Pregenerated sensors for GABRR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074991Ensembl transcript IDs: ENSMUST00000114341.4
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACAGTTGTGCATTAATGGCCCCCAAGAGAATGTGGAGAATATGTaGAGTGTGATAGAGGCCCATTCTCCTAGCCTCGATTGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: QQLCINGPQENVENM*SVIEAHSPSLDCQV Trigger: CACTTGGCAATCGAGGCTAGGAGAATGGGCCTCTATCACACTCCACATATTCTCCACATTCTCTTGGGGGCCATTAATGCACAACTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 90 bp | GAAGATATACTGCCTGTGTTCCTAGATATTAGCAAAAGTTACATTTaGTTGGCCAACAGTTGTGCATTAATGGCCCCCAAGAGAATGTGG | + |
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Preference number: 1 (lower is better) Translates to: EDILPVFLDISKSYI*LANSCALMAPKRMW Trigger: CCACATTCTCTTGGGGGCCATTAATGCACAACTGTTGGCCAATCAAATGTAACTTTTGCTAATATCTAGGAACACAGGCAGTATATCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 90 bp | ATTTTCTTTGAAGTAAGAACCAACCCAGAAATCTTGTGTCTCCCTTaGAGCAAGGAAGCTAACAGGAACAGTTCTCTTTCACAAATGGCA | + |
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Preference number: 1 (lower is better) Translates to: IFFEVRTNPEILCLP*SKEANRNSSLSQMA Trigger: TGCCATTTGTGAAAGAGAACTGTTCCTGTTAGCTTCCTTGCTCCAAGGGAGACACAAGATTTCTGGGTTGGTTCTTACTTCAAAGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 90 bp | TGTCATGATTCTTTGCCATCTTGGGCACTTATCTCTCTGGAACTGTaGGACCAAATAACTCTTTCCTCTAAAAGTTGCTTTGGTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: CHDSLPSWALISLEL*DQITLSSKSCFGHF Trigger: AAAATGACCAAAGCAACTTTTAGAGGAAAGAGTTATTTGGTCCCACAGTTCCAGAGAGATAAGTGCCCAAGATGGCAAAGAATCATGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 90 bp | AGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTTGACCTaGTTTGCTTCTTGCAATGAAAATTGCTGTGGCATACATACTTTG | + |
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Preference number: 1 (lower is better) Translates to: RGFPTEQHLCNAHLT*FASCNENCCGIHTL Trigger: CAAAGTATGTATGCCACAGCAATTTTCATTGCAAGAAGCAAATCAGGTCAAGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 90 bp | AGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTTaGCCTGATTTGCTTCTTGCAATGAAAATTGCTGTGGCATACATA | + |
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Preference number: 1 (lower is better) Translates to: RTEGFLLNNIYVMPT*PDLLLAMKIAVAYI Trigger: TATGTATGCCACAGCAATTTTCATTGCAAGAAGCAAATCAGGTCAAGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 90 bp | ATAAAATATCCCACACGGAATTGTGTACACTGCCAATCTGAAAAATaGATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAAT | + |
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Preference number: 1 (lower is better) Translates to: IKYPTRNCVHCQSEK*MQNRGFPTEQHLCN Trigger: ATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTACACAATTCCGTGTGGGATATTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAAGACCAACACTGTGGTaGTCTAAGCGAGAGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: VKWISPGEALGIASAVIQRPTLW*SKRECH Trigger: GTGACACTCTCGCTTAGACCACCACAGTGTTGGTCT...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR GCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTTCTTCTTGCCACCATaGCTGCTGCTTGCTGTCATG | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQFFLPP*LLLAVM Trigger: CATGACAGCAAGCAGCAGGCATGGTGGCAAGAAGAA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACTGCTGCTTGCTGTCATaGTTCTTTGCCATCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: YTANLKNECRTEGFLLNNCCLLS*FFAILG Trigger: GCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCA...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAATTGGATGGAGGGAATaGTGCTGGTGTTTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: VKWISPGEALGIASAVIQIGWRE*CWCFCF Trigger: GAAACAGAAACACCAGCACCATTCCCTCCATCCAAT...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGAGTTGGTGGCACTGCTaGGGGAAATTTAGGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQSWWHC*GKFRKY Trigger: ATACTTCCTAAATTTCCCTCAGCAGTGCCACCAACT...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACTTTCTTTACTTGGTGTaGTGCCCAAAGACCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: YTANLKNECRTEGFLLNNFLYLV*CPKTPQ Trigger: CTGAGGGGTCTTTGGGCATCACACCAAGTAAAGAAA...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAATATGTAATGCCCACTTaGCCTGATTTGCTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: VKWISPGEALGIASAVIQYVMPT*PDLLLA Trigger: TGCAAGAAGCAAATCAGGTCAAGTGGGCATTACATA...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAGAAATCAGTTATCCTTaGATAACTGCCATAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VKWISPGEALGIASAVIQEISYP*ITAIVQ Trigger: CTGGACTATGGCAGTTATTCAAGGATAACTGATTTC...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGATTCAGGGGGAGAGGTaGGAATTTCTTTTTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQIQGER*EFLFLL Trigger: AAGGAGAAAAAGAAATTCCCACCTCTCCCCCTGAAT...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTTCAGTTTCTTTACTTaGTGTGATGCCCAAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQFSFFT*CDAQRP Trigger: GGGTCTTTGGGCATCACACCAAGTAAAGAAACTGAA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CAA 90 bp | AACCATGCTTTCATTTTCTTTGAAGTAAGAACCAACCCAGAAATCTaGTGTCTCCCTTGGAGCAAGGAAGCTAACAGGAACAGTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NHAFIFFEVRTNPEI*CLPWSKEANRNSSL Trigger: AAGAGAACTGTTCCTGTTAGCTTCCTTGCTCCAAGGGAGACACAAGATTTCTGGGTTGGTTCTTACTTCAAAGAAAATGAAAGCATGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTGTACACTGCCAATCTaGAAAATGAATGCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQCTLPI*KMNAEQ Trigger: CTGTTCTGCATTCATTTTTCAGATTGGCAGTGTACA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACGATTCTTTGCCATCTTaGGCACTTATCTCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: YTANLKNECRTEGFLLNNDSLPS*ALISLE Trigger: TTCCAGAGAGATAAGTGCCCAAGATGGCAAAGAATC...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTTGTAACGTAATCACTTaGAGATGGAAGCTCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NECRTEGFLLNNIYVMPTCNVIT*RWKLSL Trigger: AAGAGAGAGCTTCCATCTTCAAGTGATTACGTTACA...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR GCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTTATCCTTGAATAACTaGCATAGTCCAGCTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: IRYCECCNSRDVKNSHLQLSLNN*HSPALF Trigger: GAATAAAGCTGGACTATGGCAGTTATTCAAGGATAA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR TCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTATTTGCTTCTTGCAATaGAAATTGCTGTGGCATACA | + |
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Preference number: 2 (lower is better) Translates to: NECRTEGFLLNNIYVMPTICFLQ*KLLWHT Trigger: TGTATGCCACAGCAATTTTCATTGCAAGAAGCAAAT...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR GCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACGTGGCATACATACTTTaGATTCAGTTTCTTTACTTG | + |
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Preference number: 2 (lower is better) Translates to: YTANLKNECRTEGFLLNNVAYIL*IQFLYL Trigger: CAAGTAAAGAAACTGAATGCAAAGTATGTATGCCAC...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR GCA 72 bp | TTGCCACCATGCCTGCTGCTTGCTGTCATGATTCTTTaGCATCTTGGGCACTTATCTCTCTGGAACTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LPPCLLLAVMIL*HLGHLSLWNCG Trigger: CCCACAGTTCCAGAGAGATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 72 bp | TGCATTAATGGCCCCCAAGAGAATGTGGAGAATATGTaGAGTGTGATAGAGGCCCATTCTCCTAGCCTCGAT | + |
