Pregenerated sensors for GABRR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023267Ensembl transcript IDs: ENSMUST00000024035.9, ENSMUST00000108162.8, ENSMUST00000131920.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGAGGTCCCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTaGTGTGGAGTGTGGTCATTAGGTCCATGTATCCACCAGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: LEVPRLLQARSSCLA*CGVWSLGPCIHQWM Trigger: CATCCACTGGTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGGGACCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR CCA 90 bp | GGTCCCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTaGAGTGTGGTCATTAGGTCCATGTATCCACCAGTGGATGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: GPQAPPGQKQLLGLV*SVVIRSMYPPVDVH Trigger: ATGGACATCCACTGGTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCAACCAGTGGATGTCCATaGCCTTTCACAGACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRLLQARSSCLAWCGVWSTSGCP*PFTDTA Trigger: GGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGT...TGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACAGGCCAGAAGCAGCTaGTTGGCCTGGTGTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: KFTNSRRQLSVQRSQKCEQARSS*LAWCGV Trigger: CACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTG...TTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAGCAGCTGCTTGGCCTaGTGTGGAGTGTGGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: GDSCEQVHKQQKTAVCSESSCLA*CGVWSL Trigger: TAATGACCACACTCCACACCAGGCCAAGCAGCTGCT...CTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGAGATACCATGTATCCACCAGTaGATGTCCATGCCCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RQLSVQRSQKCELEYHEIPCIHQ*MSMPFH Trigger: GTGAAAGGGCATGGACATCCACTGGTGGATACATGG...TATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR CCA 72 bp | CCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTaGTGTGGAGTGTGGTCATTAGGTCCATGTATCCAC | + |
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Preference number: 3 (lower is better) Translates to: PRLLQARSSCLA*CGVWSLGPCIH Trigger: GTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR CCA 72 bp | CAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTaGTCATTAGGTCCATGTATCCACCAGTGGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QARSSCLAWCGV*SLGPCIHQWMS Trigger: GGACATCCACTGGTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| 3UTR CCA 72 bp | TGTGGAGTGTGGTCATTAGGTCCATGTATCCACCAGTaGATGTCCATGCCCTTTCACAGACACAGCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: CGVWSLGPCIHQ*MSMPFHRHSLR Trigger: TCTAAGGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGGACCTAATGACCACACTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | CCCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCTCATGCTCTTGTTGCTaGTGCTGGGGAAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PQAPPGQKQLLGLVWSVVSCSCC*CWGRPA Trigger: GGCTGGCCTTCCCCAGCAGCAGCAACAAGAGCATGA...GACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | CCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGCGTCATGATGCCCAGTaGGACTCTGGCGGGCACGGC | + |
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Preference number: 4 (lower is better) Translates to: PGQKQLLGLVWSVVIRSMRHDAQ*DSGGHG Trigger: GCCGTGCCCGCCAGAGTCTCACTGGGCATCATGACG...CATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATCGGTGGTGGTGTCGTaGATGAAGGAGCGTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PRLLQARSSCLAWCGVWSSVVVS*MKERLE Trigger: CTCCAAACGCTCCTTCATCCACGACACCACCACCGA...TGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | CCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCTCCAGACTCTCCACCTaGACGTCCACACCTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPGQKQLLGLVWSVVIRSSRLST*TSTPTG Trigger: CCCTGTAGGTGTGGACGTGCAGGTGGAGAGTCTGGA...GGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTATGCTCTTGTTGCTGCTaGTGGGGAAGGCCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLCSCCC*WGRPAS Trigger: AGAGGCTGGCCTTCCCCAGCAGCAGCAACAAGAGCA...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | CCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCAGGTCATGCTCTTGTTaGTGCTGCTGGGGAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PPGQKQLLGLVWSVVIRSRSCSC*CCWGRP Trigger: TGGCCTTCCCCAGCAGCAGCAACAAGAGCATGACCT...GGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAAGGCCGAGGCTTTCCTaGCCGCATCTTGGTCACATC | + |
