Pregenerated sensors for GABRP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020159Ensembl transcript IDs: ENSMUST00000020366.8, ENSMUST00000135350.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAACCCATCTGGTATTAGGTTGATGAGGCAAGGTAACCACCAATaGATTGACGCAAACCCACATTTCATATTTCAAGGAAAAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: KNPSGIRLMRQGNHQ*IDANPHFIFQGKTK Trigger: TTTTGTTTTTCCTTGAAATATGAAATGTGGGTTTGCGTCAATTCATTGGTGGTTACCTTGCCTCATCAACCTAATACCAGATGGGTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGGCAGAGAGGACAGGTTaGCAGAGCACTCTCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRAERTG*QSTLWS Trigger: AGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGC...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGGGGCCAGTGGTCTGCTaGTCAGGCAGGGTAATCCAC | + |
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Preference number: 2 (lower is better) Translates to: IETSVKRQALKLTETERWGPVVC*SGRVIH Trigger: GTGGATTACCCTGCCTGAGCAGCAGACCACTGGCCC...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR CAA 90 bp | GACCAGGGATCCAGAGAGCAAATAGCCCTGAGTAGGTTCGCAGTCTaGGGTTCTGTGTATGTGTGTGGAGGGGGTGTTCTGTCCAAAATT | + |
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Preference number: 2 (lower is better) Translates to: DQGSREQIALSRFAV*GSVYVCGGGVLSKI Trigger: AATTTTGGACAGAACACCCCCTCCACACACATACACAGAACCCAAGACTGCGAACCTACTCAGGGCTATTTGCTCTCTGGATCCCTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGCAGGGTGACCCTGGCTaGACTCAGAAAAGACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IETSVKRQALKLTETERWQGDPG*TQKRQL Trigger: GAGCTGTCTTTTCTGAGTTCAGCCAGGGTCACCCTG...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTCTTAACCTCATTATGTaGTGCAAGAGTTCAATGGCG | + |
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Preference number: 2 (lower is better) Translates to: WSTGQQRGQVDRALSGLLLNLIM*CKSSMA Trigger: CGCCATTGAACTCTTGCATCACATAATGAGGTTAAG...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTTTTTTATGGAGTGAATaGAGACCAGGGATCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WSTGQQRGQVDRALSGLLFLWSE*RPGIQR Trigger: TCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAA...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGAGCTCACGTGGGTTGTaGAATGTGTCTTTCCATCGT | + |
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Preference number: 2 (lower is better) Translates to: IETSVKRQALKLTETERWSSRGL*NVSFHR Trigger: ACGATGGAAAGACACATTGCACAACCCACGTGAGCT...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGTTCTGTGTATGTGTGTaGAGGGGGTGTTCTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: IETSVKRQALKLTETERWFCVCV*RGCSVQ Trigger: TTGGACAGAACACCCCCTCCACACACATACACAGAA...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGGTAGGTTCGCAGTCTTaGGTTCTGTGTATGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: IETSVKRQALKLTETERWVGSQS*VLCMCV Trigger: CACACACATACACAGAACCCAAGACTGCGAACCTAC...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTTGTTCTGTCCAAAATTaGAGAAGAAAAGGGTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: WSTGQQRGQVDRALSGLLCSVQN*RRKGLP Trigger: AGGCAACCCTTTTCTTCTTCAATTTTGGACAGAACA...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR CAA 90 bp | AAAGACCTGAAGACAGCAAGAGTCTTTGAAACAATTGAGGCTGCATaGGAACCTTATATAGGCGATTCCCGTGGAGCAAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KDLKTARVFETIEAA*EPYIGDSRGARERE Trigger: CTCTCTCTCTCTTGCTCCACGGGAATCGCCTATATAAGGTTCCAATGCAGCCTCAATTGTTTCAAAGACTCTTGCTGTCTTCAGGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR TCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACAATAAAAGCTCCTCTTTaGAGGAGGCAGGGCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RNYTYCTPMNKANPKIETIKAPL*RRQGLC Trigger: GCAAAGGCCCTGCCTCCTTCAAAGAGGAGCTTTTAT...