Pregenerated sensors for GAL3ST2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094651Ensembl transcript IDs: ENSMUST00000094663.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATGTGACAGTGACTTCTTTTCCCAACACCTCAGGCACCCTGTTTaGGTAACCCAGGGAATCAGGTACCTCATCCTGAGAGCTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: VCDSDFFSQHLRHPV*VTQGIRYLILRAGC Trigger: GCACCCAGCTCTCAGGATGAGGTACCTGATTCCCTGGGTTACTCAAACAGGGTGCCTGAGGTGTTGGGAAAAGAAGTCACTGTCACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 90 bp | CCTGAGATTATACACAACATGGTTTCCAAGACAACCAAAGGTACCTaGGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACTTTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PEIIHNMVSKTTKGT*ASQRTCGKSGTFSF Trigger: GAAGGAGAAAGTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGTCTTGGAAACCATGTTGTGTATAATCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR GCA 90 bp | TATGTCTGTGCTCAGGCTAACCAACAACGTTCACAATTCTCAGTCTaGACTGATCTTCGTAAAATGGAAGGCTGCCTACTCATCCCGTCT | + |
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Preference number: 1 (lower is better) Translates to: YVCAQANQQRSQFSV*TDLRKMEGCLLIPS Trigger: AGACGGGATGAGTAGGCAGCCTTCCATTTTACGAAGATCAGTGCAGACTGAGAATTGTGAACGTTGTTGGTTAGCCTGAGCACAGACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 90 bp | TCAGTTTGGGAGAGTCAATTCTCAATTTACAGTGTTCTTTTGGATTaGCAAACTCATTGTACCATTGTACCATCTCTAAACTCACCAACA | + |
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Preference number: 1 (lower is better) Translates to: SVWESQFSIYSVLLD*QTHCTIVPSLNSPT Trigger: TGTTGGTGAGTTTAGAGATGGTACAATGGTACAATGAGTTTGTCAATCCAAAAGAACACTGTAAATTGAGAATTGACTCTCCCAAACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGGCAAGTCAGGCACTTTCTCCTTCAGGACTGTTCAACAGGAAGCTAAAGCCCCGGTGTTCCCCTaGGCTGATGTTCACCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TCGKSGTFSFRTVQQEAKAPVFP*ADVHLV Trigger: CACCAGGTGAACATCAGCCCAGGGGAACACCGGGGC...TTTAGCTTCCTGTTGAACAGTCCTGAAGGAGAAAGTGCCTGACTTGCCACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGTGTATGTGACAGTGACTTCTTTTCCCAACACCTCAGGCACCCTGTTTTCCCTGGCCTACCTCTaGGCCTCCGAACCCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: KAVYVTVTSFPNTSGTLFSLAYL*ASEPCT Trigger: TGTACAGGGTTCGGAGGCTCAGAGGTAGGCCAGGGA...AAACAGGGTGCCTGAGGTGTTGGGAAAAGAAGTCACTGTCACATACACAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCACCAGGCCAGGATCTCCTTTCATCTGGATAGTGTCAGGAGAACTGGTTCAGGTAGTGGCATCTTaGAGGAAACAGAGGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPTRPGSPFIWIVSGELVQVVAS*RKQRWQ Trigger: CTGCCACCTCTGTTTCCTCCAAGATGCCACTACCTG...AACCAGTTCTCCTGACACTATCCAGATGAAAGGAGATCCTGGCCTGGTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCACCAGGCCAGGATCTCCTTTCATCTGGATAGTGTCAGGAGAACTGGTTAGATTATACACAACATaGTTTCCAAGACAACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SPTRPGSPFIWIVSGELVRLYTT*FPRQPK Trigger: CTTTGGTTGTCTTGGAAACCATGTTGTGTATAATCT...AACCAGTTCTCCTGACACTATCCAGATGAAAGGAGATCCTGGCCTGGTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGCAGGTAGTGGCATCTTGGAGGAAACAGAGGTGGCAGAACAATAGACCTTACCTCTGTTCAGTTTaGGAGAGTCAATTCTCAATT | + |