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Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLRPRLS*PHLGHI Trigger: GATGTGACCAAGATGCGGCCAGGAAAGCCTCGGCCT...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTATGGTGGTGTCGTGGATaGAGGAGCGTTTGGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLWWCRG*RSVWSA Trigger: TGCACTCCAAACGCTCCTTCATCCACGACACCACCA...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCAAGGTCATGCTCTTGTTaGTGCTGCTGGGGAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQARSSCLAWCGVWSLGPRSCSC*CCWGRP Trigger: TGGCCTTCCCCAGCAGCAGCAACAAGAGCATGACCT...TGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTTCTTGTTGCTGCTGCTaGGGAAGGCCAGCCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QARSSCLAWCGVWSLGPCSCCCC*GRPASR Trigger: ACGAGAGGCTGGCCTTCCCCAGCAGCAGCAACAAGA...ACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAAGCCAGCCAGGCTGTTaGCCTCAGATTCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLSQPGC*PQIHCS Trigger: GCTACAGTGAATCTGAGGCCAACAGCCTGGCTGGCT...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTCCAAAGAGCAGGTCTaGGAATCCAGGGGAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGQKQLLGLVWSVVIRSMSKEQV*ESRGKW Trigger: CCACTTTCCCCTGGATTCCCAGACCTGCTCTTTGGA...CATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGCAGAATGTGGCTTCTTaGGTAGCCAGCCAGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGQKQLLGLVWSVVIRSMQNVAS*VASQAV Trigger: AACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTG...CATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | AGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATCCACTGCTCTTGTTGCTGCTaGTGGGGAAGGCCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSSCLAWCGVWSLGPCIHCSCCC*WGRPAS Trigger: AGAGGCTGGCCTTCCCCAGCAGCAGCAACAAGAGCA...GTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTCCATCCAGCATCATaGTCCTTGAATGAAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: PRLLQARSSCLAWCGVWSFHPAS*SLNEAF Trigger: GAATGCTTCATTCAAGGACCATGATGCTGGATGGAA...TGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | GGGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGCGTCATGATGCCCAGTaGGACTCTGGCGGGCACGGC | + |
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Preference number: 4 (lower is better) Translates to: GDSCEQVHKQQKTAVCSERHDAQ*DSGGHG Trigger: GCCGTGCCCGCCAGAGTCTCACTGGGCATCATGACG...CTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATAACTTCCGTTCCTTCTaGTCCTGCAGTGTGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GQKQLLGLVWSVVIRSMYNFRSF*SCSVVR Trigger: CCTGACCACACTGCAGGAGCAGAAGGAACGGAAGTT...ATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCTGTAGAAGGCCAGTCTaGAAGTCGTGTGAAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PPGQKQLLGLVWSVVIRSCRRPV*KSCETS Trigger: AGAAGTTTCACACGACTTCCAGACTGGCCTTCTACA...GGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATCAGAATGTGGCTTCTTaGGTAGCCAGCCAGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GQKQLLGLVWSVVIRSMYQNVAS*VASQAV Trigger: AACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTG...ATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTGGCCTTTCTTCTTCTaGCAGAATGTGGCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGQKQLLGLVWSVVIRSMWPFFF*QNVASW Trigger: CCAAGAAGCCACATTCTGCCAGAAGAAGAAAGGCCA...CATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATGAAGCATTCCACACATaGATGGAAGCTTCTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: GQKQLLGLVWSVVIRSMYEAFHT*MEASPG Trigger: TCCGGGAGAAGCTTCCATGCATGTGTGGAATGCTTC...ATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAAACCACGATGTTATCTaGCCTTTCTTCTTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLNHDVI*PFFFWQ Trigger: CTGCCAGAAGAAGAAAGGCCAGATAACATCGTGGTT...