Pregenerated sensors for GABRQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031344Ensembl transcript IDs: ENSMUST00000033711.6, ENSMUST00000114553.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGCACACAAGCTCCACATTTTCCTTGGAACACTGGGGACAAGGTaGTTTGTCTTCCCTGGCTCACAGGGCTCCTGTGAGGATCCAACG | + |
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Preference number: 1 (lower is better) Translates to: MAHKLHIFLGTLGTR*FVFPGSQGSCEDPT Trigger: CGTTGGATCCTCACAGGAGCCCTGTGAGCCAGGGAAGACAAAGCACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGCTTGTGTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | ACATGGGCACCCACTTATCTAGTAAGGCTCTGCTTCTGTGGCCCTTaGAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTCATTCTATT | + |
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Preference number: 1 (lower is better) Translates to: TWAPTYLVRLCFCGP*RSAHPGYLAVGHSI Trigger: AATAGAATGACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAGCCTTACTAGATAAGTGGGTGCCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR TCA 90 bp | GAAAGTTGGTGTACAGGCTCATCCCACTCTTATCAGGAGCCCTGCTaGGTAGGCTCCATGTTCACCAGCTGGCCTCTTCATATAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: ESWCTGSSHSYQEPC*VGSMFTSWPLHIEM Trigger: CATCTCTATATGAAGAGGCCAGCTGGTGAACATGGAGCCTACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCTGTACACCAACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CCA 90 bp | AGGAGCACTGCTCAGATGCTCTGCACTTCAACAACTACTTGGTGTTaGAGGAAGTTTGGGAGGAGACATAGGCAGCCAATAGAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: RSTAQMLCTSTTTWC*RKFGRRHRQPIERV Trigger: CACCCTCTCTATTGGCTGCCTATGTCTCCTCCCAAACTTCCTCCAACACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGTGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CCA 90 bp | AACCTCAGGAGCACTGCTCAGATGCTCTGCACTTCAACAACTACTTaGTGTTGGAGGAAGTTTGGGAGGAGACATAGGCAGCCAATAGAG | + |
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Preference number: 1 (lower is better) Translates to: NLRSTAQMLCTSTTT*CWRKFGRRHRQPIE Trigger: CTCTATTGGCTGCCTATGTCTCCTCCCAAACTTCCTCCAACACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGTGCTCCTGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | CTTCCTTCTTTCCAAGCTGTTGGACTGACTGAACCTCAGGAGCACTaGTCAGATGCTCTGCACTTCAACAACTACTTGGTGTTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LPSFQAVGLTEPQEH*SDALHFNNYLVLEE Trigger: TTCCTCCAACACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGTGCTCCTGAGGTTCAGTCAGTCCAACAGCTTGGAAAGAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR TCA 90 bp | ATCTCAGACTTAGTAAGGCTCTTCCTTCTTTCCAAGCTGTTGGACTaGCTGAACCTCAGGAGCACTGCTCAGATGCTCTGCACTTCAACA | + |
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Preference number: 1 (lower is better) Translates to: ISDLVRLFLLSKLLD*LNLRSTAQMLCTST Trigger: TGTTGAAGTGCAGAGCATCTGAGCAGTGCTCCTGAGGTTCAGTCAGTCCAACAGCTTGGAAAGAAGGAAGAGCCTTACTAAGTCTGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CCA 90 bp | AGGGGGACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTaGGGTTGCTCCATCTCAGACTTAGTAAGGCTCTTCCTTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RGTGEGKTRQNRVVK*GCSISDLVRLFLLS Trigger: GGAAAGAAGGAAGAGCCTTACTAAGTCTGAGATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGTCCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | ACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTGGGGTTaGTCCATCTCAGACTTAGTAAGGCTCTTCCTTCTTTCCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TGEGKTRQNRVVKWG*SISDLVRLFLLSKL Trigger: CAGCTTGGAAAGAAGGAAGAGCCTTACTAAGTCTGAGATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CCA 90 bp | GTCTTTTTAGGGTATGCTATATCTAGCTACATGGATATTTACAACTaGCCTCTCTGCCTCTTCTCTACTTTATCGTTGGTCCCACTACTC | + |
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Preference number: 1 (lower is better) Translates to: VFLGYAISSYMDIYN*PLCLFSTLSLVPLL Trigger: GAGTAGTGGGACCAACGATAAAGTAGAGAAGAGGCAGAGAGGCCAGTTGTAAATATCCATGTAGCTAGATATAGCATACCCTAAAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | CTTGTAAATATAACCCAGTGCGTGGGTGCTCATGAAATATATGTATaGACATGTAATGGAGTAGGTATATGTGTCTGGGTGTGTATGCAT | + |
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Preference number: 1 (lower is better) Translates to: LVNITQCVGAHEIYV*TCNGVGICVWVCMH Trigger: ATGCATACACACCCAGACACATATACCTACTCCATTACATGTGCATACATATATTTCATGAGCACCCACGCACTGGGTTATATTTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | AATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTaGAAATCAAGCTGGGCAGGAATTATATCACATATTTCTACAATA | + |
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Preference number: 1 (lower is better) Translates to: NCKTTMAKLCRDTPQ*KSSWAGIISHISTI Trigger: TATTGTAGAAATATGTGATATAATTCCTGCCCAGCTTGATTTGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR TCA 90 bp | AAATCAAGCTGGGCAGGAATTATATCACATATTTCTACAATAAAATaGTGCATTGGAAAGACAGAAAGCTGGGGTCTTTCTCAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: KSSWAGIISHISTIK*CIGKTESWGLSQTG Trigger: TCCTGTCTGAGAAAGACCCCAGCTTTCTGTCTTTCCAATGCATCATTTTATTGTAGAAATATGTGATATAATTCCTGCCCAGCTTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | ATTTGTGTGTGTATATATCTGGACATGCTTGTAAATATAACCCAGTaGGTGGGTGCTCATGAAATATATGTATGCACATGTAATGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: ICVCIYLDMLVNITQ*VGAHEIYVCTCNGV Trigger: TACTCCATTACATGTGCATACATATATTTCATGAGCACCCACGCACTGGGTTATATTTACAAGCATGTCCAGATATATACACACACAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR GCA 90 bp | ATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTTaGAGCCTTGCTATGAATAAGGATGATACAAATTGTAAGACTACA | + |
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Preference number: 1 (lower is better) Translates to: MVTISAKLGLGMSRV*SLAMNKDDTNCKTT Trigger: TGTAGTCTTACAATTTGTATCATCCTTATTCATAGCAAGGCTGCAAACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCATCCCACTCTTATCAGGAGCCCTGCTGAGTAGGCTCCATGTTCACCAGTCCGGGTGCTGTCCATaGGCTTGGCAGCTTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RLIPLLSGALLSRLHVHQSGCCP*AWQLEH Trigger: GTGCTCAAGCTGCCAAGCTCATGGACAGCACCCGGA...CTGGTGAACATGGAGCCTACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTACAACTACTTGGTGTTaGAGGAAGTTTGGGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGTTTWC*RKFGRR Trigger: TCTCCTCCCAAACTTCCTCCAACACCAAGTAGTTGT...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CAA 90 bp | CACACAAGCTCCACATTTTCCTTGGAACACTGGGGACAAGGTGCTTaGTCTTCCCTGGCTCACAGGGCTCCTGTGAGGATCCAACGATGT | + |
