Pregenerated sensors for GADL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056880Ensembl transcript IDs: ENSMUST00000069651.13, ENSMUST00000069651.14, ENSMUST00000119291.8, ENSMUST00000121770.2, ENSMUST00000121770.3
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACCTGGGCAAATCTCAACATACAGCCTTCATCTATGTCACCTGTaGATCATCTCTGTTCTTAGTCAAGAACCACCCCCACCCAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: TPGQISTYSLHLCHL*IISVLSQEPPPPRN Trigger: ATTTCTGGGTGGGGGTGGTTCTTGACTAAGAACAGAGATGATTCACAGGTGACATAGATGAAGGCTGTATGTTGAGATTTGCCCAGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR GCA 90 bp | TCAGCCCAAATAAAACATACATCTTTAGGCAGTAAGAATCTTACATaGATAGTTTCTCTCTCCCTCTCCCTCTCTCTCCCTCTCCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SAQIKHTSLGSKNLT*IVSLSLSLSLPLPL Trigger: GAGAGGGAGAGGGAGAGAGAGGGAGAGGGAGAGAGAAACTATGCATGTAAGATTCTTACTGCCTAAAGATGTATGTTTTATTTGGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR CCA 90 bp | GACCCACACAGACGTGCAGTGTTTGTTCCCATCCAATATCATGCCTaGAGAAATGGATTGAATGGATTGATGCTTTTTAATCTCTTATCA | + |
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Preference number: 1 (lower is better) Translates to: DPHRRAVFVPIQYHA*RNGLNGLMLFNLLS Trigger: TGATAAGAGATTAAAAAGCATCAATCCATTCAATCCATTTCTCCAGGCATGATATTGGATGGGAACAAACACTGCACGTCTGTGTGGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAGGCAGCCAAAGAGCCCTTAGGACTATTTGCTTAGCATTTTGGTTTTCGGACGCACTGGATCTGTaGCCCTCCCCAGGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AAGSQRALRTICLAFWFSDALDL*PSPGQE Trigger: CTCCTGTCCTGGGGAGGGTCACAGATCCAGTGCGTC...CGAAAACCAAAATGCTAAGCAAATAGTCCTAAGGGCTCTTTGGCTGCCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069651.13 ENSMUST00000121770.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAACATCTGTAAAGGCTTTTACTAGATCATTGTTTCTCAGGATGCATTGTGACGCACTGGATCTGTaGCCCTCCCCAGGACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GKTSVKAFTRSLFLRMHCDALDL*PSPGQE Trigger: CTCCTGTCCTGGGGAGGGTCACAGATCCAGTGCGTC...ACAATGCATCCTGAGAAACAATGATCTAGTAAAAGCCTTTACAGATGTTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTCGACATCTATCACCATaGAGGTCGAGCTGTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: FKTGGEGSPMILSFSSPSRHLSP*RSSCAV Trigger: AACTGCACAGCTCGACCTTCATGGTGATAGATGTCG...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| 3UTR-3UTR CCA 90 bp | TGCATTCCCGAACCTAAAAGAGGGACAGAGACCCACACAGACGTGCAGTGTTTGATCCAATATCATGCCTaGAGAAATGGATTGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: CIPEPKRGTETHTDVQCLIQYHA*RNGLNG Trigger: TCCATTCAATCCATTTCTCCAGGCATGATATTGGAT...CAAACACTGCACGTCTGTGTGGGTCTCTGTCCCTCTTTTAGGTTCGGGAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR CAA 90 bp | CGTGCAGTGTTTGTTCCCATCCAATATCATGCCTGGAGAAATGGATaGAATGGATTGATGCTTTTTAATCTCTTATCAAAACTGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: RAVFVPIQYHAWRNG*NGLMLFNLLSKLFG Trigger: ACCAAACAGTTTTGATAAGAGATTAAAAAGCATCAATCCATTCAATCCATTTCTCCAGGCATGATATTGGATGGGAACAAACACTGCACG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR-3UTR GCA 90 bp | TGTATGTATGTATGTGTGTGTGTGTGTATGTGTGTGTGTGTATCTGAATATTTCGCCCTTAGGACTATTTaGTTAGCATTTTGGTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: CMYVCVCVCMCVCVSEYFALRTI*LAFWFS Trigger: CGAAAACCAAAATGCTAAGCAAATAGTCCTAAGGGC...GAAATATTCAGATACACACACACACATACACACACACACACATACATACATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR TCA 72 bp | CATCTACCTAGTGTGTCTTCAGACGCACTGGATCTGTaGCCCTCCCCAGGACAGGAGTGGTGCCATTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: HLPSVSSDALDL*PSPGQEWCHWG Trigger: CCCCCAATGGCACCACTCCTGTCCTGGGGAGGGTCACAGATCCAGTGCGTCTGAAGACACACTAGGTAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069651.13 ENSMUST00000121770.2 |
