Pregenerated sensors for GABRG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055026Ensembl transcript IDs: ENSMUST00000068394.7, ENSMUST00000068911.13
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTaGCTTCTGGCTGGGTTTGGCCCTGAGGGCTCGGCGGGGTCGCGA | + |
Preference number: 1 (lower is better) Translates to: NPNTNTEGGPATRLR*LLAGFGPEGSAGSR Trigger: TCGCGACCCCGCCGAGCCCTCAGGGCCAAACCCAGCCAGAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 90 bp | CCAGCCTCTGACCATGATCCCAGTTCTCTAAGGGGCCAGCCAGCTTaGACAGGACAGGTCACCCTCCTCCCAGCCAATGCCCTCTACAGT | + |
Preference number: 1 (lower is better) Translates to: PASDHDPSSLRGQPA*TGQVTLLPANALYS Trigger: ACTGTAGAGGGCATTGGCTGGGAGGAGGGTGACCTGTCCTGTCCAAGCTGGCTGGCCCCTTAGAGAACTGGGATCATGGTCAGAGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 90 bp | GTGTTTGCAATTGTGTGTGTGGCTTGCTCTCTGTCTTCAGTGTTGTaGGCACCTTCAGAGTGGGCCTGCCAAAGGCTGGAGCTTCAGAGA | + |
Preference number: 1 (lower is better) Translates to: VFAIVCVACSLSSVL*APSEWACQRLELQR Trigger: TCTCTGAAGCTCCAGCCTTTGGCAGGCCCACTCTGAAGGTGCCCACAACACTGAAGACAGAGAGCAAGCCACACACACAATTGCAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR GCA 90 bp | GACCCTGCTAATGAGTGGAAATGTGTGGTTGTCACCAATAGAGGATaGTTCAAAAGAGTCATGGAGTGCACAAGACTTGGAGTGCACAAG | + |
Preference number: 1 (lower is better) Translates to: DPANEWKCVVVTNRG*FKRVMECTRLGVHK Trigger: CTTGTGCACTCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCCACTCATTAGCAGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR GCA 90 bp | GAAAGTAACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATaGTGGGAAACTCTGGAACCAGGGCAGATGGACTTCCAAGGAATG | + |
Preference number: 1 (lower is better) Translates to: ESNQEINTGWHAFLK*WETLEPGQMDFQGM Trigger: CATTCCTTGGAAGTCCATCTGCCCTGGTTCCAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTTACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 90 bp | GTGTACGGGCACTGGTCCCAAGCGATGCAAAAGGAAGATACACAATaGGGAGGATCTGAGACAATGTCTAGATATTGGTTTGCATCTTTC | + |
Preference number: 1 (lower is better) Translates to: VYGHWSQAMQKEDTQ*GGSETMSRYWFASF Trigger: GAAAGATGCAAACCAATATCTAGACATTGTCTCAGATCCTCCCCATTGTGTATCTTCCTTTTGCATCGCTTGGGACCAGTGCCCGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 90 bp | GGAAATGTGTGGTTGTCACCAATAGAGGATGCTTCAAAAGAGTCATaGAGTGCACAAGACTTGGAGTGCACAAGAGCATCTGGTCATAGC | + |
Preference number: 1 (lower is better) Translates to: GNVWLSPIEDASKES*SAQDLECTRASGHS Trigger: GCTATGACCAGATGCTCTTGTGCACTCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | ATGCCTGCCCACGCTAGGTACAGAGACAAAAGTGGTTGGCATTCTTaGTGGTGGTTGAAATCACAGATACAGAATACATGGATCCAGAAG | + |
Preference number: 1 (lower is better) Translates to: MPAHARYRDKSGWHS*WWLKSQIQNTWIQK Trigger: CTTCTGGATCCATGTATTCTGTATCTGTGATTTCAACCACCATCAAGAATGCCAACCACTTTTGTCTCTGTACCTAGCGTGGGCAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | CCAGGATCCCTCAGGAAAACAGAACTCTCAGATGCACAGATCCTTTaGATAAAGTGGGGCATTATGTGCATAGACACTATGCACATTCTT | + |
Preference number: 1 (lower is better) Translates to: PGSLRKTELSDAQIL*IKWGIMCIDTMHIL Trigger: AAGAATGTGCATAGTGTCTATGCACATAATGCCCCACTTTATTCAAAGGATCTGTGCATCTGAGAGTTCTGTTTTCCTGAGGGATCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR GCA 90 bp | GAGGACCCTAAAAATTCTTGTAATGTATCAAAGTATATTGGCAAATaGCTGAACATCAGTCCTTCAGGGAGCAGAGGAAGGAGGATAGGG | + |
Preference number: 1 (lower is better) Translates to: EDPKNSCNVSKYIGK*LNISPSGSRGRRIG Trigger: CCCTATCCTCCTTCCTCTGCTCCCTGAAGGACTGATGTTCAGGCATTTGCCAATATACTTTGATACATTACAAGAATTTTTAGGGTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR CCA 90 bp | TATTTAAGAAATGAACACTGGCTTGGTTATGTAAATGTACTGACATaGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTAAG | + |
Preference number: 1 (lower is better) Translates to: YLRNEHWLGYVNVLT*YFSGQGSQETSGSK Trigger: CTTAGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATTTACATAACCAAGCCAGTGTTCATTTCTTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | GTACCAGAATGGGTTATCCTGGGATTTCAGACTGACATAGACAATTaGACTTTACTGAGAAACAGGCATTGGCATACTCGTGACATGTGT | + |