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATACAAATGGCTTGGCTTaGATGTTTCCAGAAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GQKQLLGLVWSVVIRSMYTNGLA*MFPEAL Trigger: CAGGGCTTCTGGAAACATCCAAGCCAAGCCATTTGT...ATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTTTCCTGGCCGCATCTTaGTCACATCAAGGTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QARSSCLAWCGVWSLGPCFLAAS*SHQGSF Trigger: AAAAGAACCTTGATGTGACCAAGATGCGGCCAGGAA...ACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATTCCATCCAGCATCATaGTCCTTGAATGAAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: LQARSSCLAWCGVWSLGPFHPAS*SLNEAF Trigger: GAATGCTTCATTCAAGGACCATGATGCTGGATGGAA...TGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | GGGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGTCCAGACTCTCCACCTaGACGTCCACACCTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GDSCEQVHKQQKTAVCSESRLST*TSTPTG Trigger: CCCTGTAGGTGTGGACGTGCAGGTGGAGAGTCTGGA...CTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATCCACCAGCATCATGGTCCTTaGATGAAGCATTCCACACAT | + |
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Preference number: 4 (lower is better) Translates to: RSSCLAWCGVWSLGPCIHQHHGP*MKHSTH Trigger: ATGTGTGGAATGCTTCATTCAAGGACCATGATGCTG...GTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | CCATGTATCCACCAGTGGATGTCCATGCCCTTTCACAGACACAGCCTTAGAATCGAAGCATTCCACACATaGATGGAAGCTTCTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PCIHQWMSMPFHRHSLRIEAFHT*MEASPG Trigger: TCCGGGAGAAGCTTCCATGCATGTGTGGAATGCTTC...GATTCTAAGGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTATTTATACAAATGGCTTaGCTTGGATGTTTCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RLLQARSSCLAWCGVWSLFIQMA*LGCFQK Trigger: CTTCTGGAAACATCCAAGCCAAGCCATTTGTATAAA...TAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GGGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAGCCAGCCAGGCTGTTaGCCTCAGATTCACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GDSCEQVHKQQKTAVCSESQPGC*PQIHCS Trigger: GCTACAGTGAATCTGAGGCCAACAGCCTGGCTGGCT...CTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | GGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGATGTACCAGCCAGTGCTaGTGTAGAAGGCCAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GILVNKFTNSRRQLSVQRCTSQC*CRRPVW Trigger: CCAGACTGGCCTTCTACAGCAGCACTGGCTGGTACA...TCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGAGGCCGAGGCTTTCCTaGCCGCATCTTGGTCACATC | + |
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Preference number: 4 (lower is better) Translates to: DSCEQVHKQQKTAVCSEKRPRLS*PHLGHI Trigger: GATGTGACCAAGATGCGGCCAGGAAAGCCTCGGCCT...CTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTGGTGGTGTCGTGGATaGAGGAGCGTTTGGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: DSCEQVHKQQKTAVCSEKWWCRG*RSVWSA Trigger: TGCACTCCAAACGCTCCTTCATCCACGACACCACCA...CTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATTCTTGTTGCTGCTGCTaGGGAAGGCCAGCCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: SRRQLSVQRSQKCELEYHSCCCC*GRPASR Trigger: ACGAGAGGCTGGCCTTCCCCAGCAGCAGCAACAAGA...ATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | CCATGTATCCACCAGTGGATGTCCATGCCCTTTCACAGACACAGCCTTAGAATCTTCTGGATCAGAAACTaGGACAAGGAGATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PCIHQWMSMPFHRHSLRIFWIRN*DKEIFS Trigger: CGAGAAGATCTCCTTGTCCCAGTTTCTGATCCAGAA...GATTCTAAGGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATTGTACCAGCCAGTGCTaGTGTAGAAGGCCAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQLSVQRSQKCELEYHCTSQC*CRRPVW Trigger: CCAGACTGGCCTTCTACAGCAGCACTGGCTGGTACA...ATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTATTTCTTTTTATACAAATaGCTTGGCTTGGATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQKQLLGLVWSVVIRSMYFFLYK*LGLDVS Trigger: GGAAACATCCAAGCCAAGCCATTTGTATAAAAAGAA...ATACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATTCGGTGGTGGTGTCGTaGATGAAGGAGCGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQLSVQRSQKCELEYHSVVVS*MKERLE Trigger: CTCCAAACGCTCCTTCATCCACGACACCACCACCGA...ATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GGGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGTGGCCTTTCTTCTTCTaGCAGAATGTGGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSCEQVHKQQKTAVCSEWPFFF*QNVASW Trigger: CCAAGAAGCCACATTCTGCCAGAAGAAGAAAGGCCA...CTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATAACTTCCGTTCCTTCTaGTCCTGCAGTGTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQLSVQRSQKCELEYHNFRSF*SCSVVR Trigger: CCTGACCACACTGCAGGAGCAGAAGGAACGGAAGTT...ATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | GGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAATCATGGTCCTTGAATaGAGCATTCCACACATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GILVNKFTNSRRQLSVQRIMVLE*SIPHMH Trigger: ATGCATGTGTGGAATGCTTCATTCAAGGACCATGAT...TCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGCAGCATCATGGTCCTTaGATGAAGCATTCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: AEDSCLFREVKSVNWNIMQHHGP*MKHSTH Trigger: ATGTGTGGAATGCTTCATTCAAGGACCATGATGCTG...CATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | TTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGTTCCTGGCCGCATCTTaGTCACATCAAGGTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTNSRRQLSVQRSQKCELFLAAS*SHQGSF Trigger: AAAAGAACCTTGATGTGACCAAGATGCGGCCAGGAA...CAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTGTAGAAGGCCAGTCTaGAAGTCGTGTGAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSCEQVHKQQKTAVCSEKCRRPV*KSCETS Trigger: AGAAGTTTCACACGACTTCCAGACTGGCCTTCTACA...CTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGAACCACGATGTTATCTaGCCTTTCTTCTTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSCEQVHKQQKTAVCSEKNHDVI*PFFFWQ Trigger: CTGCCAGAAGAAGAAAGGCCAGATAACATCGTGGTT...CTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGAGATAACAAATGGCTTGGCTTaGATGTTTCCAGAAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQLSVQRSQKCELEYHEITNGLA*MFPEAL Trigger: CAGGGCTTCTGGAAACATCCAAGCCAAGCCATTTGT...TATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATTTCTGGATCAGAAACTaGGACAAGGAGATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQLSVQRSQKCELEYHFWIRN*DKEIFS Trigger: CGAGAAGATCTCCTTGTCCCAGTTTCTGATCCAGAA...ATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | GCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGTGGAGTATTTGTCAATaGCATGGGTGTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEDSCLFREVKSVNWNIMWSICQ*HGCSGR Trigger: TCTTCCAGAACACCCATGCCATTGACAAATACTCCA...CATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAATGGAGTATTTGTCAATaGCATGGGTGTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFTNSRRQLSVQRSQKCEWSICQ*HGCSGR Trigger: TCTTCCAGAACACCCATGCCATTGACAAATACTCCA...TTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CCA 90 bp | AGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGAGATATTTATACAAATGGCTTaGCTTGGATGTTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQLSVQRSQKCELEYHEIFIQMA*LGCFQK Trigger: CTTCTGGAAACATCCAAGCCAAGCCATTTGTATAAA...TATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 90 bp | ACAGGGATGGCGGGGCCTCCAAAGGCTGGCCTCATGGTGAAGTCGTaGTCCTCTACCCTGAGCAGAGGCCGAGGCTTTCCTGGCCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TGMAGPPKAGLMVKS*SSTLSRGRGFPGRI Trigger: GATGCGGCCAGGAAAGCCTCGGCCTCTGCTCAGGGTAGAGGACCACGACTTCACCATGAGGCCAGCCTTTGGAGGCCCCGCCATCCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 90 bp | CACCTGCACGTCCACACCTACAGGGATGGCGGGGCCTCCAAAGGCTaGCCTCATGGTGAAGTCGTGGTCCTCTACCCTGAGCAGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLHVHTYRDGGASKG*PHGEVVVLYPEQRP Trigger: CGGCCTCTGCTCAGGGTAGAGGACCACGACTTCACCATGAGGCCAGCCTTTGGAGGCCCCGCCATCCCTGTAGGTGTGGACGTGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCGCAGAATGTGGCTTCTaGGGTAGCCAGCCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGQKQLLGLVWSVVIRSAECGF*GSQPGC