Pregenerated sensors for GADD45GIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033751Ensembl transcript IDs: ENSMUST00000036734.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATaGGCCGGGCGACCCAGGAAGTCACAACTTGAGGGAGAATGTGTA | + |
Preference number: 1 (lower is better) Translates to: EHSQVEGFSRPGVGE*AGRPRKSQLEGECV Trigger: TACACATTCTCCCTCAAGTTGTGACTTCCTGGGTCGCCCGGCTCATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR TCA 90 bp | CCTCCTTCCTCCACCATGATGAGGGGAAGCTGGAGCCCTAAGCTTTaGTCCTCTATTGGAGTGGCCCAGATCTTTCCATCTGGAGTAAGT | + |
Preference number: 1 (lower is better) Translates to: PPSSTMMRGSWSPKL*SSIGVAQIFPSGVS Trigger: ACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAAAGCTTAGGGCTCCAGCTTCCCCTCATCATGGTGGAGGAAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR GCA 90 bp | AATTACTGGAGATTAATGTTGGTAAACAGAAGCCTCCTCCTCTCCTaGCATCTGCTCCTTCATTATTTGCCCATCCATTCCCCTTTCTCT | + |
Preference number: 1 (lower is better) Translates to: NYWRLMLVNRSLLLS*HLLLHYLPIHSPFS Trigger: AGAGAAAGGGGAATGGATGGGCAAATAATGAAGGAGCAGATGGCAGGAGAGGAGGAGGCTTCTGTTTACCAACATTAATCTCCAGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR-3UTR TCA 90 bp | CTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGAGAAACGGGGAGGAGCCTAGGCAGGAAGTCACAACTTaGGGGAGAATGTGTAGAATA | + |
Preference number: 2 (lower is better) Translates to: LAGGTGEVGMLRNGEEPRQEVTT*GRMCRI Trigger: TATTCTACACATTCTCCCTCAAGTTGTGACTTCCTG...CCTAGGCTCCTCCCCGTTTCTCAGCATGCCCACTTCACCTGTGCCCCCGGCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR-3UTR GCA 90 bp | ACAGCTGTTTGTGAGTCTGAGCTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGTCCTCTCCTGCCATCTaGTCCTTCATTATTTGCCCA | + |
Preference number: 2 (lower is better) Translates to: TAVCESELAGGTGEVGMLSSPAI*SFIICP Trigger: TGGGCAAATAATGAAGGAGCAGATGGCAGGAGAGGA...CAGCATGCCCACTTCACCTGTGCCCCCGGCTAGCTCAGACTCACAAACAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR-3UTR CCA 90 bp | CCCCATTCCCATATCAGTCCGAGAAGACCTGGGCCAGACAGCTGTCCCCGTCCTCTACTCAAAAGTTGTTaGCAAGACCATGAGGCGACA | + |
Preference number: 2 (lower is better) Translates to: PHSHISPRRPGPDSCPRPLLKSC*QDHEAT Trigger: TGTCGCCTCATGGTCTTGCCAACAACTTTTGAGTAG...AGGACGGGGACAGCTGTCTGGCCCAGGTCTTCTCGGACTGATATGGGAATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR-3UTR GCA 90 bp | GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTCTGCTCCTTCTATCATaGAGTCTGTTTGGCTGTACT | + |
Preference number: 2 (lower is better) Translates to: VLKMSPNNGSCLLELLTALLLLS*SLFGCT Trigger: AGTACAGCCAAACAGACTGCATGATAGAAGGAGCAG...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR-3UTR CAA 90 bp | CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGATATCATGCAGTCTGTTaGGCTGTACTCCCCCTGGTA | + |
Preference number: 3 (lower is better) Translates to: PSPASHPPEVAPIPISVRYHAVC*AVLPLV Trigger: TACCAGGGGGAGTACAGCCAAACAGACTGCATGATA...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR TCA 72 bp | ACAGCCCAGCCTACTCAAAAGTTGTTGGCAAGACCATaGGGCGACAGATGGGCCCCTCTTGGCCTCTGTCCC | + |
Preference number: 3 (lower is better) Translates to: TAQPTQKLLARP*GDRWAPLGLCP Trigger: GGGACAGAGGCCAAGAGGGGCCCATCTGTCGCCTCATGGTCTTGCCAACAACTTTTGAGTAGGCTGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR TCA 72 bp | TCCACCATGATGAGGGGAAGCTGGAGCCCTAAGCTTTaGTCCTCTATTGGAGTGGCCCAGATCTTTCCATCT | + |
Preference number: 3 (lower is better) Translates to: STMMRGSWSPKL*SSIGVAQIFPS Trigger: AGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAAAGCTTAGGGCTCCAGCTTCCCCTCATCATGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR GCA 72 bp | AGCTCAACCCTAGAAGGACTGCTGCTCCTTCTATCATaGAGTCTGTTTGGCTGTACTCCCCCTGGTAATTGG | + |