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| 3UTR CCA 72 bp | AGGATTGTCATCTACCTAGTGTGTCTTCAGACGCACTaGATCTGTGACCCTCCCCAGGACAGGAGTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RIVIYLVCLQTH*ICDPPQDRSGA Trigger: GGCACCACTCCTGTCCTGGGGAGGGTCACAGATCCAGTGCGTCTGAAGACACACTAGGTAGATGACAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069651.13 ENSMUST00000121770.2 |
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| 3UTR GCA 72 bp | CCGAACCTAAAAGAGGGACAGAGACCCACACAGACGTaGAGTGTTTGTTCCCATCCAATATCATGCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: PNLKEGQRPTQT*SVCSHPISCLE Trigger: CTCCAGGCATGATATTGGATGGGAACAAACACTGCACGTCTGTGTGGGTCTCTGTCCCTCTTTTAGGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR GCA 72 bp | AGTGACCCCAGTGGTATTTTCTATCAACCAAGAAACTaGCATGTCTCACTAAAGGCACAGTGGGACCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SDPSGIFYQPRN*HVSLKAQWDLK Trigger: CTTCAGGTCCCACTGTGCCTTTAGTGAGACATGGCAGTTTCTTGGTTGATAGAAAATACCACTGGGGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAGAGTTTGAGAGACAGAATGTTGTACAACCTTGGACTTCGCTTCTGGAAGGTCTGTGTACCTCTTaGACATGTTCCAGTTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: QREFERQNVVQPWTSLLEGLCTS*TCSSCF Trigger: GAAACAACTGGAACATGTCAAAGAGGTACACAGACC...TTCCAGAAGCGAAGTCCAAGGTTGTACAACATTCTGTCTCTCAAACTCTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR TCA 72 bp | GAGAGAGAGAGAGGAGATGTGGTCTGTGTACCTCTTTaGCATGTTCCAGTTGTTTCAGACTCCCTAAACATT | + |
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Preference number: 3 (lower is better) Translates to: ERERGDVVCVPL*HVPVVSDSLNI Trigger: AATGTTTAGGGAGTCTGAAACAACTGGAACATGTCAAAGAGGTACACAGACCACATCTCCTCTCTCTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR-3UTR CAA 90 bp | GCAAATCTCAACATACAGCCTTCATCTATGTCACCTGTGAATCATCTCTGTTCTGTTTCTCAGGATGCATaGTGCATCAGACTCACCTCT | + |
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Preference number: 3 (lower is better) Translates to: ANLNIQPSSMSPVNHLCSVSQDA*CIRLTS Trigger: AGAGGTGAGTCTGATGCACAATGCATCCTGAGAAAC...AGAACAGAGATGATTCACAGGTGACATAGATGAAGGCTGTATGTTGAGATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR TCA 72 bp | CAAATCTCAACATACAGCCTTCATCTATGTCACCTGTaGATCATCTCTGTTCTTAGTCAAGAACCACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: QISTYSLHLCHL*IISVLSQEPPP Trigger: TGGGGGTGGTTCTTGACTAAGAACAGAGATGATTCACAGGTGACATAGATGAAGGCTGTATGTTGAGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR CCA 72 bp | CCATGTCTCACTAAAGGCACAGTGGGACCTGAAGTGTaGCTATTGAGTTTCCATGATTACCTAGTAAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: PCLTKGTVGPEV*LLSFHDYLVKS Trigger: ACTTTTTACTAGGTAATCATGGAAACTCAATAGCCACACTTCAGGTCCCACTGTGCCTTTAGTGAGACATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| 3UTR GCA 72 bp | ATAAAACATACATCTTTAGGCAGTAAGAATCTTACATaGATAGTTTCTCTCTCCCTCTCCCTCTCTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: IKHTSLGSKNLT*IVSLSLSLSLP Trigger: AGGGAGAGAGAGGGAGAGGGAGAGAGAAACTATGCATGTAAGATTCTTACTGCCTAAAGATGTATGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| CDS-3UTR CCA 90 bp | CCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGTCGAGCTGTGCAGCAAGAGGCATCCACATaGAGCCAGAGGCCATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLPRQADIYHHEGRAVQQEAST*SQRPCL Trigger: GAGGCATGGCCTCTGGCTCCATGTGGATGCCTCTTG...CTGCACAGCTCGACCTTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | CCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGTCGAGCTGTGCAGAGGTCATCCAGAACTTaGATGCATCAGGCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSLPRQADIYHHEGRAVQRSSRT*MHQASC Trigger: GCAGGAGGCCTGATGCATTCAAGTTCTGGATGACCT...CTGCACAGCTCGACCTTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATCCAGGTCAAGGAGCTaGCTCAGCTGCTCAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPSRSRS*LSCSGG Trigger: GCCCCCTGAGCAGCTGAGGCAGCTCCTTGACCTGGA...