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Preference number: 2 (lower is better) Translates to: HTSSTFSLEHWGQGA*SSLAHRAPVRIQRC Trigger: ACATCGTTGGATCCTCACAGGAGCCCTGTGAGCCAGGGAAGACAAAGCACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGCTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCATCCCACTCTTATCAGGAGCCCTGCTGAGTAGGCTCCATGTTCACCAGGCTCCACATTTTCCTTaGAACACTGGGGACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RLIPLLSGALLSRLHVHQAPHFP*NTGDKV Trigger: CACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGC...CTGGTGAACATGGAGCCTACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CAA 90 bp | AGCTCCCTCATGACCTCCATCAATAAGCTGGTGCTTCCTGGAAAGTaGGTGTACAGGCTCATCCCACTCTTATCAGGAGCCCTGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSLMTSINKLVLPGK*VYRLIPLLSGALLS Trigger: ACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCTGTACACCAACTTTCCAGGAAGCACCAGCTTATTGATGGAGGTCATGAGGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTTACTTTTTATTGTCTTaGCCCTACACCACTACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGYFLLS*PYTTTE Trigger: TTCAGTAGTGGTGTAGGGCCAAGACAATAAAAAGTA...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR TCA 90 bp | GATGATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGATGAGCTTGGCAGCTTaGGCACAGGGAAGGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DDTNCKTTMAKLCRDTPQMSLAA*AQGRGS Trigger: ACTGCCCCTTCCCTGTGCTCAAGCTGCCAAGCTCAT...CTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTCCTCCATCAATAAGCTaGTGCTTCCTGGAAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: CLLPQGSMQVECLVRAFSPPSIS*CFLESW Trigger: CCAACTTTCCAGGAAGCACCAGCTTATTGATGGAGG...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTGTGCGTGGGTGCTCATaGAATATATGTATGCACATG | + |
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Preference number: 2 (lower is better) Translates to: CLLPQGSMQVECLVRAFSVRGCS*NICMHM Trigger: CATGTGCATACATATATTTCATGAGCACCCACGCAC...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTGTAAATATAACCCAGTaGGTGGGTGCTCATGAAATA | + |
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Preference number: 2 (lower is better) Translates to: CLLPQGSMQVECLVRAFSVNITQ*VGAHEI Trigger: TATTTCATGAGCACCCACGCACTGGGTTATATTTAC...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCTGCTAAAACAGGTCACTAGAGTCATGCTGTTTCTACAAGAACCTCCTTATAGGTTGAGTGCTTaGGAAAGCTCCCTCATGACC | + |
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Preference number: 2 (lower is better) Translates to: PTLLKQVTRVMLFLQEPPYRLSA*ESSLMT Trigger: GGTCATGAGGGAGCTTTCCCAAGCACTCAACCTATA...AGGAGGTTCTTGTAGAAACAGCATGACTCTAGTGACCTGTTTTAGCAGAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTGGGGTTGCTCCATCCACAAGGTAGATTTGTaGGCCTGTTCAAGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TGEGKTRQNRVVKWGCSIHKVDL*ACSSSQ Trigger: TTGGCTGCTTGAACAGGCCCACAAATCTACCTTGTG...GATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGACAATGGCCAAACTCTaGAGAGACACCCCACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKTMAKL*RDTPQC Trigger: GCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | GATGATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGACTTCAACAACTACTTaGTGTTGGAGGAAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: DDTNCKTTMAKLCRDTPQTSTTT*CWRKFG Trigger: CCCAAACTTCCTCCAACACCAAGTAGTTGTTGAAGT...CTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTGCAAATAGAGTAGTAAAGTaGGGTTGCTCCATCTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: IQIVRLQWPNSAETPHSANRVVK*GCSISD Trigger: GTCTGAGATGGAGCAACCCCACTTTACTACTCTATT...TGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR CAA 90 bp | ACCCGGGTTACCTGGCTGTTGGTCATTCTATTTTCTTACTTTTTATaGTCTTGGCCCTACACCACTACTGAAGATCTGTATGTATGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TRVTWLLVILFSYFL*SWPYTTTEDLYVCD Trigger: GTCACATACATACAGATCTTCAGTAGTGGTGTAGGGCCAAGACAATAAAAAGTAAGAAAATAGAATGACCAACAGCCAGGTAACCCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTGGGGTTGCTCCATCGACATGCACATTCTATaGATGTATGCAGAATGCATT | + |
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Preference number: 2 (lower is better) Translates to: TGEGKTRQNRVVKWGCSIDMHIL*MYAECI Trigger: AATGCATTCTGCATACATTCATAGAATGTGCATGTC...GATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTACACTGGGGACAAGGTaGTTTGTCTTCCCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YIQSKESSLGMVTISAKLTLGTR*FVFPGS Trigger: TGAGCCAGGGAAGACAAAGCACCTTGTCCCCAGTGT...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | ATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTGCACTAGAATTGTGCCTATaGATGGACAAGAGACAATAC | + |
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Preference number: 2 (lower is better) Translates to: IQIVRLQWPNSAETPHSALELCL*MDKRQY Trigger: GTATTGTCTCTTGTCCATGCATAGGCACAATTCTAG...TGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGGTCTCCAGATCCAAGTaGACATCTAACGAATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKVSRSK*TSNECS Trigger: TGAGCATTCGTTAGATGTGCACTTGGATCTGGAGAC...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAGGTCACTAGAGTCATaGTGTTTCTACAAGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKRSLES*CFYKNL Trigger: GAGGTTCTTGTAGAAACAGCATGACTCTAGTGACCT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAAACTGCTCAGATGCTCTaGACTTCAACAACTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: PEFYTDDLDQLAYFIIEETAQML*TSTTTW Trigger: CCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGT...TTCTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAAACCAATAGGTCCACCTaGCTCTCAAGAACTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PEFYTDDLDQLAYFIIEETNRST*LSRTEK Trigger: CTTTTCAGTTCTTGAGAGCCAGGTGGACCTATTGGT...TTCTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAATTGTGCCTATGCATaGACAAGAGACAATACTGAG | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKNCAYA*TRDNTE Trigger: CTCAGTATTGTCTCTTGTCCATGCATAGGCACAATT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGATTGTAAGACTACAATaGCCAAACTCTGCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKIVRLQ*PNSAET Trigger: TGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAAT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTAGGAATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTCCATTTTTACTTCTCTaGGTCTTTCCCGGAATCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLGMVTISAKLGLGMSRVPFLLL*VFPGIK Trigger: CTTGATTCCGGGAAAGACTCAGAGAAGTAAAAATGG...AACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGCATTCTATGAATGTATaGAGAATGCATTCAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKHSMNV*RMHSAL Trigger: CAGAGCTGAATGCATTCTGCATACATTCATAGAATG...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR GCA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTTACAACTGGCCTCTCTaGCTCTTCTCTACTTTATCG | + |