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Preference number: 3 (lower is better) Translates to: CINGPQENVENM*SVIEAHSPSLD Trigger: ATCGAGGCTAGGAGAATGGGCCTCTATCACACTCCACATATTCTCCACATTCTCTTGGGGGCCATTAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 72 bp | ATGCCTGCTGCTTGCTGTCATGATTCTTTGCCATCTTaGGCACTTATCTCTCTGGAACTGTGGGACCAAATA | + |
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Preference number: 3 (lower is better) Translates to: MPAACCHDSLPS*ALISLELWDQI Trigger: TATTTGGTCCCACAGTTCCAGAGAGATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR GCA 72 bp | AAGTATGGAATTCTTCTTGCCACCATGCCTGCTGCTTaGTGTCATGATTCTTTGCCATCTTGGGCACTTATC | + |
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Preference number: 3 (lower is better) Translates to: KYGILLATMPAA*CHDSLPSWALI Trigger: GATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGTGGCAAGAAGAATTCCATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 72 bp | CATCGTTTACATCTTCCTGAGGCCAAGAGACATGACTaGCTCTATCCCAGTTTAACTGTCCAACTCATATCC | + |
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Preference number: 3 (lower is better) Translates to: HRLHLPEAKRHD*LYPSLTVQLIS Trigger: GGATATGAGTTGGACAGTTAAACTGGGATAGAGCCAGTCATGTCTCTTGGCCTCAGGAAGATGTAAACGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 72 bp | GTATTTACGCATTTAGCCCCAAGTTGGTGGCACTGCTaGGGGAAATTTAGGAAGTATGGAATTCTTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: VFTHLAPSWWHC*GKFRKYGILLA Trigger: GGCAAGAAGAATTCCATACTTCCTAAATTTCCCTCAGCAGTGCCACCAACTTGGGGCTAAATGCGTAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 72 bp | CTGCCTGTGTTCCTAGATATTAGCAAAAGTTACATTTaGTTGGCCAACAGTTGTGCATTAATGGCCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LPVFLDISKSYI*LANSCALMAPK Trigger: CTTGGGGGCCATTAATGCACAACTGTTGGCCAATCAAATGTAACTTTTGCTAATATCTAGGAACACAGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR GCA 72 bp | GGAAATTTAGGAAGTATGGAATTCTTCTTGCCACCATaGCTGCTGCTTGCTGTCATGATTCTTTGCCATCTT | + |
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Preference number: 3 (lower is better) Translates to: GNLGSMEFFLPP*LLLAVMILCHL Trigger: AAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGTGGCAAGAAGAATTCCATACTTCCTAAATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CAA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGACCAGAACCACTAAATaGGTTTGTCAACTAGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: IRYCECCNSRDVKNSHLQTRTTK*VCQLVC Trigger: GCAAACTAGTTGACAAACCAATTTAGTGGTTCTGGT...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 72 bp | GTTTTCAGCAATCAAAGTATAGAAGAGGACATTTCCTaGCTTTCTGCCAAGGGATTTGCTCTAAATTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: VFSNQSIEEDIS*LSAKGFALNCA Trigger: GGCACAATTTAGAGCAAATCCCTTGGCAGAAAGTCAGGAAATGTCCTCTTCTATACTTTGATTGCTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR-3UTR CAA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACCTCTTCAGTCTGGGGTaGGTAAAATACTTATTTAAC | + |
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Preference number: 3 (lower is better) Translates to: YTANLKNECRTEGFLLNNLFSLG*VKYLFN Trigger: GTTAAATAAGTATTTTACCAACCCCAGACTGAAGAG...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR TCA 72 bp | GGTTTCCTACTGAACAACATTTATGTAATGCCCACTTaGCCTGATTTGCTTCTTGCAATGAAAATTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GFLLNNIYVMPT*PDLLLAMKIAV Trigger: CACAGCAATTTTCATTGCAAGAAGCAAATCAGGTCAAGTGGGCATTACATAAATGTTGTTCAGTAGGAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 72 bp | GTCCTGCAGCTCATTCTGAATGGTCTGATAATTCCCTaGTGCAGTAAACGAATTTTATTTCTAAGTATTAGA | + |