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR GCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACAAATAGACATCACTCCTaGCTAGTCACTGGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: RNYTYCTPMNKANPKIETNRHHS*LVTGAQ Trigger: CTGTGCTCCAGTGACTAGGCAGGAGTGATGTCTATT...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACAGGATGTATTAGAATTTaGGGACAATTCTTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RNYTYCTPMNKANPKIETGCIRI*GQFFCG Trigger: ACCACAGAAGAATTGTCCCCAAATTCTAATACATCC...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR TCA 72 bp | AGAGAGAGAGGGCACACAAGAGCTCCTAGGTCAGGGTaGCCCTGGCTGAACTCAGAAAAGACAGCTCACGTG | + |
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Preference number: 3 (lower is better) Translates to: RERGHTRAPRSG*PWLNSEKTAHV Trigger: CACGTGAGCTGTCTTTTCTGAGTTCAGCCAGGGTCACCCTGACCTAGGAGCTCTTGTGTGCCCTCTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGAAGGAGGCAGGGCCTTaGCCACCGGCAAAATGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRKEAGP*PPAKCS Trigger: GGAACATTTTGCCGGTGGCAAAGGCCCTGCCTCCTT...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR CCA 72 bp | GATGGGCAGAGCCATGCTGATGAAAAGGAGGGCCCGTaGGTGAAGGACGTGAAAGGAAAGAACATCTACAGC | + |
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Preference number: 3 (lower is better) Translates to: DGQSHADEKEGP*VKDVKGKNIYS Trigger: GCTGTAGATGTTCTTTCCTTTCACGTCCTTCACCCACGGGCCCTCCTTTTCATCAGCATGGCTCTGCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGAGCAGAGAGGACAGGTaGACAGAGCACTCTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRSREDR*TEHSLV Trigger: GACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCT...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR TCA 72 bp | AGCATCTTGGTCAACAGGTCAGCAGAGAGGACAGGTTaGCAGAGCACTCTCTGGTCTACTTGGTTCCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: SILVNRSAERTG*QSTLWSTWFLA Trigger: GGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCAAGATGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR TCA 72 bp | CCTAGTCACTGGAGCACAGGGATAAAAGCTCCTCTTTaGAGGAGGCAGGGCCTTTGCCACCGGCAAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: PSHWSTGIKAPL*RRQGLCHRQNV Trigger: AACATTTTGCCGGTGGCAAAGGCCCTGCCTCCTTCAAAGAGGAGCTTTTATCCCTGTGCTCCAGTGACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR GCA 72 bp | CTGGCTGAACTCAGAAAAGACAGCTCACGTGGGTTGTaGAATGTGTCTTTCCATCGTTCAGAACAGTCGGAA | + |
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Preference number: 3 (lower is better) Translates to: LAELRKDSSRGL*NVSFHRSEQSE Trigger: TTCCGACTGTTCTGAACGATGGAAAGACACATTGCACAACCCACGTGAGCTGTCTTTTCTGAGTTCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAAAGTAGGTTCGCAGTCTaGGGTTCTGTGTATGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKSRFAV*GSVYVC Trigger: ACACACATACACAGAACCCAAGACTGCGAACCTACT...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAACCATCTGGTATTAGGTaGATGAGGCAAGGTAACCAC | + |
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Preference number: 3 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKPSGIR*MRQGNH Trigger: GTGGTTACCTTGCCTCATCAACCTAATACCAGATGG...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR GCA 72 bp | ATATGTAATCATCTTCCCACATTTTTATGGAGTGAATaGAGACCAGGGATCCAGAGAGCAAATAGCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: ICNHLPTFLWSE*RPGIQRANSPE Trigger: CTCAGGGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAAGATGATTACATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR-3UTR CAA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACACACTCTCTGGTCTACTaGGTTCCTAGCCAGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: RNYTYCTPMNKANPKIETHSLVY*VPSQYV Trigger: CACATACTGGCTAGGAACCAAGTAGACCAGAGAGTG...