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Preference number: 2 (lower is better) Translates to: YIQSKESSLGMVTISAKLYNWPL*LFSTLS Trigger: CGATAAAGTAGAGAAGAGGCAGAGAGGCCAGTTGTA...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTGCTCTCCCTTTAATCTaGACCGTTTTATGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: YIQSKESSLGMVTISAKLALPLI*TVLCWV Trigger: AACCCAGCATAAAACGGTCCAGATTAAAGGGAGAGC...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGATACAAGGAGAGATCTaGCAACTTTCAAGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQSSTQMTLTSWHILLLKIQGEI*QLSSKK Trigger: TTTCTTACTTGAAAGTTGCCAGATCTCTCCTTGTAT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAAAATCTCAGCAAAACTTaGTTTAGGTATGTCAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PEFYTDDLDQLAYFIIEENLSKT*FRYVKS Trigger: ACTCTTGACATACCTAAACCAAGTTTTGCTGAGATT...TTCTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | CCCACTTATCTAGTAAGGCTCTGCTTCTGTGGCCCTTaGAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PTYLVRLCFCGP*RSAHPGYLAVG Trigger: ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAGCCTTACTAGATAAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR TCA 72 bp | CATAGGCAGCCAATAGAGAGGGTGTGCCTGTATGGCTaGAAAGGGGCTGAGGGCAGCAGGATACAGGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HRQPIERVCLYG*KGAEGSRIQGL Trigger: TAAGCCCTGTATCCTGCTGCCCTCAGCCCCTTTTCAGCCATACAGGCACACCCTCTCTATTGGCTGCCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR TCA 72 bp | TGTACAGGCTCATCCCACTCTTATCAGGAGCCCTGCTaGGTAGGCTCCATGTTCACCAGCTGGCCTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CTGSSHSYQEPC*VGSMFTSWPLH Trigger: ATGAAGAGGCCAGCTGGTGAACATGGAGCCTACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCTGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | AAGCTCCACATTTTCCTTGGAACACTGGGGACAAGGTaGTTTGTCTTCCCTGGCTCACAGGGCTCCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLHIFLGTLGTR*FVFPGSQGSCE Trigger: CTCACAGGAGCCCTGTGAGCCAGGGAAGACAAAGCACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR TCA 72 bp | TTAGTAAGGCTCTTCCTTCTTTCCAAGCTGTTGGACTaGCTGAACCTCAGGAGCACTGCTCAGATGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVRLFLLSKLLD*LNLRSTAQMLC Trigger: GCAGAGCATCTGAGCAGTGCTCCTGAGGTTCAGTCAGTCCAACAGCTTGGAAAGAAGGAAGAGCCTTACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | TTCCAAGCTGTTGGACTGACTGAACCTCAGGAGCACTaGTCAGATGCTCTGCACTTCAACAACTACTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQAVGLTEPQEH*SDALHFNNYLV Trigger: CACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGTGCTCCTGAGGTTCAGTCAGTCCAACAGCTTGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | AGCACTGCTCAGATGCTCTGCACTTCAACAACTACTTaGTGTTGGAGGAAGTTTGGGAGGAGACATAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: STAQMLCTSTTT*CWRKFGRRHRQ Trigger: CTGCCTATGTCTCCTCCCAAACTTCCTCCAACACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGCAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | ATCTTTAAGCATGGCACACAAGCTCCACATTTTCCTTaGAACACTGGGGACAAGGTGCTTTGTCTTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFKHGTQAPHFP*NTGDKVLCLPW Trigger: CCAGGGAAGACAAAGCACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGCTTGTGTGCCATGCTTAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | GCTCAGATGCTCTGCACTTCAACAACTACTTGGTGTTaGAGGAAGTTTGGGAGGAGACATAGGCAGCCAATA | + |
|
Preference number: 3 (lower is better) Translates to: AQMLCTSTTTWC*RKFGRRHRQPI Trigger: TATTGGCTGCCTATGTCTCCTCCCAAACTTCCTCCAACACCAAGTAGTTGTTGAAGTGCAGAGCATCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | TCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTaGCTGTTGGTCATTCTATTTTCTTACTTTTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SVALAGQLTRVT*LLVILFSYFLL Trigger: CAATAAAAAGTAAGAAAATAGAATGACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTAGGAATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTTGGGGACAAGGTGCTTaGTCTTCCCTGGCTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLGMVTISAKLGLGMSRVWGQGA*SSLAHR Trigger: CCTGTGAGCCAGGGAAGACAAAGCACCTTGTCCCCA...AACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | CATCTAACGAATGCTCAGATTCCAGAGGAGAGCTTTTaGTCTCCCTTTAATCTGGACCGTTTTATGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HLTNAQIPEESF*SPFNLDRFMLG Trigger: ACCCAGCATAAAACGGTCCAGATTAAAGGGAGAGCAAAAGCTCTCCTCTGGAATCTGAGCATTCGTTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | GATGATACAAATTGTAAGACTACAATGGCCAAACTCTaGAGAGACACCCCACAGTGCAAATCAAGCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DDTNCKTTMAKL*RDTPQCKSSWA Trigger: TGCCCAGCTTGATTTGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | AAGGAATGTTCAAACTCCAAACACAAGGTAGATTTGTaGGCCTGTTCAAGCAGCCAAGCCTGTCCAAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: KECSNSKHKVDL*ACSSSQACPRI Trigger: AATCCTTGGACAGGCTTGGCTGCTTGAACAGGCCCACAAATCTACCTTGTGTTTGGAGTTTGAACATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | GGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTaGGGTTGCTCCATCTCAGACTTAGTAAGGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GEGKTRQNRVVK*GCSISDLVRLF Trigger: GAAGAGCCTTACTAAGTCTGAGATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | ACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTaGAAATCAAGCTGGGCAGGAATTATATCACATATT | + |
|
Preference number: 3 (lower is better) Translates to: TTMAKLCRDTPQ*KSSWAGIISHI Trigger: AATATGTGATATAATTCCTGCCCAGCTTGATTTGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTGTGCCTATGCATGGACAAGAGACAATACTGAGATCATCTATTCAGTACAGCTCCACATTTTCCTaGGAACACTGGGGACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RIVPMHGQETILRSSIQYSSTFS*EHWGQG Trigger: ACCTTGTCCCCAGTGTTCCAAGGAAAATGTGGAGCT...GTACTGAATAGATGATCTCAGTATTGTCTCTTGTCCATGCATAGGCACAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | ATAACCCAGTGCGTGGGTGCTCATGAAATATATGTATaGACATGTAATGGAGTAGGTATATGTGTCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITQCVGAHEIYV*TCNGVGICVWV Trigger: CACCCAGACACATATACCTACTCCATTACATGTGCATACATATATTTCATGAGCACCCACGCACTGGGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | ATATCTAGCTACATGGATATTTACAACTGGCCTCTCTaGCTCTTCTCTACTTTATCGTTGGTCCCACTACTC | + |
|