Preference number: 1 (lower is better) Translates to: VPEWVILGFQTDIDN*TLLRNRHWHTRDMC Trigger: ACACATGTCACGAGTATGCCAATGCCTGTTTCTCAGTAAAGTTCAATTGTCTATGTCAGTCTGAAATCCCAGGATAACCCATTCTGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | TCTCCCGTTTCATGTACCAGAATGGGTTATCCTGGGATTTCAGACTaGCATAGACAATTGAACTTTACTGAGAAACAGGCATTGGCATAC | + |
Preference number: 1 (lower is better) Translates to: SPVSCTRMGYPGISD*HRQLNFTEKQALAY Trigger: GTATGCCAATGCCTGTTTCTCAGTAAAGTTCAATTGTCTATGTCAGTCTGAAATCCCAGGATAACCCATTCTGGTACATGAAACGGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | AGTGAAATATTTATAAGGAATACTTTCCAGTACTTCCCAAGCTGCTaGAAGGTAGCACAACAAACTGGAGTCATGTCCTTCCCTGCTACT | + |
Preference number: 1 (lower is better) Translates to: SEIFIRNTFQYFPSC*KVAQQTGVMSFPAT Trigger: AGTAGCAGGGAAGGACATGACTCCAGTTTGTTGTGCTACCTTTCAGCAGCTTGGGAAGTACTGGAAAGTATTCCTTATAAATATTTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACATGTGAGTaGGTGTGTGTGAGTGAAATATTTATAAGGAATACTTTCCAGTAC | + |
Preference number: 1 (lower is better) Translates to: LCVCVCVCVCVCTCE*VCVSEIFIRNTFQY Trigger: GTACTGGAAAGTATTCCTTATAAATATTTCACTCACACACACTCACTCACATGTGCACACACACACACACACACACACACACACACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | TCTCCTAGAGCCTTTCATGGAAAACACAAACAAGCAAAGCTTTGCTaGGTCCAGGAGCTGCTTAAGAAAACATGTATCTGTAGACAAATT | + |
Preference number: 1 (lower is better) Translates to: SPRAFHGKHKQAKLC*VQELLKKTCICRQI Trigger: AATTTGTCTACAGATACATGTTTTCTTAAGCAGCTCCTGGACTCAGCAAAGCTTTGCTTGTTTGTGTTTTCCATGAAAGGCTCTAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 90 bp | AACAAAACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTTGTTaGAAGTCAATTGTTTCTCCCTACCCTTTCAGCTTAAACTACCTT | + |
Preference number: 1 (lower is better) Translates to: NKTKQELAQFGRFCC*KSIVSPYPFSLNYL Trigger: AAGGTAGTTTAAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 90 bp | AACTGGCAGCTTCTGTATCCAAGGCCATTCATATATATCAAACTATaGGTTGAAGAAGGGATTAGCAAGAATATCACTTTGAAGATGCAG | + |
Preference number: 1 (lower is better) Translates to: NWQLLYPRPFIYIKL*VEEGISKNITLKMQ Trigger: CTGCATCTTCAAAGTGATATTCTTGCTAATCCCTTCTTCAACCCATAGTTTGATATATATGAATGGCCTTGGATACAGAAGCTGCCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAATGCCGCCAGGGCTCTaGAGTGATAGAATGGGGGTG | + |
Preference number: 2 (lower is better) Translates to: VAKARWAQGRPLFTRTPRMPPGL*SDRMGV Trigger: CACCCCCATTCTATCACTTCAGAGCCCTGGCGGCAT...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACAGCTCTTCCTATGTTTTaGTCAGCATGGCTGAGGTTG | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTALPMF*SAWLRL Trigger: CAACCTCAGCCATGCTGATCAAAACATAGGAAGAGC...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACAGGATTGTACTGTGGATaGCATAACAGTGCCAAGACC | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTGLYCG*HNSAKT Trigger: GGTCTTGGCACTGTTATGGCATCCACAGTACAATCC...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAGGTAGCACAACAAACTaGAGTCATGTCCTTCCCTGC | + |
Preference number: 2 (lower is better) Translates to: VAKARWAQGRPLFTRTPRGSTTN*SHVLPC Trigger: GCAGGGAAGGACATGACTCCAGTTTGTTGTGCTACC...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACAGCTTCAAAAGAGTCATaGAGTGCACAAGACTTGGAG | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTASKES*SAQDLE Trigger: CTCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGC...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACATTTTTCCTAGCCCTTTaGATAGAGTGGACCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTFFLAL*IEWTSA Trigger: AGCAGAGGTCCACTCTATCCAAAGGGCTAGGAAAAA...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAGCATTCCTCAAATGCTaGGAAACTCTGGAACCAGGG | + |
Preference number: 2 (lower is better) Translates to: VAKARWAQGRPLFTRTPRAFLKC*ETLEPG Trigger: CCCTGGTTCCAGAGTTTCCCAGCATTTGAGGAATGC...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACATTAAAAGAGGGAAGTTaGAACATCCCAACTTCAAGG | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTLKEGS*NIPTSR Trigger: CCTTGAAGTTGGGATGTTTCAACTTCCCTCTTTTAA...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACAATGAGTGGAAATGTGTaGTTGTCACCAATAGAGGAT | + |
