Pregenerated sensors for GAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026787Ensembl transcript IDs: ENSMUST00000028123.4
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGCAGGCCGCCGGGAAGCAGAGTGGACGAGCTTGCCTGGATCTaGGTCCAAGCTGGGCTTGCCTGGCTTCTAGACAGGGTCTGCGAG | + |
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Preference number: 1 (lower is better) Translates to: ESRPPGSRVDELAWI*VQAGLAWLLDRVCE Trigger: CTCGCAGACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGGCCTGCTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 90 bp | TTGGTTGAAAGCAGGCCGCCGGGAAGCAGAGTGGACGAGCTTGCCTaGATCTGGGTCCAAGCTGGGCTTGCCTGGCTTCTAGACAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LVESRPPGSRVDELA*IWVQAGLAWLLDRV Trigger: GACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGGCCTGCTTTCAACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | GTAGGCCCTTCTGCCTTCTCTAAGCGGGACACTCGGTTTGATAAGTaGGTCTCTGCCCGGGAAGTGAGATCTGTGGGCCTGAGGCACAAG | + |
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Preference number: 1 (lower is better) Translates to: VGPSAFSKRDTRFDK*VSAREVRSVGLRHK Trigger: CTTGTGCCTCAGGCCCACAGATCTCACTTCCCGGGCAGAGACTCACTTATCAAACCGAGTGTCCCGCTTAGAGAAGGCAGAAGGGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR GCA 90 bp | AAGCAGAGTGGACGAGCTTGCCTGGATCTGGGTCCAAGCTGGGCTTaGCTGGCTTCTAGACAGGGTCTGCGAGGTCAACTAGTGCAACAT | + |
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Preference number: 1 (lower is better) Translates to: KQSGRACLDLGPSWA*LASRQGLRGQLVQH Trigger: ATGTTGCACTAGTTGACCTCGCAGACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 90 bp | GAGCATCTGGGATGCAAACGACCCTTTCCCCAGACAGTAGCAAAATaGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGGTCTCGACT | + |
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Preference number: 1 (lower is better) Translates to: EHLGCKRPFPQTVAK*HLGGSHSCHTEVST Trigger: AGTCGAGACCTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGGAAAGGGTCGTTTGCATCCCAGATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | GAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAATTTaGAGAAGAGAGCATCTGGGATGCAAACGACCCTTTCCCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: ESSRRDFKVWDGEGI*RREHLGCKRPFPQT Trigger: TGTCTGGGGAAAGGGTCGTTTGCATCCCAGATGCTCTCTTCTTCAAATTCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | ATATGGTTTGAAAAGACACTTCAAGAACTAATATCAACCTTTGGTTaGAAGCAGGCCGCCGGGAAGCAGAGTGGACGAGCTTGCCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: IWFEKTLQELISTFG*KQAAGKQSGRACLD Trigger: ATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGGCCTGCTTTCAACCAAAGGTTGATATTAGTTCTTGAAGTGTCTTTTCAAACCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | TGTCCTGTTACTATATTTACACCTGTGCATCCTTTGTCCATGTTCTaGGGAGCAGCACCTTCTCCAAGACCCTGTAGAGTCAATACCTGC | + |
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Preference number: 1 (lower is better) Translates to: CPVTIFTPVHPLSMF*GAAPSPRPCRVNTC Trigger: GCAGGTATTGACTCTACAGGGTCTTGGAGAAGGTGCTGCTCCTCAGAACATGGACAAAGGATGCACAGGTGTAAATATAGTAACAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR GCA 90 bp | TTTCATCCCATTTTCCTTAGCACTCTCCTGAGTGGATGGCAGAGCTaGTGTAGAGGATCTATTAAAGTACTGGGCATGCATGTACCTCCT | + |
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Preference number: 1 (lower is better) Translates to: FHPIFLSTLLSGWQS*CRGSIKVLGMHVPP Trigger: AGGAGGTACATGCATGCCCAGTACTTTAATAGATCCTCTACAGCAGCTCTGCCATCCACTCAGGAGAGTGCTAAGGAAAATGGGATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | GCCATCACACAGTTGTCAAAGAGATTTCTTAGGGTGGGACTTAGTTaGGGTTATGTTTTCTCTAAGAGCCAATGGAGAGGGCACACAGCT | + |
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Preference number: 1 (lower is better) Translates to: AITQLSKRFLRVGLS*GYVFSKSQWRGHTA Trigger: AGCTGTGTGCCCTCTCCATTGGCTCTTAGAGAAAACATAACCTCAACTAAGTCCCACCCTAAGAAATCTCTTTGACAACTGTGTGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | CAGCAGCCTGTGACGCTCCATAATTGGTTTCTCTGGCCTCAGAGATaGAGCATTTTGTGTGCCATCACACAGTTGTCAAAGAGATTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QQPVTLHNWFLWPQR*SILCAITQLSKRFL Trigger: AAGAAATCTCTTTGACAACTGTGTGATGGCACACAAAATGCTTCATCTCTGAGGCCAGAGAAACCAATTATGGAGCGTCACAGGCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | GTGGGTCTTGATGGGAGGCAGATAAAAGAAGTTCTTAGGCTACCTTaGAATTGCTTGCATGAGGAACTCATTTCAGGAAAGGAAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: VGLDGRQIKEVLRLP*NCLHEELISGKEKS Trigger: GCTCTTTTCCTTTCCTGAAATGAGTTCCTCATGCAAGCAATTTCAAGGTAGCCTAAGAACTTCTTTTATCTGCCTCCCATCAAGACCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 90 bp | CACACACACACACGATTTTCTTTCTTCAAATCCTGTGACAGAACATaGAGTCTATACCACTTAGAAGTCTTAGATAAACACATACTGCAC | + |