Preference number: 3 (lower is better) Translates to: ISSYMDIYNWPL*LFSTLSLVPLL Trigger: GAGTAGTGGGACCAACGATAAAGTAGAGAAGAGGCAGAGAGGCCAGTTGTAAATATCCATGTAGCTAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR TCA 72 bp | GGAGTGCTTAGTGAGGGCTTTCAGTACTTAATAGCTTaGAAGCATTGCTGCTGTATATACAGAGTAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GVLSEGFQYLIA*KHCCCIYRVRN Trigger: ATTCCTTACTCTGTATATACAGCAGCAATGCTTTCAAGCTATTAAGTACTGAAAGCCCTCACTAAGCACTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | ATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTaGTTTAGGTATGTCAAGAGTTTGCAGCCTTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ILIRNGHNLSKT*FRYVKSLQPCY Trigger: ATAGCAAGGCTGCAAACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR-3UTR CAA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTAGTAGTAAAGTGGGGTaGCTCCATCTCAGACTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: YIQSKESSLGMVTISAKLSSKVG*LHLRLS Trigger: ACTAAGTCTGAGATGGAGCAACCCCACTTTACTACT...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CCA 72 bp | AATGTTACTAACTTAATAGCCACTGAAAGACTCCTCTaGTATTATCTGAAGTTGGCTTCTATTACTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NVTNLIATERLL*YYLKLASITVQ Trigger: CTGCACAGTAATAGAAGCCAACTTCAGATAATACCAGAGGAGTCTTTCAGTGGCTATTAAGTTAGTAACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR GCA 72 bp | ATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTTaGAGCCTTGCTATGAATAAGGATGATACAAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISAKLGLGMSRV*SLAMNKDDTNC Trigger: ACAATTTGTATCATCCTTATTCATAGCAAGGCTGCAAACTCTTGACATACCTAAACCAAGTTTTGCTGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTAGTGGAATTTCGGGGTaGGACTGGGGCCGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGSGISG*DWGRYS Trigger: AGAGTAACGGCCCCAGTCCCACCCCGAAATTCCACT...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTATCCAGGGAACAGGCTaGTGTTGTGGTAAGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGIQGTG*CCGKSD Trigger: ATCCGACTTACCACAACAGCAGCCTGTTCCCTGGAT...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTGGGCAACAACTCTCCTaGGTTTCCTGCATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGGQQLS*VSCIFC Trigger: ACAGAAGATGCAGGAAACCCAGGAGAGTTGTTGCCC...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCATCCCACTCTTATCAGGAGCCCTGCTGAGTAGGCTCCATGTTCACCAGTCTGAGGTAGCCAGCTaGGCCTGCTCTGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLIPLLSGALLSRLHVHQSEVAS*ACSDVN Trigger: GTTCACATCAGAGCAGGCCCAGCTGGCTACCTCAGA...CTGGTGAACATGGAGCCTACTCAGCAGGGCTCCTGATAAGAGTGGGATGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTCTGCGGACTTCCCTCTaGACCTGGAACTTCACTATC | + |
|
Preference number: 4 (lower is better) Translates to: CLLPQGSMQVECLVRAFSLRTSL*TWNFTI Trigger: GATAGTGAAGTTCCAGGTTCAGAGGGAAGTCCGCAG...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTGGGGTTGCTCCATCAGGAGAGAATGGTGGTaGGGACCGTGGGCCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGEGKTRQNRVVKWGCSIRREWW*GPWANR Trigger: TCTATTGGCCCACGGTCCTCACCACCATTCTCTCCT...GATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGCCAGATGAGCCTGCATaGGGCTGTCAGGAAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYEPDEPA*GCQEGD Trigger: GTCCCCTTCCTGACAGCCCCATGCAGGCTCATCTGG...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| 3UTR CAA 72 bp | ATGACCTCCATCAATAAGCTGGTGCTTCCTGGAAAGTaGGTGTACAGGCTCATCCCACTCTTATCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MTSINKLVLPGK*VYRLIPLLSGA Trigger: GGCTCCTGATAAGAGTGGGATGAGCCTGTACACCAACTTTCCAGGAAGCACCAGCTTATTGATGGAGGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAATCCTGGCTTGCCAGATaGGCCTGCATGGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKSWLAR*ACMGLS Trigger: TGACAGCCCCATGCAGGCTCATCTGGCAAGCCAGGA...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | ATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTGCAGGGGCCGTTACTCTCTaGCAGCCAAGTCCTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQIVRLQWPNSAETPHSAGAVTL*QPSPNE Trigger: CTCATTAGGACTTGGCTGGCAGAGAGTAACGGCCCC...TGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGCCAGATGAGCCTGCATaGGGCTGTCAGGAAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQSSTQMTLTSWHILLLKPDEPA*GCQEGD Trigger: GTCCCCTTCCTGACAGCCCCATGCAGGCTCATCTGG...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTCTGAGGTAGCCAGCTaGGCCTGCTCTGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYSEVAS*ACSDVN Trigger: GTTCACATCAGAGCAGGCCCAGCTGGCTACCTCAGA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGCTGCGGACTTCCCTCTaGACCTGGAACTTCACTATC | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVLRTSL*TWNFTI Trigger: GATAGTGAAGTTCCAGGTTCAGAGGGAAGTCCGCAG...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | AGAATTGTGCCTATGCATGGACAAGAGACAATACTGAGATCATCTATTCAGTACTCCTGGCTTGCCAGATaGGCCTGCATGGGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIVPMHGQETILRSSIQYSWLAR*ACMGLS Trigger: TGACAGCCCCATGCAGGCTCATCTGGCAAGCCAGGA...GTACTGAATAGATGATCTCAGTATTGTCTCTTGTCCATGCATAGGCACAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGAAGAGAACCCTTCATTaGAGGAGCACCCAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVKRTLH*RSTQGL Trigger: CAAGCCCTGGGTGCTCCTTCAATGAAGGGTTCTCTT...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGGGGGCCGTTACTCTCTaGCAGCCAAGTCCTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYEGAVTL*QPSPNE Trigger: CTCATTAGGACTTGGCTGGCAGAGAGTAACGGCCCC...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | ATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTGCACCTGCACAAGGTAACTaGGGACTTCCCTCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: IQIVRLQWPNSAETPHSAPAQGN*GLPSEP Trigger: AGGTTCAGAGGGAAGTCCGCAGTTACCTTGTGCAGG...TGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAGTGGAATTTCGGGGTaGGACTGGGGCCGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYESGISG*DWGRYS Trigger: AGAGTAACGGCCCCAGTCCCACCCCGAAATTCCACT...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAGTGTGGCTGCTTCCATaGCCATGGCTCTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKVWLLP*PWLSSE Trigger: CTCTGAGGAGAGCCATGGCCATGGAAGCAGCCACAC...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGTTGAGCCTTCCAGTGTaGCTGCTTCCATGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYELSLPV*LLPWPW Trigger: CCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAA...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGCACATAGATAGATACTaGCACAGGCACAGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVHIDRY*HRHRSS Trigger: GGAGCTCCTGTGCCTGTGTCAGTATCTATCTATGTG...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAAGGAGAGAATGGTGGTaGGGACCGTGGGCCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKRREWW*GPWANR Trigger: TCTATTGGCCCACGGTCCTCACCACCATTCTCTCCT...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATATCCAGGGAACAGGCTaGTGTTGTGGTAAGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYIQGTG*CCGKSD Trigger: ATCCGACTTACCACAACAGCAGCCTGTTCCCTGGAT...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTTTGATACAGGAAATATaGGGGAGTTTATCCCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLLPQGSMQVECLVRAFSLIQEI*GSLSRI Trigger: TATGCGGGATAAACTCCCCCATATTTCCTGTATCAA...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGGGGCAACAACTCTCCTaGGTTTCCTGCATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVGQQLS*VSCIFC Trigger: ACAGAAGATGCAGGAAACCCAGGAGAGTTGTTGCCC...