Preference number: 3 (lower is better) Translates to: SSTLEGLLLLLS*SLFGCTPPGNW Trigger: CCAATTACCAGGGGGAGTACAGCCAAACAGACTGCATGATAGAAGGAGCAGCAGTCCTTCTAGGGTTGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR CCA 72 bp | TTGATCCTCTATTGGAGTGGCCCAGATCTTTCCATCTaGAGTAAGTCTATGTTAGAAGCCAAAGGCCTTCTC | + |
Preference number: 3 (lower is better) Translates to: LILYWSGPDLSI*SKSMLEAKGLL Trigger: GAGAAGGCCTTTGGCTTCTAACATAGACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATAGAGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR GCA 72 bp | AATAAAGTTTTAAAAATGAGCCCTAATAATGGTTCATaGCTACTGGAGCTTCTCACAGCTGTTTGTGAGTCT | + |
Preference number: 3 (lower is better) Translates to: NKVLKMSPNNGS*LLELLTAVCES Trigger: AGACTCACAAACAGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAACTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | GTGTCCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGCAGCTGCTCTGGGGTaGGCCACAGGGAGGCCGGGG | + |
Preference number: 4 (lower is better) Translates to: VSRCEHSQVEGFSRPGVGAAALG*ATGRPG Trigger: CCCCGGCCTCCCTGTGGCCCACCCCAGAGCAGCTGC...CCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | GTGTCCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGGGGCGCACGGTAGCTaGGGGACCTGGGACCCAGAG | + |
Preference number: 4 (lower is better) Translates to: VSRCEHSQVEGFSRPGVGGAHGS*GTWDPE Trigger: CTCTGGGTCCCAGGTCCCGCAGCTACCGTGCGCCCC...CCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGGACAC 67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | GAGTCTGAGCTAGCCGGGGGCACAGGTGAAGTGGGCATGCTGAGAAACGGGGAGCTCGCGCAGCTGCTCTaGGGTGGGCCACAGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: ESELAGGTGEVGMLRNGELAQLL*GGPQGG Trigger: GCCTCCCTGTGGCCCACCCCAGAGCAGCTGCGCGAG...CTCCCCGTTTCTCAGCATGCCCACTTCACCTGTGCCCCCGGCTAGCTCAGACTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | AGCCTTACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGAC | + |
Preference number: 4 (lower is better) Translates to: SLTDGPQHLLPLETWAPALASKA*CCKRSD Trigger: GTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAG...GGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTAAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | AGCCTTACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGC | + |
Preference number: 4 (lower is better) Translates to: SLTDGPQHLLPLETWAPALGHAL*DTLLPG Trigger: GCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAG...GGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTAAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | GGCCCCAGCATCTCCTCCCTCTGGAAACTTGGGCCCCTGCCTCAGCTCAACCCTGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACC | + |
Preference number: 4 (lower is better) Translates to: GPSISSLWKLGPLPQLNPAATLA*SLSSGT Trigger: GGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGC...AGGGTTGAGCTGAGGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGACTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCG | + |
Preference number: 4 (lower is better) Translates to: PSPASHPPEVAPIPISVRLGYHS*SSASNS Trigger: CGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAG...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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3UTR CAA 72 bp | TACAGACGGGCCCCAGCATCTCCTCCCTCTGGAAACTaGGGCCCCTGCCTCAGCTCAACCCTAGAAGGACTG | + |
Preference number: 4 (lower is better) Translates to: YRRAPASPPSGN*GPCLSSTLEGL Trigger: CAGTCCTTCTAGGGTTGAGCTGAGGCAGGGGCCCAAGTTTCCAGAGGGAGGAGATGCTGGGGCCCGTCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGAGACACTGCTGAGTCCTaGGCTTCAGCAGAGGCCATA | + |
Preference number: 4 (lower is better) Translates to: PSPASHPPEVAPIPISVRDTAES*ASAEAI Trigger: TATGGCCTCTGCTGAAGCCCAGGACTCAGCAGTGTC...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR TCA 90 bp | CCCAGCCCAGCTTCCCACCCTCCTGAAGTGGCCCCCATTCCCATATCAGTCCGACGCTCCTTGTCAGCCTaGATTTTCTCCCAGCGTTCT | + |