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Preference number: 2 (lower is better) Translates to: SQQVVASWRKQRWQNNRPYLCSV*ESQFSI Trigger: AATTGAGAATTGACTCTCCCAAACTGAACAGAGGTA...AGGTCTATTGTTCTGCCACCTCTGTTTCCTCCAAGATGCCACTACCTGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR-3UTR GCA 90 bp | ATGACTAAGAGAGGCACCCAAAAGATGATCCCTGAGATTATACACAACATGGTTTCACAATTCTCAGTCTaGACTGATCTTCGTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: MTKRGTQKMIPEIIHNMVSQFSV*TDLRKM Trigger: CATTTTACGAAGATCAGTGCAGACTGAGAATTGTGA...AACCATGTTGTGTATAATCTCAGGGATCATCTTTTGGGTGCCTCTCTTAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 72 bp | GCTGCCTACTCATCCCGTCTCTCCCTGGCCTACCTCTaGGCCTCCGAACCCTGTACAAGCATGGCATTGTCA | + |
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Preference number: 3 (lower is better) Translates to: AAYSSRLSLAYL*ASEPCTSMALS Trigger: TGACAATGCCATGCTTGTACAGGGTTCGGAGGCTCAGAGGTAGGCCAGGGAGAGACGGGATGAGTAGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | ATCAGGAGACTCCACCCTAGGTGGTCTTGTTCACAGTaGCAGAACAGGTCTGAGCCAGCCTGCTCAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: IRRLHPRWSCSQ*QNRSEPACSRL Trigger: CAGCCTTGAGCAGGCTGGCTCAGACCTGTTCTGCCACTGTGAACAAGACCACCTAGGGTGGAGTCTCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | ATCCCATCCCCCACCAGGCCAGGATCTCCTTTCATCTaGATAGTGTCAGGAGAACTGGTTCAGCCTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: IPSPTRPGSPFI*IVSGELVQPLS Trigger: GCTGAGAGGCTGAACCAGTTCTCCTGACACTATCCAGATGAAAGGAGATCCTGGCCTGGTGGGGGATGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | CGTGTTGTCTTAGGTGGAAGGCCCTCTCCCCAGAGATaGAGACGGATGGGCATCTTCACAGTTTCACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: RVVLGGRPSPQR*RRMGIFTVSLW Trigger: CCAAAGTGAAACTGTGAAGATGCCCATCCGTCTCCATCTCTGGGGAGAGGGCCTTCCACCTAAGACAACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 72 bp | CCGAACCCTGTACAAGCATGGCATTGTCACCGGTGCTaGACCAATGTGGCTACAAAATCCCAGGGAACCGTT | + |
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Preference number: 3 (lower is better) Translates to: PNPVQAWHCHRC*TNVATKSQGTV Trigger: AACGGTTCCCTGGGATTTTGTAGCCACATTGGTTCAGCACCGGTGACAATGCCATGCTTGTACAGGGTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | AGATGGAGACGGATGGGCATCTTCACAGTTTCACTTTaGAAAGGTAGGCTGGGAAGAGAGGGTCACTTAGCC | + |
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Preference number: 3 (lower is better) Translates to: RWRRMGIFTVSL*KGRLGREGHLA Trigger: GGCTAAGTGACCCTCTCTTCCCAGCCTACCTTTCCAAAGTGAAACTGTGAAGATGCCCATCCGTCTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | GGGCACAAGCATTCTTGCCTGTCCATGTCTCTACAGTaGGTGGATTCAGATATGGAACAGCTGTGCGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: GHKHSCLSMSLQ*VDSDMEQLCVL Trigger: CAACACGCACAGCTGTTCCATATCTGAATCCACCCACTGTAGAGACATGGACAGGCAAGAATGCTTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | GTTCACAATTCTCAGTCTGCACTGATCTTCGTAAAATaGAAGGCTGCCTACTCATCCCGTCTCTCCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: VHNSQSALIFVK*KAAYSSRLSLA Trigger: GGCCAGGGAGAGACGGGATGAGTAGGCAGCCTTCCATTTTACGAAGATCAGTGCAGACTGAGAATTGTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | GACAACCAAAGGTACCTGAGCCTCTCAGAGAACCTGTaGCAAGTCAGGCACTTTCTCCTTCAGGACTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: DNQRYLSLSENL*QVRHFLLQDCS Trigger: TGAACAGTCCTGAAGGAGAAAGTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 72 bp | AGTGACTTCTTTTCCCAACACCTCAGGCACCCTGTTTaGGTAACCCAGGGAATCAGGTACCTCATCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SDFFSQHLRHPV*VTQGIRYLILR Trigger: TCTCAGGATGAGGTACCTGATTCCCTGGGTTACTCAAACAGGGTGCCTGAGGTGTTGGGAAAAGAAGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 72 bp | ATACACAACATGGTTTCCAAGACAACCAAAGGTACCTaGGCCTCTCAGAGAACCTGTGGCAAGTCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: IHNMVSKTTKGT*ASQRTCGKSGT Trigger: AGTGCCTGACTTGCCACAGGTTCTCTGAGAGGCTCAGGTACCTTTGGTTGTCTTGGAAACCATGTTGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR GCA 72 bp | GCTCAGGCTAACCAACAACGTTCACAATTCTCAGTCTaGACTGATCTTCGTAAAATGGAAGGCTGCCTACTC | + |
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Preference number: 3 (lower is better) Translates to: AQANQQRSQFSV*TDLRKMEGCLL Trigger: GAGTAGGCAGCCTTCCATTTTACGAAGATCAGTGCAGACTGAGAATTGTGAACGTTGTTGGTTAGCCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CCA 72 bp | ACAAGCATTCTTGCCTGTCCATGTCTCTACAGTGGGTaGATTCAGATATGGAACAGCTGTGCGTGTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: TSILACPCLYSG*IQIWNSCACCL Trigger: AAGACAACACGCACAGCTGTTCCATATCTGAATCCACCCACTGTAGAGACATGGACAGGCAAGAATGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR TCA 72 bp | GAGAGTCAATTCTCAATTTACAGTGTTCTTTTGGATTaGCAAACTCATTGTACCATTGTACCATCTCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: ESQFSIYSVLLD*QTHCTIVPSLN Trigger: GTTTAGAGATGGTACAATGGTACAATGAGTTTGTCAATCCAAAAGAACACTGTAAATTGAGAATTGACTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS-3UTR GCA 90 bp | GGCTGCCTACTCATCCCGTCTCTCCCTGGCCTACCTCTGAGCCTCCGAACCCTGTGCAGGTGGGCGTCCTaGTTCAGGCCCTCCACATAC | + |
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Preference number: 4 (lower is better) Translates to: GCLLIPSLPGLPLSLRTLCRWAS*FRPSTY Trigger: GTATGTGGAGGGCCTGAAGCAGGACGCCCACCTGCA...CAGGGTTCGGAGGCTCAGAGGTAGGCCAGGGAGAGACGGGATGAGTAGGCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS-3UTR GCA 90 bp | AGGCCCGATGTCTATGCCCCGGTGTTCCCCTGGGCTGATGTTCACCTGGTGGGCCTGCTGGCTGTCTTGTaGGTCTTGAGGAACATGATG | + |
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Preference number: 4 (lower is better) Translates to: RPDVYAPVFPWADVHLVGLLAVL*VLRNMM Trigger: CATCATGTTCCTCAAGACGCACAAGACAGCCAGCAG...GCCCACCAGGTGAACATCAGCCCAGGGGAACACCGGGGCATAGACATCGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CAA 72 bp | GCTACAAAATCCCAGGGAACCGTTCTAGGTCTCTTCTaGGATCCACAGGCCCGATGTCTATGCCCCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: ATKSQGTVLGLF*DPQARCLCPGV Trigger: AACACCGGGGCATAGACATCGGGCCTGTGGATCCAAGAAGAGACCTAGAACGGTTCCCTGGGATTTTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS-3UTR GCA 