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | CCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATGCCCTGTGGATGCCATaGAGGAGCCGGCGGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PMILSFSSPSLPRQADIYALWMP*RSRRCF Trigger: AAAGCACCGCCGGCTCCTGCATGGCATCCACAGGGC...ATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | GAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCCAGCAGCTTGTCCTGTaGCTCGCCTGTGTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: EGSPMILSFSSPSLPRQAQQLVL*LACVPH Trigger: ATGAGGGACACAGGCGAGTCACAGGACAAGCTGCTG...GGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAGGCCTCCTGCTGCACTaGATGGACTTGTCTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPGLLLH*MDLSPV Trigger: CACCGGAGACAAGTCCATTCAGTGCAGCAGGAGGCC...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | GAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCCCTCGAGTCCTGATGTaGCCAGAGCCTTCCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EGSPMILSFSSPSLPRQAPRVLM*PEPSRS Trigger: TGACCTGGAAGGCTCTGGGCACATCAGGACTCGAGG...GGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | GAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCCGGTGGTACCAGAGGTaGCGCAGACAAGAAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: EGSPMILSFSSPSLPRQARWYQR*RRQEMA Trigger: TGCCATTTCTTGTCTGCGCCACCTCTGGTACCACCG...GGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTGGGTTCCAGGCCACTaGGTCAGCCCTGTGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: FKTGGEGSPMILSFSSPSWVPGH*VSPVDA Trigger: GGCATCCACAGGGCTGACTCAGTGGCCTGGAACCCA...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | CCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGTCGAGCTGTGCAGGATCAGATTTGTCCTTaGCAAGTAGAGCAGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: PSLPRQADIYHHEGRAVQDQICP*QVEQST Trigger: AGTGCTCTGCTCTACTTGTCAAGGACAAATCTGATC...CTGCACAGCTCGACCTTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAACTTCCTCCATCTCTCTaGGACTCGGTGGAATGTACC | + |
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Preference number: 4 (lower is better) Translates to: LSFSSPSLPRQADIYHHELPPSL*DSVECT Trigger: GGTACATTCCACCGAGTCTCAGAGAGATGGAGGAAG...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAAGCTGCTCAGGGGGCTaGCACTCACATACCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPSCSGG*HSHTFS Trigger: TGAAAAGGTATGTGAGTGGCAGCCCCCTGAGCAGCT...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAAGTAGAGCAGAGCACTaGATTCCCGCCATCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LSFSSPSLPRQADIYHHESRAEH*IPAISI Trigger: GATGCTGATGGCGGGAATCCAGTGCTCTGCTCTACT...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | CCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATAGTACACGTTCTGAGTaGCAATCCCAAGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PMILSFSSPSLPRQADIYSTRSE*QSQGRR Trigger: CCTCCTTCCTTGGGATTGGCACTCAGAACGTGTACT...ATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATAGGCCGCTTTCTTCATaGAGTAATGGCACTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: ILSFSSPSLPRQADIYHHRPLSS*SNGTLP Trigger: CGGCAGAGTGCCATTACTCCATGAAGAAAGCGGCCT...ATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCACCACCTCTTCCATTATaGGCCTACAGGCTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPPPLPL*AYRLLQ Trigger: TTGAAGAAGCCTGTAGGCTCATAATGGAAGAGGTGG...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAGGCACTCTGCCGATGTaGAAAGGATTAATCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPGTLPM*KGLILA Trigger: TGCCAAGATTAATCCTTTTCACATCGGCAGAGTGCC...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCACAGCATAGAGCTGGTTaGAAAATCTTGGATGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPQHRAG*KILDGW Trigger: CCAACCATCCAAGATTTTTCAACCAGCTCTATGCTG...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATACAAAGTACACGTTCTaGGTGCCAATCCCAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILSFSSPSLPRQADIYHHTKYTF*VPIPRK Trigger: CTTCCTTGGGATTGGCACTCAGAACGTGTACTTTGT...ATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATTCATTGCACACATATTaGACACTGAGCCACCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILSFSSPSLPRQADIYHHSLHTY*TLSHLG Trigger: ACCCAGGTGGCTCAGTGTCCAATATGTGTGCAATGA...ATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAACTCTCTGAGACTCGGTaGAATGTACCAAAAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: LSFSSPSLPRQADIYHHELSETR*NVPKAN Trigger: GTTTGCTTTTGGTACATTCCACCGAGTCTCAGAGAG...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR TCA 90 bp | CCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATACACATATTGGACACTaGGCCACCTGGGTTAAATAT | + |