Preference number: 4 (lower is better) Translates to: PSPASHPPEVAPIPISVRRSLSA*IFSQRS Trigger: AGAACGCTGGGAGAAAATTCAGGCTGACAAGGAGCG...TCGGACTGATATGGGAATGGGGGCCACTTCAGGAGGGTGGGAAGCTGGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR TCA 90 bp | CCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATTTCACCAGACACTGCTaGGTCCTGGGCTTCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: PGVNTARWRDSPAQVLGNFTRHC*VLGFSR Trigger: TCTGCTGAAGCCCAGGACTCAGCAGTGTCTGGTGAA...ATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | CCAGGTGTGAACACAGCCAGGTGGAGGGATTCTCCCGCCCAGGTGTTGGGGAATTCCTGTAATAGTTCCTaGAAGCGAGCACTCCTTGGG | + |
Preference number: 4 (lower is better) Translates to: PGVNTARWRDSPAQVLGNSCNSS*KRALLG Trigger: CCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGA...ATTCCCCAACACCTGGGCGGGAGAATCCCTCCACCTGGCTGTGTTCACACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | TTTCTCTCTCCCCAAAGCCCCAGTTCATGGCATGGCCTAGTGTCCAGGTGTGAAGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCT | + |
Preference number: 4 (lower is better) Translates to: FLSPQSPSSWHGLVSRCEVASWP*TLRYAA Trigger: AGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCAC...TTCACACCTGGACACTAGGCCATGCCATGAACTGGGGCTTTGGGGAGAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | GCTAATTACTGGAGATTAATGTTGGTAAACAGAAGCCTCCTCCTCTCCTGCCATGAAGCGAGCACTCCTTaGGTCCACGTGGTAGCCCAG | + |
Preference number: 4 (lower is better) Translates to: ANYWRLMLVNRSLLLSCHEASTP*VHVVAQ Trigger: CTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTC...ATGGCAGGAGAGGAGGAGGCTTCTGTTTACCAACATTAATCTCCAGTAATTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTGGTAGCTGCGGGACCTaGGACCCAGAGCCACAGAGA | + |
Preference number: 4 (lower is better) Translates to: VLKMSPNNGSCLLELLTAGSCGT*DPEPQR Trigger: TCTCTGTGGCTCTGGGTCCCAGGTCCCGCAGCTACC...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR GCA 90 bp | GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGG | + |
Preference number: 4 (lower is better) Translates to: VLKMSPNNGSCLLELLTAKRSDS*MVAKLG Trigger: CCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTT...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CCA 90 bp | TATTGGAGTGGCCCAGATCTTTCCATCTGGAGTAAGTCTATGTTAGAAGCCAAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATAC | + |
Preference number: 4 (lower is better) Translates to: YWSGPDLSIWSKSMLEAKSFVAS*PCTLRY Trigger: GTATCGCAGAGTGCATGGCCAAGATGCCACAAATGA...TTTGGCTTCTAACATAGACTTACTCCAGATGGAAAGATCTGGGCCACTCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | CGGGTACCATTCTTGCTCCTCGGCCTCCAACTCGCGCAGCTGCTCTaGGGTGGGCCACAGGGAGGCCGGGGGCACCCCGGAGATGGCGCC | + |
Preference number: 5 (lower is better) Translates to: RVPFLLLGLQLAQLL*GGPQGGRGHPGDGA Trigger: GGCGCCATCTCCGGGGTGCCCCCGGCCTCCCTGTGGCCCACCCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | GCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTaGTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTAC | + |
Preference number: 5 (lower is better) Translates to: AIRCSLAWRLASKAC*CKRSDSCMVAKLGY Trigger: GTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | TCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGG | + |
Preference number: 5 (lower is better) Translates to: SAIRCSLAWRLASKA*CCKRSDSCMVAKLG Trigger: CCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | AAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCGCGCAGCTGCTCTGGGGTGGGCCAC | + |
