Pregenerated sensors for GAL3ST2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093805Ensembl transcript IDs: ENSMUST00000177958.2, ENSMUST00000178757.8
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGAGATTATACACAACATGGTTTCCAAGGCAACCAAAGGTACCTaGGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACTTTCTCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: PEIIHNMVSKATKGT*ASQRTCGKSGTFSF Trigger: GAAGGAGAAAGTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTGGAAACCATGTTGTGTATAATCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACGTTCTAGGTCTCTTCTaGGATCCACAGGCCCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: QGNQRYLSLSENLWQVRHVLGLF*DPQARC Trigger: ACATCGGGCCTGTGGATCCAAGAAGAGACCTAGAAC...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| 3UTR CCA 72 bp | GGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTaGCAAGTCAGGCACTTTCTCCTTCAGGACTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GNQRYLSLSENL*QVRHFLLQDCS Trigger: TGAACAGTCCTGAAGGAGAAAGTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| 3UTR CCA 72 bp | ATTGATGTCCATATTAAATTGAGGTACAAAGGAGCATaGTCTCTCTTTTCTGAGACATCTGACACAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IDVHIKLRYKGA*SLFSETSDTEE Trigger: TTCTTCTGTGTCAGATGTCTCAGAAAAGAGAGACCATGCTCCTTTGTACCTCAATTTAATATGGACATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACAGCGCACACCAGTGCTaGACACGCTCCTGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHSAHQC*TRSWLS Trigger: TGAGAGCCAGGAGCGTGTCCAGCACTGGTGTGCGCT...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACGACCAGGAACCAGAGTaGCACCTGGAAGGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHDQEPE*HLEGPV Trigger: CACAGGTCCTTCCAGGTGGCACTCTGGTTCCTGGTC...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACTGGGAGACAGTGCTCTaGCTGCGCACGTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHWETVL*LRTFSL Trigger: CAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCCCA...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACACCTCTTCTGTGAGCTaGCGTGGGCTTAGCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHTSSVS*RGLSSA Trigger: TGCGGAGCTAAGCCCACGCCAGCTCACAGAAGAGGT...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCCTCGGGCAGTGCTGTaGATAGGTTGTGAGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHPRAVL*IGCETL Trigger: CAGAGTCTCACAACCTATCCACAGCACTGCCCGAGG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACATTCGTCCAGGCTCTTaGCTCTCTGGAAGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHIRPGS*LSGRQV Trigger: CACCTGCCTTCCAGAGAGCCAAGAGCCTGGACGAAT...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCAGGTTCTTGGGCTCTaGATCCTGAAGACACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHQVLGL*ILKTQG Trigger: GCCCTGTGTCTTCAGGATCCAGAGCCCAAGAACCTG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCACATGATGTTAAAGTaGTGCTGCAGGTGGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHHMMLK*CCRWAS Trigger: GGACGCCCACCTGCAGCATCACTTTAACATCATGTG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCTGGGTTCCGGAGGATaGAGAAGTAGAAAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHLGSGG*RSRKCP Trigger: GGGACACTTTCTACTTCTCCATCCTCCGGAACCCAG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCTCCAGCTGGAAAACTaGGTTCCGGAGGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHLQLEN*VPEDGE Trigger: TTCTCCATCCTCCGGAACCCAGTTTTCCAGCTGGAG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACTGCAGAGAGTACATATaGGCCATGTGCTGGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHCREYI*AMCWSS Trigger: CGAGCTCCAGCACATGGCCCATATGTACTCTCTGCA...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACCTGCTGGCTGTCTTGTaGGTCTTGAGGAACATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHLLAVL*VLRNMM Trigger: CATCATGTTCCTCAAGACTCACAAGACAGCCAGCAG...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACTGTAGCCCAGAATATTaGCCTTCCCACCCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGNQRYLSLSENLWQVRHCSPEY*PSHPGK Trigger: CTTACCAGGGTGGGAAGGCCAATATTCTGGGCTACA...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS CCA 90 bp | AGCTCGCGCTGCCTCTCCCGCAGCTGCTCCACCTCTTCTGTGAGCTaGCGTGGGCTTAGCTCCGCATGCAGCTGGGTCCAAAACGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLSRSCSTSSVS*RGLSSACSWVQNVR Trigger: TCGCACGTTTTGGACCCAGCTGCATGCGGAGCTAAGCCCACGCCAGCTCACAGAAGAGGTGGAGCAGCTGCGGGAGAGGCAGCGCGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS TCA 90 bp | CAGGCGTCAGGTGGGAGACAGTGCTCTGGCTGCGCACGTTCAGCTTaGAGGACACGACGTCATCTAGCTGCCAGCGCAGCCTTCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QASGGRQCSGCARSA*RTRRHLAASAAFCA Trigger: TGCGCAGAAGGCTGCGCTGGCAGCTAGATGACGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCCCACCTGACGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS TCA 90 bp | AGATTCTGGTCATCTATGTGTGTCAGGTTCTTGGGCTCTGGATCCTaGAGACACAGGGCCATGAGCTCGCGCTGCCTCTCCCGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFWSSMCVRFLGSGS*RHRAMSSRCLSRSC Trigger: GCAGCTGCGGGAGAGGCAGCGCGAGCTCATGGCCCTGTGTCTTCAGGATCCAGAGCCCAAGAACCTGACACACATAGATGACCAGAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACAATTCGTCCAGGCTCTaGGCTCTCTGGAAGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGNQRYLSLSENLWQVRHNSSRL*ALWKAG Trigger: ACCTGCCTTCCAGAGAGCCAAGAGCCTGGACGAATT...GTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178757.8 |