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Preference number: 4 (lower is better) Translates to: PMILSFSSPSLPRQADIYTHIGH*ATWVKY Trigger: ATATTTAACCCAGGTGGCTCAGTGTCCAATATGTGT...ATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | CCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCCCTCTTGTCTCGCTTaGCAAATTTGTTTTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PMILSFSSPSLPRQADIYPSCLA*QICFSR Trigger: TCTGGAAAAACAAATTTGGCAAGCGAGACAAGAGGG...ATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR GCA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTCATCCAGAACTTGAATaGATCAGGCCTCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FKTGGEGSPMILSFSSPSHPELE*IRPPAA Trigger: TGCAGCAGGAGGCCTGATGCATTCAAGTTCTGGATG...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTCCTGCTGCACTGAATaGACTTGTCTCCGGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FKTGGEGSPMILSFSSPSSCCTE*TCLRCH Trigger: ATGACACCGGAGACAAGTCCATTCAGTGCAGCAGGA...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| 3UTR CAA 72 bp | AAAAGAGGGACAGAGACCCACACAGACGTGCAGTGTTaGTTCCCATCCAATATCATGCCTGGAGAAATGGAT | + |
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Preference number: 4 (lower is better) Translates to: KRGTETHTDVQC*FPSNIMPGEMD Trigger: ATCCATTTCTCCAGGCATGATATTGGATGGGAACAAACACTGCACGTCTGTGTGGGTCTCTGTCCCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
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| CDS-3UTR TCA 90 bp | ATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATCTCCGGTGTCATAGCTaGCATCATAGAATTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: ILSFSSPSLPRQADIYHHLRCHS*HHRIYP Trigger: AGGATAAATTCTATGATGTCAGCTATGACACCGGAG...ATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAACTGGTTGAAAAATCTTaGATGGTTGGTTTTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSSPSLPRQADIYHHELVEKS*MVGFDA Trigger: AGCGTCAAAACCAACCATCCAAGATTTTTCAACCAG...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTAGCCTTCTCTTTTCTTaGTTTCGTCTACCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FKTGGEGSPMILSFSSPSSLLFS*FRLPGT Trigger: GGTACCTGGTAGACGAAATCAAGAAAAGAGAAGGCT...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| 3UTR CAA 72 bp | AGAGAGAGAGAGAGGAGATGTGGTCTGTGTACCTCTTaGACATGTTCCAGTTGTTTCAGACTCCCTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RERERRCGLCTS*TCSSCFRLPKH Trigger: ATGTTTAGGGAGTCTGAAACAACTGGAACATGTCAAAGAGGTACACAGACCACATCTCCTCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
||
| 3UTR CAA 72 bp | GCCACCGAAAACTCTAACAAACATTGCAGAGAGAGTTaGAGAGACAGAATGTTGTACAACCTTGGACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ATENSNKHCRES*RDRMLYNLGLR Trigger: GCGAAGTCCAAGGTTGTACAACATTCTGTCTCTCAAACTCTCTCTGCAATGTTTGTTAGAGTTTTCGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.13 |
||
| CDS GCA 90 bp | CAGGCCACTGAGTCAGCCCTGTGGATGCCATGCAGGAGCCGGCGGTaGTTTCTTGACACCAAAGCTGAGCCGCCCCAAGAGGCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QATESALWMPCRSRR*FLDTKAEPPQEAST Trigger: TGTGGATGCCTCTTGGGGCGGCTCAGCTTTGGTGTCAAGAAAGCACCGCCGGCTCCTGCATGGCATCCACAGGGCTGACTCAGTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS GCA 90 bp | AAAGCTGAGCCGCCCCAAGAGGCATCCACATGGAGCCAGAGGCCATaGCTCTCGCAGACCTCAGCAATCTCATCCAGGGGGTCAAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: KAEPPQEASTWSQRP*LSQTSAISSRGSNA Trigger: CGCATTTGACCCCCTGGATGAGATTGCTGAGGTCTGCGAGAGGCATGGCCTCTGGCTCCATGTGGATGCCTCTTGGGGCGGCTCAGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS TCA 90 bp | CTGTCTATCTCATCCAGCAGGAAGTCCATGTCTTCCCGGCTCACTTaGGGGCTGATGACCACCTGGCGGAAGAAGTTGACCTTCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSISSSRKSMSSRLT*GLMTTWRKKLTFPR Trigger: CCGGGGGAAGGTCAACTTCTTCCGCCAGGTGGTCATCAGCCCTCAAGTGAGCCGGGAAGACATGGACTTCCTGCTGGATGAGATAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS GCA 90 bp | GACTCGCCTGTGTCCCTCATCTCCAGGTCAAGGAGCTGCCTCAGCTaGTCAGGGGGCTGCCACTCACATACCTTTTCATTGACGTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: DSPVSLISRSRSCLS*SGGCHSHTFSLTSV Trigger: TACGGACGTCAATGAAAAGGTATGTGAGTGGCAGCCCCCTGAGCAGCTGAGGCAGCTCCTTGACCTGGAGATGAGGGACACAGGCGAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS TCA 90 bp | GCTGAAGTGGATGACGTCTTGGCAGAGTTTCAGCAGCTTGTCCTGTaGCTCGCCTGTGTCCCTCATCTCCAGGTCAAGGAGCTGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AEVDDVLAEFQQLVL*LACVPHLQVKELPQ Trigger: CTGAGGCAGCTCCTTGACCTGGAGATGAGGGACACAGGCGAGTCACAGGACAAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS TCA 90 bp | CCTCGAGTCCTGATGTGCCCAGAGCCTTCCAGGTCATCCAGAACTTaGATGCATCAGGCCTCCTGCTGCACTGAATGGACTTGTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVLMCPEPSRSSRT*MHQASCCTEWTCLR Trigger: CCGGAGACAAGTCCATTCAGTGCAGCAGGAGGCCTGATGCATTCAAGTTCTGGATGACCTGGAAGGCTCTGGGCACATCAGGACTCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGCCGGCGGTGCTTTCTaGACACCAAAGCTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EGSPMILSFSSPSLPRQAAGGAF*TPKLSR Trigger: GCGGCTCAGCTTTGGTGTCAAGAAAGCACCGCCGGC...GGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGTCGAGCTGTGCAGGAAGTGGATGACGTCTaGGCAGAGTTTCAGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPRQADIYHHEGRAVQEVDDV*AEFQQL Trigger: AAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTC...CTGCACAGCTCGACCTTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAACCCGCCATCAGCATCTaGTGTGGGTTCCAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSFSSPSLPRQADIYHHEPAISI*CGFQAT Trigger: AGTGGCCTGGAACCCACACAAGATGCTGATGGCGGG...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CCA 90 bp | CTCCTTGATGGCTGGGGCCACCAAGCTAAGCTTTCTCCAGAACTCTaGTCCTTCCTCCATCTCTCTGAGACTCGGTGGAATGTACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLDGWGHQAKLSPEL*SFLHLSETRWNVPK Trigger: TTTTGGTACATTCCACCGAGTCTCAGAGAGATGGAGGAAGGACCAGAGTTCTGGAGAAAGCTTAGCTTGGTGGCCCCAGCCATCAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS-3UTR CAA 90 bp | GAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCCAGGTCATCCAGAACTaGAATGCATCAGGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSPMILSFSSPSLPRQAQVIQN*NASGLL Trigger: CAGGAGGCCTGATGCATTCAAGTTCTGGATGACCTG...GGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CCA 90 bp | GCCCAACATCAGACTTCCCTTCTTCATCATTTTCTCCTTGATGGCTaGGGCCACCAAGCTAAGCTTTCTCCAGAACTCTGGTCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQHQTSLLHHFLLDG*GHQAKLSPELWSFL Trigger: GAGGAAGGACCAGAGTTCTGGAGAAAGCTTAGCTTGGTGGCCCCAGCCATCAAGGAGAAAATGATGAAGAAGGGAAGTCTGATGTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS-3UTR CAA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAGCTGGAACAGGTACGTaGCTTTGGCAGAGTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPAGTGT*LWQSST Trigger: AGTGCTACTCTGCCAAAGCAACGTACCTGTTCCAGC...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CCA 90 bp | AAAAATCTTGGATGGTTGGTTTTGACGCTGAAGTGGATGACGTCTTaGCAGAGTTTCAGCAGCTTGTCCTGTGACTCGCCTGTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNLGWLVLTLKWMTS*QSFSSLSCDSPVSL Trigger: GAGGGACACAGGCGAGTCACAGGACAAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTCAGCGTCAAAACCAACCATCCAAGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS-3UTR CAA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAGGCTCCATCAGCAGCTaGAAGCCTTCTCTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPGSISS*KPSLFL Trigger: CAAGAAAAGAGAAGGCTTCAAGCTGCTGATGGAGCC...