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTCAGGCTTTCTCCAGTaGCCAATTGAGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYSGFLQ*PIESGL Trigger: CAAGCCAGACTCAATTGGCCACTGGAGAAAGCCTGA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTCTTGCACACACCTCTaGCTAATCTGGAGCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYSCTHL*LIWSLS Trigger: GCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| 3UTR CAA 72 bp | AGTAAGGAATGTTCAAACTCCAAACACAAGGTAGATTaGTGGGCCTGTTCAAGCAGCCAAGCCTGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKECSNSKHKVD*WACSSSQACPR Trigger: CCTTGGACAGGCTTGGCTGCTTGAACAGGCCCACAAATCTACCTTGTGTTTGGAGTTTGAACATTCCTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAACCTGCACAAGGTAACTaGGGACTTCCCTCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKPAQGN*GLPSEP Trigger: AGGTTCAGAGGGAAGTCCGCAGTTACCTTGTGCAGG...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGCTCTCCTGGGTTTCCTaGATCTTCTGTGATTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYELSWVS*IFCDYA Trigger: GGCGTAATCACAGAAGATGCAGGAAACCCAGGAGAG...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTCCCAACTTGCTTCTTaGACACACCTCTGGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVSQLAS*THLWLI Trigger: GATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGA...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | TCATTAGGAATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTGTGTGGCTGCTTCCATaGCCATGGCTCTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGMVTISAKLGLGMSRVVWLLP*PWLSSE Trigger: CTCTGAGGAGAGCCATGGCCATGGAAGCAGCCACAC...AACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTCGGACATCATATGTTaGCAGCACCCTGTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYSDIIC*QHPVQN Trigger: ATTTTGGACAGGGTGCTGTCAACATATGATGTCCGA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGTCGCACTGTCCCATCTaGGTGAAGTTGAAATACACG | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYESHCPI*VKLKYT Trigger: CGTGTATTTCAACTTCACCCAGATGGGACAGTGCGA...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTCTGCTAAAACAGGTCACTAGAGTCATGCTGTTTCTACAAGAACCTCCTAGCCCATCAGTAATGTaGATGGCATTATCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLKQVTRVMLFLQEPPSPSVM*MALSSS Trigger: GGAAGATGATAATGCCATCCACATTACTGATGGGCT...AGGAGGTTCTTGTAGAAACAGCATGACTCTAGTGACCTGTTTTAGCAGAGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGGATAGCACATATACCTACCTGAATACATACATAGTCATCCTCAGAGATTTGAGCCTTCCAGTGTaGCTGCTTCCATGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CMDSTYTYLNTYIVILRDLSLPV*LLPWPW Trigger: CCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAA...ATCTCTGAGGATGACTATGTATGTATTCAGGTAGGTATATGTGCTATCCATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGAGGGTAAGACAAGACAGAATAGAGTAGTAAAGTGGGGTTGCTCCATCGCACAAAGGCATCTTTaGTATTCACAAAGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGEGKTRQNRVVKWGCSIAQRHL*YSQSSS Trigger: ACTGCTACTTTGTGAATAGCAAAGATGCCTTTGTGC...GATGGAGCAACCCCACTTTACTACTCTATTCTGTCTTGTCTTACCCTCTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAATCAAGGTCCCAACTTaGTTCTTGCACACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKIKVPT*FLHTPL Trigger: CAGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGAT...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGGGTCAGGTTTAGGTTaGTTTCATAGTAAGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYGSGLG*FHSKLS Trigger: GCTTAGCTTACTATGAAACCAACCTAAACCTGACCC...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATAGCCCATCAGTAATGTaGATGGCATTATCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYSPSVM*MALSSS Trigger: GGAAGATGATAATGCCATCCACATTACTGATGGGCT...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGCTGTCCAAAATCTTTTaGACCACAGCTTCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVLSKIF*TTASFA Trigger: TGCAAATGAAGCTGTGGTTCAAAAGATTTTGGACAG...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | GATGATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGCTGTCCAAAATCTTTTaGACCACAGCTTCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DDTNCKTTMAKLCRDTPQLSKIF*TTASFA Trigger: TGCAAATGAAGCTGTGGTTCAAAAGATTTTGGACAG...CTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGTCGGACATCATATGTTaGCAGCACCCTGTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSTQMTLTSWHILLLKSDIIC*QHPVQN Trigger: ATTTTGGACAGGGTGCTGTCAACATATGATGTCCGA...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAATCCATAGGGAATTTTTaGAGATCCAGGGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKSIGNF*RSREQA Trigger: AGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGA...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGAATAGTTACCCTGGCTaGAGAGGAATCATAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVNSYPG*RGIIVH Trigger: ATGAACTATGATTCCTCTGCAGCCAGGGTAACTATT...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | TCATTAGGAATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTCTCTCCTGGGTTTCCTaGATCTTCTGTGATTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGMVTISAKLGLGMSRVLSWVS*IFCDYA Trigger: GGCGTAATCACAGAAGATGCAGGAAACCCAGGAGAG...AACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGAGCTCCTCCAAAATTTaGTCTAAGTCGGACATCATA | + |
|
Preference number: 4 (lower is better) Translates to: KPEETIKETYHSISAAVVSSSKI*SKSDII Trigger: TATGATGTCCGACTTAGACCAAATTTTGGAGGAGCT...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAATCGCACTGTCCCATCTaGGTGAAGTTGAAATACACG | + |
|
Preference number: 4 (lower is better) Translates to: PEFYTDDLDQLAYFIIEESHCPI*VKLKYT Trigger: CGTGTATTTCAACTTCACCCAGATGGGACAGTGCGA...TTCTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTTGATACAGGAAATATaGGGGAGTTTATCCCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYLIQEI*GSLSRI Trigger: TATGCGGGATAAACTCCCCCATATTTCCTGTATCAA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAGCCATGAAAGTGAATaGTACACTCAGGCACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYESHESE*YTQALF Trigger: AAACAGTGCCTGAGTGTACCATTCACTTTCATGGCT...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR TCA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATATAGTTCATCCAAAATaGTATCCAGGAGAGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEETIKETYHSISAAVVYIVHPK*YPGENG Trigger: ACCATTCTCTCCTGGATATCATTTTGGATGAACTAT...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGTCCACAGTTACATCATaGACAAAGGCATCTTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EETIKETYHSISAAVVYESTVTS*TKASLL Trigger: TAGCAAAGATGCCTTTGTGCATGATGTAACTGTGGA...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | TTGCAGTTTAACTGCTCTCATTGCAGCACATTAGGGCAAAATAGTCTTTTTAGGTCCATAGGGAATTTTTaGAGATCCAGGGAACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFNCSHCSTLGQNSLFRSIGNF*RSREQA Trigger: AGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGA...CCTAAAAAGACTATTTTGCCCTAATGTGCTGCAATGAGAGCAGTTAAACTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTTCAGGCTTTCTCCAGTaGCCAATTGAGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YIQSKESSLGMVTISAKLSGFLQ*PIESGL Trigger: CAAGCCAGACTCAATTGGCCACTGGAGAAAGCCTGA...