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Preference number: 1 (lower is better) Translates to: HTHTRFSFFKSCDRT*SLYHLEVLDKHILH Trigger: GTGCAGTATGTGTTTATCTAAGACTTCTAAGTGGTATAGACTTCATGTTCTGTCACAGGATTTGAAGAAAGAAAATCGTGTGTGTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR GCA 90 bp | TCAATACAACTACCACATAGAAGAAGACACACTGGTAATACATTGTaGAAGTTTTTACAGCAACACATGTTGTTTTGCAACACCACACAA | + |
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Preference number: 1 (lower is better) Translates to: SIQLPHRRRHTGNTL*KFLQQHMLFCNTTQ Trigger: TTGTGTGGTGTTGCAAAACAACATGTGTTGCTGTAAAAACTTGCACAATGTATTACCAGTGTGTCTTCTTCTATGTGGTAGTTGTATTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGCTGGGATTAAAGGCATaGGCCACCACCACCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: PQTVAKWHLGGSHSCHTELGLKA*ATTTPL Trigger: CAGTGGGGTGGTGGTGGCGCATGCCTTTAATCCCAG...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGGATCTGGGTCCAAGCTaGGCTTGCCTGGCTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: PQTVAKWHLGGSHSCHTEDLGPS*ACLASR Trigger: TCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATC...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAGTCTACCTAGAGAACTaGAACAGTTTGATGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SGGRESSRRDFKVWDGEGVYLEN*NSLMSE Trigger: CTCACTCATCAAACTGTTTCAGTTCTCTAGGTAGAC...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CAA 90 bp | CCATTAGGGAGTGCTGACCTACTTCATGACACTCTGGTGTACAGGTaGTTTTCTTTTTGGCTGTCTAGACAGCAAGGGCCCAAAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: PLGSADLLHDTLVYR*FSFWLSRQQGPKAT Trigger: TGTAGCTTTGGGCCCTTGCTGTCTAGACAGCCAAAAAGAAAACAACCTGTACACCAGAGTGTCATGAAGTAGGTCAGCACTCCCTAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCGTTCCTGTATCTTTCTaGGTACCAAAATGCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: LGMHVPPFLGYRMRRFACVPVSF*VPKCPS Trigger: GGATGGGCATTTTGGTACTCAGAAAGATACAGGAAC...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGGTCCAAGCTGGGCTTaGCTGGCTTCTAGACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSGPSWA*LASRQG Trigger: ACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCGGAGAAGAAGGGGATTaGAGATCCAATTCACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LGMHVPPFLGYRMRRFACGEEGD*RSNSLA Trigger: TGCTAGTGAATTGGATCTCCAATCCCCTTCTTCTCC...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGTGTGTGTGTTTGCTTTaGAATACTAGCTTTAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PQTVAKWHLGGSHSCHTECVCLL*NTSFRD Trigger: ATCCCTAAAGCTAGTATTTCAAAGCAAACACACACA...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCCTTAGCACTCTCCTaGGTGGATGGCAGAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSSLALS*VDGRAA Trigger: AGCAGCTCTGCCATCCACTCAGGAGAGTGCTAAGGA...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCACCAGAGAACCTTTTATaGTTCAAGGGTGATTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPPENLL*FKGDLA Trigger: TGCCAAATCACCCTTGAATCATAAAAGGTTCTCTGG...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGTTGCTAGGGCTGATTTaGTTTTATTTTCACCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PQTVAKWHLGGSHSCHTELLGLI*FYFHPF Trigger: AAAAGGGTGAAAATAAAACCAAATCAGCCCTAGCAA...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCACATTTACACAGTTTGTaGCAACTTAGCTGTCTACCT | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPHLHSL*QLSCLP Trigger: AGGTAGACAGCTAAGTTGTCACAAACTGTGTAAATG...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCTTATGTTTCATATCTaGCTCTGCAGTCTGTATAAC | + |
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Preference number: 2 (lower is better) Translates to: LGMHVPPFLGYRMRRFACLMFHI*LCSLYN Trigger: GTTATACAGACTGCAGAGGCAGATATGAAACATAAG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCACCCATCCATATGGAGTaGGAGAATGCTTCCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSPIHME*ENASRL Trigger: CAGTCTGGAAGCATTCTCCCACTCCATATGGATGGG...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAAGATCTGTTCATCTGTaGCTTAAAGTTATCATGGGA | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPRSVHL*LKVIMG Trigger: TCCCATGATAACTTTAAGTCACAGATGAACAGATCT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCGGGTTTAATATTCTGTaGTTATCACACTTAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LGMHVPPFLGYRMRRFACGFNIL*LSHLRS Trigger: ACTCCTTAAGTGTGATAAGCACAGAATATTAAACCC...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCATACCTTGAAATTGCTTaGATGAGGAACTCATTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPYLEIA*MRNSFQ Trigger: CTGAAATGAGTTCCTCATGCAAGCAATTTCAAGGTA...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCATACTTCATGACACTCTaGTGTACAGGTTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPYFMTL*CTGCFL Trigger: AAGAAAACAACCTGTACACCAGAGTGTCATGAAGTA...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAAGGAAAAGAGCCACATaGGATAGTAATTCATTACTA | + |