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTGTGCGTACAGGACTGTaGCGTTGGAGAAGAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: WSTGQQRGQVDRALSGLLVRTGL*RWRRGG Trigger: TCCGCCTCTTCTCCAACGGCACAGTCCTGTACGCAC...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTTGGATGCACGTCCTCTaGGTGAGGAGACTCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: WSTGQQRGQVDRALSGLLWMHVL*VRRLRH Trigger: GTGTCTGAGTCTCCTCACTCAGAGGACGTGCATCCA...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGGTCCATGTTACTCTCTaGGATGCTAGAGATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRVHVTL*DARDAG Trigger: GCCAGCATCTCTAGCATCTCAGAGAGTAACATGGAC...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGCTGGCCCCCTATCTTTaGCTGCCATCTGCTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: IETSVKRQALKLTETERWLAPYL*LPSAVR Trigger: CCTTACAGCAGATGGCAGTCAAAGATAGGGGGCCAG...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAATGTTGGGTAGGGATGTaGGGGAGCCGATCATCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKCWVGM*GSRSSA Trigger: CGCTGATGATCGGCTCCCGCACATCCCTACCCAACA...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAAGGGTCTGTCCAACGCTaGCGGAGGTATATAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKGSVQR*RRYIVA Trigger: AGCCACTATATACCTCCGGCAGCGTTGGACAGACCC...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR CAA 72 bp | ACCCTGGCTGAACTCAGAAAAGACAGCTCACGTGGGTaGTGCAATGTGTCTTTCCATCGTTCAGAACAGTCG | + |
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Preference number: 4 (lower is better) Translates to: TLAELRKDSSRG*CNVSFHRSEQS Trigger: CGACTGTTCTGAACGATGGAAAGACACATTGCACAACCCACGTGAGCTGTCTTTTCTGAGTTCAGCCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | TTCCCACATTTTTATGGAGTGAATGCAGACCAGGGATCCAGAGAGCAAATAGCCCCCCAACTTTCTAGCTaGAGCTTGCAGGTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FPHFYGVNADQGSREQIAPQLSS*SLQVCV Trigger: CACACAGACCTGCAAGCTGCAGCTAGAAAGTTGGGG...GGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGCCCACTGTGACTTCATaGAGGAAGGACTTCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: IETSVKRQALKLTETERWPTVTS*RKDFLD Trigger: GTCCAAGAAGTCCTTCCTCCATGAAGTCACAGTGGG...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTAGAACTCCACATCATTaGCATCGTATCCCCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: WSTGQQRGQVDRALSGLLRTPHH*HRIPNF Trigger: AAAGTTGGGGATACGATGGCAATGATGTGGAGTTCT...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CCA 90 bp | TTCCCACATTTTTATGGAGTGAATGCAGACCAGGGATCCAGAGAGCAAATAGCCACACCACCAGGAAGGTaGAAGGGACATAGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FPHFYGVNADQGSREQIATPPGR*KGHRFP Trigger: TGGAAACCTATGTCCCTTCCACCTTCCTGGTGGTGT...GGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGTGTTATATCCTGCAGTaGGGTTCTCAAAGCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: IETSVKRQALKLTETERWCYILQ*GSQSQV Trigger: TACCTGGCTTTGAGAACCTCACTGCAGGATATAACA...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGCACCGAAATTGGGCCTaGGGAATTTGTTATATCCTG | + |