Preference number: 2 (lower is better) Translates to: AGVAKARWAQGRPLFTRTMSGNV*LSPIED Trigger: ATCCTCTATTGGTGACAACCACACATTTCCACTCAT...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAAAGACAGAAAATCTCTaGACTGCTTTGGTGGCTACA | + |
Preference number: 2 (lower is better) Translates to: VAKARWAQGRPLFTRTPRKTENL*TALVAT Trigger: TGTAGCCACCAAAGCAGTGCAGAGATTTTCTGTCTT...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAACCCAAGAAACTTGGTaGTGCTTACATGTTCTCCAT | + |
Preference number: 2 (lower is better) Translates to: VAKARWAQGRPLFTRTPRTQETW*CLHVLH Trigger: ATGGAGAACATGTAAGCACCACCAAGTTTCTTGGGT...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | ACAGTGTTTGCAATTGTGTGTGTGGCTTGCTCTCTGTCTTCAGTGTaGTGGGCACCTTCAGAGTGGGCCTGCCAAAGGCTGGAGCTTCAG | + |
Preference number: 2 (lower is better) Translates to: TVFAIVCVACSLSSV*WAPSEWACQRLELQ Trigger: CTGAAGCTCCAGCCTTTGGCAGGCCCACTCTGAAGGTGCCCACAACACTGAAGACAGAGAGCAAGCCACACACACAATTGCAAACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | GGACAGGTCACCCTCCTCCCAGCCAATGCCCTCTACAGTCCTCACTaGCTCAGAACTGCTATCAAAATGCTGTGGGATTCTGGAATCAGC | + |
Preference number: 2 (lower is better) Translates to: GQVTLLPANALYSPH*LRTAIKMLWDSGIS Trigger: GCTGATTCCAGAATCCCACAGCATTTTGATAGCAGTTCTGAGCAAGTGAGGACTGTAGAGGGCATTGGCTGGGAGGAGGGTGACCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCCATGTGTTTGCAGGGTaGAGACAGTTACCGAATCCC | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFHVFAG*RQLPNP Trigger: GGGATTCGGTAACTGTCTTCACCCTGCAAACACATG...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCAGGTTAGAGGAGGCTTaGGTTTGTGTGCCCACACAT | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFRLEEA*VCVPTH Trigger: ATGTGTGGGCACACAAACTCAAGCCTCCTCTAACCT...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | GTGTACCAGACTCTCCTCAGAGTTCACCTTATAAAGCCCCTGGTTTaGCCCCTGAGCAATGGGCAGGCATCTCTCCCGTTTCATGTACCA | + |
Preference number: 2 (lower is better) Translates to: VYQTLLRVHLIKPLV*PLSNGQASLPFHVP Trigger: TGGTACATGAAACGGGAGAGATGCCTGCCCATTGCTCAGGGGCAAAACCAGGGGCTTTATAAGGTGAACTCTGAGGAGAGTCTGGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCGCACAAGACTTGGAGTaGACAAGAGCATCTGGTCAT | + |
Preference number: 2 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLAQDLE*TRASGH Trigger: ATGACCAGATGCTCTTGTGCACTCCAAGTCTTGTGC...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAGGGCCTGCCAAAGGCTaGAGCTTCAGAGACACTAGA | + |
Preference number: 2 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRGPAKG*SFRDTR Trigger: TCTAGTGTCTCTGAAGCTCCAGCCTTTGGCAGGCCC...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCGTAAATGTACTGACATaGTACTTCAGTGGGCAGGGC | + |
Preference number: 2 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLVNVLT*YFSGQG Trigger: GCCCTGCCCACTGAAGTACCATGTCAGTACATTTAC...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATTTTGCCCCTGAGCAATaGGCAGGCATCTCTCCCGTT | + |
Preference number: 2 (lower is better) Translates to: DHHPSNSPDLHTKETKQNFAPEQ*AGISPV Trigger: AACGGGAGAGATGCCTGCCCATTGCTCAGGGGCAAA...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | CAGCTGATCCGCAGTGAAGACCATGATGTGGCAAAGACATTCCCTTaGTTTAATGTCATCCCTGGGCACTCATCCCAGCTCAGTCCCTTT | + |
Preference number: 2 (lower is better) Translates to: QLIRSEDHDVAKTFP*FNVIPGHSSQLSPF Trigger: AAAGGGACTGAGCTGGGATGAGTGCCCAGGGATGACATTAAACAAAGGGAATGTCTTTGCCACATCATGGTCTTCACTGCGGATCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGCTCTATTTCCCCCATTaGTCATCTCTCATCCTAAGC | + |
Preference number: 2 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRLYFPH*SSLILS Trigger: GCTTAGGATGAGAGATGATCAATGGGGGAAATAGAG...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCGGGAGGTTTTGTTGTTaGAAGTCAATTGTTTCTCCC | + |
