RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GADD45GIP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033751

Ensembl transcript IDs: ENSMUST00000036734.6

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATaGGCCGGGCGACCCAGGAAGTCACAACTTGAGGGAGAATGTGTA +
Preference number: 1 (lower is better)
Translates to: EHSQVEGFSRPGVGE*AGRPRKSQLEGECV
Trigger: TACACATTCTCCCTCAAGTTGTGACTTCCTGGGTCGCCCGGCTCATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR TCA 90 bp CCTCCTTCCTCCACCATGATGAGGGGAAGCTGGAGCCCTAAGCTTTaGTCCTCTATTGGAGTGGCCCAGATCTTTCCATCTGGAGTAAGT +
Preference number: 1 (lower is better)
Translates to: PPSSTMMRGSWSPKL*SSIGVAQIFPSGVS
Trigger: ACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAAAGCTTAGGGCTCCAGCTTCCCCTCATCATGGTGGAGGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR GCA 90 bp AATTACTGGAGATTAATGTTGGTAAACAGAAGCCTCCTCCTCTCCTaGCATCTGCTCCTTCATTATTTGCCCATCCATTCCCCTTTCTCT +
Preference number: 1 (lower is better)
Translates to: NYWRLMLVNRSLLLS*HLLLHYLPIHSPFS
Trigger: AGAGAAAGGGGAATGGATGGGCAAATAATGAAGGAGCAGATGGCAGGAGAGGAGGAGGCTTCTGTTTACCAACATTAATCTCCAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR-3UTR TCA 90 bp CTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGAGAAACGGGGAGGAGCCTAGGCAGGAAGTCACAACTTaGGGGAGAATGTGTAGAATA +
Preference number: 2 (lower is better)
Translates to: LAGGTGEVGMLRNGEEPRQEVTT*GRMCRI
Trigger: TATTCTACACATTCTCCCTCAAGTTGTGACTTCCTG...CCTAGGCTCCTCCCCGTTTCTCAGCATGCCCACTTCACCTGTGCCCCCGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR-3UTR GCA 90 bp ACAGCTGTTTGTGAGTCTGAGCTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGTCCTCTCCTGCCATCTaGTCCTTCATTATTTGCCCA +
Preference number: 2 (lower is better)
Translates to: TAVCESELAGGTGEVGMLSSPAI*SFIICP
Trigger: TGGGCAAATAATGAAGGAGCAGATGGCAGGAGAGGA...CAGCATGCCCACTTCACCTGTGCCCCCGGCTAGCTCAGACTCACAAACAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR-3UTR CCA 90 bp CCCCATTCCCATATCAGTCCGAGAAGACCTGGGCCAGACAGCTGTCCCCGTCCTCTACTCAAAAGTTGTTaGCAAGACCATGAGGCGACA +
Preference number: 2 (lower is better)
Translates to: PHSHISPRRPGPDSCPRPLLKSC*QDHEAT
Trigger: TGTCGCCTCATGGTCTTGCCAACAACTTTTGAGTAG...AGGACGGGGACAGCTGTCTGGCCCAGGTCTTCTCGGACTGATATGGGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR-3UTR GCA 90 bp GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTCTGCTCCTTCTATCATaGAGTCTGTTTGGCTGTACT +
Preference number: 2 (lower is better)
Translates to: VLKMSPNNGSCLLELLTALLLLS*SLFGCT
Trigger: AGTACAGCCAAACAGACTGCATGATAGAAGGAGCAG...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR-3UTR CAA 90 bp CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGATATCATGCAGTCTGTTaGGCTGTACTCCCCCTGGTA +
Preference number: 3 (lower is better)
Translates to: PSPASHPPEVAPIPISVRYHAVC*AVLPLV
Trigger: TACCAGGGGGAGTACAGCCAAACAGACTGCATGATA...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR TCA 72 bp ACAGCCCAGCCTACTCAAAAGTTGTTGGCAAGACCATaGGGCGACAGATGGGCCCCTCTTGGCCTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: TAQPTQKLLARP*GDRWAPLGLCP
Trigger: GGGACAGAGGCCAAGAGGGGCCCATCTGTCGCCTCATGGTCTTGCCAACAACTTTTGAGTAGGCTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR TCA 72 bp TCCACCATGATGAGGGGAAGCTGGAGCCCTAAGCTTTaGTCCTCTATTGGAGTGGCCCAGATCTTTCCATCT +
Preference number: 3 (lower is better)
Translates to: STMMRGSWSPKL*SSIGVAQIFPS
Trigger: AGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAAAGCTTAGGGCTCCAGCTTCCCCTCATCATGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR GCA 72 bp AGCTCAACCCTAGAAGGACTGCTGCTCCTTCTATCATaGAGTCTGTTTGGCTGTACTCCCCCTGGTAATTGG +
Preference number: 3 (lower is better)
Translates to: SSTLEGLLLLLS*SLFGCTPPGNW
Trigger: CCAATTACCAGGGGGAGTACAGCCAAACAGACTGCATGATAGAAGGAGCAGCAGTCCTTCTAGGGTTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR CCA 72 bp TTGATCCTCTATTGGAGTGGCCCAGATCTTTCCATCTaGAGTAAGTCTATGTTAGAAGCCAAAGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LILYWSGPDLSI*SKSMLEAKGLL
Trigger: GAGAAGGCCTTTGGCTTCTAACATAGACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR GCA 72 bp AATAAAGTTTTAAAAATGAGCCCTAATAATGGTTCATaGCTACTGGAGCTTCTCACAGCTGTTTGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: NKVLKMSPNNGS*LLELLTAVCES
Trigger: AGACTCACAAACAGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAACTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp GTGTCCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGCAGCTGCTCTGGGGTaGGCCACAGGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSRCEHSQVEGFSRPGVGAAALG*ATGRPG
Trigger: CCCCGGCCTCCCTGTGGCCCACCCCAGAGCAGCTGC...CCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp GTGTCCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGGGGCGCACGGTAGCTaGGGGACCTGGGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSRCEHSQVEGFSRPGVGGAHGS*GTWDPE
Trigger: CTCTGGGTCCCAGGTCCCGCAGCTACCGTGCGCCCC...CCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGGACAC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp GAGTCTGAGCTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGAGAAACGGGGAGCTCGCGCAGCTGCTCTaGGGTGGGCCACAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESELAGGTGEVGMLRNGELAQLL*GGPQGG