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Preference number: 4 (lower is better) Translates to: IETSVKRQALKLTETERWHRNWA*GICYIL Trigger: CAGGATATAACAAATTCCTCAGGCCCAATTTCGGTG...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAACATCGATGGCCTTTATaGAGCAGTTGGTGTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKHRWPL*SSWCWV Trigger: TACCCAACACCAACTGCTTCATAAAGGCCATCGATG...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR GCA 90 bp | TTCCCACATTTTTATGGAGTGAATGCAGACCAGGGATCCAGAGAGCAAATAGCCTGTTGTGATTCTAAGTaGGTACAGGACTGTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: FPHFYGVNADQGSREQIACCDSK*VQDCAV Trigger: AACGGCACAGTCCTGTACGCACTTAGAATCACAACA...GGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CCA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAAGGAGGAAGGACTTCTTaGACTCTACAATGTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKGGRTS*TLQCKC Trigger: ACACTTACATTGTAGAGTCCAAGAAGTCCTTCCTCC...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| 3UTR CAA 72 bp | AAGACAGCAAGAGTCTTTGAAACAATTGAGGCTGCATaGGAACCTTATATAGGCGATTCCCGTGGAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KTARVFETIEAA*EPYIGDSRGAR Trigger: TCTTGCTCCACGGGAATCGCCTATATAAGGTTCCAATGCAGCCTCAATTGTTTCAAAGACTCTTGCTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACAGCCTGTTTCCCACTGTaGCTTCATGGAGGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: RNYTYCTPMNKANPKIETACFPL*LHGGRT Trigger: AGTCCTTCCTCCATGAAGTCACAGTGGGAAACAGGC...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR TCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACAGGTTCTCGCAGGAACTaGATCGAGGGAGATCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: RNYTYCTPMNKANPKIETGSRRN*IEGDPK Trigger: TTTTGGATCTCCCTCGATTCAGTTCCTGCGAGAACC...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CCA 90 bp | CGCAACTACACCTATTGTACTCCAATGAACAAAGCGAATCCTAAAATAGAAACATACAATGTAAGTGTCTaGCACCCAGAGGAACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RNYTYCTPMNKANPKIETYNVSV*HPEELH Trigger: GTGGAGTTCCTCTGGGTGCCAGACACTTACATTGTA...TGTTTCTATTTTAGGATTCGCTTTGTTCATTGGAGTACAATAGGTGTAGTTGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CCA 90 bp | TGGTGTTGGGTAGGGATGTGCGGGAGCCGATCATCAGCGTTGTCATaGATAACACCGTTGTCACTCCAATGCAGGTTCTCGCAGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: WCWVGMCGSRSSALS*ITPLSLQCRFSQEL Trigger: CAGTTCCTGCGAGAACCTGCATTGGAGTGACAACGGTGTTATCCATGACAACGCTGATGATCGGCTCCCGCACATCCCTACCCAACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTTACAGGACTGTGCCGTaGGAGAAGAGGCGGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: WSTGQQRGQVDRALSGLLYRTVP*EKRRMS Trigger: GCTCATCCGCCTCTTCTCCAACGGCACAGTCCTGTA...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGGCTGGCCCCCTATCTTaGACTGCCATCTGCTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRAGPLS*TAICCK Trigger: CTTACAGCAGATGGCAGTCAAAGATAGGGGGCCAGC...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS TCA 90 bp | TGCTGGGATACGGTGACCAGGGTGAAATACTGTTGGATTGTGTACTaGGCAAGGCGCAGGTTTTCAAGTCCACGCACCGAGTCATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: CWDTVTRVKYCWIVY*ARRRFSSPRTESFP Trigger: AGGGAATGACTCGGTGCGTGGACTTGAAAACCTGCGCCTTGCTCAGTACACAATCCAACAGTATTTCACCCTGGTCACCGTATCCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTCCAGGTAAGGAAAGCTaGTCACTTCTGCTGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: WSTGQQRGQVDRALSGLLPGKES*SLLLTS Trigger: GGAGGTCAGCAGAAGTGACAAGCTTTCCTTACCTGG...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACATTTTTATGGAGTGAATGCAGACCAGGGATCCAGAGAGCAAATAGCCCTGCTGACCTCCACATaGACCTGGTTCCCCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: FPHFYGVNADQGSREQIALLTST*TWFPWM Trigger: CATCCAGGGGAACCAGGTCAATGTGGAGGTCAGCAG...GGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGGCCTTTATGAAGCAGTaGGTGTTGGGTAGGGATGTG | + |