||
| CDS GCA 90 bp | GACATTTTTCAGGCTCACACTAGCGTTGTAGTACTTCCACGGATCTaGCAGGAATTCGTCCAGGCTCTTGGCTCTCTGGAAGGCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DIFQAHTSVVVLPRI*QEFVQALGSLEGRC Trigger: GCACCTGCCTTCCAGAGAGCCAAGAGCCTGGACGAATTCCTGGCAGATCCGTGGAAGTACTACAACGCTAGTGTGAGCCTGAAAAATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 90 bp | TGCATAGTCCTTATAGTAGATGAAGGAGGACTCCAGCTGGAAAACTaGGTTCCGGAGGATGGAGAAGTAGAAAGTGTCCCTGGGCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIVLIVDEGGLQLEN*VPEDGEVESVPGHD Trigger: GTCATGCCCAGGGACACTTTCTACTTCTCCATCCTCCGGAACCCAGTTTTCCAGCTGGAGTCCTCCTTCATCTACTATAAGGACTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 72 bp | TGCCAGTCCAGCGCACACCAGTGCTGGACACGCTCCTaGCTCTCAGGCGTCAGGTGGGAGACAGTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CQSSAHQCWTRS*LSGVRWETVLW Trigger: CCAGAGCACTGTCTCCCACCTGACGCCTGAGAGCCAGGAGCGTGTCCAGCACTGGTGTGCGCTGGACTGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 72 bp | TGCCTCTCCCGCAGCTGCTCCACCTCTTCTGTGAGCTaGCGTGGGCTTAGCTCCGCATGCAGCTGGGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLSRSCSTSSVS*RGLSSACSWVQ Trigger: TTGGACCCAGCTGCATGCGGAGCTAAGCCCACGCCAGCTCACAGAAGAGGTGGAGCAGCTGCGGGAGAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CAA 90 bp | TCAGGCGTCAGGTGGGAGACAGTGCTCTGGCTGCGCACGTTCAGCTaGAAGGACACGACGTCATCTAGCTGCCAGCGCAGCCTTCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVRWETVLWLRTFS*KDTTSSSCQRSLLR Trigger: GCGCAGAAGGCTGCGCTGGCAGCTAGATGACGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCCCACCTGACGCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 72 bp | TCCTGGCTCTCAGGCGTCAGGTGGGAGACAGTGCTCTaGCTGCGCACGTTCAGCTTGAAGGACACGACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SWLSGVRWETVL*LRTFSLKDTTS Trigger: TGACGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCCCACCTGACGCCTGAGAGCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS GCA 72 bp | CGCACGTTCAGCTTGAAGGACACGACGTCATCTAGCTaGCAGCGCAGCCTTCTGCGCAGCAGCACCATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RTFSLKDTTSSS*QRSLLRSSTID Trigger: GTCTATGGTGCTGCTGCGCAGAAGGCTGCGCTGGCAGCTAGATGACGTCGTGTCCTTCAAGCTGAACGTGCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS GCA 72 bp | CCAGATGGAATCGCTGCTCCACCTCCGCAAGGCGCTTaGGAACATAGTCCATGTCTGCTGGGGCGTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PDGIAAPPPQGA*EHSPCLLGRCC Trigger: ACAACAACGCCCCAGCAGACATGGACTATGTTCGCAAGCGCCTTGCGGAGGTGGAGCAGCGATTCCATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS GCA 72 bp | CAGGCTCACACTAGCGTTGTAGTACTTCCACGGATCTaGCAGGAATTCGTCCAGGCTCTTGGCTCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QAHTSVVVLPRI*QEFVQALGSLE Trigger: TTCCAGAGAGCCAAGAGCCTGGACGAATTCCTGGCAGATCCGTGGAAGTACTACAACGCTAGTGTGAGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 72 bp | ATTCTGGTCATCTATGTGTGTCAGGTTCTTGGGCTCTaGATCCTGAAGACACAGGGCCATGAGCTCGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILVIYVCQVLGL*ILKTQGHELAL Trigger: CAGCGCGAGCTCATGGCCCTGTGTCTTCAGGATCCAGAGCCCAAGAACCTGACACACATAGATGACCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS GCA 72 bp | TGGACCTTGTCCGGTATAAGTAGTCTGAAGTCCACATaGAGGAAACCAACCAGGAGGAACACAGCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: WTLSGISSLKST*RKPTRRNTART Trigger: GGTCCTGGCTGTGTTCCTCCTGGTTGGTTTCCTGCATGTGGACTTCAGACTACTTATACCGGACAAGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CCA 72 bp | CTCCGCAAGGCGCTTGCGAACATAGTCCATGTCTGCTaGGGCGTTGTTGTCAAAACCAAAATCAAACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LRKALANIVHVC*GVVVKTKIKPH Trigger: ATGTGGTTTGATTTTGGTTTTGACAACAACGCCCCAGCAGACATGGACTATGTTCGCAAGCGCCTTGCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||
| CDS CAA 72 bp | AGGAACATGATGTTTGTGACCGGTGGTTCCTGGACCTaGTCCGGTATAAGTAGTCTGAAGTCCACATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNMMFVTGGSWT*SGISSLKSTCR Trigger: CCTGCATGTGGACTTCAGACTACTTATACCGGACAAGGTCCAGGAACCACCGGTCACAAACATCATGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177958.2 ENSMUST00000178757.8 |
||