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAATCTCGCTTGCCAAATTaGTTTTTCCAGATCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSFSSPSLPRQADIYHHESRLPN*FFQILR Trigger: CCGGAGGATCTGGAAAAACAAATTTGGCAAGCGAGA...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CCA 90 bp | GCAGATAAACTGGACTGTCCTCAAGCTAAGCTTTCTCCAGAACTCTaGTCCTTCCTCCATCTCTCTGAGACTCGGTGGAATGTACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ADKLDCPQAKLSPEL*SFLHLSETRWNVPK Trigger: TTTTGGTACATTCCACCGAGTCTCAGAGAGATGGAGGAAGGACCAGAGTTCTGGAGAAAGCTTAGCTTGAGGACAGTCCAGTTTATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS-3UTR CAA 90 bp | ATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATCCCCTCTTGTCTCGCTaGCCAAATTTGTTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSFSSPSLPRQADIYHHPLLSR*PNLFFQ Trigger: CTGGAAAAACAAATTTGGCAAGCGAGACAAGAGGGG...ATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CCA 90 bp | CAAGGAGTAGTAATCAAGGCCAGCATAGAGCTGGTTGAAAAATCTTaGATGGTTGGTTTTGACGCTGAAGTGGATGACGTCTTGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGVVIKASIELVEKS*MVGFDAEVDDVLAE Trigger: CTCTGCCAAGACGTCATCCACTTCAGCGTCAAAACCAACCATCCAAGATTTTTCAACCAGCTCTATGCTGGCCTTGATTACTACTCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAAAGCCTTCTCTTTTCTaGATTTCGTCTACCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSFSSPSLPRQADIYHHEKPSLF*ISSTRY Trigger: GTACCTGGTAGACGAAATCAAGAAAAGAGAAGGCTT...TTCATGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS GCA 90 bp | TCATTTTTCCTCTTCCATCTGTTTCTACAAAGTACACGTTCTGAGTaGCAATCCCAAGGAAGGAGGCCGCTTTCTTCATGGAGTAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFFLFHLFLQSTRSE*QSQGRRPLSSWSNG Trigger: GCCATTACTCCATGAAGAAAGCGGCCTCCTTCCTTGGGATTGGCACTCAGAACGTGTACTTTGTAGAAACAGATGGAAGAGGAAAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS-3UTR CAA 90 bp | GATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCAAGCTTTCACATCTGTTaGAGGTCCATTAAGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSFFLFAIFTPAGRHLSPSFHIC*RSIKYN Trigger: GTTGTACTTAATGGACCTCAAACAGATGTGAAAGCT...TGGTGATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | CCCATGATTCTTTCTTTCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATTTAAGAAGATCAGATTaGTCCTTGACAAGTAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PMILSFSSPSLPRQADIYLRRSD*SLTSRA Trigger: TGCTCTACTTGTCAAGGACAAATCTGATCTTCTTAA...ATAGATGTCGGCCTGCCGGGGTAAAGATGGCGAAGAGAAAGAAAGAATCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTCACATACCTTTTCATaGACGTCCGTAGCTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKTGGEGSPMILSFSSPSSHTFS*TSVAFK Trigger: TTTGAAAGCTACGGACGTCAATGAAAAGGTATGTGA...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGACTGGGGGTGAAGGTTCTCCCATGATTCTTTCTTTCTCTTCGCCATCTTACCAAAAGCAAACATaGGTATATTCAGGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FKTGGEGSPMILSFSSPSYQKQT*VYSGSI Trigger: GATGGAGCCTGAATATACCAATGTTTGCTTTTGGTA...AGATGGCGAAGAGAAAGAAAGAATCATGGGAGAACCTTCACCCCCAGTCTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119291.8 |
||
| CDS CAA 72 bp | CTTACCAGGGGTCATCTCCTTCTGGCCACTGTCTCCTaGGCTGGCACCCTGGTGGTCGTCGCGGGCGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTRGHLLLATVS*AGTLVVVAGVA Trigger: AGCCACGCCCGCGACGACCACCAGGGTGCCAGCCAAGGAGACAGTGGCCAGAAGGAGATGACCCCTGGTAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS GCA 72 bp | CCGCCCCAAGAGGCATCCACATGGAGCCAGAGGCCATaGCTCTCGCAGACCTCAGCAATCTCATCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPQEASTWSQRP*LSQTSAISSRG Trigger: CCCCCTGGATGAGATTGCTGAGGTCTGCGAGAGGCATGGCCTCTGGCTCCATGTGGATGCCTCTTGGGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 90 bp | CTGAGTCAGCCCTGTGGATGCCATGCAGGAGCCGGCGGTGCTTTCTaGACACCAAAGCTGAGCCGCCCCAAGAGGCATCCACATGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSQPCGCHAGAGGAF*TPKLSRPKRHPHGA Trigger: GGCTCCATGTGGATGCCTCTTGGGGCGGCTCAGCTTTGGTGTCAAGAAAGCACCGCCGGCTCCTGCATGGCATCCACAGGGCTGACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS GCA 72 bp | GACTCGCCTGTGTCCCTCATCTCCAGGTCAAGGAGCTaGCTCAGCTGCTCAGGGGGCTGCCACTCACATACC | + |
