Pregenerated sensors for GAL3ST3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047658Ensembl transcript IDs: ENSMUST00000061169.7
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTGTCTGGGAGCAGCTTAGGTGTGTGTAGGGAAGGTAGAACCTaGAAGACAATAGGGGACTTAGGCAGCCCTGGGAAGAACAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: CVSGSSLGVCREGRT*KTIGDLGSPGKNKS Trigger: GCTTTTGTTCTTCCCAGGGCTGCCTAAGTCCCCTATTGTCTTCCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCCAGACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 90 bp | GTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCTTaGTTCTGTGTGTCTGGGAGCAGCTTAGGTGTGTGTAGGGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: VVVVVKQQKAQPKNS*FCVSGSSLGVCREG Trigger: ACCTTCCCTACACACACCTAAGCTGCTCCCAGACACACAGAACCAAGAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTCATCCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGTGGGTGGCCCATCAATaGCATCCCAGAAAGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: CGHPLNTSVGSTPPNDRWWVAHQ*HPRKWG Trigger: ACCCCACTTTCTGGGATGGCATTGATGGGCCACCCA...CCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGGATGACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CAA 90 bp | GCAGTACTAGAACGCCCTTGGATTCTTCTCAAAGTCACCAACAAGTaGGGAAGGAGTGGGTGGCCCATCAATGCCATCCCAGAAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: AVLERPWILLKVTNK*GRSGWPINAIPESG Trigger: CCCACTTTCTGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTTGAGAAGAATCCAAGGGCGTTCTAGTACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCTGTACTAGAACGCCCTTaGATTCTTCTCAAAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: EEEVVVVVKQQKAQPKNSVLERP*ILLKVT Trigger: GGTGACTTTGAGAAGAATCCAAGGGCGTTCTAGTAC...AGAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR GCA 72 bp | CACCAACAAGTTGGGAAGGAGTGGGTGGCCCATCAATaGCATCCCAGAAAGTGGGGTTCGAACGGGCGACAC | + |
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Preference number: 3 (lower is better) Translates to: HQQVGKEWVAHQ*HPRKWGSNGRH Trigger: GTGTCGCCCGTTCGAACCCCACTTTCTGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR-3UTR CAA 90 bp | CCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGGGTGCTCAGAAAGTCACCAACAAGTaGGGAAGGAGTGGGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: PLNTSVGSTPPNDRWGAQKVTNK*GRSGWP Trigger: GGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTT...CTGAGCACCCCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 72 bp | GGCAGCCCTGGGAAGAACAAAAGCCCAGGTGCTGACTaGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GSPGKNKSPGAD*KYSIFPGLSPS Trigger: AGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGGGCTTTTGTTCTTCCCAGGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 72 bp | CTTCTCAAAGTCACCAACAAGTTGGGAAGGAGTGGGTaGCCCATCAATGCCATCCCAGAAAGTGGGGTTCGA | + |
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Preference number: 3 (lower is better) Translates to: LLKVTNKLGRSG*PINAIPESGVR Trigger: TCGAACCCCACTTTCTGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTTGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 72 bp | AACGCCCTTGGATTCTTCTCAAAGTCACCAACAAGTTaGGAAGGAGTGGGTGGCCCATCAATGCCATCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NALGFFSKSPTS*EGVGGPSMPSQ Trigger: CTGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTTGAGAAGAATCCAAGGGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 72 bp | GATTCTTCTCAAAGTCACCAACAAGTTGGGAAGGAGTaGGTGGCCCATCAATGCCATCCCAGAAAGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: DSSQSHQQVGKE*VAHQCHPRKWG Trigger: ACCCCACTTTCTGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTTGAGAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CCA 72 bp | CAGAAAAAGGCAGGGTGGGCAGTACTAGAACGCCCTTaGATTCTTCTCAAAGTCACCAACAAGTTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QKKAGWAVLERP*ILLKVTNKLGR