Trigger: GCCTCCCTGTGGCCCACCCCAGAGCAGCTGCGCGAG...CTCCCCGTTTCTCAGCATGCCCACTTCACCTGTGCCCCCGGCTAGCTCAGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp AGCCTTACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: SLTDGPQHLLPLETWAPALASKA*CCKRSD
Trigger: GTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAG...GGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp AGCCTTACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLTDGPQHLLPLETWAPALGHAL*DTLLPG
Trigger: GCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAG...GGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTAAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp GGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCTCAGCTCAACCCTGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACC +
Preference number: 4 (lower is better)
Translates to: GPSISSLWKLGPLPQLNPAATLA*SLSSGT
Trigger: GGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGC...AGGGTTGAGCTGAGGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGACTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: PSPASHPPEVAPIPISVRLGYHS*SSASNS
Trigger: CGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAG...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
3UTR CAA 72 bp TACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTaGGGCCCCTGCCTCAGCTCAACCCTAGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: YRRAPASPPSGN*GPCLSSTLEGL
Trigger: CAGTCCTTCTAGGGTTGAGCTGAGGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGAGACACTGCTGAGTCCTaGGCTTCAGCAGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: PSPASHPPEVAPIPISVRDTAES*ASAEAI
Trigger: TATGGCCTCTGCTGAAGCCCAGGACTCAGCAGTGTC...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR TCA 90 bp CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGACGCTCCTTGTCAGCCTaGATTTTCTCCCAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PSPASHPPEVAPIPISVRRSLSA*IFSQRS
Trigger: AGAACGCTGGGAGAAAATTCAGGCTGACAAGGAGCG...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR TCA 90 bp CCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATTTCACCAGACACTGCTaGGTCCTGGGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGVNTARWRDSPAQVLGNFTRHC*VLGFSR
Trigger: TCTGCTGAAGCCCAGGACTCAGCAGTGTCTGGTGAA...ATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp CCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATTCCTGTAATAGTTCCTaGAAGCGAGCACTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGVNTARWRDSPAQVLGNSCNSS*KRALLG
Trigger: CCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGA...ATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp TTTCTCTCTCCCCAAAGCCCCAGTTCATGGCATGGCCTAGTGTCCAGGTGTGAAGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLSPQSPSSWHGLVSRCEVASWP*TLRYAA
Trigger: AGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCAC...TTCACACCTGGACACTAGGCCATGCCATGAACTGGGGCTTTGGGGAGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp GCTAATTACTGGAGATTAATGTTGGTAAACAGAAGCCTCCTCCTCTCCTGCCATGAAGCGAGCACTCCTTaGGTCCACGTGGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ANYWRLMLVNRSLLLSCHEASTP*VHVVAQ
Trigger: CTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTC...ATGGCAGGAGAGGAGGAGGCTTCTGTTTACCAACATTAATCTCCAGTAATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTGGTAGCTGCGGGACCTaGGACCCAGAGCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VLKMSPNNGSCLLELLTAGSCGT*DPEPQR
Trigger: TCTCTGTGGCTCTGGGTCCCAGGTCCCGCAGCTACC...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR GCA 90 bp GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VLKMSPNNGSCLLELLTAKRSDS*MVAKLG
Trigger: CCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTT...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CCA 90 bp TATTGGAGTGGCCCAGATCTTTCCATCTGGAGTAAGTCTATGTTAGAAGCCAAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATAC +
Preference number: 4 (lower is better)
Translates to: YWSGPDLSIWSKSMLEAKSFVAS*PCTLRY
Trigger: GTATCGCAGAGTGCATGGCCAAGATGCCACAAATGA...TTTGGCTTCTAACATAGACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp CGGGTACCATTCTTGCTCCTCGGCCTCCAACTCGCGCAGCTGCTCTaGGGTGGGCCACAGGGAGGCCGGGGGCACCCCGGAGATGGCGCC +
Preference number: 5 (lower is better)
Translates to: RVPFLLLGLQLAQLL*GGPQGGRGHPGDGA
Trigger: GGCGCCATCTCCGGGGTGCCCCCGGCCTCCCTGTGGCCCACCCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp GCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTaGTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTAC +
Preference number: 5 (lower is better)
Translates to: AIRCSLAWRLASKAC*CKRSDSCMVAKLGY
Trigger: GTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp TCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SAIRCSLAWRLASKA*CCKRSDSCMVAKLG
Trigger: CCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp AAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCGCGCAGCTGCTCTGGGGTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: KRSDSCMVAKLGYHS*SSASNSRSCSGVGH