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Preference number: 2 (lower is better) Translates to: LHIYSQQPGSRKESYACPRKRAT*DSNSLL Trigger: TAGTAATGAATTACTATCCCATGTGGCTCTTTTCCT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAAGGTTGTTTTCTTTTTaGCTGTCTAGACAGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSRLFSF*LSRQQG Trigger: CCCTTGCTGTCTAGACAGCCAAAAAGAAAACAACCT...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCTATCATGGGAGCTGTTaGTCATTCTCCATCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIYHGSC*SFSIQF Trigger: AAACTGGATGGAGAATGATCAACAGCTCCCATGATA...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGATCTATTAAAGTACTaGGCATGCATGTACCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSDLLKY*ACMYLL Trigger: AAGGAGGTACATGCATGCCCAGTACTTTAATAGATC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CAA 90 bp | AGACACACTGGTAATACATTGTGCAAGTTTTTACAGCAACACATGTaGTTTTGCAACACCACACAATTCAATATAAAGTGCACAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: RHTGNTLCKFLQQHM*FCNTTQFNIKCTTS Trigger: TGAGGTTGTGCACTTTATATTGAATTGTGTGGTGTTGCAAAACAACATGTGTTGCTGTAAAAACTTGCACAATGTATTACCAGTGTGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGACTTAAAGTTATCATaGGAGCTGTTGATCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: GPTFNIVSLHYYSIITLSDLKLS*ELLIIL Trigger: GAGAATGATCAACAGCTCCCATGATAACTTTAAGTC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCAACTGTACTCTACTGTaGCACCACGATATAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: TNVQYSLPPLLLHYYSFINCTLL*HHDIEI Trigger: TATTTCTATATCGTGGTGTCACAGTAGAGTACAGTT...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR-3UTR CCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCGATTCAAGGGTGATTTaGCACTATTTATTACTACTG | + |
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Preference number: 2 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIDSRVI*HYLLLL Trigger: CAGTAGTAATAAATAGTGCCAAATCACCCTTGAATC...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 72 bp | CCGCCGGGAAGCAGAGTGGACGAGCTTGCCTGGATCTaGGTCCAAGCTGGGCTTGCCTGGCTTCTAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: PPGSRVDELAWI*VQAGLAWLLDR Trigger: CCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 72 bp | AGCAGGCCGCCGGGAAGCAGAGTGGACGAGCTTGCCTaGATCTGGGTCCAAGCTGGGCTTGCCTGGCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SRPPGSRVDELA*IWVQAGLAWLL Trigger: TAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGGCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 72 bp | CAGAGTGGACGAGCTTGCCTGGATCTGGGTCCAAGCTaGGCTTGCCTGGCTTCTAGACAGGGTCTGCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QSGRACLDLGPS*ACLASRQGLRG Trigger: ACCTCGCAGACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR GCA 72 bp | GGACGAGCTTGCCTGGATCTGGGTCCAAGCTGGGCTTaGCTGGCTTCTAGACAGGGTCTGCGAGGTCAACTA | + |
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Preference number: 3 (lower is better) Translates to: GRACLDLGPSWA*LASRQGLRGQL Trigger: TAGTTGACCTCGCAGACCCTGTCTAGAAGCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR CCA 72 bp | GGAAGTGAGATCTGTGGGCCTGAGGCACAAGATGGATaGGCAGCTGCATATTTACTCTCAGCAGCCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GSEICGPEAQDG*AAAYLLSAARF Trigger: GAACCTGGCTGCTGAGAGTAAATATGCAGCTGCCCATCCATCTTGTGCCTCAGGCCCACAGATCTCACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 72 bp | GGACAGGGCCTTCTTTCTTCTGTTCCTGTATCTTTCTaGGTACCAAAATGCCCATCCATATGGAGTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GQGLLSSVPVSF*VPKCPSIWSGR Trigger: TCTCCCACTCCATATGGATGGGCATTTTGGTACTCAGAAAGATACAGGAACAGAAGAAAGAAGGCCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR TCA 72 bp | ACTATATTTACACCTGTGCATCCTTTGTCCATGTTCTaGGGAGCAGCACCTTCTCCAAGACCCTGTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: TIFTPVHPLSMF*GAAPSPRPCRV Trigger: GACTCTACAGGGTCTTGGAGAAGGTGCTGCTCCTCAGAACATGGACAAAGGATGCACAGGTGTAAATATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| 3UTR GCA 72 bp | GAGGTCTCGACTCCCATGACTGGGTTTAATATTCTGTaGTTATCACACTTAAGGAGTGTGCTGTACCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EVSTPMTGFNIL*LSHLRSVLYPS Trigger: AGAGGGGTACAGCACACTCCTTAAGTGTGATAAGCACAGAATATTAAACCCAGTCATGGGAGTCGAGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR TCA 72 bp | GTGACGCTCCATAATTGGTTTCTCTGGCCTCAGAGATaGAGCATTTTGTGTGCCATCACACAGTTGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VTLHNWFLWPQR*SILCAITQLSK Trigger: CTTTGACAACTGTGTGATGGCACACAAAATGCTTCATCTCTGAGGCCAGAGAAACCAATTATGGAGCGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR GCA 72 bp | ATTTTCCTTAGCACTCTCCTGAGTGGATGGCAGAGCTaGTGTAGAGGATCTATTAAAGTACTGGGCATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IFLSTLLSGWQS*CRGSIKVLGMH Trigger: ATGCATGCCCAGTACTTTAATAGATCCTCTACAGCAGCTCTGCCATCCACTCAGGAGAGTGCTAAGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CCA 72 bp | ATCTTTCTGAGTACCAAAATGCCCATCCATATGGAGTaGGAGAATGCTTCCAGACTGGTACTTGCCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: IFLSTKMPIHME*ENASRLVLAFC Trigger: GCAAAAGGCAAGTACCAGTCTGGAAGCATTCTCCCACTCCATATGGATGGGCATTTTGGTACTCAGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCTTCCAGACTGGTACTaGCCTTTTGCATGTAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGMHVPPFLGYRMRRFACLPDWY*PFACKS Trigger: ACTTTTACATGCAAAAGGCAAGTACCAGTCTGGAAG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCACTCTGGTGTACAGGTaGTTTTCTTTTTGGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGMHVPPFLGYRMRRFACTLVYR*FSFWLS Trigger: AGACAGCCAAAAAGAAAACAACCTGTACACCAGAGT...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCAGGCTCCTAGAAATTTaGAGGAAGAATCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGMHVPPFLGYRMRRFACRLLEI*RKNLEK Trigger: CTTCTCCAGATTCTTCCTCAAAATTTCTAGGAGCCT...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR GCA 72 bp | CCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATaGCCGAGCAAGGCTCCTAGAAATTTTGAGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PPFLGYRMRRFA*PSKAPRNFEEE Trigger: TTCTTCCTCAAAATTTCTAGGAGCCTTGCTCGGGCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CCA 72 bp | GTGCCATCACACAGTTGTCAAAGAGATTTCTTAGGGTaGGACTTAGTTGAGGTTATGTTTTCTCTAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VPSHSCQRDFLG*DLVEVMFSLRA Trigger: GGCTCTTAGAGAAAACATAACCTCAACTAAGTCCCACCCTAAGAAATCTCTTTGACAACTGTGTGATGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAAATATCAACCTTTGGTaGAAAGCAGGCCGCCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPTFNIVSLHYYSIITLSNINLW*KAGRRE Trigger: TTCCCGGCGGCCTGCTTTCAACCAAAGGTTGATATT...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGGATGGAGAAGGAATTaGAAGAAGAGAGCATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPTFNIVSLHYYSIITLSGWRRN*KKRASG Trigger: CCCAGATGCTCTCTTCTTCAAATTCCTTCTCCATCC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR TCA 72 bp | TCACTGTACCCCAGAGAACCTTTTATGATTCAAGGGTaGTTTGGCACTATTTATTACTACTGCTCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLYPREPFMIQG*FGTIYYYCSEV Trigger: CACTTCAGAGCAGTAGTAATAAATAGTGCCAAATCACCCTTGAATCATAAAAGGTTCTCTGGGGTACAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR TCA 72 bp | TCCATAGTTCTACCAGCACTTAGATCTGTTCATCTGTaGCTTAAAGTTATCATGGGAGCTGTTGATCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SIVLPALRSVHL*LKVIMGAVDHS Trigger: AGAATGATCAACAGCTCCCATGATAACTTTAAGTCACAGATGAACAGATCTAAGTGCTGGTAGAACTATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR GCA 72 bp | ACATTGTGCAAGTTTTTACAGCAACACATGTTGTTTTaGAACACCACACAATTCAATATAAAGTGCACAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLCKFLQQHMLF*NTTQFNIKCTT Trigger: GGTTGTGCACTTTATATTGAATTGTGTGGTGTTGCAAAACAACATGTGTTGCTGTAAAAACTTGCACAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR TCA 72 bp | ACACGATTTTCTTTCTTCAAATCCTGTGACAGAACATaGAGTCTATACCACTTAGAAGTCTTAGATAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TRFSFFKSCDRT*SLYHLEVLDKH Trigger: GTGTTTATCTAAGACTTCTAAGTGGTATAGACTTCATGTTCTGTCACAGGATTTGAAGAAAGAAAATCGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CAA 72 bp | TTGAAAGCAGGCCGCCGGGAAGCAGAGTGGACGAGCTaGCCTGGATCTGGGTCCAAGCTGGGCTTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGRREAEWTS*PGSGSKLGLPG Trigger: GCCAGGCAAGCCCAGCTTGGACCCAGATCCAGGCAAGCTCGTCCACTCTGCTTCCCGGCGGCCTGCTTTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAGATGAGCCTGGGCACTaGTGCCATCCCCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRESSRRDFKVWDGEGDEPGH*CHPLLL Trigger: AAGGAGAAGGGGATGGCAGCAGTGCCCAGGCTCATC...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCCGCCCGTGAACTTTTaGGCCACCTGGCACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACPPVNF*ATWHHA Trigger: AGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCATTCCGATGCCGCCCGTaGACTTTTGGGCCACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPFRCRP*TFGPPG Trigger: GCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAA...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGGCATGGCATACATGTTaGAGATGGCGCCACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQTVAKWHLGGSHSCHTEAWHTC*RWRHQE Trigger: CTCCTGGTGGCGCCATCTCCAACATGTATGCCATGC...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGACTGCAGCTCCCTTCTTaGGAGAAAAGTGACTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRESSRRDFKVWDGEGLQLPS*EKSDYA Trigger: AGCATAGTCACTTTTCTCTCAAGAAGGGAGCTGCAG...