Preference number: 2 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLGRFCC*KSIVSP Trigger: GGGAGAAACAATTGACTTTCAACAACAAAACCTCCC...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCACTGGTCCCAAGCGATaGAAAAGGAAGATACACAAT | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFTGPKR*KRKIHN Trigger: ATTGTGTATCTTCCTTTTGCATCGCTTGGGACCAGT...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCATGAATGGAAACTTGTaGCTTATATACCTCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFMNGNL*LIYLPG Trigger: GCCTGGGAGGTATATAAGCCACAAGTTTCCATTCAT...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCCTACAAACTAGACCATaGACAAAAACCATGACGGAG | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFLQTRP*TKTMTE Trigger: CTCCGTCATGGTTTTTGTCCATGGTCTAGTTTGTAG...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | AATGTCATCCCTGGGCACTCATCCCAGCTCAGTCCCTTTTCCCTCTaGAAATGGATCTTATTCTTGGCCTCATTAGAGTCACACTGCAGG | + |
Preference number: 2 (lower is better) Translates to: NVIPGHSSQLSPFSL*KWILFLASLESHCR Trigger: CCTGCAGTGTGACTCTAATGAGGCCAAGAATAAGATCCATTTCAAGAGGGAAAAGGGACTGAGCTGGGATGAGTGCCCAGGGATGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCGCAAGAATATCACTTTaGAGATGCAGTTCCTCTTTG | + |
Preference number: 2 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLARISL*RCSSSL Trigger: CAAAGAGGAACTGCATCTTCAAAGTGATATTCTTGC...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAGACTGCACTTCAAACTaGATCTCAGAGAGGTCACCA | + |
Preference number: 2 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRDCTSN*ISERSP Trigger: TGGTGACCTCTCTGAGATTCAGTTTGAAGTGCAGTC...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTATTGTGTGTGTGGCTTaGTCTCTGTCTTCAGTGTTG | + |
Preference number: 2 (lower is better) Translates to: NVLTWYFSGQGSQETSGSIVCVA*SLSSVL Trigger: CAACACTGAAGACAGAGAGCAAGCCACACACACAAT...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGGTGTCTAAGGAGGGGTaGATCTCTCCCTCTCCTCCA | + |
Preference number: 2 (lower is better) Translates to: NQEINTGWHAFLKCWETLVSKEG*ISPSPP Trigger: TGGAGGAGAGGGAGAGATGCACCCCTCCTTAGACAC...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGGTGAAGACCATGATGTaGCAAAGACATTCCCTTTGT | + |
Preference number: 2 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRVKTMM*QRHSLC Trigger: ACAAAGGGAATGTCTTTGCCACATCATGGTCTTCAC...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCTTTCATGTACCAGAATaGGTTATCCTGGGATTTCAG | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFFHVPE*VILGFQ Trigger: CTGAAATCCCAGGATAACCCATTCTGGTACATGAAA...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCAACAACTTCTTATTCTaGGAAGGTGTCTGTGTTAGC | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFNNFLF*EGVCVS Trigger: GCTAACACAGACACCTTCCCAGAATAAGAAGTTGTT...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCGGAACTAGCTCAGTTTaGGAGGTTTTGTTGTTGAAA | + |
Preference number: 2 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFGTSSV*EVLLLK Trigger: TTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCC...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTCATGAGAATAGCTTGTaGTTAAGGACCAGCATTTCC | + |
Preference number: 2 (lower is better) Translates to: NVLTWYFSGQGSQETSGSHENSL*LRTSIS Trigger: GGAAATGCTGGTCCTTAATCACAAGCTATTCTCATG...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCACAATGTCTAGATATTaGTTTGCATCTTTCACAGGG | + |
Preference number: 2 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLTMSRY*FASFTG Trigger: CCCTGTGAAAGATGCAAACCAATATCTAGACATTGT...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGTTTTTGTGCATGGGATaGGGTATAGAGGGGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMFLCMG*GIEGKV Trigger: CACCTTCCCCTCTATACCTCATCCCATGCACAAAAA...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR GCA 90 bp | TTTCCTAGCCCTTTGGATAGAGTGGACCTCTGCTTCCTAGCTGTGTCAAGACAAAATGCTGGATTCAAATaGAACTGGTCCAGGAACCCA | + |
Preference number: 2 (lower is better) Translates to: FPSPLDRVDLCFLAVSRQNAGFK*NWSRNP Trigger: TGGGTTCCTGGACCAGTTGCATTTGAATCCAGCATT...TTGTCTTGACACAGCTAGGAAGCAGAGGTCCACTCTATCCAAAGGGCTAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGGCACTCGCCTCGCTGTaGCAGGAAGCAGACTCATTC | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMALASL*QEADSF Trigger: GAATGAGTCTGCTTCCTGGCACAGCGAGGCGAGTGC...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGTTTTCCCTCTTGAAATaGATCTTATTCTTGGCCTCA | + |