Trigger: GTGGCCCACCCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp TGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: WRLASKACCCKRSDS*MVAKLGYHSCSSAS
Trigger: GGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp TGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTaGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCT +
Preference number: 5 (lower is better)
Translates to: CGILAMHSAIRCSLA*RLASKACCCKRSDS
Trigger: AGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp ATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTaGAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTACCAT +
Preference number: 5 (lower is better)
Translates to: IRCSLAWRLASKACC*KRSDSCMVAKLGYH
Trigger: ATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp TCATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTaGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: SFVASWPCTLRYAAP*LGALPPRPAAASAA
Trigger: CGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp GCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGGCCTCCAACT +
Preference number: 5 (lower is better)
Translates to: ALPPRPAAASAATLA*SLSSGTILAPRPPT
Trigger: AGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp TTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTaGTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: FSIICGILAMHSAIR*SLAWRLASKACCCK
Trigger: CTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp CTTTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LSPVFNHLWHLGHAL*DTLLPGLAPCLQGL
Trigger: CAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CAA 90 bp GAAGTGGGCATGCTGAGAAACGGGGAGGAGCCTAGGAGCCTTACAGACGGGCCCATCATTTGTGGCATCTaGGCCATGCACTCTGCGATA +
Preference number: 5 (lower is better)
Translates to: EVGMLRNGEEPRSLTDGPIICGI*AMHSAI
Trigger: TATCGCAGAGTGCATGGCCAAGATGCCACAAATGAT...GGGCCCGTCTGTAAGGCTCCTAGGCTCCTCCCCGTTTCTCAGCATGCCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CAA 90 bp CAGCTCAACCCTAGAAGGACTGCTGCTCCTTCTATCATGCAGTCTGTTTGGCTGGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: QLNPRRTAAPSIMQSVWLGSEHS*GPRGSP
Trigger: TGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCC...CAGCCAAACAGACTGCATGATAGAAGGAGCAGCAGTCCTTCTAGGGTTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp GCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASAFASFQSFVASWP*TLRYAAPWLGALPP
Trigger: TGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp GTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: VLASAFASFQSFVAS*PCTLRYAAPWLGAL
Trigger: CAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 90 bp CTCCCAGCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTaGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: LPAFSLLLSPVFNHL*HLGHALCDTLLPGL
Trigger: CAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 90 bp GCCTCCTTCTTCTGTCGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTaGTGCTTGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTC +
Preference number: 5 (lower is better)
Translates to: ASFFCRCLSSFRRFR*CLSRSCNSSWKRAL
Trigger: GAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACGACAGAAGAAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CAA 90 bp TTTCTCTCTCCCCAAAGCCCCAGTTCATGGCATGGCCTAGTGTCCAGGTGTGAACCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCA +
Preference number: 5 (lower is better)
Translates to: FLSPQSPSSWHGLVSRCEPVFNH*WHLGHA
Trigger: TGCATGGCCAAGATGCCACAAATGATTGAAAACTGG...TTCACACCTGGACACTAGGCCATGCCATGAACTGGGGCTTTGGGGAGAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS-3UTR CAA 90 bp GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTGCTCGGGTACCATTCTaGCTCCTCGGCCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: VLKMSPNNGSCLLELLTAARVPF*LLGLQL
Trigger: GAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGC...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 72 bp GCACCCCGGAGATGGCGCCATGTCGTCCGAACTGCTTaGCCACATAGCGGGGCGTTAGCTGCCATCGCGGGG +
Preference number: 6 (lower is better)
Translates to: APRRWRHVVRTA*PHSGALAAIAG
Trigger: CCCCGCGATGGCAGCTAACGCCCCGCTATGTGGCCAAGCAGTTCGGACGACATGGCGCCATCTCCGGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp CGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGACTCTTGCATGGTCGCT +
Preference number: 6 (lower is better)
Translates to: RCSLAWRLASKA*CCKRSDSCMVA
Trigger: AGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp GCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTaGCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTC +
Preference number: 6 (lower is better)
Translates to: ALCDTLLPGLAP*LQGLLLQAQRL
Trigger: GAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 72 bp TTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTaGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGC +
Preference number: 6 (lower is better)
Translates to: LAMHSAIRCSLA*RLASKACCCKR