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Preference number: 3 (lower is better) Translates to: VLQLILNGLIIP*CSKRILFLSIR Trigger: TCTAATACTTAGAAATAAAATTCGTTTACTGCACCAGGGAATTATCAGACCATTCAGAATGAGCTGCAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR GCA 72 bp | TGGCAGACACTAAGAAATCAGTTATCCTTGAATAACTaGCATAGTCCAGCTTTATTCCCTACTTTAAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: WQTLRNQLSLNN*HSPALFPTLKR Trigger: TCTTTTTAAAGTAGGGAATAAAGCTGGACTATGGCAGTTATTCAAGGATAACTGATTTCTTAGTGTCTGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR GCA 72 bp | CTGCAGCTCATTCTGAATGGTCTGATAATTCCCTGGTaGAGTAAACGAATTTTATTTCTAAGTATTAGACAT | + |
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Preference number: 3 (lower is better) Translates to: LQLILNGLIIPW*SKRILFLSIRH Trigger: ATGTCTAATACTTAGAAATAAAATTCGTTTACTGCACCAGGGAATTATCAGACCATTCAGAATGAGCTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CCA 72 bp | TGCACATTTGTATATTTAGGCGGTTTACAAGCTGGCTaGCTTTTTAAAAATATCTTACAAAGAGGCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: CTFVYLGGLQAG*LFKNILQRGLC Trigger: ACACAAGCCTCTTTGTAAGATATTTTTAAAAAGCCAGCCAGCTTGTAAACCGCCTAAATATACAAATGTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CAA 72 bp | CTTGCCACCATGCCTGCTGCTTGCTGTCATGATTCTTaGCCATCTTGGGCACTTATCTCTCTGGAACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LATMPAACCHDS*PSWALISLELW Trigger: CCACAGTTCCAGAGAGATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGTGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| 3UTR CAA 72 bp | GATGTGAAAAACAGCCATCTCCAGGGAGCCAGAGAATaGGATGGAGGGAATGGTGCTGGTGTTTCTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DVKNSHLQGARE*DGGNGAGVSVS Trigger: AGAAACAGAAACACCAGCACCATTCCCTCCATCCAATTCTCTGGCTCCCTGGAGATGGCTGTTTTTCACATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR GCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAAGTACCACCCTGTGCTaGTGTAGAAAGCCAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQSTTLC*CRKPVH Trigger: GTGGACTGGCTTTCTACAGCAGCACAGGGTGGTACT...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR CCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAACAAACCCAGGCCTCGTaGAGAAATCGTGGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQQTQAS*RNRGPQ Trigger: TTGAGGACCACGATTTCTCCACGAGGCCTGGGTTTG...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR TCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTACACATCCACCGCCTTaGCATAGGACACCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTTHPPP*HRTPGA Trigger: TGCCCCAGGTGTCCTATGTCAAGGCGGTGGATGTGT...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR GCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAAGCCAGTCCACTGGATaGGCTGAACTCCTCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQSQSTG*AELLNE Trigger: TTCATTGAGGAGTTCAGCGCATCCAGTGGACTGGCT...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR GCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTCCCCAGGGAAACTCTTaGAGGAACAGCTCTCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTPQGNS*RNSSPV Trigger: GACCGGAGAGCTGTTCCTGCAAGAGTTTCCCTGGGG...