Preference number: 5 (lower is better) Translates to: KRSDSCMVAKLGYHS*SSASNSRSCSGVGH Trigger: GTGGCCCACCCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | TGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: WRLASKACCCKRSDS*MVAKLGYHSCSSAS Trigger: GGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | TGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTaGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCT | + |
Preference number: 5 (lower is better) Translates to: CGILAMHSAIRCSLA*RLASKACCCKRSDS Trigger: AGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | ATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTaGAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTCGGGTACCAT | + |
Preference number: 5 (lower is better) Translates to: IRCSLAWRLASKACC*KRSDSCMVAKLGYH Trigger: ATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | TCATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTaGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCG | + |
Preference number: 5 (lower is better) Translates to: SFVASWPCTLRYAAP*LGALPPRPAAASAA Trigger: CGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | GCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGGCCTCCAACT | + |
Preference number: 5 (lower is better) Translates to: ALPPRPAAASAATLA*SLSSGTILAPRPPT Trigger: AGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | TTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTaGTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAG | + |
Preference number: 5 (lower is better) Translates to: FSIICGILAMHSAIR*SLAWRLASKACCCK Trigger: CTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | CTTTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTG | + |
Preference number: 5 (lower is better) Translates to: LSPVFNHLWHLGHAL*DTLLPGLAPCLQGL Trigger: CAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CAA 90 bp | GAAGTGGGCATGCTGAGAAACGGGGAGGAGCCTAGGAGCCTTACAGACGGGCCCATCATTTGTGGCATCTaGGCCATGCACTCTGCGATA | + |
Preference number: 5 (lower is better) Translates to: EVGMLRNGEEPRSLTDGPIICGI*AMHSAI Trigger: TATCGCAGAGTGCATGGCCAAGATGCCACAAATGAT...GGGCCCGTCTGTAAGGCTCCTAGGCTCCTCCCCGTTTCTCAGCATGCCCACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CAA 90 bp | CAGCTCAACCCTAGAAGGACTGCTGCTCCTTCTATCATGCAGTCTGTTTGGCTGGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCA | + |
Preference number: 5 (lower is better) Translates to: QLNPRRTAAPSIMQSVWLGSEHS*GPRGSP Trigger: TGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCC...CAGCCAAACAGACTGCATGATAGAAGGAGCAGCAGTCCTTCTAGGGTTGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | GCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: ASAFASFQSFVASWP*TLRYAAPWLGALPP Trigger: TGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | GTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTG | + |
Preference number: 5 (lower is better) Translates to: VLASAFASFQSFVAS*PCTLRYAAPWLGAL Trigger: CAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 90 bp | CTCCCAGCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTaGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: LPAFSLLLSPVFNHL*HLGHALCDTLLPGL Trigger: CAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 90 bp | GCCTCCTTCTTCTGTCGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTaGTGCTTGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTC | + |
Preference number: 5 (lower is better) Translates to: ASFFCRCLSSFRRFR*CLSRSCNSSWKRAL Trigger: GAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACGACAGAAGAAGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CAA 90 bp | TTTCTCTCTCCCCAAAGCCCCAGTTCATGGCATGGCCTAGTGTCCAGGTGTGAACCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCA | + |
Preference number: 5 (lower is better) Translates to: FLSPQSPSSWHGLVSRCEPVFNH*WHLGHA Trigger: TGCATGGCCAAGATGCCACAAATGATTGAAAACTGG...TTCACACCTGGACACTAGGCCATGCCATGAACTGGGGCTTTGGGGAGAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS-3UTR CAA 90 bp | GTTTTAAAAATGAGCCCTAATAATGGTTCATGCCTACTGGAGCTTCTCACAGCTGCTCGGGTACCATTCTaGCTCCTCGGCCTCCAACTC | + |
Preference number: 5 (lower is better) Translates to: VLKMSPNNGSCLLELLTAARVPF*LLGLQL Trigger: GAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGC...AGCTGTGAGAAGCTCCAGTAGGCATGAACCATTATTAGGGCTCATTTTTAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 72 bp | GCACCCCGGAGATGGCGCCATGTCGTCCGAACTGCTTaGCCACATAGCGGGGCGTTAGCTGCCATCGCGGGG | + |
Preference number: 6 (lower is better) Translates to: APRRWRHVVRTA*PHSGALAAIAG Trigger: CCCCGCGATGGCAGCTAACGCCCCGCTATGTGGCCAAGCAGTTCGGACGACATGGCGCCATCTCCGGGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | CGCTGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTaGTGCTGCAAGCGCAGCGACTCTTGCATGGTCGCT | + |
Preference number: 6 (lower is better) Translates to: RCSLAWRLASKA*CCKRSDSCMVA Trigger: AGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | GCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTTaGCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTC | + |
Preference number: 6 (lower is better) Translates to: ALCDTLLPGLAP*LQGLLLQAQRL Trigger: GAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 72 bp | TTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTaGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGC | + |
Preference number: 6 (lower is better) Translates to: LAMHSAIRCSLA*RLASKACCCKR Trigger: GCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | TGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTaGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACT | + |
Preference number: 6 (lower is better) Translates to: CTLRYAAPWLGA*PPRPAAASAAT Trigger: AGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | CTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTaGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCG | + |
Preference number: 6 (lower is better) Translates to: LGHALCDTLLPG*APCLQGLLLQA Trigger: CGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | TCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTaGAAGCGCAGCGACTCTTGCATGGTCGCTAAGCTC | + |
Preference number: 6 (lower is better) Translates to: SLAWRLASKACC*KRSDSCMVAKL Trigger: GAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | TGCTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGCTaGTGCAAGCGCAGCGACTCTTGCATGGTCGCTAAG | + |
Preference number: 6 (lower is better) Translates to: CSLAWRLASKAC*CKRSDSCMVAK Trigger: CTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 72 bp | GCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTaGCTTGGCGCCTTGCCTCCAAGGCCTGCTGCTGCA | + |
Preference number: 6 (lower is better) Translates to: ASWPCTLRYAAP*LGALPPRPAAA Trigger: TGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 90 bp | TTGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTaGGCGCCTTGCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTC | + |
Preference number: 6 (lower is better) Translates to: LWHLGHALCDTLLPG*APCLQGLLLQAQRL Trigger: GAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | GACTCTTGCATGGTCGCTAAGCTCGGGTACCATTCTTaGTCCTCGGCCTCCAACTCGCGCAGCTGCTCTGGG | + |
Preference number: 6 (lower is better) Translates to: DSCMVAKLGYHS*SSASNSRSCSG Trigger: CCCAGAGCAGCTGCGCGAGTTGGAGGCCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | GCCTCCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTaGATGGTCGCTAAGCTCGGGTACCATTCTTGCTCC | + |
Preference number: 6 (lower is better) Translates to: ASKACCCKRSDS*MVAKLGYHSCS Trigger: GGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | ATTTGTGGCATCTTGGCCATGCACTCTGCGATACGCTaGTCCCTGGCTTGGCGCCTTGCCTCCAAGGCCTGC | + |