|
Preference number: 6 (lower is better) Translates to: DSPVSLISRSRS*LSCSGGCHSHT Trigger: GGTATGTGAGTGGCAGCCCCCTGAGCAGCTGAGGCAGCTCCTTGACCTGGAGATGAGGGACACAGGCGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS GCA 72 bp | GAGTCAGCCCTGTGGATGCCATGCAGGAGCCGGCGGTaGTTTCTTGACACCAAAGCTGAGCCGCCCCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESALWMPCRSRR*FLDTKAEPPQE Trigger: CTCTTGGGGCGGCTCAGCTTTGGTGTCAAGAAAGCACCGCCGGCTCCTGCATGGCATCCACAGGGCTGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 90 bp | GCTGTCTATCTCATCCAGCAGGAAGTCCATGTCTTCCCGGCTCACTaGAGGGCTGATGACCACCTGGCGGAAGAAGTTGACCTTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVYLIQQEVHVFPAH*RADDHLAEEVDLPP Trigger: CGGGGGAAGGTCAACTTCTTCCGCCAGGTGGTCATCAGCCCTCAAGTGAGCCGGGAAGACATGGACTTCCTGCTGGATGAGATAGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS TCA 72 bp | TCATCCAGCAGGAAGTCCATGTCTTCCCGGCTCACTTaGGGGCTGATGACCACCTGGCGGAAGAAGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRKSMSSRLT*GLMTTWRKKLT Trigger: GGTCAACTTCTTCCGCCAGGTGGTCATCAGCCCTCAAGTGAGCCGGGAAGACATGGACTTCCTGCTGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS GCA 72 bp | TCCAGGTCAAGGAGCTGCCTCAGCTGCTCAGGGGGCTaGCACTCACATACCTTTTCATTGACGTCCGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSRSCLSCSGG*HSHTFSLTSVA Trigger: AGCTACGGACGTCAATGAAAAGGTATGTGAGTGGCAGCCCCCTGAGCAGCTGAGGCAGCTCCTTGACCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 72 bp | CTCATCCAGCAGGAAGTCCATGTCTTCCCGGCTCACTaGAGGGCTGATGACCACCTGGCGGAAGAAGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LIQQEVHVFPAH*RADDHLAEEVD Trigger: GTCAACTTCTTCCGCCAGGTGGTCATCAGCCCTCAAGTGAGCCGGGAAGACATGGACTTCCTGCTGGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069651.14 |
||
| CDS TCA 72 bp | GATGACGTCTTGGCAGAGTTTCAGCAGCTTGTCCTGTaGCTCGCCTGTGTCCCTCATCTCCAGGTCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DDVLAEFQQLVL*LACVPHLQVKE Trigger: CTCCTTGACCTGGAGATGAGGGACACAGGCGAGTCACAGGACAAGCTGCTGAAACTCTGCCAAGACGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 72 bp | CTGAAGTGGATGACGTCTTGGCAGAGTTTCAGCAGCTaGTCCTGTGACTCGCCTGTGTCCCTCATCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKWMTSWQSFSS*SCDSPVSLISR Trigger: CCTGGAGATGAGGGACACAGGCGAGTCACAGGACAAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS TCA 72 bp | CTGATGTGCCCAGAGCCTTCCAGGTCATCCAGAACTTaGATGCATCAGGCCTCCTGCTGCACTGAATGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LMCPEPSRSSRT*MHQASCCTEWT Trigger: AGTCCATTCAGTGCAGCAGGAGGCCTGATGCATTCAAGTTCTGGATGACCTGGAAGGCTCTGGGCACATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS GCA 72 bp | TGTGCCCAGAGCCTTCCAGGTCATCCAGAACTTGAATaGATCAGGCCTCCTGCTGCACTGAATGGACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CAQSLPGHPELE*IRPPAALNGLV Trigger: GACAAGTCCATTCAGTGCAGCAGGAGGCCTGATGCATTCAAGTTCTGGATGACCTGGAAGGCTCTGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CCA 72 bp | GGATGGTTGGTTTTGACGCTGAAGTGGATGACGTCTTaGCAGAGTTTCAGCAGCTTGTCCTGTGACTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWLVLTLKWMTS*QSFSSLSCDSP Trigger: AGGCGAGTCACAGGACAAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTCAGCGTCAAAACCAACCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 72 bp | AGAGGTGGCGCAGACAAGAAATGGCACCGCCCCCTCTaGTCTCGCTTGCCAAATTTGTTTTTCCAGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGGADKKWHRPL*SRLPNLFFQIL Trigger: GAGGATCTGGAAAAACAAATTTGGCAAGCGAGACAAGAGGGGGCGGTGCCATTTCTTGTCTGCGCCACCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CCA 72 bp | CAGAAACACTGGGGACACCTCATACGTATAAATGCTTaGATTCAGCGCCTCTGTTATAATCCGGGCCGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QKHWGHLIRINA*IQRLCYNPGRQ Trigger: TTGGCGGCCCGGATTATAACAGAGGCGCTGAATCCAAGCATTTATACGTATGAGGTGTCCCCAGTGTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