90 bp | TCTCAGCAGGTAGTGGCATCTTGGAGGAAACAGAGGTGGCAGAACAATAGACCTCCTCCGCAAGGCGCTTaGGAACATAGTCCATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SQQVVASWRKQRWQNNRPPPQGA*EHSPCL Trigger: CAGACATGGACTATGTTCGCAAGCGCCTTGCGGAGG...AGGTCTATTGTTCTGCCACCTCTGTTTCCTCCAAGATGCCACTACCTGCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS-3UTR CCA 90 bp | TCTCAGCAGGTAGTGGCATCTTGGAGGAAACAGAGGTGGCAGAACAATAGACCTTGTGAGACAGTGCTCTaGCTGCGCACGTTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SQQVVASWRKQRWQNNRPCETVL*LRTFSL Trigger: CAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACA...AGGTCTATTGTTCTGCCACCTCTGTTTCCTCCAAGATGCCACTACCTGCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CAA 72 bp | CTCAATTTACAGTGTTCTTTTGGATTGACAAACTCATaGTACCATTGTACCATCTCTAAACTCACCAACAAT | + |
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Preference number: 4 (lower is better) Translates to: LNLQCSFGLTNS*YHCTISKLTNN Trigger: ATTGTTGGTGAGTTTAGAGATGGTACAATGGTACAATGAGTTTGTCAATCCAAAAGAACACTGTAAATTGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| 3UTR CAA 72 bp | GGAGAGTCAATTCTCAATTTACAGTGTTCTTTTGGATaGACAAACTCATTGTACCATTGTACCATCTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: GESILNLQCSFG*TNSLYHCTISK Trigger: TTTAGAGATGGTACAATGGTACAATGAGTTTGTCAATCCAAAAGAACACTGTAAATTGAGAATTGACTCTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 90 bp | CAGGCGTCAGGTGTGAGACAGTGCTCTGGCTGCGCACGTTCAGCTTaGAGGACACGACATCATCCAGCTGCCAGCGCAGCCTTCTGCGCA | + |
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Preference number: 5 (lower is better) Translates to: QASGVRQCSGCARSA*RTRHHPAASAAFCA Trigger: TGCGCAGAAGGCTGCGCTGGCAGCTGGATGATGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACACCTGACGCCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 90 bp | GGCGTGGGCTTAGCTCCGCATGCAGCTGGGTCCAAAACGTGCGATTaGAATGCTGGTAGAGCTGCCAGTCCAGCGCACACCAGTGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: GVGLAPHAAGSKTCD*NAGRAASPAHTSAG Trigger: TCCGGCACTGGTGTGCGCTGGACTGGCAGCTCTACCAGCATTTCAATCGCACGTTTTGGACCCAGCTGCATGCGGAGCTAAGCCCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CCA 90 bp | CGGACACGCTCCTGGCTCTCAGGCGTCAGGTGTGAGACAGTGCTCTaGCTGCGCACGTTCAGCTTGAAGGACACGACATCATCCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RTRSWLSGVRCETVL*LRTFSLKDTTSSSC Trigger: GCAGCTGGATGATGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACACCTGACGCCTGAGAGCCAGGAGCGTGTCCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 72 bp | CGCGCTGCCTCTCCCGCAGCTGCTCCACCTCTTCTGTaGGCTGGCGTGGGCTTAGCTCCGCATGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RAASPAAAPPLL*AGVGLAPHAAG Trigger: CCCAGCTGCATGCGGAGCTAAGCCCACGCCAGCTCACAGAAGAGGTGGAGCAGCTGCGGGAGAGGCAGCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CCA 72 bp | TGCCAGTCCAGCGCACACCAGTGCCGGACACGCTCCTaGCTCTCAGGCGTCAGGTGTGAGACAGTGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CQSSAHQCRTRS*LSGVRCETVLW Trigger: CCAGAGCACTGTCTCACACCTGACGCCTGAGAGCCAGGAGCGTGTCCGGCACTGGTGTGCGCTGGACTGGCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 