Preference number: 6 (lower is better) Translates to: ICGILAMHSAIR*SLAWRLASKAC Trigger: GCAGGCCTTGGAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 72 bp | CCAAGGCCTGCTGCTGCAAGCGCAGCGACTCTTGCATaGTCGCTAAGCTCGGGTACCATTCTTGCTCCTCGG | + |
Preference number: 6 (lower is better) Translates to: PRPAAASAATLA*SLSSGTILAPR Trigger: CCGAGGAGCAAGAATGGTACCCGAGCTTAGCGACCATGCAAGAGTCGCTGCGCTTGCAGCAGCAGGCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | CTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCAGGCGTTCCTGGGCCT | + |
Preference number: 6 (lower is better) Translates to: LGPVIVPGSEHS*GPRGSPGVPGP Trigger: AGGCCCAGGAACGCCTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 90 bp | GCTGCTTGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTaGGGTCCACGTGGTAGCCCAGGCGTTCCTGGGCCTCAGCCTGTA | + |
Preference number: 6 (lower is better) Translates to: AACLGPVIVPGSEHS*GPRGSPGVPGPQPV Trigger: TACAGGCTGAGGCCCAGGAACGCCTGGGCTACCACGTGGACCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | GTTTTCAATCATTTGTGGCATCTTGGCCATGCACTCTaGGATACGCTGCTCCCTGGCTTGGCGCCTTGCCTC | + |
Preference number: 6 (lower is better) Translates to: VFNHLWHLGHAL*DTLLPGLAPCL Trigger: GAGGCAAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS GCA 72 bp | TTCGCCAGTTTTCAATCATTTGTGGCATCTTGGCCATaGACTCTGCGATACGCTGCTCCCTGGCTTGGCGCC | + |
Preference number: 6 (lower is better) Translates to: FASFQSFVASWP*TLRYAAPWLGA Trigger: GGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 90 bp | CGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTaGGCCATGCACTCTGCGATACGCTGCTCCCTGGCTTGGCGCCTT | + |
Preference number: 6 (lower is better) Translates to: RSRFCFRQFSIICGI*AMHSAIRCSLAWRL Trigger: AAGGCGCCAAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 90 bp | TTTCTCCCAGCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCACTCTGCGATACGCTGCTCCCTGGC | + |
Preference number: 6 (lower is better) Translates to: FLPAFSLLLSPVFNH*WHLGHALCDTLLPG Trigger: GCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGCTGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CCA 72 bp | TCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTTaGCCATGCACTCTGCGATACGCTGCTCCCTGGCTT | + |
Preference number: 6 (lower is better) Translates to: SAFASFQSFVAS*PCTLRYAAPWL Trigger: AAGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | TTCTGCTTTCGCCAGTTTTCAATCATTTGTGGCATCTaGGCCATGCACTCTGCGATACGCTGCTCCCTGGCT | + |
Preference number: 6 (lower is better) Translates to: FCFRQFSIICGI*AMHSAIRCSLA Trigger: AGCCAGGGAGCAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | GCGTTCTCGCTTCTGCTTTCGCCAGTTTTCAATCATTaGTGGCATCTTGGCCATGCACTCTGCGATACGCTG | + |
Preference number: 6 (lower is better) Translates to: AFSLLLSPVFNH*WHLGHALCDTL Trigger: CAGCGTATCGCAGAGTGCATGGCCAAGATGCCACAAATGATTGAAAACTGGCGAAAGCAGAAGCGAGAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 90 bp | TTCTTCTGTCGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTGCTGCTaGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCACTCCTTGGG | + |
Preference number: 6 (lower is better) Translates to: FFCRCLSSFRRFRCC*SRSCNSSWKRALLG Trigger: CCCAAGGAGTGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACGACAGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |
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CDS CAA 72 bp | CGTTGTCTTTCTTCCTTTAGGCGCTTTCGTTGCTGCTaGTCTAGGTCCTGTAATAGTTCCTGGAAGCGAGCA | + |
Preference number: 6 (lower is better) Translates to: RCLSSFRRFRCC*SRSCNSSWKRA Trigger: TGCTCGCTTCCAGGAACTATTACAGGACCTAGACAAGCAGCAACGAAAGCGCCTAAAGGAAGAAAGACAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036734.6 |