Trigger: GCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp TGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTaGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACT +
Preference number: 6 (lower is better)
Translates to: CTLRYAAPWLGA*PPRPAAASAAT
Trigger: AGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp CTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTaGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCG +
Preference number: 6 (lower is better)
Translates to: LGHALCDTLLPG*APCLQGLLLQA
Trigger: CGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp TCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTaGAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTC +
Preference number: 6 (lower is better)
Translates to: SLAWRLASKACC*KRSDSCMVAKL
Trigger: GAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp TGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTaGTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAG +
Preference number: 6 (lower is better)
Translates to: CSLAWRLASKAC*CKRSDSCMVAK
Trigger: CTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 72 bp GCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTaGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: ASWPCTLRYAAP*LGALPPRPAAA
Trigger: TGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 90 bp TTGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTaGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTC +
Preference number: 6 (lower is better)
Translates to: LWHLGHALCDTLLPG*APCLQGLLLQAQRL
Trigger: GAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp GACTCTTGCATGGTCGCTAAGCTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCGCGCAGCTGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: DSCMVAKLGYHS*SSASNSRSCSG
Trigger: CCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp GCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGGTACCATTCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: ASKACCCKRSDS*MVAKLGYHSCS
Trigger: GGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp ATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTaGTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ICGILAMHSAIR*SLAWRLASKAC
Trigger: GCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 72 bp CCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: PRPAAASAATLA*SLSSGTILAPR
Trigger: CCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp CTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCAGGCGTTCCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: LGPVIVPGSEHS*GPRGSPGVPGP
Trigger: AGGCCCAGGAACGCCTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 90 bp GCTGCTTGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCAGGCGTTCCTGGGCCTCAGCCTGTA +
Preference number: 6 (lower is better)
Translates to: AACLGPVIVPGSEHS*GPRGSPGVPGPQPV
Trigger: TACAGGCTGAGGCCCAGGAACGCCTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp GTTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: VFNHLWHLGHAL*DTLLPGLAPCL
Trigger: GAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS GCA 72 bp TTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCTCCCTGGCTTGGCGCC +
Preference number: 6 (lower is better)
Translates to: FASFQSFVASWP*TLRYAAPWLGA
Trigger: GGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 90 bp CGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTaGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: RSRFCFRQFSIICGI*AMHSAIRCSLAWRL
Trigger: AAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 90 bp TTTCTCCCAGCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: FLPAFSLLLSPVFNH*WHLGHALCDTLLPG
Trigger: GCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGCTGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CCA 72 bp TCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATACGCTGCTCCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: SAFASFQSFVAS*PCTLRYAAPWL
Trigger: AAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp TTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTaGGCCATGCACTCTGCGATACGCTGCTCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: FCFRQFSIICGI*AMHSAIRCSLA
Trigger: AGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp GCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCACTCTGCGATACGCTG +
Preference number: 6 (lower is better)
Translates to: AFSLLLSPVFNH*WHLGHALCDTL
Trigger: CAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 90 bp TTCTTCTGTCGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTGCTGCTaGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: FFCRCLSSFRRFRCC*SRSCNSSWKRALLG
Trigger: CCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACGACAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6
CDS CAA 72 bp CGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTGCTGCTaGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCA +
Preference number: 6 (lower is better)
Translates to: RCLSSFRRFRCC*SRSCNSSWKRA
Trigger: TGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036734.6