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR GCA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAGCACAAAGGCATCTTTaGTATTCACAAAGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETIKETYHSISAAVVYEKAQRHL*YSQSSS Trigger: ACTGCTACTTTGTGAATAGCAAAGATGCCTTTGTGC...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR GCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGAATAGTTACCCTGGCTaGAGAGGAATCATAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSTQMTLTSWHILLLKNSYPG*RGIIVH Trigger: ATGAACTATGATTCCTCTGCAGCCAGGGTAACTATT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCTGGACATGCTTGTAAATATAACCCAGTGCGTGGGTGCTCATGAAATAAGCCATGAAAGTGAATaGTACACTCAGGCACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IYLDMLVNITQCVGAHEISHESE*YTQALF Trigger: AAACAGTGCCTGAGTGTACCATTCACTTTCATGGCT...TATTTCATGAGCACCCACGCACTGGGTTATATTTACAAGCATGTCCAGATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGAGTTCTACACAGATGACCTTGACCAGCTGGCATATTTTATTATTGAAGATAGTTCATCCAAAATaGTATCCAGGAGAGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSTQMTLTSWHILLLKIVHPK*YPGENG Trigger: ACCATTCTCTCCTGGATATCATTTTGGATGAACTAT...CTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CAA 72 bp | GTGAAAATTCTGACCCAGAGTTCTACACAGATGACCTaGACCAGCTGGCATATTTTATTATTGAAGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: VKILTQSSTQMT*TSWHILLLKNT Trigger: GGTATTCTTCAATAATAAAATATGCCAGCTGGTCAAGGTCATCTGTGTAGAACTCTGGGTCAGAATTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CCA 90 bp | TCATTAGGAATGGTCACAATCTCAGCAAAACTTGGTTTAGGTATGTCAAGAGTTAGCTCCTCCAAAATTTaGTCTAAGTCGGACATCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLGMVTISAKLGLGMSRVSSSKI*SKSDII Trigger: TATGATGTCCGACTTAGACCAAATTTTGGAGGAGCT...AACTCTTGACATACCTAAACCAAGTTTTGCTGAGATTGTGACCATTCCTAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| 3UTR CAA 72 bp | AAGTTGGCTTCTATTACTGTGCAGAATTCTGGTAAGTaGCCTTTACTAATGAATACTGATCTCAGGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: KLASITVQNSGK*PLLMNTDLRDI Trigger: TATATCCCTGAGATCAGTATTCATTAGTAAAGGCAACTTACCAGAATTCTGCACAGTAATAGAAGCCAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTTGCTACCACCACTTCTaGGTAGCGGTATCGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGCYHHF*VAVSGN Trigger: GTTGCCCGATACCGCTACCAAGAAGTGGTGGTAGCA...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS TCA 90 bp | TCTGATGTGAACACCAAGGATCCTAGACTTTCCTGGCTTGCCAGATaGGCCTGCATGGGGCTGTCAGGAAGGGGACCAGCTCTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDVNTKDPRLSWLAR*ACMGLSGRGPALSS Trigger: AGAAGACAGAGCTGGTCCCCTTCCTGACAGCCCCATGCAGGCTCATCTGGCAAGCCAGGAAAGTCTAGGATCCTTGGTGTTCACATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 90 bp | TCTTGCACACACCTCTGGCTAATCTGGAGCTTGAGCCTTCCAGTGTaGCTGCTTCCATGGCCATGGCTCTCCTCAGAGCTTAGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCTHLWLIWSLSLPV*LLPWPWLSSELRLS Trigger: AGAAAGCCTAAGCTCTGAGGAGAGCCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTCTGTGGCCCTTGCAGGTCAGCTCACCCGGGTTACCTGGCTGTTGGTGATCGGCTGTGGATTTaGATGGGGATAATACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCFCGPCRSAHPGYLAVGDRLWI*MGIILS Trigger: TGACAGTATTATCCCCATCAAAATCCACAGCCGATC...ACCAACAGCCAGGTAACCCGGGTGAGCTGACCTGCAAGGGCCACAGAAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS TCA 90 bp | CGGGACCATCTATCAACCTTGGGGACCCGGTTAGGTTTAAAGAGCTaGAAAGAGAACCCTTCATTGAAGGAGCACCCAGGGCTTGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDHLSTLGTRLGLKS*KENPSLKEHPGLGE Trigger: CTCCCCAAGCCCTGGGTGCTCCTTCAATGAAGGGTTCTCTTTTCAGCTCTTTAAACCTAACCGGGTCCCCAAGGTTGATAGATGGTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS GCA 90 bp | GCAGAAGAGAGTAGACTGAGACTTTCTGAGGTAGCCAGCTGGGCCTaGTCTGATGTGAACACCAAGGATCCTAGACTTTCCTGGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEESRLRLSEVASWA*SDVNTKDPRLSWLA Trigger: GGCAAGCCAGGAAAGTCTAGGATCCTTGGTGTTCACATCAGAGCAGGCCCAGCTGGCTACCTCAGAAAGTCTCAGTCTACTCTCTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 90 bp | TTATCAAGGTCCCAACTTGCTTCTTGCACACACCTCTGGCTAATCTaGAGCTTGAGCCTTCCAGTGTGGCTGCTTCCATGGCCATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSQLASCTHLWLI*SLSLPVWLLPWPWL Trigger: GAGCCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS CCA 90 bp | CTTGAGGCAGAAGAGAGTAGACTGAGACTTTCTGAGGTAGCCAGCTaGGCCTGCTCTGATGTGAACACCAAGGATCCTAGACTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAEESRLRLSEVAS*ACSDVNTKDPRLSW Trigger: CCAGGAAAGTCTAGGATCCTTGGTGTTCACATCAGAGCAGGCCCAGCTGGCTACCTCAGAAAGTCTCAGTCTACTCTCTTCTGCCTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGAGGAGCACCCAGGGCTaGGGGAGCAATTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPEETIKETYHSISAAVVRSTQG*GSNSPQ Trigger: CTGAGGAGAATTGCTCCCCAAGCCCTGGGTGCTCCT...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS GCA 90 bp | GGATTGTTTGTCCATAGGGAATTTTTGCAGATCCAGGGAACAGGCTaGTGTTGTGGTAAGTCGGATGCCATATCGCACTGTCCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLFVHREFLQIQGTG*CCGKSDAISHCPIW Trigger: CCAGATGGGACAGTGCGATATGGCATCCGACTTACCACAACAGCAGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGACAAACAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 90 bp | CCCAGAGCTTCTCATGCATCCGATAATCCAGGGTCAGGTTTAGGTTaGTTTCATAGTAAGCTAAGCGTGTGTCCTTCCAGGTCTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRASHASDNPGSGLG*FHSKLSVCPSRSDA Trigger: TGCATCAGACCTGGAAGGACACACGCTTAGCTTACTATGAAACCAACCTAAACCTGACCCTGGATTATCGGATGCATGAGAAGCTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 90 bp | GGCTGCTGTTGTGGTAAGTCGGATGCCATATCGCACTGTCCCATCTaGGTGAAGTTGAAATACACGATTCTCCACAGTTACATCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GCCCGKSDAISHCPI*VKLKYTILHSYIMH Trigger: GTGCATGATGTAACTGTGGAGAATCGTGTATTTCAACTTCACCCAGATGGGACAGTGCGATATGGCATCCGACTTACCACAACAGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 90 bp | ATCTCAATTTTATCAAGGTCCCAACTTGCTTCTTGCACACACCTCTaGCTAATCTGGAGCTTGAGCCTTCCAGTGTGGCTGCTTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ISILSRSQLASCTHL*LIWSLSLPVWLLPW Trigger: CCATGGAAGCAGCCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGATAAAATTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | TGCTTACTACCACAGGGTAGCATGCAGGTGGAGTGCTTAGTGAGGGCTTTCAGTCTCCAGCTTGCAGGATaGTTTGTCCATAGGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CLLPQGSMQVECLVRAFSLQLAG*FVHREF Trigger: AAATTCCCTATGGACAAACAATCCTGCAAGCTGGAG...ACTGAAAGCCCTCACTAAGCACTCCACCTGCATGCTACCCTGTGGTAGTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS TCA 90 bp | AGGAATCATAGTTCATCCAAAATGATATCCAGGAGAGAATGGTGGTaGGGACCGTGGGCCAATAGACCTGCACAAGGTAACTGCGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RNHSSSKMISRREWW*GPWANRPAQGNCGL Trigger: AAGTCCGCAGTTACCTTGTGCAGGTCTATTGGCCCACGGTCCTCACCACCATTCTCTCCTGGATATCATTTTGGATGAACTATGATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGTGCTACCACCACTTCTaGGTAGCGGTATCGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EETIKETYHSISAAVVYECYHHF*VAVSGN Trigger: GTTGCCCGATACCGCTACCAAGAAGTGGTGGTAGCA...