Trigger: CCTTCCCAACTTGTTGGTGACTTTGAGAAGAATCCAAGGGCGTTCTAGTACTGCCCACCCTGCCTTTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGGTTCGAACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACGCACCTCCAGCGCCTCGGGGATGGTaGCCAGGCGCGACGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVRTGDTRMAGSDADAPPAPRGW*PGATRQ Trigger: CTGCCTCGTCGCGCCTGGCCACCATCCCCGAGGCGC...TGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGTTCGAACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | TCCCAGAAAGTGGGGTTCGAACGGGCGACACTAGGATGGCAGGCTCAGATGCAGGCCCGCCAGGTAGGCTaGGTCGTCACGAGGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SQKVGFERATLGWQAQMQARQVG*VVTRAA Trigger: CGCAGCCCTCGTGACGACGCAGCCTACCTGGCGGGC...CTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGTTCGAACCCCACTTTCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | ACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACGCACCTCCATTTGGACACTGCTCGCAGCTAGGGTaGGGCAGGGCCACCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGDTRMAGSDADAPPFGHCSQLG*GRATVR Trigger: CCTCACGGTGGCCCTGCCTCACCCTAGCTGCGAGCA...GTGTCCAAATGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATCCAGCGCCTCGGGGATaGTGGCCAGGCGCGACGAGG | + |
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Preference number: 4 (lower is better) Translates to: GNKRALMEQDLSSWRQADPAPRG*WPGATR Trigger: CCTCGTCGCGCCTGGCCACCATCCCCGAGGCGCTGG...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | ACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACGCACCTCCATTTGGACACCGGTCGAAGCGCAGATaGCTGGCCAGCATGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TGDTRMAGSDADAPPFGHRSKRR*LASMCG Trigger: CCCGCACATGCTGGCCAGCCATCTGCGCTTCGACCG...GTGTCCAAATGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | GGGGTTCGAACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACGCACCTCCAACTTTGCGGCTAGGCTaGCACGGCTGCAGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GVRTGDTRMAGSDADAPPTLRLG*HGCSCF Trigger: AAAGCAGCTGCAGCCGTGGCAGCCTAGCCGCAAAGT...TGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGTTCGAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATCGGGGGCCTCGTAGCTaGGTGCACGAAGTGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GNKRALMEQDLSSWRQADRGPRS*VHEVGR Trigger: TCGGCCCACTTCGTGCACCCAGCTACGAGGCCCCCG...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | CTCAAGGCCGTGGGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGCATTGGGCACGCGCCTaGAGGCCGGGCAGTACTGGT | + |
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Preference number: 4 (lower is better) Translates to: LKAVGNKRALMEQDLSSWHWARA*RPGSTG Trigger: ACCAGTACTGCCCGGCCTTCAGGCGCGTGCCCAATG...CCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCCCACGGCCTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | TCCCCAGAAAAAGGCAGGGTGGGCAGTACTAGAACGCCCTTGGATTCTTCTCAACCTCCACCTGGCGGATaGGGCCCGCCAGGTAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPEKGRVGSTRTPLDSSQPPPGG*GPPGRL Trigger: CAGCCTACCTGGCGGGCCTCATCCGCCAGGTGGAGG...TTGAGAAGAATCCAAGGGCGTTCTAGTACTGCCCACCCTGCCTTTTTCTGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATAGGCAGCGCGCGCGTTaGGCTTGGCGTAGAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: GNKRALMEQDLSSWRQADRQRAR*AWRRAR Trigger: ACGTGCTCTACGCCAAGCTCAACGCGCGCGCTGCCT...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | GGGGTTCGAACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACGCACCTCCATGCCACGGCTGCAGCTaGTTTGTACGAATCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVRTGDTRMAGSDADAPPCHGCS*FVRIWA Trigger: TGCCCAGATTCGTACAAAGCAGCTGCAGCCGTGGCA...TGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGTTCGAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATGGCGAAGTGCTCGCCTaGACGGTAGTAGGCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GNKRALMEQDLSSWRQADGEVLA*TVVGLG Trigger: CCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCC...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | CCAGGTGCTGACTGGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCTCTGGGGAAGACCTCCTCCACCTaGCGGATGAGGCCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGADWKYSIFPGLSPSLGKTSST*RMRPAR Trigger: CCTGGCGGGCCTCATCCGCCAGGTGGAGGAGGTCTT...CCCCAGAGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | TTCTGTGTGTCTGGGAGCAGCTTAGGTGTGTGTAGGGAAGGTAGAACCTGGAAGGAGGCAGGGCCACCGTaGGGTTGTGGCGTTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: FCVSGSSLGVCREGRTWKEAGPP*GCGVLR Trigger: TCGCAGAACGCCACAACCTCACGGTGGCCCTGCCTC...CTTCCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCCAGACACACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | CCAGGTGCTGACTGGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCTCTGGGGGCCAGAAGGTGGCGTTaGAATGGTCGTAGAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGADWKYSIFPGLSPSLGARRWR*NGRRGP Trigger: CGGGCCTCTACGACCATTTCAACGCCACCTTCTGGC...CCCCAGAGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | CCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGGGTGCTCAGAAAGCGACTCGAACATaGCCGCGGGTTCGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PLNTSVGSTPPNDRWGAQKATRT*PRVRAG Trigger: TCCTGCGCGAACCCGCGGCCATGTTCGAGTCGCTTT...CTGAGCACCCCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGCTTAGGTGTGTGTAGGGAAGGTAGAACCTGGAAGACAATAGGGGACCTGAGCTGCGACCCCTaGTGGATGAGGAGGCTTACG | + |
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Preference number: 4 (lower is better) Translates to: GSSLGVCREGRTWKTIGDLSCDP*WMRRLT Trigger: CGTAAGCCTCCTCATCCACCAGGGGTCGCAGCTCAG...GTCCCCTATTGTCTTCCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CAA 72 bp | CTAGGATGGCAGGCTCAGATGCAGACGCACCTCCATTaGGACACAGGGCTCAAGGCCGTGGGGAATAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LGWQAQMQTHLH*DTGLKAVGNKR Trigger: CCTTTTATTCCCCACGGCCTTGAGCCCTGTGTCCAAATGGAGGTGCGTCTGCATCTGAGCCTGCCATCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | CCAGGTGCTGACTGGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCTCTGGGGGTTCGCGCAGGATGGTaGCATAGATCGTGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGADWKYSIFPGLSPSLGVRAGW*HRSCLE Trigger: CTCCAGACACGATCTATGTCACCATCCTGCGCGAAC...CCCCAGAGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | TGTGGTCATCCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGGAGGCGCTCGAGTTCTaGACGGTCGAAGCGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: CGHPLNTSVGSTPPNDRWEALEF*TVEAQM Trigger: CATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTC...CCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGGATGACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | CTCAAGGCCGTGGGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGCTAGGCTGCCACGGCTaGAGCTGCTTTGTACGAATC | + |
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Preference number: 4 (lower is better) Translates to: LKAVGNKRALMEQDLSSWLGCHG*SCFVRI Trigger: GATTCGTACAAAGCAGCTGCAGCCGTGGCAGCCTAG...CCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCCCACGGCCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | TGTGGTCATCCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGAGCTGCGACCCCTGGTaGATGAGGAGGCTTACGGTG | + |