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS-3UTR TCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTCTTTCCCCTCCTGTTaGGTTGTTTCCACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRYCECCNSRDVKNSHLQSFPSC*VVSTPP Trigger: TGGAGGAGTGGAAACAACTCAACAGGAGGGGAAAGA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTCGATGCTTTCAACCTaGACATCTATACCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRYCECCNSRDVKNSHLQSMLST*TSIPTG Trigger: GCCCGTGGGTATAGATGTCCAGGTTGAAAGCATCGA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAACACCATCAACATGGCTaGAAAATAGGTCTGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQHHQHG*KIGLQD Trigger: GTCCTGCAGACCTATTTTCCAGCCATGTTGATGGTG...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | CTAAGAAATCAGTTATCCTTGAATAACTGCCATAGTCCAGCTTTATTCCCTACTGCTGATGGGGTTTCTTaGTGGCAGAGGCATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNQLSLNNCHSPALFPTADGVS*WQRHPA Trigger: TGCTGGATGCCTCTGCCATCAAGAAACCCCATCAGC...AGTAGGGAATAAAGCTGGACTATGGCAGTTATTCAAGGATAACTGATTTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAATCCTCAATGAAGAACTaGGAAAGGGAAATGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQSSMKN*EREMRS Trigger: AGAGCGCATTTCCCTTTCTCAGTTCTTCATTGAGGA...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTCGAAGGCCATGGCTTaGACAGCATCAATATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IRYCECCNSRDVKNSHLQSKAMA*TASIWY Trigger: GTACCATATTGATGCTGTTCAAGCCATGGCCTTCGA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAACTGAGAAAGGGAAATaGGCTCTTCCGTGTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQTEKGK*ALPCLR Trigger: CCTTAAACACGGAAGAGCGCATTTCCCTTTCTCAGT...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAGCATCACCATCAACATaGCTGGAAAATAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQASPST*LENRSA Trigger: TGCAGACCTATTTTCCAGCCATGTTGATGGTGATGC...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| 3UTR CAA 72 bp | ACTGCTGAGGGAAATTTAGGAAGTATGGAATTCTTCTaGCCACCATGCCTGCTGCTTGCTGTCATGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAEGNLGSMEFF*PPCLLLAVMIL Trigger: AAGAATCATGACAGCAAGCAGCAGGCATGGTGGCAAGAAGAATTCCATACTTCCTAAATTTCCCTCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACACTCCTCCACTGTGGTaGGGTAATTCACAGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTANLKNECRTEGFLLNNTPPLW*GNSQLH Trigger: ATGCAACTGTGAATTACCTCACCACAGTGGAGGAGT...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAAGATTTCCTTTTTATCTaGGATGAATCTGCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQDFLFI*DESAQG Trigger: CCCCTGTGCAGATTCATCTCAGATAAAAAGGAAATC...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGATAAGCCCAGGGGAAGCATTAGGTATTGCGAGTGCTGTAATTCAACTGAAATGCTGTCGATaGTTTCAACCTGGACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VKWISPGEALGIASAVIQLKCCR*FQPGHL Trigger: TAGATGTCCAGGTTGAAAGCATCGACAGCATTTCAG...TTGAATTACAGCACTCGCAATACCTAATGCTTCCCCTGGGCTTATCCATTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTTATAGTACCACCCTGTaGTGCTGTAGAAAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTYSTTL*CCRKPV Trigger: GACTGGCTTTCTACAGCAGCACAGGGTGGTACTATA...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGTCCACGGTTGTGTCGTaGATGAAGGATCTTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRYCECCNSRDVKNSHLQSTVVS*MKDLLE Trigger: TTCTAAAAGATCCTTCATCCACGACACAACCGTGGA...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACCAGTTGCATACTCAATaGCGGACAGAAACACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTANLKNECRTEGFLLNNQLHTQ*RTETQR Trigger: TCTTTGTGTTTCTGTCCGTCATTGAGTATGCAACTG...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR TCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTGGTTGTTTTCCAGGATaGTTCTACCAACGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTGCFPG*FYQRFL Trigger: GAGGAAACGTTGGTAGAATCATCCTGGAAAACAACC...