Preference number: 2 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRFSLLK*ILFLAS Trigger: TGAGGCCAAGAATAAGATCCATTTCAAGAGGGAAAA...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR CCA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGACCTGTTCCCTGGGCTaGGACAACCTTGTACTGTGC | + |
Preference number: 2 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQTCSLG*DNLVLC Trigger: GCACAGTACAAGGTTGTCCCAGCCCAGGGAACAGGT...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGGACATGGTACTTCAGTaGGCAGGGCAGCCAGGAGAC | + |
Preference number: 2 (lower is better) Translates to: YLGISMNNYMASQINTARDMVLQ*AGQPGD Trigger: GTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTC...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | TGCCATAACAGTGCCAAGACCCTGCTAATGAGTGGAAATGTGTGGTaGTCACCAATAGAGGATGCTTCAAAAGAGTCATGGAGTGCACAA | + |
Preference number: 2 (lower is better) Translates to: CHNSAKTLLMSGNVW*SPIEDASKESWSAQ Trigger: TTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCCACTCATTAGCAGGGTCTTGGCACTGTTATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | CCTCATCATCTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTaGAAAAATGCTGGATTCAAATGCAACTGGTCCAGGAACCCAGGA | + |
Preference number: 2 (lower is better) Translates to: PHHLRLRLGLINRSS*KNAGFKCNWSRNPG Trigger: TCCTGGGTTCCTGGACCAGTTGCATTTGAATCCAGCATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAGATGATGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGGTCCCTTTTCCCTCTTaGAATGGATCTTATTCTTGG | + |
Preference number: 2 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMVPFPS*NGSYSW Trigger: CCAAGAATAAGATCCATTTCAAGAGGGAAAAGGGAC...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR CCA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAAACCATCACCAATTTTaGGATCTAAAGTTGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRNHHQF*DLKLVW Trigger: CCAAACCAACTTTAGATCCCAAAATTGGTGATGGTT...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | TCCAGGATCCCTCAGGAAAACAGAACTCTCAGATGCACAGATCCTTaGAATAAAGTGGGGCATTATGTGCATAGACACTATGCACATTCT | + |
Preference number: 2 (lower is better) Translates to: SRIPQENRTLRCTDP*NKVGHYVHRHYAHS Trigger: AGAATGTGCATAGTGTCTATGCACATAATGCCCCACTTTATTCAAAGGATCTGTGCATCTGAGAGTTCTGTTTTCCTGAGGGATCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGAGAAGCCAGTTGACTTaGGCCTTATGTGGTAACTAT | + |
Preference number: 2 (lower is better) Translates to: NQEINTGWHAFLKCWETLRSQLT*ALCGNY Trigger: ATAGTTACCACATAAGGCTCAAGTCAACTGGCTTCT...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | CAAGTCTGTACTGAGTGCAAGGGCAAGAGCCTGTCAAGAAAACAAGTAAAAATGCATTTCCACTGCACATaGGCTTTTTGTGCATGGGAT | + |
Preference number: 2 (lower is better) Translates to: QVCTECKGKSLSRKQVKMHFHCT*AFCAWD Trigger: ATCCCATGCACAAAAAGCCCATGTGCAGTGGAAATG...CATTTTTACTTGTTTTCTTGACAGGCTCTTGCCCTTGCACTCAGTACAGACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR CAA 90 bp | CATGTACTTGATTCACCTCTGGTTGTCTCTTCTCTATTTCCCCCATaGATCATCTCTCATCCTAAGCTATGTATGCAGATGCAGATAGAC | + |
Preference number: 2 (lower is better) Translates to: HVLDSPLVVSSLFPP*IISHPKLCMQMQID Trigger: GTCTATCTGCATCTGCATACATAGCTTAGGATGAGAGATGATCAATGGGGGAAATAGAGAAGAGACAACCAGAGGTGAATCAAGTACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGGTAATAGCCATGTTGTaGGCACCTGATCTAAGAAAT | + |
Preference number: 2 (lower is better) Translates to: NQEINTGWHAFLKCWETLVIAML*APDLRN Trigger: ATTTCTTAGATCAGGTGCTCACAACATGGCTATTAC...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGAAAAGAGTCATGGAGTaGACAAGACTTGGAGTGCAC | + |
Preference number: 2 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQKRVME*TRLGVH Trigger: GTGCACTCCAAGTCTTGTGCACTCCATGACTCTTTT...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGTACTTGATTCACCTCTaGTTGTCTCTTCTCTATTTC | + |