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | CCCACTCTGCTAAAACAGGTCACTAGAGTCATGCTGTTTCTACAAGAACCTCCTCCAATTGAGTCTGGCTaGAGGCAGAAGAGAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PTLLKQVTRVMLFLQEPPPIESG*RQKRVD Trigger: GTCTACTCTCTTCTGCCTCAAGCCAGACTCAATTGG...AGGAGGTTCTTGTAGAAACAGCATGACTCTAGTGACCTGTTTTAGCAGAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS GCA 90 bp | TCATCCTGTAAGATCTCAATTTTATCAAGGTCCCAACTTGCTTCTTaGACACACCTCTGGCTAATCTGGAGCTTGAGCCTTCCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCKISILSRSQLAS*THLWLIWSLSLPVW Trigger: CCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGATAAAATTGAGATCTTACAGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | AAACCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGCCAATTGAGTCTGGCTaGAGGCAGAAGAGAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPEETIKETYHSISAAVVPIESG*RQKRVD Trigger: GTCTACTCTCTTCTGCCTCAAGCCAGACTCAATTGG...CACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS TCA 90 bp | AAGTACACTTCCTTGCTGGTAATTGTTCTCCCCAGGTACGTGTACTaGGGGATATGCAGCCCATCAGTAATGTGGATGGCATTATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KYTSLLVIVLPRYVY*GICSPSVMWMALSS Trigger: AGATGATAATGCCATCCACATTACTGATGGGCTGCATATCCCTCAGTACACGTACCTGGGGAGAACAATTACCAGCAAGGAAGTGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGTCGGACATCATATGTaGACAGCACCCTGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEETIKETYHSISAAVVYVGHHM*TAPCPK Trigger: TTTTGGACAGGGTGCTGTCAACATATGATGTCCGAC...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGGTCCATAGGGAATTTTaGCAGATCCAGGGAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EETIKETYHSISAAVVYEVHREF*QIQGTG Trigger: GCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGAC...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATTATCAAGGTCCCAACTaGCTTCTTGCACACACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PEETIKETYHSISAAVVYYQGPN*LLAHTS Trigger: AGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGATA...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATCTCCAGCTTGCAGGATaGTTTGTCCATAGGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PEETIKETYHSISAAVVYLQLAG*FVHREF Trigger: AAATTCCCTATGGACAAACAATCCTGCAAGCTGGAG...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAGTCCCAACTTGCTTCTaGCACACACCTCTGGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ETIKETYHSISAAVVYEKVPTCF*HTPLAN Trigger: ATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGAC...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAAAAGAGAACCCTTCATaGAAGGAGCACCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ETIKETYHSISAAVVYEKKENPS*KEHPGL Trigger: AAGCCCTGGGTGCTCCTTCAATGAAGGGTTCTCTTT...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | CCCGAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGCACAGTTTTTGCAGTaGAAGAGATCCAGAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: PEETIKETYHSISAAVVYAQFLQ*KRSRMT Trigger: AGTCATTCTGGATCTCTTCAACTGCAAAAACTGTGC...ATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTCGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | ATACAAATTGTAAGACTACAATGGCCAAACTCTGCAGAGACACCCCACAGTGCAAGCTTGCAGGATTGTTaGTCCATAGGGAATTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: IQIVRLQWPNSAETPHSASLQDC*SIGNFC Trigger: GCAAAAATTCCCTATGGACAAACAATCCTGCAAGCT...TGCACTGTGGGGTGTCTCTGCAGAGTTTGGCCATTGTAGTCTTACAATTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | AGAATTGTGCCTATGCATGGACAAGAGACAATACTGAGATCATCTATTCAGTACGTCGGACATCATATGTaGACAGCACCCTGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIVPMHGQETILRSSIQYVGHHM*TAPCPK Trigger: TTTTGGACAGGGTGCTGTCAACATATGATGTCCGAC...GTACTGAATAGATGATCTCAGTATTGTCTCTTGTCCATGCATAGGCACAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAGCTTGCAGGATTGTTaGTCCATAGGGAATTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EETIKETYHSISAAVVYESLQDC*SIGNFC Trigger: GCAAAAATTCCCTATGGACAAACAATCCTGCAAGCT...CTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS-3UTR CAA 90 bp | GAAACCATAAAGGAAACATATCATAGTATCTCCGCGGCTGTGGTGTATGAGAAAGATCGGCTGTGGATTTaGATGGGGATAATACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETIKETYHSISAAVVYEKDRLWI*MGIILS Trigger: TGACAGTATTATCCCCATCAAAATCCACAGCCGATC...TTTCTCATACACCACAGCCGCGGAGATACTATGATATGTTTCCTTTATGGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS TCA 90 bp | AGTAAGCTAAGCGTGTGTCCTTCCAGGTCTGATGCAAAAACATTGTaGTTGTATAGTCCATATTTATTTCTGAGATCTGTTCAATACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLSVCPSRSDAKTL*LYSPYLFLRSVQYW Trigger: CCAGTATTGAACAGATCTCAGAAATAAATATGGACTATACAATCACAATGTTTTTGCATCAGACCTGGAAGGACACACGCTTAGCTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS-3UTR CAA 90 bp | TATATACAGAGTAAGGAATCCTCATTAGGAATGGTCACAATCTCAGCAAAACTTGCACAGTTTTTGCAGTaGAAGAGATCCAGAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: YIQSKESSLGMVTISAKLAQFLQ*KRSRMT Trigger: AGTCATTCTGGATCTCTTCAACTGCAAAAACTGTGC...AAGTTTTGCTGAGATTGTGACCATTCCTAATGAGGATTCCTTACTCTGTATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114553.8 |
||
| CDS CCA 72 bp | GCGTGCTGGAGGAGAGCTCGAAGTGGAATTTCGGGGTaGGACTGGGGCCGTTACTCTCTGCCAGCCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACWRRARSGISG*DWGRYSLPAKS Trigger: GGACTTGGCTGGCAGAGAGTAACGGCCCCAGTCCCACCCCGAAATTCCACTTCGAGCTCTCCTCCAGCACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS TCA 72 bp | AACACCAAGGATCCTAGACTTTCCTGGCTTGCCAGATaGGCCTGCATGGGGCTGTCAGGAAGGGGACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: NTKDPRLSWLAR*ACMGLSGRGPA Trigger: AGCTGGTCCCCTTCCTGACAGCCCCATGCAGGCTCATCTGGCAAGCCAGGAAAGTCTAGGATCCTTGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CCA 72 bp | AGCTTGAGCCTTCCAGTGTGGCTGCTTCCATGGCCATaGCTCTCCTCAGAGCTTAGGCTTTCTTCGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLPVWLLPWP*LSSELRLSSES Trigger: AGACTCCGAAGAAAGCCTAAGCTCTGAGGAGAGCCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CCA 72 bp | ATCTGGAGCTTGAGCCTTCCAGTGTGGCTGCTTCCATaGCCATGGCTCTCCTCAGAGCTTAGGCTTTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: IWSLSLPVWLLP*PWLSSELRLSS Trigger: CGAAGAAAGCCTAAGCTCTGAGGAGAGCCATGGCCATGGAAGCAGCCACACTGGAAGGCTCAAGCTCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CCA 72 bp | TCCCAACTTGCTTCTTGCACACACCTCTGGCTAATCTaGAGCTTGAGCCTTCCAGTGTGGCTGCTTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLASCTHLWLI*SLSLPVWLLPW Trigger: CCATGGAAGCAGCCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS CAA 72 bp | TCATCAGTAAGGCTCCAGATACTGTCAGCATCCCCCTaGCATTGTTCATCAAGGCCAAGCCAGCTGCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVRLQILSASP*HCSSRPSQLLV Trigger: CACGAGCAGCTGGCTTGGCCTTGATGAACAATGCAAGGGGGATGCTGACAGTATCTGGAGCCTTACTGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