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Preference number: 4 (lower is better) Translates to: CGHPLNTSVGSTPPNDRWSCDPW*MRRLTV Trigger: CACCGTAAGCCTCCTCATCCACCAGGGGTCGCAGCT...CCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGGATGACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | TCCCAGAAAGTGGGGTTCGAACGGGCGACACTAGGATGGCAGGCTCAGATGCAGACTGGTTGTAGTAGCTaGAAAGCGACTCGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: SQKVGFERATLGWQAQMQTGCSS*KATRTW Trigger: CCATGTTCGAGTCGCTTTTCAGCTACTACAACCAGT...CTGCATCTGAGCCTGCCATCCTAGTGTCGCCCGTTCGAACCCCACTTTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | TCCCCAGAAAAAGGCAGGGTGGGCAGTACTAGAACGCCCTTGGATTCTTCTCAAGGAGGCTTACGGTGCTaGACCCTAGCACCAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SPEKGRVGSTRTPLDSSQGGLRC*TLAPTA Trigger: TGCTGTTGGTGCTAGGGTGCAGCACCGTAAGCCTCC...TTGAGAAGAATCCAAGGGCGTTCTAGTACTGCCCACCCTGCCTTTTTCTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | CCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGGGTGCTCAGCGGAACAGGATGTTCTaGACCGTAGTACCTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PLNTSVGSTPPNDRWGAQRNRMF*TVVPAV Trigger: GACAGCAGGTACTACGGTGCAGAACATCCTGTTCCG...CTGAGCACCCCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | CCAGGTGCTGACTGGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCTCTGGGGGGCTCATCATCTTGGTaGATTGCTGCAAGCGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PGADWKYSIFPGLSPSLGGSSSW*IAASAG Trigger: TCCAGCGCTTGCAGCAATCCACCAAGATGATGAGCC...CCCCAGAGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CAA 72 bp | GAACGCCCTTGGATTCTTCTCAAAGTCACCAACAAGTaGGGAAGGAGTGGGTGGCCCATCAATGCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: ERPWILLKVTNK*GRSGWPINAIP Trigger: TGGGATGGCATTGATGGGCCACCCACTCCTTCCCAACTTGTTGGTGACTTTGAGAAGAATCCAAGGGCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATATCATCTTGGTGGATTaGTGCAAGCGCTGGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: GNKRALMEQDLSSWRQADIILVD*CKRWRI Trigger: TATCCTCCAGCGCTTGCAGCAATCCACCAAGATGAT...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTGTCTGGGAGCAGCTTAGGTGTGTGTAGGGAAGGTAGAACCTGGAAGGAGGTTGTGGCGTTCTaGGAAGCGGAACAGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: FCVSGSSLGVCREGRTWKEVVAF*EAEQDV Trigger: AACATCCTGTTCCGCTTCGCAGAACGCCACAACCTC...CTTCCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCCAGACACACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | TCCCCAGAAAAAGGCAGGGTGGGCAGTACTAGAACGCCCTTGGATTCTTCTCAATGTTGTGAGCAAACATaGCGAAGTGCTCGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: SPEKGRVGSTRTPLDSSQCCEQT*RSARLD Trigger: GTCCAGGCGAGCACTTCGCCATGTTTGCTCACAACA...TTGAGAAGAATCCAAGGGCGTTCTAGTACTGCCCACCCTGCCTTTTTCTGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | TGTGGTCATCCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGCCTCAACAGATAGTTTaGGTACTGCACCTCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: CGHPLNTSVGSTPPNDRWPQQIV*VLHLGH Trigger: ATGCCCGAGGTGCAGTACTCAAACTATCTGTTGAGG...CCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGGATGACCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATCGAAGCGCAGATGGCTaGCCAGCATGTGCGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNRSADG*PACAGA Trigger: GGCCCCCGCACATGCTGGCCAGCCATCTGCGCTTCG...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| 3UTR CAA 72 bp | CCAGAAAAAGGCAGGGTGGGCAGTACTAGAACGCCCTaGGATTCTTCTCAAAGTCACCAACAAGTTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PEKGRVGSTRTP*DSSQSHQQVGK Trigger: CTTCCCAACTTGTTGGTGACTTTGAGAAGAATCCAAGGGCGTTCTAGTACTGCCCACCCTGCCTTTTTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR TCA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATGCGACCCCTGGTGGATaGGGAGGCTTACGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNATPGG*GGLRCC Trigger: GCAGCACCGTAAGCCTCCTCATCCACCAGGGGTCGC...