Preference number: 2 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMYLIHL*LSLLYF Trigger: GAAATAGAGAAGAGACAACCAGAGGTGAATCAAGTA...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | CAAGTCTGTACTGAGTGCAAGGGCAAGAGCCTGTCAAGAAAACAAGTAAAAATGGACTGTATTAGGCTATaGATTTTGCTAAGCAGAGAG | + |
Preference number: 2 (lower is better) Translates to: QVCTECKGKSLSRKQVKMDCIRL*ILLSRE Trigger: CTCTCTGCTTAGCAAAATTCATAGCCTAATACAGTC...CATTTTTACTTGTTTTCTTGACAGGCTCTTGCCCTTGCACTCAGTACAGACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR TCA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGGACAATGACAAGTTTTaGGATAAGAGGCAACTGTGG | + |
Preference number: 2 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQDNDKF*DKRQLW Trigger: CCACAGTTGCCTCTTATCTCAAAACTTGTCATTGTC...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGCTGAGAAACAGGCATTaGCATACTCGTGACATGTGT | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMLRNRH*HTRDMC Trigger: ACACATGTCACGAGTATGCCAATGCCTGTTTCTCAG...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGCCAAGGAGGCAGAGGTaGTGTCTGTTGTTTTGTTTT | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMPRRQR*CLLFCF Trigger: AAAACAAAACAACAGACACCACCTCTGCCTCCTTGG...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | TTCAATAAAATTAATTCAGCTTTGTGGGATAAAAGCACACCAGGATaGTACTGTGGATGCCATAACAGTGCCAAGACCCTGCTAATGAGT | + |
Preference number: 2 (lower is better) Translates to: FNKINSALWDKSTPG*YCGCHNSAKTLLMS Trigger: ACTCATTAGCAGGGTCTTGGCACTGTTATGGCATCCACAGTACAATCCTGGTGTGCTTTTATCCCACAAAGCTGAATTAATTTTATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | GAACAAAACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTTGTaGAAAGTCAATTGTTTCTCCCTACCCTTTCAGCTTAAACTACCT | + |
Preference number: 2 (lower is better) Translates to: EQNKAGTSSVWEVLL*KVNCFSLPFQLKLP Trigger: AGGTAGTTTAAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTTTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGGTCACCAATAGAGGATaGTTCAAAAGAGTCATGGAG | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMVTNRG*FKRVME Trigger: CTCCATGACTCTTTTGAAGCATCCTCTATTGGTGAC...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGCTAAACATCTTTAACTaGAGCAACATATTACCAGGT | + |
Preference number: 2 (lower is better) Translates to: NQEINTGWHAFLKCWETLLNIFN*SNILPG Trigger: ACCTGGTAATATGTTGCTGCAGTTAAAGATGTTTAG...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGCAGCATTTCCATGTTTaGAGATTCCATGAAAGTCTG | + |
Preference number: 2 (lower is better) Translates to: YLGISMNNYMASQINTARQHFHV*RFHESL Trigger: CAGACTTTCATGGAATCTTCAAACATGGAAATGCTG...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGTGTGTCAAGACAAATTaGTGTGGAATGGGATTCAGT | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMCVKTN*CGMGFS Trigger: ACTGAATCCCATTCCACATCAATTTGTCTTGACACA...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR GCA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGATGCAAACATGGAAATaGCTGGTTGTCATAGAAAGA | + |
Preference number: 2 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQMQTWK*LVVIER Trigger: TCTTTCTATGACAACCAGGCATTTCCATGTTTGCAT...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGAATATGGCTGATGCTTaGCAGTCTGCAATAAAGTCA | + |
Preference number: 2 (lower is better) Translates to: YLGISMNNYMASQINTARNMADA*QSAIKS Trigger: TGACTTTATTGCAGACTGCCAAGCATCAGCCATATT...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | AAAGAACAAAACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTaGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGCTTAAACTA | + |
Preference number: 2 (lower is better) Translates to: KEQNKAGTSSVWEVL*LKVNCFSLPFQLKL Trigger: TAGTTTAAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTTTTGTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 90 bp | AGAAAAGAACAAAACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTaGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGCTTAAA | + |
Preference number: 2 (lower is better) Translates to: RKEQNKAGTSSVWEV*LLKVNCFSLPFQLK Trigger: TTTAAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTTTTGTTCTTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGGGGACTACAGGAAGTTaGAATTTCCAGAAATGTAAA | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMGTTGS*NFQKCK Trigger: TTTACATTTCTGGAAATTTCAACTTCCTGTAGTCCC...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR TCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGGTCCGTCATAAGAAATaGAAACATTGTAGTCACTTC | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMVRHKK*KHCSHF Trigger: GAAGTGACTACAATGTTTTCATTTCTTATGACGGAC...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGATTAATTCAGCTTTGTaGGATAAAAGCACACCAGGA | + |
Preference number: 2 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMINSAL*DKSTPG Trigger: TCCTGGTGTGCTTTTATCCCACAAAGCTGAATTAAT...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 72 bp | CAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCTaGCTGGGTTTGGCCCTGAGGGCTCGGCGGGGTCGC | + |
Preference number: 3 (lower is better) Translates to: QRAAQPQGSGGF*LGLALRARRGR Trigger: GCGACCCCGCCGAGCCCTCAGGGCCAAACCCAGCCAGAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 72 bp | GCAGGGCGCGGTGCCGCCGGGGTCGCCAAGGCACGTTaGGCACAAGGGCGCCCTCTCTTCACTAGGACACCA | + |
Preference number: 3 (lower is better) Translates to: AGRGAAGVAKAR*AQGRPLFTRTP Trigger: TGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGCGGCACCGCGCCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 72 bp | ACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTaGCTTCTGGCTGGGTTTGGCCCTGAGGGCTCGGCG | + |
Preference number: 3 (lower is better) Translates to: TNTEGGPATRLR*LLAGFGPEGSA Trigger: CGCCGAGCCCTCAGGGCCAAACCCAGCCAGAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CAA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACATGGGCTGGGACAACCTaGTACTGTGCTTACAGATAT | + |
Preference number: 3 (lower is better) Translates to: AGVAKARWAQGRPLFTRTWAGTT*YCAYRY Trigger: ATATCTGTAAGCACAGTACAAGGTTGTCCCAGCCCA...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CAA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACATTCAGTTCAGGTGGCTaGCTTCTACTGTTTCCAGAT | + |
Preference number: 3 (lower is better) Translates to: AGVAKARWAQGRPLFTRTFSSGG*LLLFPD Trigger: ATCTGGAAACAGTAGAAGCAAGCCACCTGAACTGAA...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR TCA 72 bp | CAAACAGATTCAAGAAGCCTGATGCCGCCAGGGCTCTaGAGTGATAGAATGGGGGTGCAACATCCGGGGACC | + |
Preference number: 3 (lower is better) Translates to: QTDSRSLMPPGL*SDRMGVQHPGT Trigger: GGTCCCCGGATGTTGCACCCCCATTCTATCACTTCAGAGCCCTGGCGGCATCAGGCTTCTTGAATCTGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | AGCTTGGACAGGACAGGTCACCCTCCTCCCAGCCAATaGCCTCTACAGTCCTCACTTGCTCAGAACTGCTAT | + |
Preference number: 3 (lower is better) Translates to: SLDRTGHPPPSQ*PLQSSLAQNCY Trigger: ATAGCAGTTCTGAGCAAGTGAGGACTGTAGAGGGCATTGGCTGGGAGGAGGGTGACCTGTCCTGTCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | ATTGTGTGTGTGGCTTGCTCTCTGTCTTCAGTGTTGTaGGCACCTTCAGAGTGGGCCTGCCAAAGGCTGGAG | + |
Preference number: 3 (lower is better) Translates to: IVCVACSLSSVL*APSEWACQRLE Trigger: CTCCAGCCTTTGGCAGGCCCACTCTGAAGGTGCCCACAACACTGAAGACAGAGAGCAAGCCACACACACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GAGCAGAGGAAGGAGGATAGGGAATCCAAGTCTGTACTGAGTGCAAGGGCAAGAAGTCTCAGCCCCAGGTaGCTTTCTACAGTAGGGGCA | + |
Preference number: 3 (lower is better) Translates to: EQRKEDRESKSVLSARARSLSPR*LSTVGA Trigger: TGCCCCTACTGTAGAAAGCAACCTGGGGCTGAGACT...TCTTGCCCTTGCACTCAGTACAGACTTGGATTCCCTATCCTCCTTCCTCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR CCA 72 bp | TGTTGTGGGCACCTTCAGAGTGGGCCTGCCAAAGGCTaGAGCTTCAGAGACACTAGAGCACTAGATGCAAAA | + |
Preference number: 3 (lower is better) Translates to: CCGHLQSGPAKG*SFRDTRALDAK Trigger: TTTTGCATCTAGTGCTCTAGTGTCTCTGAAGCTCCAGCCTTTGGCAGGCCCACTCTGAAGGTGCCCACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCTTGGTTGATCACTACTaGTCTGGGGACAGTGGAAAG | + |