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACTGTTTAAGGACTTGTTaGCGTGTTTCCAGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTANLKNECRTEGFLLNNCLRTC*RVSSRA Trigger: TGCTCTACTGGAAACACGGCAACAAGTCCTTAAACA...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACAACCATCGAAGGCCATaGCTTGAACAGCATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: YTANLKNECRTEGFLLNNNHRRP*LEQHQY Trigger: ATATTGATGCTGTTCAAGCCATGGCCTTCGATGGTT...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTTCGTGGTCCTCAATGTaGAACAGTTGTTCACGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTSWSSM*NSCSRL Trigger: TAAACGTGAACAACTGTTGCACATTGAGGACCACGA...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTGAGGTAATTCACAGTTaGATACTCAATGACGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NECRTEGFLLNNIYVMPTEVIHS*ILNDGQ Trigger: CTGTCCGTCATTGAGTATGCAACTGTGAATTACCTC...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR GCA 90 bp | CTAAGAAATCAGTTATCCTTGAATAACTGCCATAGTCCAGCTTTATTCCCTACTACAAAGAAGAAAACGTaGCTCCGTAGCACAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRNQLSLNNCHSPALFPTTKKKT*LRSTKL Trigger: CAACTTTGTGCTACGGAGGCACGTTTTCTTCTTTGT...AGTAGGGAATAAAGCTGGACTATGGCAGTTATTCAAGGATAACTGATTTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CCA 90 bp | ATTAGGTATTGCGAGTGCTGTAATTCAAGGGATGTGAAAAACAGCCATCTCCAGAAGGATCTTTTAGAATaGACAAAGAAGATATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRYCECCNSRDVKNSHLQKDLLE*TKKISG Trigger: GCCTGATATCTTCTTTGTCCATTCTAAAAGATCCTT...CTGGAGATGGCTGTTTTTCACATCCCTTGAATTACAGCACTCGCAATACCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| 3UTR CAA 72 bp | GCTTCTTGCAATGAAAATTGCTGTGGCATACATACTTaGCATTCAGTTTCTTTACTTGGTGTGATGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASCNENCCGIHT*HSVSLLGVMPK Trigger: TTTGGGCATCACACCAAGTAAAGAAACTGAATGCAAAGTATGTATGCCACAGCAATTTTCATTGCAAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| 3UTR CAA 72 bp | TTTGTCATTTGGCAGACACTAAGAAATCAGTTATCCTaGAATAACTGCCATAGTCCAGCTTTATTCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: FVIWQTLRNQLS*NNCHSPALFPT Trigger: AGTAGGGAATAAAGCTGGACTATGGCAGTTATTCAAGGATAACTGATTTCTTAGTGTCTGCCAAATGACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | GCTGTCGATGCTTTCAACCTGGACATCTATACCCACGGGCACTGGTaGGCCTCCAAACCCAGGCCTCGTGGAGAAATCGTGGTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AVDAFNLDIYTHGHW*ASKPRPRGEIVVLN Trigger: ATTGAGGACCACGATTTCTCCACGAGGCCTGGGTTTGGAGGCTCACCAGTGCCCGTGGGTATAGATGTCCAGGTTGAAAGCATCGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 90 bp | ACGGGCACTGGTGAGCCTCCAAACCCAGGCCTCGTGGAGAAATCGTaGTCCTCAATGTGCAACAGTTGTTCACGTTTAGGGTGCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TGTGEPPNPGLVEKS*SSMCNSCSRLGCQT Trigger: AGTCTGGCACCCTAAACGTGAACAACTGTTGCACATTGAGGACCACGATTTCTCCACGAGGCCTGGGTTTGGAGGCTCACCAGTGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | CTAGTTTCCCGGATGCGGGTTTGTTTCGGTGAAGAGAGACATTGCTaGTGGGGTTTCTTGATGGCAGAGGCATCCAGCATCAGTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LVSRMRVCFGEERHC*WGFLMAEASSISVI Trigger: GATCACACTGATGCTGGATGCCTCTGCCATCAAGAAACCCCATCAGCAATGTCTCTCTTCACCGAAACAAACCCGCATCCGGGAAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | GTCGTCTTTCCTCATCCTAGTTTCCCGGATGCGGGTTTGTTTCGGTaGAGAGAGACATTGCTGATGGGGTTTCTTGATGGCAGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VVFPHPSFPDAGLFR*RETLLMGFLDGRGI Trigger: GATGCCTCTGCCATCAAGAAACCCCATCAGCAATGTCTCTCTTCACCGAAACAAACCCGCATCCGGGAAACTAGGATGAGGAAAGACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 