Pregenerated sensors for GAL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024907Ensembl transcript IDs: ENSMUST00000025842.8, ENSMUST00000237521.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATAACAGACGATTGGCTTaGGGAGTTGGCAGAAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: NTASKQRTDDWLEELAEDNRRLA*GVGRRF Trigger: GAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTT...ATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTTCTAACAGACGATTGGCTTaGGGAGTTGGCAGAAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: ASKQRTDDWLEELAEDSSNRRLA*GVGRRF Trigger: GAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTT...AGAAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATATTGGCTTGAGGAGTTaGCAGAAGATTCTTCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NTASKQRTDDWLEELAEDIGLRS*QKILLS Trigger: GCTAAGAAGAATCTTCTGCCAACTCCTCAAGCCAAT...ATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGCAGAGAACAGACGATTaGCTTGAGGAGTTGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LNHNTASKQRTDDWLEELQRTDD*LEELAE Trigger: TTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTG...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGATTGGCTTGAGGAGTTaGCAGAAGATTCTTCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LNHNTASKQRTDDWLEELIGLRS*QKILLS Trigger: GCTAAGAAGAATCTTCTGCCAACTCCTCAAGCCAAT...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTAGGTGGCCAAGGGGATaGCAGGCAGGCTGTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLQSREQTIGLRSWQKIRWPRG*QAGCRG Trigger: CCCTCGACAGCCTGCCTGGCATCCCCTTGGCCACCT...AATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTAGGTGGCCAAGGGGATaGCAGGCAGGCTGTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TASKQRTDDWLEELAEDSRWPRG*QAGCRG Trigger: CCCTCGACAGCCTGCCTGGCATCCCCTTGGCCACCT...AGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR TCA 90 bp | AACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATAAGTCCCAGAGTGGCTaGCAGGGTCACAACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NTASKQRTDDWLEELAEDKSQSG*QGHNQQ Trigger: CTGTTGGTTGTGACCCTGTCAGCCACTCTGGGACTT...ATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CCA 90 bp | CATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAATCCCAAGTCCCAGAGTaGCTGACAGGGTCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: HNTASKQRTDDWLEELAESQVPE*LTGSQP Trigger: TGGTTGTGACCCTGTCAGCCACTCTGGGACTTGGGA...TTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTTTCCCAAGTCCCAGAGTaGCTGACAGGGTCACAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QLQSREQTIGLRSWQKILSQVPE*LTGSQP Trigger: TGGTTGTGACCCTGTCAGCCACTCTGGGACTTGGGA...AAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CCA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGGTCTTCTGAGGAGGTaGCCAAGGGGATGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNHNTASKQRTDDWLEELGLLRR*PRGCQA Trigger: TGCCTGGCATCCCCTTGGCCACCTCCTCAGAAGACC...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR TCA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGAAGTCCCAGAGTGGCTaGCAGGGTCACAACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHNTASKQRTDDWLEELKSQSG*QGHNQQ Trigger: CTGTTGGTTGTGACCCTGTCAGCCACTCTGGGACTT...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTTCTTAGCCTAGAAACCTCTCTTCTCCTTTaGAGGCATCCCAAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REQTIGLRSWQKILLSLETSLLL*RHPKSQ Trigger: CTGGGACTTGGGATGCCTGCAAAGGAGAAGAGAGGT...TTCTAGGCTAAGAAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237521.2 |
||
| CDS-3UTR GCA 90 bp | TTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGACCTCTCTTCTCCTTTaGAGGCATCCCAAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIITQLQSREQTIGLRSWTSLLL*RHPKSQ Trigger: CTGGGACTTGGGATGCCTGCAAAGGAGAAGAGAGGT...CCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CCA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGCGTGCACAGTGGACATaGTCTCAGGACTTCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNHNTASKQRTDDWLEELRAQWT*SQDFSR Trigger: CCTAGAGAAGTCCTGAGACCATGTCCACTGTGCACG...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025842.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTTCGCTAAATGATCTGTaGTTGTCAATGGCATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLQSREQTIGLRSWQKISLNDL*LSMACG Trigger: CCCACATGCCATTGACAACCACAGATCATTTAGCGA...AATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTTCTTCGCTAAATGATCTGTaGTTGTCAATGGCATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKQRTDDWLEELAEDSSSLNDL*LSMACG Trigger: CCCACATGCCATTGACAACCACAGATCATTTAGCGA...AGAAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS CCA 90 bp | CACAGTGGACATGGTCTCAGGACTTCTCTAGGTCTTCTGAGGAGGTaGCCAAGGGGATGCCAGGCAGGCTGTCGAGGGCCCCGGCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HSGHGLRTSLGLLRR*PRGCQAGCRGPRPL Trigger: TAAAGGCCGGGGCCCTCGACAGCCTGCCTGGCATCCCCTTGGCCACCTCCTCAGAAGACCTAGAGAAGTCCTGAGACCATGTCCACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025842.8 |