Trigger: ACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTGC...GGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCTTGATGTACAGACGGTaGTACCAGCCAGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPGQKQLLGLVWSVVIRSLMYRR*YQPVLL Trigger: CAGCAGCACTGGCTGGTACAACCGTCTGTACATCAA...GGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 90 bp | CTTCTTCTGGCAGAATGTGGCTTCTTGGGTAGCCAGCCAGGCTGTTaGCCTCAGATTCACTGTAGCTTCCATCCAGCATCATGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLAECGFLGSQPGC*PQIHCSFHPASWSL Trigger: CAAGGACCATGATGCTGGATGGAAGCTACAGTGAATCTGAGGCCAACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTGCCAGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 90 bp | GGTGAAGTCGTGGTCCTCTACCCTGAGCAGAGGCCGAGGCTTTCCTaGCCGCATCTTGGTCACATCAAGGTTCTTTTTATACAAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GEVVVLYPEQRPRLS*PHLGHIKVLFIQMA Trigger: AGCCATTTGTATAAAAAGAACCTTGATGTGACCAAGATGCGGCCAGGAAAGCCTCGGCCTCTGCTCAGGGTAGAGGACCACGACTTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 90 bp | CCAGGCTGTTGGCCTCAGATTCACTGTAGCTTCCATCCAGCATCATaGTCCTTGAATGAAGCATTCCACACATGCATGGAAGCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGCWPQIHCSFHPAS*SLNEAFHTCMEASP Trigger: GGGAGAAGCTTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGGATGGAAGCTACAGTGAATCTGAGGCCAACAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CTCCAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATTTTATACAAATGGCTaGGCTTGGATGTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQARSSCLAWCGVWSLGPFYTNG*AWMFPE Trigger: TTCTGGAAACATCCAAGCCAAGCCATTTGTATAAAA...TGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS TCA 90 bp | GTTGGCCTCAGATTCACTGTAGCTTCCATCCAGCATCATGGTCCTTaGATGAAGCATTCCACACATGCATGGAAGCTTCTCCCGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VGLRFTVASIQHHGP*MKHSTHAWKLLPEL Trigger: AAGTTCCGGGAGAAGCTTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGGATGGAAGCTACAGTGAATCTGAGGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CCATGTATCCACCAGTGGATGTCCATGCCCTTTCACAGACACAGCCTTAGAATCTACAAATGGCTTGGCTaGGATGTTTCCAGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PCIHQWMSMPFHRHSLRIYKWLG*DVSRSP Trigger: AGGGCTTCTGGAAACATCCAAGCCAAGCCATTTGTA...GATTCTAAGGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCAGAAGCAGCTGCTTGGCCTGGTGTGGAGTGTGGTCATTAGGTCCATGTTTTTATACAAATGGCTaGGCTTGGATGTTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QARSSCLAWCGVWSLGPCFYTNG*AWMFPE Trigger: TTCTGGAAACATCCAAGCCAAGCCATTTGTATAAAA...ACATGGACCTAATGACCACACTCCACACCAGGCCAAGCAGCTGCTTCTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | GCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGGCAGAATGTGGCTTCTaGGGTAGCCAGCCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEDSCLFREVKSVNWNIMAECGF*GSQPGC Trigger: ACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTGC...CATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | CCATGTATCCACCAGTGGATGTCCATGCCCTTTCACAGACACAGCCTTAGAATCGATGTAGAGACCCATTaGGCCTTTCAGAAGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCIHQWMSMPFHRHSLRIDVETH*AFQKAF Trigger: AAAGGCCTTCTGAAAGGCCAAATGGGTCTCTACATC...GATTCTAAGGCTGTGTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS TCA 90 bp | GGCCTTTCAGAAGGCCTTTCTTTCTGGAGGAGGTCAATTCACTGTTaGGGGCCAAATGAACCACGATGTTATCTGGCCTTTCTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSEGLSFWRRSIHC*GPNEPRCYLAFLLL Trigger: CAGAAGAAGAAAGGCCAGATAACATCGTGGTTCATTTGGCCCTCAACAGTGAATTGACCTCCTCCAGAAAGAAAGGCCTTCTGAAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | TTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGTCAAAGGTCATGCTCTaGTTGCTGCTGCTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTNSRRQLSVQRSQKCELSKVML*LLLLGK Trigger: CTTCCCCAGCAGCAGCAACAAGAGCATGACCTTTGA...CAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | GGGATTCTTGTGAACAAGTTCACAAACAGCAGAAGACAGCTGTCTGTTCAGAGATACAAATGGCTTGGCTaGGATGTTTCCAGAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GILVNKFTNSRRQLSVQRYKWLG*DVSRSP