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGCTTAGGTGTGTGTAGGGAAGGTAGAACCTGGAAGACAATAGGGGACAGCAGAATTTTCCTGTaGCTCATCATCTTGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GSSLGVCREGRTWKTIGDSRIFL*LIILVD Trigger: ATCCACCAAGATGATGAGCCACAGGAAAATTCTGCT...GTCCCCTATTGTCTTCCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | GAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCTGCTGGGTGCACGAAGTaGGCCGAGAAGTTTCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: EEEVVVVVKQQKAQPKNSAGCTK*AEKFRG Trigger: CCCGCGAAACTTCTCGGCCCACTTCGTGCACCCAGC...AGAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | GAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCTGGGTACCAACTGAGCTaGGACCCCTGGTGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: EEEVVVVVKQQKAQPKNSGYQLS*DPWWMR Trigger: CCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCC...AGAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCCGTCGTCACGAGGGCTaGGCTCATTGTCGCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RRRSSSSSQTTKSPTEEFRRHEG*AHCRLQ Trigger: TTGGAGGCGACAATGAGCGCAGCCCTCGTGACGACG...GAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR GCA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATATCTTGGTGGATTGCTaGAAGCGCTGGAGGATAGGT | + |
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Preference number: 4 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNILVDC*KRWRIG Trigger: ACCTATCCTCCAGCGCTTGCAGCAATCCACCAAGAT...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATTCTGTGGCTCATCATCTTaGTGGATTGCTGCAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RRRSSSSSQTTKSPTEEFCGSSS*WIAASA Trigger: AGCGCTTGCAGCAATCCACCAAGATGATGAGCCACA...GAATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 90 bp | ACGCTGGCGGGCCTCGCGCAGCTCGCGCGCTTCGCGCTCCACGCATaGGCGGCCCGCGCGCGCCACGCGACGCCAGAAGGTGGCGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: TLAGLAQLARFALHA*AARARHATPEGGVE Trigger: TTCAACGCCACCTTCTGGCGTCGCGTGGCGCGCGCGGGCCGCGCATGCGTGGAGCGCGAAGCGCGCGAGCTGCGCGAGGCCCGCCAGCGT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS TCA 90 bp | CGCATGCGCGGCCCGCGCGCGCCACGCGACGCCAGAAGGTGGCGTTaGAATGGTCGTAGAGGCCCGCATCGAGCGCGTTCCAGGTGCGCG | + |
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Preference number: 5 (lower is better) Translates to: RMRGPRAPRDARRWR*NGRRGPHRARSRCA Trigger: CGCGCACCTGGAACGCGCTCGATGCGGGCCTCTACGACCATTTCAACGCCACCTTCTGGCGTCGCGTGGCGCGCGCGGGCCGCGCATGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 90 bp | CGAGAAGACCTCCTCCACCTGGCGGATGAGGCCCGCCAGGTAGGCTaGGTCGTCACGAGGGCTGCGCTCATTGTCGCCTCCAAGGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: REDLLHLADEARQVG*VVTRAALIVASKVV Trigger: TACGACCTTGGAGGCGACAATGAGCGCAGCCCTCGTGACGACGCAGCCTACCTGGCGGGCCTCATCCGCCAGGTGGAGGAGGTCTTCTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | TCTGGAGGCATGAGGCGCTCGAGTTCTGCACGGTCGAAGCGCAGATaGCTGGCCAGCATGTGCGGGGGCCTCGTAGCTGGGTGCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: SGGMRRSSSARSKRR*LASMCGGLVAGCTK Trigger: CTTCGTGCACCCAGCTACGAGGCCCCCGCACATGCTGGCCAGCCATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTCATGCCTCCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | ACTTTGCGGCTAGGCTGCCACGGCTGCAGCTGCTTTGTACGAATCTaGGCAGCGGGTCGCAGCACCGGCTCGTCGCCAAAGCAACGACGC | + |
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Preference number: 5 (lower is better) Translates to: TLRLGCHGCSCFVRI*AAGRSTGSSPKQRR Trigger: GCGTCGTTGCTTTGGCGACGAGCCGGTGCTGCGACCCGCTGCCCAGATTCGTACAAAGCAGCTGCAGCCGTGGCAGCCTAGCCGCAAAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 90 bp | AGCAAACATGGCGAAGTGCTCGCCTGGACGGTAGTAGGCCTCGGGTaGGCGCAGGAAAGTCTCGAGCGACGCATTGGGCACGCGCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SKHGEVLAWTVVGLG*AQESLERRIGHAPE Trigger: TTCAGGCGCGTGCCCAATGCGTCGCTCGAGACTTTCCTGCGCGCACCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCCATGTTTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | GTCGAAGCGCAGATGGCTGGCCAGCATGTGCGGGGGCCTCGTAGCTaGGTGCACGAAGTGGGCCGAGAAGTTTCGCGGGTAACAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: VEAQMAGQHVRGPRS*VHEVGREVSRVTEL Trigger: CAGTTCTGTTACCCGCGAAACTTCTCGGCCCACTTCGTGCACCCAGCTACGAGGCCCCCGCACATGCTGGCCAGCCATCTGCGCTTCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 90 bp | GATGGTGACATAGATCGTGTCTGGAGGCATGAGGCGCTCGAGTTCTaGACGGTCGAAGCGCAGATGGCTGGCCAGCATGTGCGGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: DGDIDRVWRHEALEF*TVEAQMAGQHVRGP Trigger: AGGCCCCCGCACATGCTGGCCAGCCATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTCATGCCTCCAGACACGATCTATGTCACCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | CTTGTGAGTCTTCAGGAAGGCCACGGCCATGTGCTTGGCCCGAGGTaGCGATTCTCGCAGAGGCGGGCAGCTCAGAGGGAACAACTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LVSLQEGHGHVLGPR*RFSQRRAAQREQLG Trigger: CCCAAGTTGTTCCCTCTGAGCTGCCCGCCTCTGCGAGAATCGCCACCTCGGGCCAAGCACATGGCCGTGGCCTTCCTGAAGACTCACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | TACCTGCTGTCTTGTGAGTCTTCAGGAAGGCCACGGCCATGTGCTTaGCCCGAGGTGGCGATTCTCGCAGAGGCGGGCAGCTCAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: YLLSCESSGRPRPCA*PEVAILAEAGSSEG Trigger: TCCCTCTGAGCTGCCCGCCTCTGCGAGAATCGCCACCTCGGGCCAAGCACATGGCCGTGGCCTTCCTGAAGACTCACAAGACAGCAGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | GTCGTAGGCCAGCGTGTTGTGAGCAAACATGGCGAAGTGCTCGCCTaGACGGTAGTAGGCCTCGGGTGCGCGCAGGAAAGTCTCGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: VVGQRVVSKHGEVLA*TVVGLGCAQESLER Trigger: TCGCTCGAGACTTTCCTGCGCGCACCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCCATGTTTGCTCACAACACGCTGGCCTACGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | CATTGTCGCCTCCAAGGTCGTAGGCCAGCGTGTTGTGAGCAAACATaGCGAAGTGCTCGCCTGGACGGTAGTAGGCCTCGGGTGCGCGCA | + |
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Preference number: 5 (lower is better) Translates to: HCRLQGRRPACCEQT*RSARLDGSRPRVRA Trigger: TGCGCGCACCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCCATGTTTGCTCACAACACGCTGGCCTACGACCTTGGAGGCGACAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | GAACATGGCCGCGGGTTCGCGCAGGATGGTGACATAGATCGTGTCTaGAGGCATGAGGCGCTCGAGTTCTGCACGGTCGAAGCGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: EHGRGFAQDGDIDRV*RHEALEFCTVEAQM Trigger: CATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTCATGCCTCCAGACACGATCTATGTCACCATCCTGCGCGAACCCGCGGCCATGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 90 bp | CTCGCAGCTAGGGTGAGGCAGGGCCACCGTGAGGTTGTGGCGTTCTaGGAAGCGGAACAGGATGTTCTGCACCGTAGTACCTGCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LAARVRQGHREVVAF*EAEQDVLHRSTCCL Trigger: AAGACAGCAGGTACTACGGTGCAGAACATCCTGTTCCGCTTCGCAGAACGCCACAACCTCACGGTGGCCCTGCCTCACCCTAGCTGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | CAGCTCAGAGGGAACAACTTGGGGTACCAACTGAGCTGCGACCCCTaGTGGATGAGGAGGCTTACGGTGCTGCACCCTAGCACCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: QLRGNNLGYQLSCDP*WMRRLTVLHPSTNS Trigger: GCTGTTGGTGCTAGGGTGCAGCACCGTAAGCCTCCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTTCCCTCTGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | CCACTAAACACAAGTGTGGGCTCAACACCCCCAAATGACAGGTGGGGTGCTCAGAGGGCCACCGTGAGGTaGTGGCGTTCTGCGAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: PLNTSVGSTPPNDRWGAQRATVR*WRSAKR Trigger: CCGCTTCGCAGAACGCCACAACCTCACGGTGGCCCT...CTGAGCACCCCACCTGTCATTTGGGGGTGTTGAGCCCACACTTGTGTTTAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | CTCAGAGGGAACAACTTGGGGTACCAACTGAGCTGCGACCCCTGGTaGATGAGGAGGCTTACGGTGCTGCACCCTAGCACCAACAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LRGNNLGYQLSCDPW*MRRLTVLHPSTNSR Trigger: TCTGCTGTTGGTGCTAGGGTGCAGCACCGTAAGCCTCCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTTCCCTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | CAGTGCTCTTATGGGCCGAGGGGGAGGATTATCCAGGACAGATTCTaGCCTGGACCGCACACCACCGCGGCGTTTTTGCTTCCTCAACAG | + |