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Preference number: 5 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRAFMKQ*VLGRDV Trigger: CACATCCCTACCCAACACCAACTGCTTCATAAAGGC...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGTTGGGCCTGAGGAATTaGTTATATCCTGCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRLGLRN*LYPAVR Trigger: CCTCACTGCAGGATATAACAAATTCCTCAGGCCCAA...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGCTTTCTAGCTGCAGCTaGCAGGTCTGTGTGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: IETSVKRQALKLTETERWLSSCS*QVCVSM Trigger: CATGGACACACAGACCTGCAAGCTGCAGCTAGAAAG...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | TGGTCAACAGGTCAGCAGAGAGGACAGGTTGACAGAGCACTCTCTGGTCTACTTGAGAACTCCACATCATaGCCATCGTATCCCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: WSTGQQRGQVDRALSGLLENSTS*PSYPQL Trigger: AAGTTGGGGATACGATGGCAATGATGTGGAGTTCTC...AAGTAGACCAGAGAGTGCTCTGTCAACCTGTCCTCTCTGCTGACCTGTTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAACATCTGTTAAGCGCCAGGCACTCAAGCTCACAGAAACGGAACGATGGAGCCGATCATCAGCGTaGTCATGGATAACACCGTTG | + |
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Preference number: 5 (lower is better) Translates to: IETSVKRQALKLTETERWSRSSA*SWITPL Trigger: CAACGGTGTTATCCATGACAACGCTGATGATCGGCT...CCATCGTTCCGTTTCTGTGAGCTTGAGTGCCTGGCGCTTAACAGATGTTTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | ACTCAAGCTCACAGAAACGGAACGATGGGCAGAGCCATGCTGATGAAAAGGAGGCCTCCGAAGCTCAAATaGCAAAACCAATCTCGTATA | + |
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Preference number: 5 (lower is better) Translates to: TQAHRNGTMGRAMLMKRRPPKLK*QNQSRI Trigger: TATACGAGATTGGTTTTGCAATTTGAGCTTCGGAGG...CCTCCTTTTCATCAGCATGGCTCTGCCCATCGTTCCGTTTCTGTGAGCTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACATTTTTATGGAGTGAATGCAGACCAGGGATCCAGAGAGCAAATAGCCGAGCTGTTGATGATGTaGGTGATATTGACTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FPHFYGVNADQGSREQIAELLMM*VILTSS Trigger: GGAAGAAGTCAATATCACCAACATCATCAACAGCTC...GGCTATTTGCTCTCTGGATCCCTGGTCTGCATTCACTCCATAAAAATGTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGACAGAGCACTCTCTGGTCTACTTGGTTCCTAGCCAGTATGTGAGTAAAAAGACAAACTTAAACTaGTCGCTGGCTTTCATTGTC | + |
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Preference number: 5 (lower is better) Translates to: RLTEHSLVYLVPSQYVSKKTNLN*SLAFIV Trigger: GACAATGAAAGCCAGCGACAAGTTTAAGTTTGTCTT...TTTACTCACATACTGGCTAGGAACCAAGTAGACCAGAGAGTGCTCTGTCAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | ACCCAGAGGAACTCCACAAGGCGGGCATCTAGAGTAAAGCTCTTGTaGCCTTCGAACACTAGCCGTGGGTCTGTCCAACGCTGCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TQRNSTRRASRVKLL*PSNTSRGSVQRCRR Trigger: CCTCCGGCAGCGTTGGACAGACCCACGGCTAGTGTTCGAAGGCAACAAGAGCTTTACTCTAGATGCCCGCCTTGTGGAGTTCCTCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | AGCAGTTGGTGTTGGGTAGGGATGTGCGGGAGCCGATCATCAGCGTaGTCATGGATAACACCGTTGTCACTCCAATGCAGGTTCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSWCWVGMCGSRSSA*SWITPLSLQCRFSQ Trigger: CTGCGAGAACCTGCATTGGAGTGACAACGGTGTTATCCATGACAACGCTGATGATCGGCTCCCGCACATCCCTACCCAACACCAACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CCA 72 bp | GTAGGGATGTGCGGGAGCCGATCATCAGCGTTGTCATaGATAACACCGTTGTCACTCCAATGCAGGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: VGMCGSRSSALS*ITPLSLQCRFS Trigger: CGAGAACCTGCATTGGAGTGACAACGGTGTTATCCATGACAACGCTGATGATCGGCTCCCGCACATCCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | AACTCCACAAGGCGGGCATCTAGAGTAAAGCTCTTGTaGCCTTCGAACACTAGCCGTGGGTCTGTCCAACGC | + |