Trigger: AGGGCTTCTGGAAACATCCAAGCCAAGCCATTTGTA...TCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAACTTGTTCACAAGAATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | AGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGAGATATTGATGTACAGACGGTaGTACCAGCCAGTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQLSVQRSQKCELEYHEILMYRR*YQPVLL Trigger: CAGCAGCACTGGCTGGTACAACCGTCTGTACATCAA...TATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS-3UTR CAA 90 bp | AGACAGCTGTCTGTTCAGAGAAGTCAAAAGTGTGAACTGGAATATCATGAGATAGATGTAGAGACCCATTaGGCCTTTCAGAAGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQLSVQRSQKCELEYHEIDVETH*AFQKAF Trigger: AAAGGCCTTCTGAAAGGCCAAATGGGTCTCTACATC...TATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 72 bp | GCGGGGCCTCCAAAGGCTGGCCTCATGGTGAAGTCGTaGTCCTCTACCCTGAGCAGAGGCCGAGGCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGPPKAGLMVKS*SSTLSRGRGFP Trigger: AGGAAAGCCTCGGCCTCTGCTCAGGGTAGAGGACCACGACTTCACCATGAGGCCAGCCTTTGGAGGCCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 72 bp | GCAGAATGTGGCTTCTTGGGTAGCCAGCCAGGCTGTTaGCCTCAGATTCACTGTAGCTTCCATCCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: AECGFLGSQPGC*PQIHCSFHPAS Trigger: TGATGCTGGATGGAAGCTACAGTGAATCTGAGGCCAACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 72 bp | ATGGCAGTGACCGTAATCCTCATGCTGTATAGCACATaGCCATCGGGGAACACTCGCAGCATGATGTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: MAVTVILMLYST*PSGNTRSMMLS Trigger: CGACAACATCATGCTGCGAGTGTTCCCCGATGGCCATGTGCTATACAGCATGAGGATTACGGTCACTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 ENSMUST00000131920.8 |
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| CDS GCA 72 bp | CCAGCATCATGGTCCTTGAATGAAGCATTCCACACATaGATGGAAGCTTCTCCCGGAACTTCCGTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PASWSLNEAFHT*MEASPGTSVPS Trigger: AGAAGGAACGGAAGTTCCGGGAGAAGCTTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS CCA 72 bp | CAAATGAACCACGATGTTATCTGGCCTTTCTTCTTCTaGCAGAATGTGGCTTCTTGGGTAGCCAGCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QMNHDVIWPFFF*QNVASWVASQA Trigger: AGCCTGGCTGGCTACCCAAGAAGCCACATTCTGCCAGAAGAAGAAAGGCCAGATAACATCGTGGTTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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| CDS TCA 72 bp | TTTCTGGAGGAGGTCAATTCACTGTTGAGGGCCAAATaGACCACGATGTTATCTGGCCTTTCTTCTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLEEVNSLLRAK*TTMLSGLSSSG Trigger: GCCAGAAGAAGAAAGGCCAGATAACATCGTGGTTCATTTGGCCCTCAACAGTGAATTGACCTCCTCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
||
| CDS TCA 72 bp | GAAGGCCTTTCTTTCTGGAGGAGGTCAATTCACTGTTaGGGGCCAAATGAACCACGATGTTATCTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EGLSFWRRSIHC*GPNEPRCYLAF Trigger: AAAGGCCAGATAACATCGTGGTTCATTTGGCCCTCAACAGTGAATTGACCTCCTCCAGAAAGAAAGGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
||
| CDS CCA 72 bp | TGGCCTCAGATTCACTGTAGCTTCCATCCAGCATCATaGTCCTTGAATGAAGCATTCCACACATGCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WPQIHCSFHPAS*SLNEAFHTCME Trigger: TTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGGATGGAAGCTACAGTGAATCTGAGGCCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
||
| CDS CAA 90 bp | GTATTTGTCAATGGCATGGGTGTTCTGGAAGATGTAGAGACCCATTaGGCCTTTCAGAAGGCCTTTCTTTCTGGAGGAGGTCAATTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VFVNGMGVLEDVETH*AFQKAFLSGGGQFT Trigger: AGTGAATTGACCTCCTCCAGAAAGAAAGGCCTTCTGAAAGGCCAAATGGGTCTCTACATCTTCCAGAACACCCATGCCATTGACAAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
||
| CDS TCA 72 bp | AGATTCACTGTAGCTTCCATCCAGCATCATGGTCCTTaGATGAAGCATTCCACACATGCATGGAAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFTVASIQHHGP*MKHSTHAWKLL Trigger: GAGAAGCTTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGGATGGAAGCTACAGTGAATCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024035.9 ENSMUST00000108162.8 |
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