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| CDS CAA 90 bp | GCTCTCCACCTCCAGCTTGCAGGATTGTTTGTCCATAGGGAATTTTaGCAGATCCAGGGAACAGGCTGCTGTTGTGGTAAGTCGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALHLQLAGLFVHREF*QIQGTGCCCGKSDA Trigger: GGCATCCGACTTACCACAACAGCAGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGACAAACAATCCTGCAAGCTGGAGGTGGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CAA 90 bp | GTCTTCGACAGTGTAGCCATAGCTCTCCACCTCCAGCTTGCAGGATaGTTTGTCCATAGGGAATTTTTGCAGATCCAGGGAACAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFDSVAIALHLQLAG*FVHREFLQIQGTGC Trigger: GCAGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGACAAACAATCCTGCAAGCTGGAGGTGGAGAGCTATGGCTACACTGTCGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CAA 90 bp | ATGAGCTCCTCATCAGTAAGGCTCCAGATACTGTCAGCATCCCCCTaGCATTGTTCATCAAGGCCAAGCCAGCTGCTCGTGATACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: MSSSSVRLQILSASP*HCSSRPSQLLVILM Trigger: CATCAGTATCACGAGCAGCTGGCTTGGCCTTGATGAACAATGCAAGGGGGATGCTGACAGTATCTGGAGCCTTACTGATGAGGAGCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS GCA 72 bp | AGTAGACTGAGACTTTCTGAGGTAGCCAGCTGGGCCTaGTCTGATGTGAACACCAAGGATCCTAGACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLRLSEVASWA*SDVNTKDPRLS Trigger: GGAAAGTCTAGGATCCTTGGTGTTCACATCAGAGCAGGCCCAGCTGGCTACCTCAGAAAGTCTCAGTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 72 bp | TTATCAAGGTCCCAACTTGCTTCTTGCACACACCTCTaGCTAATCTGGAGCTTGAGCCTTCCAGTGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRSQLASCTHL*LIWSLSLPVWL Trigger: CAGCCACACTGGAAGGCTCAAGCTCCAGATTAGCCAGAGGTGTGTGCAAGAAGCAAGTTGGGACCTTGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS CAA 72 bp | AATCAGGCCATCCTGCACATTTGCTACCACCACTTCTaGGTAGCGGTATCGGGCAACAACTCTCCTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NQAILHICYHHF*VAVSGNNSPGF Trigger: AAACCCAGGAGAGTTGTTGCCCGATACCGCTACCAAGAAGTGGTGGTAGCAAATGTGCAGGATGGCCTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CAA 90 bp | TTCCACATTAATCAGGCCATCCTGCACATTTGCTACCACCACTTCTaGGTAGCGGTATCGGGCAACAACTCTCCTGGGTTTCCTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: FHINQAILHICYHHF*VAVSGNNSPGFPAS Trigger: AGATGCAGGAAACCCAGGAGAGTTGTTGCCCGATACCGCTACCAAGAAGTGGTGGTAGCAAATGTGCAGGATGGCCTGATTAATGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS TCA 72 bp | TCCTTGCTGGTAATTGTTCTCCCCAGGTACGTGTACTaGGGGATATGCAGCCCATCAGTAATGTGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLVIVLPRYVY*GICSPSVMWMA Trigger: TGCCATCCACATTACTGATGGGCTGCATATCCCTCAGTACACGTACCTGGGGAGAACAATTACCAGCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS TCA 72 bp | CTATCAACCTTGGGGACCCGGTTAGGTTTAAAGAGCTaGAAAGAGAACCCTTCATTGAAGGAGCACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTLGTRLGLKS*KENPSLKEHPG Trigger: CCCTGGGTGCTCCTTCAATGAAGGGTTCTCTTTTCAGCTCTTTAAACCTAACCGGGTCCCCAAGGTTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033711.6 |
||
| CDS GCA 72 bp | GTCCATAGGGAATTTTTGCAGATCCAGGGAACAGGCTaGTGTTGTGGTAAGTCGGATGCCATATCGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: VHREFLQIQGTG*CCGKSDAISHC Trigger: ACAGTGCGATATGGCATCCGACTTACCACAACAGCAGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CAA 90 bp | ATTAGTAAGAAAGCCATGAAAGTGAATGGTACACTCAGGCACTGTTaGCTCAGAGGTGGAGGGCAGATCACTCAGGCTTTCTCCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISKKAMKVNGTLRHC*LRGGGQITQAFSSG Trigger: GCCACTGGAGAAAGCCTGAGTGATCTGCCCTCCACCTCTGAGCAAACAGTGCCTGAGTGTACCATTCACTTTCATGGCTTTCTTACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS TCA 72 bp | AGTTCATCCAAAATGATATCCAGGAGAGAATGGTGGTaGGGACCGTGGGCCAATAGACCTGCACAAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSKMISRREWW*GPWANRPAQGN Trigger: GTTACCTTGTGCAGGTCTATTGGCCCACGGTCCTCACCACCATTCTCTCCTGGATATCATTTTGGATGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CAA 72 bp | CTCCAGCTTGCAGGATTGTTTGTCCATAGGGAATTTTaGCAGATCCAGGGAACAGGCTGCTGTTGTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQLAGLFVHREF*QIQGTGCCCGK Trigger: CTTACCACAACAGCAGCCTGTTCCCTGGATCTGCAAAAATTCCCTATGGACAAACAATCCTGCAAGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CAA 72 bp | AGTGTAGCCATAGCTCTCCACCTCCAGCTTGCAGGATaGTTTGTCCATAGGGAATTTTTGCAGATCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVAIALHLQLAG*FVHREFLQIQG Trigger: TCCCTGGATCTGCAAAAATTCCCTATGGACAAACAATCCTGCAAGCTGGAGGTGGAGAGCTATGGCTACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 72 bp | TCTCATGCATCCGATAATCCAGGGTCAGGTTTAGGTTaGTTTCATAGTAAGCTAAGCGTGTGTCCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHASDNPGSGLG*FHSKLSVCPSR Trigger: CCTGGAAGGACACACGCTTAGCTTACTATGAAACCAACCTAAACCTGACCCTGGATTATCGGATGCATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CCA 72 bp | TGTGGTAAGTCGGATGCCATATCGCACTGTCCCATCTaGGTGAAGTTGAAATACACGATTCTCCACAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: CGKSDAISHCPI*VKLKYTILHSY Trigger: GTAACTGTGGAGAATCGTGTATTTCAACTTCACCCAGATGGGACAGTGCGATATGGCATCCGACTTACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
||
| CDS CAA 72 bp | GGGTTTCCTGCATCTTCTGTGATTACGCCGAGGTACTaGGCTGAAGAAAAGGTAGTTGATGTAGACATACTC | + |
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Preference number: 6 (lower is better) Translates to: GFPASSVITPRY*AEEKVVDVDIL Trigger: GAGTATGTCTACATCAACTACCTTTTCTTCAGCCAAGTACCTCGGCGTAATCACAGAAGATGCAGGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS CAA 72 bp | TCTTCATCATCACAGGCATCAGATCGGCTGTGGATTTaGATGGGGATAATACTGTCATTAGTAAGAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSQASDRLWI*MGIILSLVRKP Trigger: TGGCTTTCTTACTAATGACAGTATTATCCCCATCAAAATCCACAGCCGATCTGATGCCTGTGATGATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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| CDS TCA 72 bp | AGCGTGTGTCCTTCCAGGTCTGATGCAAAAACATTGTaGTTGTATAGTCCATATTTATTTCTGAGATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SVCPSRSDAKTL*LYSPYLFLRSV Trigger: AACAGATCTCAGAAATAAATATGGACTATACAATCACAATGTTTTTGCATCAGACCTGGAAGGACACACGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033711.6 ENSMUST00000114553.8 |
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