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Preference number: 6 (lower is better) Translates to: NSTRRASRVKLL*PSNTSRGSVQR Trigger: GCGTTGGACAGACCCACGGCTAGTGTTCGAAGGCAACAAGAGCTTTACTCTAGATGCCCGCCTTGTGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | TGTTGGGTAGGGATGTGCGGGAGCCGATCATCAGCGTaGTCATGGATAACACCGTTGTCACTCCAATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CWVGMCGSRSSA*SWITPLSLQCR Trigger: CCTGCATTGGAGTGACAACGGTGTTATCCATGACAACGCTGATGATCGGCTCCCGCACATCCCTACCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | CTGAAGCAGATGCCTAGGTACACATCGATGGCCTTTATGAAGCAGTaGGTGTTGGGTAGGGATGTGCGGGAGCCGATCATCAGCGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LKQMPRYTSMAFMKQ*VLGRDVREPIISVV Trigger: GACAACGCTGATGATCGGCTCCCGCACATCCCTACCCAACACCAACTGCTTCATAAAGGCCATCGATGTGTACCTAGGCATCTGCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS TCA 72 bp | ACGGTGACCAGGGTGAAATACTGTTGGATTGTGTACTaGGCAAGGCGCAGGTTTTCAAGTCCACGCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: TVTRVKYCWIVY*ARRRFSSPRTE Trigger: CTCGGTGCGTGGACTTGAAAACCTGCGCCTTGCTCAGTACACAATCCAACAGTATTTCACCCTGGTCACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | GTTGTTGTGATTCTAAGTGCGTACAGGACTGTGCCGTaGGAGAAGAGGCGGATGAGCCTGTTTCCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: VVVILSAYRTVP*EKRRMSLFPTV Trigger: CACAGTGGGAAACAGGCTCATCCGCCTCTTCTCCAACGGCACAGTCCTGTACGCACTTAGAATCACAACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | ATGCCTAGGTACACATCGATGGCCTTTATGAAGCAGTaGGTGTTGGGTAGGGATGTGCGGGAGCCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: MPRYTSMAFMKQ*VLGRDVREPII Trigger: GATGATCGGCTCCCGCACATCCCTACCCAACACCAACTGCTTCATAAAGGCCATCGATGTGTACCTAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS GCA 72 bp | TCAGCGTTGTCATGGATAACACCGTTGTCACTCCAATaGAGGTTCTCGCAGGAACTGAATCGAGGGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SALSWITPLSLQ*RFSQELNRGRS Trigger: GGATCTCCCTCGATTCAGTTCCTGCGAGAACCTGCATTGGAGTGACAACGGTGTTATCCATGACAACGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | CCTGCAGTGAGGTTCTCAAAGCCAGGTAAGGAAAGCTaGTCACTTCTGCTGACCTCCACATTGACCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PAVRFSKPGKES*SLLLTSTLTWF Trigger: GAACCAGGTCAATGTGGAGGTCAGCAGAAGTGACAAGCTTTCCTTACCTGGCTTTGAGAACCTCACTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020366.8 ENSMUST00000135350.2 |
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| CDS CAA 72 bp | CTCCTGCTGGGATACGGTGACCAGGGTGAAATACTGTaGGATTGTGTACTGAGCAAGGCGCAGGTTTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LLLGYGDQGEIL*DCVLSKAQVFK Trigger: CTTGAAAACCTGCGCCTTGCTCAGTACACAATCCAACAGTATTTCACCCTGGTCACCGTATCCCAGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | GCGATGTCCAGAGTCAGTGCTATCCGAACTGGGTCACCACCGAAATaGGGCCTGAGGAATTTGTTATATCCTGCAGTGAGGTTCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AMSRVSAIRTGSPPK*GLRNLLYPAVRFSK Trigger: CTTTGAGAACCTCACTGCAGGATATAACAAATTCCTCAGGCCCAATTTCGGTGGTGACCCAGTTCGGATAGCACTGACTCTGGACATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | CATGTAACTGTTGTTGTGATTCTAAGTGCGTACAGGACTGTGCCGTaGGAGAAGAGGCGGATGAGCCTGTTTCCCACTGTGACTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: HVTVVVILSAYRTVP*EKRRMSLFPTVTSW Trigger: CCATGAAGTCACAGTGGGAAACAGGCTCATCCGCCTCTTCTCCAACGGCACAGTCCTGTACGCACTTAGAATCACAACAACAGTTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | CGAACTGGGTCACCACCGAAATTGGGCCTGAGGAATTaGTTATATCCTGCAGTGAGGTTCTCAAAGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RTGSPPKLGLRN*LYPAVRFSKPG Trigger: ACCTGGCTTTGAGAACCTCACTGCAGGATATAACAAATTCCTCAGGCCCAATTTCGGTGGTGACCCAGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | AGAGTCAGTGCTATCCGAACTGGGTCACCACCGAAATaGGGCCTGAGGAATTTGTTATATCCTGCAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVSAIRTGSPPK*GLRNLLYPAVR Trigger: CCTCACTGCAGGATATAACAAATTCCTCAGGCCCAATTTCGGTGGTGACCCAGTTCGGATAGCACTGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | AAGCTGGAGATGGAGCTGTTGATGATGTTGGTGATATaGACTTCTTCCGAGTCCTTCGCTGGCCCCCTATCT | + |