72 bp | GGTTCTTGGGCTCTGGATCCTGAAGACACAGGGCCATaGGCTCGCGCTGCCTCTCCCGCAGCTGCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: GSWALDPEDTGP*ARAASPAAAPP Trigger: AGGTGGAGCAGCTGCGGGAGAGGCAGCGCGAGCTCATGGCCCTGTGTCTTCAGGATCCAGAGCCCAAGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CAA 90 bp | TCAGGCGTCAGGTGTGAGACAGTGCTCTGGCTGCGCACGTTCAGCTaGAAGGACACGACATCATCCAGCTGCCAGCGCAGCCTTCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SGVRCETVLWLRTFS*KDTTSSSCQRSLLR Trigger: GCGCAGAAGGCTGCGCTGGCAGCTGGATGATGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACACCTGACGCCTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 72 bp | GGTGTGAGACAGTGCTCTGGCTGCGCACGTTCAGCTTaGAGGACACGACATCATCCAGCTGCCAGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVRQCSGCARSA*RTRHHPAASAA Trigger: GGCTGCGCTGGCAGCTGGATGATGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CCA 72 bp | TCCTGGCTCTCAGGCGTCAGGTGTGAGACAGTGCTCTaGCTGCGCACGTTCAGCTTGAAGGACACGACATCA | + |
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Preference number: 6 (lower is better) Translates to: SWLSGVRCETVL*LRTFSLKDTTS Trigger: TGATGTCGTGTCCTTCAAGCTGAACGTGCGCAGCCAGAGCACTGTCTCACACCTGACGCCTGAGAGCCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 72 bp | TTAGCTCCGCATGCAGCTGGGTCCAAAACGTGCGATTaGAATGCTGGTAGAGCTGCCAGTCCAGCGCACACC | + |
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Preference number: 6 (lower is better) Translates to: LAPHAAGSKTCD*NAGRAASPAHT Trigger: GGTGTGCGCTGGACTGGCAGCTCTACCAGCATTTCAATCGCACGTTTTGGACCCAGCTGCATGCGGAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS TCA 72 bp | TCATCTATGTGTGTCAGGTTCTTGGGCTCTGGATCCTaGAGACACAGGGCCATGAGCTCGCGCTGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSMCVRFLGSGS*RHRAMSSRCLS Trigger: GGAGAGGCAGCGCGAGCTCATGGCCCTGTGTCTTCAGGATCCAGAGCCCAAGAACCTGACACACATAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS GCA 72 bp | TGGACCTTGTCCGGTTTAAGTAGTCTGAAGTCCACATaGAGGAAACCAACCAGGAGGAACACAGCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: WTLSGLSSLKST*RKPTRRNTART Trigger: GGTCCTGGCTGTGTTCCTCCTGGTTGGTTTCCTGCATGTGGACTTCAGACTACTTAAACCGGACAAGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CAA 90 bp | TGCGTCTTGAGGAACATGATGTTTGTGACCGGTGGTTCCTGGACCTaGTCCGGTTTAAGTAGTCTGAAGTCCACATGCAGGAAACCAACC | + |
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Preference number: 6 (lower is better) Translates to: CVLRNMMFVTGGSWT*SGLSSLKSTCRKPT Trigger: GGTTGGTTTCCTGCATGTGGACTTCAGACTACTTAAACCGGACAAGGTCCAGGAACCACCGGTCACAAACATCATGTTCCTCAAGACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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| CDS CAA 72 bp | AGGAACATGATGTTTGTGACCGGTGGTTCCTGGACCTaGTCCGGTTTAAGTAGTCTGAAGTCCACATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RNMMFVTGGSWT*SGLSSLKSTCR Trigger: CCTGCATGTGGACTTCAGACTACTTAAACCGGACAAGGTCCAGGAACCACCGGTCACAAACATCATGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094663.4 |
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