGCTGTGGCTGAGCTCCGGGCTCGAAGAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CAA 90 bp | TTTAGCCAGAGCTTCTCTTCGAGCCCGGAGCTCAGCCACAGCACGTaGCAGTCGACTCCTGCCATACTGTTCTATCCGCGCCCACAGACT | + |
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Preference number: 6 (lower is better) Translates to: FSQSFSSSPELSHST*QSTPAILFYPRPQT Trigger: AGTCTGTGGGCGCGGATAGAACAGTATGGCAGGAGTCGACTGCAACGTGCTGTGGCTGAGCTCCGGGCTCGAAGAGAAGCTCTGGCTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS TCA 72 bp | CAGACTCCAGCACAGGGCATCTGCCAACAGGACCAGTaGCTCATCAAAGTACTCGGCCACCATGACCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QTPAQGICQQDQ*LIKVLGHHDQV Trigger: GACCTGGTCATGGTGGCCGAGTACTTTGATGAGTCACTGGTCCTGTTGGCAGATGCCCTGTGCTGGAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | GTTCCAGGGCTAGCACCGGAAGGTACAATATGTAGCTaGAGAGATTTGGGGTCTCTGGGTAGCTGGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: VPGLAPEGTICS*RDLGSLGSWGL Trigger: GAGTCCCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACATATTGTACCTTCCGGTGCTAGCCCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS TCA 72 bp | GTAGCCCCTGCTGGTCCCCATAGCGATGAAGGAGATTaGGCACAGAGCTGCTCCCAGATTTGTGTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VAPAGPHSDEGD*AQSCSQICVSS Trigger: TGAAGACACACAAATCTGGGAGCAGCTCTGTGCTCAATCTCCTTCATCGCTATGGGGACCAGCAGGGGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS TCA 72 bp | ACAGGACCAGTGACTCATCAAAGTACTCGGCCACCATaGCCAGGTCAAAGACTGAGTCCAACCAGGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TGPVTHQSTRPP*PGQRLSPTRPD Trigger: GTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACTTTGATGAGTCACTGGTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS GCA 72 bp | CAAAGTCAAACCATAGTAAGTTACGGGCGTAGTGGTTaGCACGGGCTCCGGGTCTGTAGAAGGCTTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: QSQTIVSYGRSG*HGLRVCRRLED Trigger: ATCCTCAAGCCTTCTACAGACCCGGAGCCCGTGGCAACCACTACGCCCGTAACTTACTATGGTTTGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CAA 90 bp | GTTCCAGGGCTAGCACCGGAAGGTACAATATGTAGCTGGAGAGATTaGGGGTCTCTGGGTAGCTGGGGACTCACTTTCATGGTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VPGLAPEGTICSWRD*GSLGSWGLTFMVFV Trigger: GACAAAGACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACATATTGTACCTTCCGGTGCTAGCCCTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS TCA 72 bp | ATCAAAGTACTCGGCCACCATGACCAGGTCAAAGACTaGGTCCAACCAGGCCAGACCCCATTGGATAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IKVLGHHDQVKD*VQPGQTPLDKG Trigger: TCCTTTATCCAATGGGGTCTGGCCTGGTTGGACTCAGTCTTTGACCTGGTCATGGTGGCCGAGTACTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | ATGGTAGCCTTTGACCTTAGAAGCCTGGAAAAGCTTTaGGTAGCCAAACTGGTAGTGGGCAGGCAGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MVAFDLRSLEKL*VAKLVVGRQGK Trigger: TTTGCCCTGCCTGCCCACTACCAGTTTGGCTACCCAAAGCTTTTCCAGGCTTCTAAGGTCAAAGGCTACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | ATATGTAGCTGGAGAGATTTGGGGTCTCTGGGTAGCTaGGGACTCACTTTCATGGTCTTTGTCTCTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: ICSWRDLGSLGS*GLTFMVFVSGG Trigger: TCCCCCAGAGACAAAGACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | GAGCCCAATCCAAGTTATTCCAAGCTCGGGCCTGTTTaGTTAGCTGCTGATCTTCACCAGTCACCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: EPNPSYSKLGPV*LAADLHQSPQS Trigger: AGACTGTGGTGACTGGTGAAGATCAGCAGCTAACCAAACAGGCCCGAGCTTGGAATAACTTGGATTGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | AGGTCAAAGACTGAGTCCAACCAGGCCAGACCCCATTaGATAAAGGATGAGGGCCTAAAATCTGAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RSKTESNQARPH*IKDEGLKSEET Trigger: TGTCTCCTCAGATTTTAGGCCCTCATCCTTTATCCAATGGGGTCTGGCCTGGTTGGACTCAGTCTTTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS TCA 72 bp | AAGTTATTCCAAGCTCGGGCCTGTTTGGTTAGCTGCTaGTCTTCACCAGTCACCACAGTCTTATTGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KLFQARACLVSC*SSPVTTVLLAV Trigger: AACTGCCAATAAGACTGTGGTGACTGGTGAAGATCAGCAGCTAACCAAACAGGCCCGAGCTTGGAATAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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| CDS CCA 72 bp | AAGGTACAATATGTAGCTGGAGAGATTTGGGGTCTCTaGGTAGCTGGGGACTCACTTTCATGGTCTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: KVQYVAGEIWGL*VAGDSLSWSLS Trigger: AGACAAAGACCATGAAAGTGAGTCCCCAGCTACCCAGAGACCCCAAATCTCTCCAGCTACATATTGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100530.8 ENSMUST00000161279.8 ENSMUST00000161647.8 |
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