||
| CDS GCA 90 bp | CCAAGGGGATGCCAGGCAGGCTGTCGAGGGCCCCGGCCTTTAAGGTaGAAGAAACTGAGAAACTCCATTATAGTGCGGACAATGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGCQAGCRGPRPLR*KKLRNSIIVRTMLL Trigger: GAGCAACATTGTCCGCACTATAATGGAGTTTCTCAGTTTCTTGCACCTTAAAGGCCGGGGCCCTCGACAGCCTGCCTGGCATCCCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025842.8 |
||
| CDS GCA 90 bp | AAGGGGATGCCAGGCAGGCTGTCGAGGGCCCCGGCCTCTTTAAGGTaGAAGAAACTGAGAAACTCCATTATAGTGCGGACAATGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGMPGRLSRAPASLR*KKLRNSIIVRTMLL Trigger: GAGCAACATTGTCCGCACTATAATGGAGTTTCTCAGTTTCTTGCACCTTAAAGAGGCCGGGGCCCTCGACAGCCTGCCTGGCATCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | ACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTATAGTGCGGACAATGTaGCTCTCAGGCAGGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TQLQSREQTIGLRSWQKIIVRTM*LSGRGT Trigger: TGTGCCCCTGCCTGAGAGCAACATTGTCCGCACTAT...AATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTAACCTCTCTTCTCCTTaGCAGGCATCCCAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TASKQRTDDWLEELAEDSNLSSP*QASQVP Trigger: TGGGACTTGGGATGCCTGCAAAGGAGAAGAGAGGTT...AGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATAACCTCTCTTCTCCTTaGCAGGCATCCCAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTASKQRTDDWLEELAEDNLSSP*QASQVP Trigger: TGGGACTTGGGATGCCTGCAAAGGAGAAGAGAGGTT...ATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | CATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAACTAAATGATCTGTGGTaGTCAATGGCATGTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HNTASKQRTDDWLEELAELNDLW*SMACGP Trigger: GGGCCCACATGCCATTGACAACCACAGATCATTTAG...TTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | CTTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGATAGTGCGGACAATGTaGCTCTCAGGCAGGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LNHNTASKQRTDDWLEELIVRTM*LSGRGT Trigger: TGTGCCCCTGCCTGAGAGCAACATTGTCCGCACTAT...CAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAACAGACGATTGGCTTGAGGAGTTGGCAGAAGATTCTTCTTAGCCTAGAACTAAATGATCTGTGGTaGTCAATGGCATGTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: REQTIGLRSWQKILLSLELNDLW*SMACGP Trigger: GGGCCCACATGCCATTGACAACCACAGATCATTTAG...TTCTAGGCTAAGAAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTGTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237521.2 |
||
| CDS-3UTR CAA 90 bp | TTAATCATAACACAGCTTCAAAGCAGAGAACAGACGATTGGCTTGAGGAGTTGGAGTTGTAACTCCCTCTaGCCTGTGAGGCCATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIITQLQSREQTIGLRSWSCNSL*PVRPCL Trigger: CAAGCATGGCCTCACAGGCAAGAGGGAGTTACAACT...CCAACTCCTCAAGCCAATCGTCTGTTCTCTGCTTTGAAGCTGTGTTATGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS CAA 72 bp | AGCCAGCGCTGTTCAGGGTCCAACCTCTCTTCTCCTTaGCAGGCATCCCAAGTCCCAGAGTGGCTGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQRCSGSNLSSP*QASQVPEWLTG Trigger: CCCTGTCAGCCACTCTGGGACTTGGGATGCCTGCAAAGGAGAAGAGAGGTTGGACCCTGAACAGCGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS GCA 72 bp | TGCCAGGCAGGCTGTCGAGGGCCCCGGCCTTTAAGGTaGAAGAAACTGAGAAACTCCATTATAGTGCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CQAGCRGPRPLR*KKLRNSIIVRT Trigger: TGTCCGCACTATAATGGAGTTTCTCAGTTTCTTGCACCTTAAAGGCCGGGGCCCTCGACAGCCTGCCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025842.8 |
||
| CDS CAA 90 bp | ACACTTCCTGGTCTCCTTTCCTCCACCTCCAGTTGTAACTCCCTCTaGCCTGTGAGGCCATGCTTGTCGCTAAATGATCTGTGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLPGLLSSTSSCNSL*PVRPCLSLNDLWLS Trigger: TGACAACCACAGATCATTTAGCGACAAGCATGGCCTCACAGGCAAGAGGGAGTTACAACTGGAGGTGGAGGAAAGGAGACCAGGAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||
| CDS CAA 90 bp | TTAAGGTGCAAGAAACTGAGAAACTCCATTATAGTGCGGACAATGTaGCTCTCAGGCAGGGGCACATCAACACTTCCTGGTCTCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRCKKLRNSIIVRTM*LSGRGTSTLPGLLS Trigger: GGAAAGGAGACCAGGAAGTGTTGATGTGCCCCTGCCTGAGAGCAACATTGTCCGCACTATAATGGAGTTTCTCAGTTTCTTGCACCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025842.8 ENSMUST00000237521.2 |
||