||
| CDS CAA 72 bp | GCAGACAAGAAATGGCACCGCCCCCTCTTGTCTCGCTaGCCAAATTTGTTTTTCCAGATCCTCCGGTATCAT | + |
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Preference number: 6 (lower is better) Translates to: ADKKWHRPLLSR*PNLFFQILRYH Trigger: ATGATACCGGAGGATCTGGAAAAACAAATTTGGCAAGCGAGACAAGAGGGGGCGGTGCCATTTCTTGTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS GCA 72 bp | CTCTTCCATCTGTTTCTACAAAGTACACGTTCTGAGTaGCAATCCCAAGGAAGGAGGCCGCTTTCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: LFHLFLQSTRSE*QSQGRRPLSSW Trigger: CCATGAAGAAAGCGGCCTCCTTCCTTGGGATTGGCACTCAGAACGTGTACTTTGTAGAAACAGATGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS TCA 72 bp | CCGCTTTCTTCATGGAGTAATGGCACTCTGCCGATGTaGAAAGGATTAATCTTGGCAAACCAGACAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLSSWSNGTLPM*KGLILANQTGL Trigger: AAGGCCTGTCTGGTTTGCCAAGATTAATCCTTTTCACATCGGCAGAGTGCCATTACTCCATGAAGAAAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS TCA 72 bp | TTTCCTCTTCCATCTGTTTCTACAAAGTACACGTTCTaGGTGCCAATCCCAAGGAAGGAGGCCGCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FPLPSVSTKYTF*VPIPRKEAAFF Trigger: GAAGAAAGCGGCCTCCTTCCTTGGGATTGGCACTCAGAACGTGTACTTTGTAGAAACAGATGGAAGAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CAA 72 bp | TCAGGCTCCATCAGCAGCTTGAAGCCTTCTCTTTTCTaGATTTCGTCTACCAGGTACCGAGATAGAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SGSISSLKPSLF*ISSTRYRDRAK Trigger: CTTTGCTCTATCTCGGTACCTGGTAGACGAAATCAAGAAAAGAGAAGGCTTCAAGCTGCTGATGGAGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CCA 72 bp | TTGAAAAATCTTGGATGGTTGGTTTTGACGCTGAAGTaGATGACGTCTTGGCAGAGTTTCAGCAGCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LKNLGWLVLTLK*MTSWQSFSSLS Trigger: GGACAAGCTGCTGAAACTCTGCCAAGACGTCATCCACTTCAGCGTCAAAACCAACCATCCAAGATTTTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CCA 72 bp | GTAATCAAGGCCAGCATAGAGCTGGTTGAAAAATCTTaGATGGTTGGTTTTGACGCTGAAGTGGATGACGTC | + |
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Preference number: 6 (lower is better) Translates to: VIKASIELVEKS*MVGFDAEVDDV Trigger: GACGTCATCCACTTCAGCGTCAAAACCAACCATCCAAGATTTTTCAACCAGCTCTATGCTGGCCTTGATTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CAA 72 bp | TCTCTGAGACTCGGTGGAATGTACCAAAAGCAAACATaGGTATATTCAGGCTCCATCAGCAGCTTGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SLRLGGMYQKQT*VYSGSISSLKP Trigger: AGGCTTCAAGCTGCTGATGGAGCCTGAATATACCAATGTTTGCTTTTGGTACATTCCACCGAGTCTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CAA 90 bp | TTGGTATATTCAGGCTCCATCAGCAGCTTGAAGCCTTCTCTTTTCTaGATTTCGTCTACCAGGTACCGAGATAGAGCAAAGGCACGATTT | + |
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Preference number: 6 (lower is better) Translates to: LVYSGSISSLKPSLF*ISSTRYRDRAKARF Trigger: AAATCGTGCCTTTGCTCTATCTCGGTACCTGGTAGACGAAATCAAGAAAAGAGAAGGCTTCAAGCTGCTGATGGAGCCTGAATATACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CAA 90 bp | GATGTGAAAAGGATTAATCTTGGCAAACCAGACAGGCCTTTCTCTTaGATATCAGGGCAATGTCTGTATCTAGCTAAATTCATTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: DVKRINLGKPDRPFS*ISGQCLYLAKFIAH Trigger: GTGTGCAATGAATTTAGCTAGATACAGACATTGCCCTGATATCAAAGAGAAAGGCCTGTCTGGTTTGCCAAGATTAATCCTTTTCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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| CDS CAA 72 bp | AGGATTAATCTTGGCAAACCAGACAGGCCTTTCTCTTaGATATCAGGGCAATGTCTGTATCTAGCTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: RINLGKPDRPFS*ISGQCLYLAKF Trigger: GAATTTAGCTAGATACAGACATTGCCCTGATATCAAAGAGAAAGGCCTGTCTGGTTTGCCAAGATTAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069651.14 ENSMUST00000119291.8 ENSMUST00000121770.3 |
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