90 bp | GGTCCACATCAGTCTCGCTGTCATGGTAGCAACCATCGAAGGCCATaGCTTGAACAGCATCAATATGGTACATTCCAGATATCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPHQSRCHGSNHRRP*LEQHQYGTFQISFP Trigger: GGGGAAAGATATCTGGAATGTACCATATTGATGCTGTTCAAGCCATGGCCTTCGATGGTTGCTACCATGACAGCGAGACTGATGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS GCA 90 bp | GTTGAGTTGTTTCCACTCCTCCACTGTGGTGAGGTAATTCACAGTTaGATACTCAATGACGGACAGAAACACAAAGAGGGAGCTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VELFPLLHCGEVIHS*ILNDGQKHKEGADP Trigger: TGGGTCAGCTCCCTCTTTGTGTTTCTGTCCGTCATTGAGTATGCAACTGTGAATTACCTCACCACAGTGGAGGAGTGGAAACAACTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | ATAGTGCCTGAGGTAAAACGTCATGGTAAAGTCCATGTTGACCTCTaGAATGCTGTCGATGCTTTCAACCTGGACATCTATACCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVPEVKRHGKVHVDL*NAVDAFNLDIYTHG Trigger: CCCGTGGGTATAGATGTCCAGGTTGAAAGCATCGACAGCATTTCAGAGGTCAACATGGACTTTACCATGACGTTTTACCTCAGGCACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | GATTCTACCAACGTTTCCTCCCAGGGATTTCCTTTTTATCTGAGATaGATCTGCACAGGGGCTTCCTGTGAACTTTGTACTCATGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSTNVSSQGFPFYLR*ICTGASCELCTHGV Trigger: GACTCCATGAGTACAAAGTTCACAGGAAGCCCCTGTGCAGATTCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTTGGTAGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 90 bp | CCATCGGGATGTACTCGAAGCATGATATTCTCCACGGTTGTGTCGTaGATGAAGGATCTTTTAGAATGGACAAAGAAGATATCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSGCTRSMIFSTVVS*MKDLLEWTKKISGT Trigger: GGTGCCTGATATCTTCTTTGTCCATTCTAAAAGATCCTTCATCCACGACACAACCGTGGAGAATATCATGCTTCGAGTACATCCCGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 90 bp | AGGATGATTCTACCAACGTTTCCTCCCAGGGATTTCCTTTTTATCTaGGATGAATCTGCACAGGGGCTTCCTGTGAACTTTGTACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RMILPTFPPRDFLFI*DESAQGLPVNFVLM Trigger: CATGAGTACAAAGTTCACAGGAAGCCCCTGTGCAGATTCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTTGGTAGAATCATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS GCA 90 bp | AGAACTGAGAAAGGGAAATGCGCTCTTCCGTGTTTAAGGACTTGTTaGCGTGTTTCCAGTAGAGCATTAGGTCCTCTTCATTATAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTEKGKCALPCLRTC*RVSSRALGPLHYRH Trigger: ATGCCTATAATGAAGAGGACCTAATGCTCTACTGGAAACACGGCAACAAGTCCTTAAACACGGAAGAGCGCATTTCCCTTTCTCAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CAA 90 bp | TACACTGCCAATCTGAAAAATGAATGCAGAACAGAGGGTTTCCTACTGAACAACTCGAAGGTCATGCTTTaGTTTGTCGTGCTAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTANLKNECRTEGFLLNNSKVML*FVVLGK Trigger: CTTTCCTAGCACGACAAACAAAAGCATGACCTTCGA...GTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATTTTTCAGATTGGCAGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CAA 90 bp | CTAAGAAATCAGTTATCCTTGAATAACTGCCATAGTCCAGCTTTATTCCCTACTATCTTTCCCCTCCTGTaGAGTTGTTTCCACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNQLSLNNCHSPALFPTIFPLL*SCFHSS Trigger: GGAGGAGTGGAAACAACTCAACAGGAGGGGAAAGAT...AGTAGGGAATAAAGCTGGACTATGGCAGTTATTCAAGGATAACTGATTTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS-3UTR CAA 90 bp | AATGAATGCAGAACAGAGGGTTTCCTACTGAACAACATTTATGTAATGCCCACTATGGTAAAGTCCATGTaGACCTCTGAAATGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NECRTEGFLLNNIYVMPTMVKSM*TSEMLS Trigger: CGACAGCATTTCAGAGGTCAACATGGACTTTACCAT...AGTGGGCATTACATAAATGTTGTTCAGTAGGAAACCCTCTGTTCTGCATTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 72 bp | GCTTTCAACCTGGACATCTATACCCACGGGCACTGGTaGGCCTCCAAACCCAGGCCTCGTGGAGAAATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: AFNLDIYTHGHW*ASKPRPRGEIV Trigger: CACGATTTCTCCACGAGGCCTGGGTTTGGAGGCTCACCAGTGCCCGTGGGTATAGATGTCCAGGTTGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 72 bp | GGTGAGCCTCCAAACCCAGGCCTCGTGGAGAAATCGTaGTCCTCAATGTGCAACAGTTGTTCACGTTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEPPNPGLVEKS*SSMCNSCSRLG Trigger: CCCTAAACGTGAACAACTGTTGCACATTGAGGACCACGATTTCTCCACGAGGCCTGGGTTTGGAGGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 72 bp | ATGTTGACCTCTGAAATGCTGTCGATGCTTTCAACCTaGACATCTATACCCACGGGCACTGGTGAGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MLTSEMLSMLST*TSIPTGTGEPP Trigger: TGGAGGCTCACCAGTGCCCGTGGGTATAGATGTCCAGGTTGAAAGCATCGACAGCATTTCAGAGGTCAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CAA 90 bp | CACATCAGTCTCGCTGTCATGGTAGCAACCATCGAAGGCCATGGCTaGAACAGCATCAATATGGTACATTCCAGATATCTTTCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HISLAVMVATIEGHG*NSINMVHSRYLSPP Trigger: AGGAGGGGAAAGATATCTGGAATGTACCATATTGATGCTGTTCAAGCCATGGCCTTCGATGGTTGCTACCATGACAGCGAGACTGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 72 bp | CAGTCTCGCTGTCATGGTAGCAACCATCGAAGGCCATaGCTTGAACAGCATCAATATGGTACATTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QSRCHGSNHRRP*LEQHQYGTFQI Trigger: TATCTGGAATGTACCATATTGATGCTGTTCAAGCCATGGCCTTCGATGGTTGCTACCATGACAGCGAGACTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS TCA 72 bp | CTACCAACGTTTCCTCCCAGGGATTTCCTTTTTATCTaGGATGAATCTGCACAGGGGCTTCCTGTGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPTFPPRDFLFI*DESAQGLPVNF Trigger: AAAGTTCACAGGAAGCCCCTGTGCAGATTCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS GCA 72 bp | AAAGGGAAATGCGCTCTTCCGTGTTTAAGGACTTGTTaGCGTGTTTCCAGTAGAGCATTAGGTCCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KGKCALPCLRTC*RVSSRALGPLH Trigger: ATGAAGAGGACCTAATGCTCTACTGGAAACACGGCAACAAGTCCTTAAACACGGAAGAGCGCATTTCCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS GCA 72 bp | TTTCCACTCCTCCACTGTGGTGAGGTAATTCACAGTTaGATACTCAATGACGGACAGAAACACAAAGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPLLHCGEVIHS*ILNDGQKHKEG Trigger: TCCCTCTTTGTGTTTCTGTCCGTCATTGAGTATGCAACTGTGAATTACCTCACCACAGTGGAGGAGTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CCA 72 bp | GAAAGAGACCCAGGAAAGCATCACCATCAACATGGCTaGAAAATAGGTCTGCAGGACAAAGAAGAAAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERDPGKHHHQHG*KIGLQDKEENV Trigger: CACGTTTTCTTCTTTGTCCTGCAGACCTATTTTCCAGCCATGTTGATGGTGATGCTTTCCTGGGTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
||
| CDS CAA 72 bp | CTCGCTGTCATGGTAGCAACCATCGAAGGCCATGGCTaGAACAGCATCAATATGGTACATTCCAGATATCTT | + |
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Preference number: 6 (lower is better) Translates to: LAVMVATIEGHG*NSINMVHSRYL Trigger: AAGATATCTGGAATGTACCATATTGATGCTGTTCAAGCCATGGCCTTCGATGGTTGCTACCATGACAGCGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS TCA 72 bp | AACGTTTCCTCCCAGGGATTTCCTTTTTATCTGAGATaGATCTGCACAGGGGCTTCCTGTGAACTTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: NVSSQGFPFYLR*ICTGASCELCT Trigger: AGTACAAAGTTCACAGGAAGCCCCTGTGCAGATTCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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| CDS CCA 72 bp | TGTACTCGAAGCATGATATTCTCCACGGTTGTGTCGTaGATGAAGGATCTTTTAGAATGGACAAAGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: CTRSMIFSTVVS*MKDLLEWTKKI Trigger: TATCTTCTTTGTCCATTCTAAAAGATCCTTCATCCACGACACAACCGTGGAGAATATCATGCTTCGAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114341.4 |
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