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCAGGCGACCTTCCCGGTaGCGGCCCGCGAGGTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIRRPSR*RPARSR Trigger: GCGTGACCTCGCGGGCCGCCACCGGGAAGGTCGCCT...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCAAGCCCCATACACGGTaGTTCCAGCTGTGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACKPHTR*FQLWHS Trigger: TGAGTGCCACAGCTGGAACCACCGTGTATGGGGCTT...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCATCTAACCAGGAGAGCTaGACACTGCAAGGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPSNQES*TLQGDT Trigger: GGTGTCCCCTTGCAGTGTTCAGCTCTCCTGGTTAGA...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCTGGCAGCAGGTCTGTTaGGTGCAGAAACGCGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACWQQVC*VQKRVV Trigger: AACTACGCGTTTCTGCACGCAACAGACCTGCTGCCA...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAATTTTGCGGTTGGTCTaGCAATTCCCAATTATACTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGRESSRRDFKVWDGEGILRLV*QFPIIL Trigger: GAGTATAATTGGGAATTGGCAGACCAACCGCAAAAT...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCTCCATGTCACAGAGTTaGCCCTCTCTACTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACSMSQS*PSLLHS Trigger: TGAGTGGAGTAGAGAGGGCCAACTCTGTGACATGGA...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGAGCCTGGGCACTGCTaGCATCCCCTTCTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSEPGHC*HPLLLD Trigger: GTCAAGGAGAAGGGGATGGCAGCAGTGCCCAGGCTC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAGTAGAAATGCCAGAGTaGGCCTTTCTCCATCACACG | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPVEMPE*AFLHHT Trigger: CGTGTGATGGAGAAAGGCCCACTCTGGCATTTCTAC...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCCATCCCCTTCTCCTTaGCTTCTGGAAACATCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACPSPSP*LLETSY Trigger: ATAAGATGTTTCCAGAAGTCAAGGAGAAGGGGATGG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAACACCCATCATCTTGTaGGGATTCCATGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPTPIIL*GFHVTE Trigger: CTCTGTGACATGGAATCCTCACAAGATGATGGGTGT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAAAGTCAATGTCTTGGTaGGTTGCTGCAGGGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPKSMSW*VAAGFE Trigger: CTCAAACCCTGCAGCAACTCACCAAGACATTGACTT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CCCCAGACAGTAGCAAAATGGCATCTGGGAGGAAGCCATTCTTGTCATACAGAGCTTGAAGAAGCTCATTaGGGTAATGGAAATCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTVAKWHLGGSHSCHTELEEAH*GNGNRS Trigger: TGATCGATTTCCATTACCCCAATGAGCTTCTTCAAG...CTCTGTATGACAAGAATGGCTTCCTCCCAGATGCCATTTTGCTACTGTCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CAA 72 bp | GAAGATTTGCATGCCCGAGCAAGGCTCCTAGAAATTTaGAGGAAGAATCTGGAGAAGAAGGGGATTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDLHARARLLEI*RKNLEKKGIGD Trigger: ATCTCCAATCCCCTTCTTCTCCAGATTCTTCCTCAAAATTTCTAGGAGCCTTGCTCGGGCATGCAAATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGCAGAAACGCGTAGTTaGCATCCCCTTTGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSAETRS*HPLWGS Trigger: ACTGCCCCAAAGGGGATGTCAACTACGCGTTTCTGC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAACATGGCGTCCACACTaGAAGGCCTTGTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSTWRPH*KALSPV Trigger: CACAGGAGACAAGGCCTTGCAGTGTGGACGCCATGT...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATTCTCCATCACACGCTaGCAGCAGGTCTGTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSFSITR*QQVCCV Trigger: CACGCAACAGACCTGCTGCCAGCGTGTGATGGAGAA...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCACTTCTCCTTGACTTCTaGAAACATCTTATAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHIYSQQPGSRKESYACPLLLDF*KHLIAG Trigger: GCCCGCTATAAGATGTTTCCAGAAGTCAAGGAGAAG...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCACGGTGGTTCCAGCTGTaGCACTCACCAGGAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSRWFQL*HSPGKE Trigger: TTCCTTTCCTGGTGAGTGCCACAGCTGGAACCACCG...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCAGAGTTGTTTGGCAATaGGTCAAAATTTCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGMHVPPFLGYRMRRFACRVVWQ*VKISSR Trigger: TCTGGAGGAAATTTTGACGCATTGCCAAACAACTCT...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCCTAAGGGTTGGTAGCTaGCCATTGTGGTCCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFILRVGS*PLWSHT Trigger: AGTATGGGACCACAATGGTCAGCTACCAACCCTTAG...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCATCTGGTTGCAGCTCTaGATCAGTCCCTCCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIIWLQL*ISPSSL Trigger: TAGAGAGGAGGGACTGATGCAGAGCTGCAACCAGAT...