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Preference number: 5 (lower is better) Translates to: QCSYGPRGRIIQDRF*PGPHTTAAFLLPQQ Trigger: CTGTTGAGGAAGCAAAAACGCCGCGGTGGTGTGCGGTCCAGGCCAGAATCTGTCCTGGATAATCCTCCCCCTCGGCCCATAAGAGCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS TCA 90 bp | GGACCGCACACCACCGCGGCGTTTTTGCTTCCTCAACAGATAGTTTaGGTACTGCACCTCGGGCATAGCAAGCTTGAGGCAAGCCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: GPHTTAAFLLPQQIV*VLHLGHSKLEASLR Trigger: ACGGAGGCTTGCCTCAAGCTTGCTATGCCCGAGGTGCAGTACTCAAACTATCTGTTGAGGAAGCAAAAACGCCGCGGTGGTGTGCGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | GGGAATAAAAGGGCCCTAATGGAGCAAGACCTGAGTTCCTGGAGGCAGGCGGATCATCATCTTGGTGGATaGCTGCAAGCGCTGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: GNKRALMEQDLSSWRQADHHLGG*LQALED Trigger: ATCCTCCAGCGCTTGCAGCAATCCACCAAGATGATG...ATCCGCCTGCCTCCAGGAACTCAGGTCTTGCTCCATTAGGGCCCTTTTATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 90 bp | AGGCTTACGGTGCTGCACCCTAGCACCAACAGCAGAATTTTCCTGTaGCTCATCATCTTGGTGGATTGCTGCAAGCGCTGGAGGATAGGT | + |
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Preference number: 5 (lower is better) Translates to: RLTVLHPSTNSRIFL*LIILVDCCKRWRIG Trigger: ACCTATCCTCCAGCGCTTGCAGCAATCCACCAAGATGATGAGCCACAGGAAAATTCTGCTGTTGGTGCTAGGGTGCAGCACCGTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | AAAGCCCAGGTGCTGACTGGAAGTACAGCATTTTCCCAGGACTTAGTCCCTCTCCTGTGGCTCATCATCTaGGTGGATTGCTGCAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: KAQVLTGSTAFSQDLVPLLWLII*VDCCKR Trigger: GCGCTTGCAGCAATCCACCAAGATGATGAGCCACAG...GAGAGGGACTAAGTCCTGGGAAAATGCTGTACTTCCAGTCAGCACCTGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATCCCATGATGTCCACTTaGCGGCTAGGCTGCCACGGC | + |
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Preference number: 5 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNPMMST*RLGCHG Trigger: GCCGTGGCAGCCTAGCCGCAAAGTGGACATCATGGG...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATACGGCTGCAGCTGCTTaGTACGAATCTGGGCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNTAAAA*YESGQR Trigger: CCGCTGCCCAGATTCGTACAAAGCAGCTGCAGCCGT...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS-3UTR CAA 90 bp | GAAGAAGAAGAAGTAGTAGTAGTAGTCAAACAACAAAAAGCCCAACCGAAGAATCTCAGAGGGAACAACTaGGGGTACCAACTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EEEEVVVVVKQQKAQPKNLRGNN*GYQLSC Trigger: GCAGCTCAGTTGGTACCCCAAGTTGTTCCCTCTGAG...ATTCTTCGGTTGGGCTTTTTGTTGTTTGACTACTACTACTACTTCTTCTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS TCA 72 bp | GGCCCGCGCGCGCCACGCGACGCCAGAAGGTGGCGTTaGAATGGTCGTAGAGGCCCGCATCGAGCGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPRAPRDARRWR*NGRRGPHRARS Trigger: GGAACGCGCTCGATGCGGGCCTCTACGACCATTTCAACGCCACCTTCTGGCGTCGCGTGGCGCGCGCGGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CAA 72 bp | GCCTCGGGTGCGCGCAGGAAAGTCTCGAGCGACGCATaGGGCACGCGCCTGAAGGCCGGGCAGTACTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASGARRKVSSDA*GTRLKAGQYWL Trigger: CAACCAGTACTGCCCGGCCTTCAGGCGCGTGCCCAATGCGTCGCTCGAGACTTTCCTGCGCGCACCCGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 72 bp | GGCGAAGTGCTCGCCTGGACGGTAGTAGGCCTCGGGTaGGCGCAGGAAAGTCTCGAGCGACGCATTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: GEVLAWTVVGLG*AQESLERRIGH Trigger: GTGCCCAATGCGTCGCTCGAGACTTTCCTGCGCGCACCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | ATGAGGCGCTCGAGTTCTGCACGGTCGAAGCGCAGATaGCTGGCCAGCATGTGCGGGGGCCTCGTAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: MRRSSSARSKRR*LASMCGGLVAG Trigger: CCCAGCTACGAGGCCCCCGCACATGCTGGCCAGCCATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | CTTCAGGAAGGCCACGGCCATGTGCTTGGCCCGAGGTaGCGATTCTCGCAGAGGCGGGCAGCTCAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQEGHGHVLGPR*RFSQRRAAQRE Trigger: TTCCCTCTGAGCTGCCCGCCTCTGCGAGAATCGCCACCTCGGGCCAAGCACATGGCCGTGGCCTTCCTGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | CAGATGGCTGGCCAGCATGTGCGGGGGCCTCGTAGCTaGGTGCACGAAGTGGGCCGAGAAGTTTCGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: QMAGQHVRGPRS*VHEVGREVSRV Trigger: TACCCGCGAAACTTCTCGGCCCACTTCGTGCACCCAGCTACGAGGCCCCCGCACATGCTGGCCAGCCATCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | TCTTGTGAGTCTTCAGGAAGGCCACGGCCATGTGCTTaGCCCGAGGTGGCGATTCTCGCAGAGGCGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SCESSGRPRPCA*PEVAILAEAGS Trigger: GCTGCCCGCCTCTGCGAGAATCGCCACCTCGGGCCAAGCACATGGCCGTGGCCTTCCTGAAGACTCACAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CAA 90 bp | CGAGGTGGCGATTCTCGCAGAGGCGGGCAGCTCAGAGGGAACAACTaGGGGTACCAACTGAGCTGCGACCCCTGGTGGATGAGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RGGDSRRGGQLRGNN*GYQLSCDPWWMRRL Trigger: AAGCCTCCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTTCCCTCTGAGCTGCCCGCCTCTGCGAGAATCGCCACCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 72 bp | AGGGTGAGGCAGGGCCACCGTGAGGTTGTGGCGTTCTaGGAAGCGGAACAGGATGTTCTGCACCGTAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: RVRQGHREVVAF*EAEQDVLHRST Trigger: GGTACTACGGTGCAGAACATCCTGTTCCGCTTCGCAGAACGCCACAACCTCACGGTGGCCCTGCCTCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | GGGAACAACTTGGGGTACCAACTGAGCTGCGACCCCTaGTGGATGAGGAGGCTTACGGTGCTGCACCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GNNLGYQLSCDP*WMRRLTVLHPS Trigger: GCTAGGGTGCAGCACCGTAAGCCTCCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | CAGCGTGTTGTGAGCAAACATGGCGAAGTGCTCGCCTaGACGGTAGTAGGCCTCGGGTGCGCGCAGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QRVVSKHGEVLA*TVVGLGCAQES Trigger: ACTTTCCTGCGCGCACCCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCCATGTTTGCTCACAACACGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | CTCCAAGGTCGTAGGCCAGCGTGTTGTGAGCAAACATaGCGAAGTGCTCGCCTGGACGGTAGTAGGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGRRPACCEQT*RSARLDGSRPR Trigger: CCGAGGCCTACTACCGTCCAGGCGAGCACTTCGCCATGTTTGCTCACAACACGCTGGCCTACGACCTTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | GCCGAGGGGGAGGATTATCCAGGACAGATTCTGGCCTaGACCGCACACCACCGCGGCGTTTTTGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AEGEDYPGQILA*TAHHRGVFASS Trigger: TGAGGAAGCAAAAACGCCGCGGTGGTGTGCGGTCCAGGCCAGAATCTGTCCTGGATAATCCTCCCCCTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CAA 72 bp | GATTCTCGCAGAGGCGGGCAGCTCAGAGGGAACAACTaGGGGTACCAACTGAGCTGCGACCCCTGGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DSRRGGQLRGNN*GYQLSCDPWWM Trigger: CATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTTCCCTCTGAGCTGCCCGCCTCTGCGAGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS GCA 72 bp | ATAGATCGTGTCTGGAGGCATGAGGCGCTCGAGTTCTaGACGGTCGAAGCGCAGATGGCTGGCCAGCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: IDRVWRHEALEF*TVEAQMAGQHV Trigger: CACATGCTGGCCAGCCATCTGCGCTTCGACCGTGCAGAACTCGAGCGCCTCATGCCTCCAGACACGATCTAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS CCA 72 bp | AACAACTTGGGGTACCAACTGAGCTGCGACCCCTGGTaGATGAGGAGGCTTACGGTGCTGCACCCTAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: NNLGYQLSCDPW*MRRLTVLHPST Trigger: GGTGCTAGGGTGCAGCACCGTAAGCCTCCTCATCCACCAGGGGTCGCAGCTCAGTTGGTACCCCAAGTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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| CDS TCA 72 bp | ACCACCGCGGCGTTTTTGCTTCCTCAACAGATAGTTTaGGTACTGCACCTCGGGCATAGCAAGCTTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTAAFLLPQQIV*VLHLGHSKLEA Trigger: TGCCTCAAGCTTGCTATGCCCGAGGTGCAGTACTCAAACTATCTGTTGAGGAAGCAAAAACGCCGCGGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061169.7 |
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