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Preference number: 6 (lower is better) Translates to: KLEMELLMMLVI*TSSESFAGPLS Trigger: AGATAGGGGGCCAGCGAAGGACTCGGAAGAAGTCAATATCACCAACATCATCAACAGCTCCATCTCCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | TTGTTATATCCTGCAGTGAGGTTCTCAAAGCCAGGTAAGGAAAGCTaGTCACTTCTGCTGACCTCCACATTGACCTGGTTCCCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LLYPAVRFSKPGKES*SLLLTSTLTWFPWM Trigger: CATCCAGGGGAACCAGGTCAATGTGGAGGTCAGCAGAAGTGACAAGCTTTCCTTACCTGGCTTTGAGAACCTCACTGCAGGATATAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020366.8 ENSMUST00000135350.2 |
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| CDS CAA 90 bp | AGTGCTATCCGAACTGGGTCACCACCGAAATTGGGCCTGAGGAATTaGTTATATCCTGCAGTGAGGTTCTCAAAGCCAGGTAAGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAIRTGSPPKLGLRN*LYPAVRFSKPGKES Trigger: GCTTTCCTTACCTGGCTTTGAGAACCTCACTGCAGGATATAACAAATTCCTCAGGCCCAATTTCGGTGGTGACCCAGTTCGGATAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | TTCCGTTTAAAGCTGGAGATGGAGCTGTTGATGATGTTGGTGATATaGACTTCTTCCGAGTCCTTCGCTGGCCCCCTATCTTTGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FRLKLEMELLMMLVI*TSSESFAGPLSLTA Trigger: GGCAGTCAAAGATAGGGGGCCAGCGAAGGACTCGGAAGAAGTCAATATCACCAACATCATCAACAGCTCCATCTCCAGCTTTAAACGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS GCA 72 bp | TCCACATCATTGCCATCGTATCCCCAACTTTCTAGCTaGAGCTTGCAGGTCTGTGTGTCCATGGGGTATTTA | + |
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Preference number: 6 (lower is better) Translates to: STSLPSYPQLSS*SLQVCVSMGYL Trigger: TAAATACCCCATGGACACACAGACCTGCAAGCTGCAGCTAGAAAGTTGGGGATACGATGGCAATGATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | AAGCTAATCTTCCGTTTAAAGCTGGAGATGGAGCTGTTGATGATGTaGGTGATATTGACTTCTTCCGAGTCCTTCGCTGGCCCCCTATCT | + |
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Preference number: 6 (lower is better) Translates to: KLIFRLKLEMELLMM*VILTSSESFAGPLS Trigger: AGATAGGGGGCCAGCGAAGGACTCGGAAGAAGTCAATATCACCAACATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATTAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | ATGCTGGCAAAGCTAATCTTCCGTTTAAAGCTGGAGATGGAGCTGTaGATGATGTTGGTGATATTGACTTCTTCCGAGTCCTTCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: MLAKLIFRLKLEMEL*MMLVILTSSESFAG Trigger: GCCAGCGAAGGACTCGGAAGAAGTCAATATCACCAACATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATTAGCTTTGCCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | TTCCGTTTAAAGCTGGAGATGGAGCTGTTGATGATGTaGGTGATATTGACTTCTTCCGAGTCCTTCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FRLKLEMELLMM*VILTSSESFAG Trigger: GCCAGCGAAGGACTCGGAAGAAGTCAATATCACCAACATCATCAACAGCTCCATCTCCAGCTTTAAACGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 90 bp | ATAGGTTTCCAGAATGAAATACAGGACGTTCCTCCGAAGCTCAAATaGCAAAACCAATCTCGTATAGTTTCCTGTCTCCTGCTGGGATAC | + |
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Preference number: 6 (lower is better) Translates to: IGFQNEIQDVPPKLK*QNQSRIVSCLLLGY Trigger: GTATCCCAGCAGGAGACAGGAAACTATACGAGATTGGTTTTGCAATTTGAGCTTCGGAGGAACGTCCTGTATTTCATTCTGGAAACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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| CDS CAA 72 bp | CAGAATGAAATACAGGACGTTCCTCCGAAGCTCAAATaGCAAAACCAATCTCGTATAGTTTCCTGTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QNEIQDVPPKLK*QNQSRIVSCLL Trigger: CAGGAGACAGGAAACTATACGAGATTGGTTTTGCAATTTGAGCTTCGGAGGAACGTCCTGTATTTCATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020366.8 |
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