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCACATACATGTTGGAGATaGCGCCACCAGGAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSHTCWR*RHQEKR Trigger: TCTTTTCTCCTGGTGGCGCCATCTCCAACATGTATG...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCGTTAGTGTTTGCTGTTaGTGTCAACCAGTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIVSVCC*CQPVCC Trigger: GCAGCAGACTGGTTGACATCAACAGCAAACACTAAC...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCTCTTATAGCGGGCAATaGGCATGGCATACATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFISYSGQ*AWHTCW Trigger: CCAACATGTATGCCATGCTCATTGCCCGCTATAAGA...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAATTTCCTCCAGATTTTaGGGTTGGTCTGCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSISSRF*GWSANS Trigger: GGAATTGGCAGACCAACCGCAAAATCTGGAGGAAAT...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCACAAGCAGCATCCACGTaGATCCAGATCTTATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSQAAST*IQILYF Trigger: AAAGTATAAGATCTGGATGCACGTGGATGCTGCTTG...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCCAGATTTTGCGGTTaGTCTGCCAATTCCCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSSRFCG*SANSQL Trigger: TAATTGGGAATTGGCAGACCAACCGCAAAATCTGGA...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR TCA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCTTCTTGAGAGAAAAGTaGCTATGCTCTGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNVQYSLPPLLLHYYSFIFLREK*LCSDVN Trigger: GTTCACATCAGAGCATAGTCACTTTTCTCTCAAGAA...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR GCA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAAGATCTTATACTTTTTaGAGATGTCAGCTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPTFNIVSLHYYSIITLSRSYTF*RCQLQP Trigger: TGGCTGTAGCTGACATCTGCAAAAAGTATAAGATCT...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CAA 72 bp | TACATTGTGCAAGTTTTTACAGCAACACATGTTGTTTaGCAACACCACACAATTCAATATAAAGTGCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: YIVQVFTATHVV*QHHTIQYKVHN Trigger: GTTGTGCACTTTATATTGAATTGTGTGGTGTTGCAAAACAACATGTGTTGCTGTAAAAACTTGCACAATGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CAA 72 bp | GGTAATACATTGTGCAAGTTTTTACAGCAACACATGTaGTTTTGCAACACCACACAATTCAATATAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNTLCKFLQQHM*FCNTTQFNIKC Trigger: GCACTTTATATTGAATTGTGTGGTGTTGCAAAACAACATGTGTTGCTGTAAAAACTTGCACAATGTATTACC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| 3UTR CAA 72 bp | TGCTGGGGAAATGTTGACATTATTCAGAAACACCATTaGGCAACAAGATCTTTGCATACACAACTAATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CWGNVDIIQKHH*ATRSLHTQLIN Trigger: ATTAATTAGTTGTGTATGCAAAGATCTTGTTGCCAAATGGTGTTTCTGAATAATGTCAACATTTCCCCAGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 90 bp | GGCAGTTGCAGGGTTTTTGGTCGCAGGTGCAGGCGACCTTCCCGGTaGCGGCCCGCGAGGTCACGCTCCCGCCGCCCTCCGCTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSCRVFGRRCRRPSR*RPARSRSRRPPLAS Trigger: GGAAGCCAGCGGAGGGCGGCGGGAGCGTGACCTCGCGGGCCGCCACCGGGAAGGTCGCCTGCACCTGCGACCAAAAACCCTGCAACTGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 90 bp | CTTCCCGGTGGCGGCCCGCGAGGTCACGCTCCCGCCGCCCTCCGCTaGCTTCCCGGAGTCTCCATAGAGCAGAGCGCACAGCTTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGGGPRGHAPAALR*LPGVSIEQSAQLVS Trigger: GGAAACAAGCTGTGCGCTCTGCTCTATGGAGACTCCGGGAAGCCAGCGGAGGGCGGCGGGAGCGTGACCTCGCGGGCCGCCACCGGGAAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 90 bp | GCGCACAGCTTGTTTCCGATGCCGCCCGTGAACTTTTGGGCCACCTaGCACCACGCTCTCGCTGTGCCCGGGTTCTCAGGATCCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHSLFPMPPVNFWAT*HHALAVPGFSGSAE Trigger: CTCTGCGGATCCTGAGAACCCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 90 bp | AGTCTCCATAGAGCAGAGCGCACAGCTTGTTTCCGATGCCGCCCGTaGACTTTTGGGCCACCTGGCACCACGCTCTCGCTGTGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLHRAERTACFRCRP*TFGPPGTTLSLCPG Trigger: ACCCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGCTCTGCTCTATGGAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAGCCGCCCGTGAACTTTaGGGCCACCTGGCACCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGRESSRRDFKVWDGEGAAREL*GHLAPR Trigger: GCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGC...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 90 bp | TCTGTTCCAATCCCTAAGGCTGCAGCTCCCTTCTTGAGAGAAAAGTaGCTATGCTCTGATGTGAACGCGATGAGCCTGGGCACTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVPIPKAAAPFLREK*LCSDVNAMSLGTAA Trigger: GGCAGCAGTGCCCAGGCTCATCGCGTTCACATCAGAGCATAGTCACTTTTCTCTCAAGAAGGGAGCTGCAGCCTTAGGGATTGGAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 90 bp | CGCGATGAGCCTGGGCACTGCTGCCATCCCCTTCTCCTTGACTTCTaGAAACATCTTATAGCGGGCAATGAGCATGGCATACATGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDEPGHCCHPLLLDF*KHLIAGNEHGIHVG Trigger: TCCAACATGTATGCCATGCTCATTGCCCGCTATAAGATGTTTCCAGAAGTCAAGGAGAAGGGGATGGCAGCAGTGCCCAGGCTCATCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAAGCAGAGCGCACAGCTaGTTTCCGATGCCGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHIYSQQPGSRKESYACPSRAHS*FPMPPV Trigger: CACGGGCGGCATCGGAAACAAGCTGTGCGCTCTGCT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAAATTTCCTCCAGATTTaGCGGTTGGTCTGCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGRESSRRDFKVWDGEGNFLQI*RLVCQF Trigger: GAATTGGCAGACCAACCGCAAAATCTGGAGGAAATT...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCGAAGCATGCATCTGGTaGCAGCTCTGCATCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGMHVPPFLGYRMRRFACEACIW*QLCISP Trigger: GGGACTGATGCAGAGCTGCAACCAGATGCATGCTTC...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGAGTCATAGTGCTTATCTaGCTGAAAGAGGTAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGRESSRRDFKVWDGEGVIVLI*LKEVGS Trigger: GCTTCCTACCTCTTTCAGCAAGATAAGCACTATGAC...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGACTCATTCTCTCTTCATaGTCTTCCAGAGTGCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGGRESSRRDFKVWDGEGLILSS*SSRVRK Trigger: TTTGCGCACTCTGGAAGACAATGAAGAGAGAATGAG...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| CDS-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCCACTCAGCTTCCACTaGTGTTTCCGGGACATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGMHVPPFLGYRMRRFACPLSFH*CFRDIS Trigger: ACTGATGTCCCGGAAACACAAGTGGAAGCTGAGTGG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGGGCAGGGAGTCTAGCAGGAGAGACTTTAAAGTGTGGGATGGAGAAGGATTCCCAATTATACTCTaGAAGAAGCTCATTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGGRESSRRDFKVWDGEGFPIIL*KKLIGV Trigger: TACCCCAATGAGCTTCTTCAAGAGTATAATTGGGAA...TCCTTCTCCATCCCACACTTTAAAGTCTCTCCTGCTAGACTCCCTGCCCCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCCTCCAGATTTTGCGGTaGGTCTGCCAATTCCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LGMHVPPFLGYRMRRFACLQILR*VCQFPI Trigger: AATTGGGAATTGGCAGACCAACCGCAAAATCTGGAG...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATGCATGTACCTCCTTTTCTAGGATACAGGATGAGAAGATTTGCATGCACCAGAAGCAGACATTaGTGTGTTGAGGCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGMHVPPFLGYRMRRFACTRSRH*CVEASH Trigger: ATGGGAAGCCTCAACACACAAATGTCTGCTTCTGGT...GCATGCAAATCTTCTCATCCTGTATCCTAGAAAAGGAGGTACATGCATGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| CDS-3UTR CAA 90 bp | CTGCATATTTACTCTCAGCAGCCAGGTTCTAGAAAGGAAAGTTATGCCTGTCCAAAGGAAGTCAATGTCTaGGTGAGTTGCTGCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHIYSQQPGSRKESYACPKEVNV*VSCCRV Trigger: AACCCTGCAGCAACTCACCAAGACATTGACTTCCTT...TGGACAGGCATAACTTTCCTTTCTAGAACCTGGCTGCTGAGAGTAAATATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | ACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCATCAGCATGGCATACATGTaGGAGATGGCGCCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNVQYSLPPLLLHYYSFISMAYM*EMAPPG Trigger: TCCTGGTGGCGCCATCTCCAACATGTATGCCATGCT...GATGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS-3UTR CAA 90 bp | GGACCAACGTTCAATATAGTCTCCCTCCATTATTACTCCATTATTACTCTTTCAGCCATCCCCTTCTCCTaGACTTCTGGAAACATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GPTFNIVSLHYYSIITLSAIPFS*TSGNIL Trigger: TAAGATGTTTCCAGAAGTCAAGGAGAAGGGGATGGC...TGAAAGAGTAATAATGGAGTAATAATGGAGGGAGACTATATTGAACGTTGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 90 bp | AAATCGATCACTTTAGTTGATCTATCGAAACTTTTCACCACGTACTaGAGCAAAATGTTCATAACATCTTGTAGAAATGCCAGAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSITLVDLSKLFTTY*SKMFITSCRNARVG Trigger: GCCCACTCTGGCATTTCTACAAGATGTTATGAACATTTTGCTTCAGTACGTGGTGAAAAGTTTCGATAGATCAACTAAAGTGATCGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| CDS CCA 72 bp | GGCGGCCCGCGAGGTCACGCTCCCGCCGCCCTCCGCTaGCTTCCCGGAGTCTCCATAGAGCAGAGCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GGPRGHAPAALR*LPGVSIEQSAQ Trigger: CTGTGCGCTCTGCTCTATGGAGACTCCGGGAAGCCAGCGGAGGGCGGCGGGAGCGTGACCTCGCGGGCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 72 bp | AGGGTTTTTGGTCGCAGGTGCAGGCGACCTTCCCGGTaGCGGCCCGCGAGGTCACGCTCCCGCCGCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RVFGRRCRRPSR*RPARSRSRRPP Trigger: CGGAGGGCGGCGGGAGCGTGACCTCGCGGGCCGCCACCGGGAAGGTCGCCTGCACCTGCGACCAAAAACCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 72 bp | GCGCACAGCTTGTTTCCGATGCCGCCCGTGAACTTTTaGGCCACCTGGCACCACGCTCTCGCTGTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AHSLFPMPPVNF*ATWHHALAVPG Trigger: CCCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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| CDS CAA 72 bp | AGCGCACAGCTTGTTTCCGATGCCGCCCGTGAACTTTaGGGCCACCTGGCACCACGCTCTCGCTGTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SAQLVSDAAREL*GHLAPRSRCAR Trigger: CCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 90 bp | ATAGAGCAGAGCGCACAGCTTGTTTCCGATGCCGCCCGTGAACTTTaGGGCCACCTGGCACCACGCTCTCGCTGTGCCCGGGTTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IEQSAQLVSDAAREL*GHLAPRSRCARVLR Trigger: CCTGAGAACCCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGCTCTGCTCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 72 bp | AGAGCAGAGCGCACAGCTTGTTTCCGATGCCGCCCGTaGACTTTTGGGCCACCTGGCACCACGCTCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAERTACFRCRP*TFGPPGTTLSL Trigger: CAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAAGCTGTGCGCTCTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CCA 72 bp | TTGTTTCCGATGCCGCCCGTGAACTTTTGGGCCACCTaGCACCACGCTCTCGCTGTGCCCGGGTTCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFPMPPVNFWAT*HHALAVPGFSG Trigger: TCCTGAGAACCCGGGCACAGCGAGAGCGTGGTGCCAGGTGGCCCAAAAGTTCACGGGCGGCATCGGAAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 90 bp | TTCCATGTCACAGAGTTGGCCCTCTCTACTCCACTCAGCTTCCACTaGTGTTTCCGGGACATCAGTAACCCTCCACCCCAAGCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FHVTELALSTPLSFH*CFRDISNPPPQAAS Trigger: GGATGCTGCTTGGGGTGGAGGGTTACTGATGTCCCGGAAACACAAGTGGAAGCTGAGTGGAGTAGAGAGGGCCAACTCTGTGACATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 72 bp | ACAGAGTTGGCCCTCTCTACTCCACTCAGCTTCCACTaGTGTTTCCGGGACATCAGTAACCCTCCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TELALSTPLSFH*CFRDISNPPPQ Trigger: TTGGGGTGGAGGGTTACTGATGTCCCGGAAACACAAGTGGAAGCTGAGTGGAGTAGAGAGGGCCAACTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 72 bp | TGCAGCTCCCTTCTTGAGAGAAAAGTGACTATGCTCTaGTGTGAACGCGATGAGCCTGGGCACTGCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSSLLERKVTML*CERDEPGHCCH Trigger: ATGGCAGCAGTGCCCAGGCTCATCGCGTTCACATCAGAGCATAGTCACTTTTCTCTCAAGAAGGGAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 72 bp | ATCCCTAAGGCTGCAGCTCCCTTCTTGAGAGAAAAGTaGCTATGCTCTGATGTGAACGCGATGAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IPKAAAPFLREK*LCSDVNAMSLG Trigger: GCCCAGGCTCATCGCGTTCACATCAGAGCATAGTCACTTTTCTCTCAAGAAGGGAGCTGCAGCCTTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 72 bp | GGCGCCACCTTTGAGAGGCGGCTCATTCTCTCTTCATaGTCTTCCAGAGTGCGCAAACTAGGAGGTACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GATFERRLILSS*SSRVRKLGGTN Trigger: GTTTGTACCTCCTAGTTTGCGCACTCTGGAAGACAATGAAGAGAGAATGAGCCGCCTCTCAAAGGTGGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 90 bp | TTAATCACTGGCGCCACCTTTGAGAGGCGGCTCATTCTCTCTTCATaGTCTTCCAGAGTGCGCAAACTAGGAGGTACAAACCAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LITGATFERRLILSS*SSRVRKLGGTNQKQ Trigger: CTGCTTCTGGTTTGTACCTCCTAGTTTGCGCACTCTGGAAGACAATGAAGAGAGAATGAGCCGCCTCTCAAAGGTGGCGCCAGTGATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 72 bp | CAAGCAGCATCCACGTGCATCCAGATCTTATACTTTTaGCAGATGTCAGCTACAGCCAAGAGAGGATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QAASTCIQILYF*QMSATAKRGSK Trigger: TTTTGATCCTCTCTTGGCTGTAGCTGACATCTGCAAAAAGTATAAGATCTGGATGCACGTGGATGCTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 72 bp | ATTTTGCGGTTGGTCTGCCAATTCCCAATTATACTCTaGAAGAAGCTCATTGGGGTAATGGAAATCGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILRLVCQFPIIL*KKLIGVMEIDH Trigger: GTGATCGATTTCCATTACCCCAATGAGCTTCTTCAAGAGTATAATTGGGAATTGGCAGACCAACCGCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS CAA 72 bp | AGTTGTTTGGCAATGCGTCAAAATTTCCTCCAGATTTaGCGGTTGGTCTGCCAATTCCCAATTATACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCLAMRQNFLQI*RLVCQFPIILL Trigger: CAAGAGTATAATTGGGAATTGGCAGACCAACCGCAAAATCTGGAGGAAATTTTGACGCATTGCCAAACAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS GCA 72 bp | ATGCGTCAAAATTTCCTCCAGATTTTGCGGTTGGTCTaGCAATTCCCAATTATACTCTTGAAGAAGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: MRQNFLQILRLV*QFPIILLKKLI Trigger: AATGAGCTTCTTCAAGAGTATAATTGGGAATTGGCAGACCAACCGCAAAATCTGGAGGAAATTTTGACGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 72 bp | AAGCTCATTGGGGTAATGGAAATCGATCACTTTAGTTaGTCTATCGAAACTTTTCACCACGTACTGAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: KLIGVMEIDHFS*SIETFHHVLKQ Trigger: TTGCTTCAGTACGTGGTGAAAAGTTTCGATAGATCAACTAAAGTGATCGATTTCCATTACCCCAATGAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
||
| CDS TCA 72 bp | ACTTTAGTTGATCTATCGAAACTTTTCACCACGTACTaGAGCAAAATGTTCATAACATCTTGTAGAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLVDLSKLFTTY*SKMFITSCRNA Trigger: GGCATTTCTACAAGATGTTATGAACATTTTGCTTCAGTACGTGGTGAAAAGTTTCGATAGATCAACTAAAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028123.4 |
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