Preference number: 3 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFLVDHY*SGDSGK Trigger: CTTTCCACTGTCCCCAGACAAGTAGTGATCAACCAA...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTCAGGTTAGAGGAGGCTaGAGTTTGTGTGCCCACACA | + |
Preference number: 3 (lower is better) Translates to: NVLTWYFSGQGSQETSGSQVRGG*SLCAHT Trigger: TGTGTGGGCACACAAACTCAAGCCTCCTCTAACCTG...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCAATTGTGTGTGTGGCTaGCTCTCTGTCTTCAGTGTT | + |
Preference number: 3 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLNCVCG*LSVFSV Trigger: AACACTGAAGACAGAGAGCAAGCCACACACACAATT...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | GTAGATCCTGTGTGTACGGGCACTGGTCCCAAGCGATaGAAAAGGAAGATACACAATGGGGAGGATCTGAGA | + |
Preference number: 3 (lower is better) Translates to: VDPVCTGTGPKR*KRKIHNGEDLR Trigger: TCTCAGATCCTCCCCATTGTGTATCTTCCTTTTGCATCGCTTGGGACCAGTGCCCGTACACACAGGATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGTTGATTCACCTCTGGTaGTCTCTTCTCTATTTCCCC | + |
Preference number: 3 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRLIHLW*SLLYFP Trigger: GGGGAAATAGAGAAGAGACAACCAGAGGTGAATCAA...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR-3UTR CAA 90 bp | TTTCCTAGCCCTTTGGATAGAGTGGACCTCTGCTTCCTAGCTGTGTCAAGACAAAGGCAACTGTGGGGTTaGTCTAAGGTAGCAGGGAGT | + |
Preference number: 3 (lower is better) Translates to: FPSPLDRVDLCFLAVSRQRQLWG*SKVAGS Trigger: ACTCCCTGCTACCTTAGACAAACCCCACAGTTGCCT...TTGTCTTGACACAGCTAGGAAGCAGAGGTCCACTCTATCCAAAGGGCTAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | TCTGAGCTGACAGTGTTTGCAATTGTGTGTGTGGCTTaGTCTCTGTCTTCAGTGTTGTGGGCACCTTCAGAG | + |
Preference number: 3 (lower is better) Translates to: SELTVFAIVCVA*SLSSVLWAPSE Trigger: CTCTGAAGGTGCCCACAACACTGAAGACAGAGAGCAAGCCACACACACAATTGCAAACACTGTCAGCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGTGCACTACATGTTTCTaGGGGGAGGAGGCCTGCAAA | + |
Preference number: 3 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMCTTCF*GEEACK Trigger: TTTGCAGGCCTCCTCCCCCAAGAAACATGTAGTGCA...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR-3UTR CAA 90 bp | TTTCCTAGCCCTTTGGATAGAGTGGACCTCTGCTTCCTAGCTGTGTCAAGACAATGGAGTGCACAAGACTaGGAGTGCACAAGAGCATCT | + |
Preference number: 3 (lower is better) Translates to: FPSPLDRVDLCFLAVSRQWSAQD*ECTRAS Trigger: AGATGCTCTTGTGCACTCCAAGTCTTGTGCACTCCA...TTGTCTTGACACAGCTAGGAAGCAGAGGTCCACTCTATCCAAAGGGCTAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | AGCAGAGGAAGGAGGATAGGGAATCCAAGTCTGTACTaGGTGCAAGGGCAAGAGCCTGTCAAGAAAACAAGT | + |
Preference number: 3 (lower is better) Translates to: SRGRRIGNPSLY*VQGQEPVKKTS Trigger: ACTTGTTTTCTTGACAGGCTCTTGCCCTTGCACTCAGTACAGACTTGGATTCCCTATCCTCCTTCCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR GCA 72 bp | GTAGAACGCCGCTTCCAAACAAAGGCCTATCCACATTaGATGTGTTTGCAGGGTGAAGACAGTTACCGAATC | + |
Preference number: 3 (lower is better) Translates to: VERRFQTKAYPH*MCLQGEDSYRI Trigger: GATTCGGTAACTGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCGGCGTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | CAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATaGTGGGAAACTCTGGAACCAGGGCAGATGGACTTC | + |
Preference number: 3 (lower is better) Translates to: QEINTGWHAFLK*WETLEPGQMDF Trigger: GAAGTCCATCTGCCCTGGTTCCAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | AGCCAATGCCCTCTACAGTCCTCACTTGCTCAGAACTaGTATCAAAATGCTGTGGGATTCTGGAATCAGCCT | + |
Preference number: 3 (lower is better) Translates to: SQCPLQSSLAQN*YQNAVGFWNQP Trigger: AGGCTGATTCCAGAATCCCACAGCATTTTGATAGCAGTTCTGAGCAAGTGAGGACTGTAGAGGGCATTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | CTTGCTCAGAACTGCTATCAAAATGCTGTGGGATTCTaGAATCAGCCTACCTTAGGCTGTAGAGGTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: LAQNCYQNAVGF*NQPTLGCRGGK Trigger: CTTCCCACCTCTACAGCCTAAGGTAGGCTGATTCCAGAATCCCACAGCATTTTGATAGCAGTTCTGAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCACATTTTTCTGTGAATaGGTATTCTGTTTGCTGCCT | + |
Preference number: 3 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFTFFCE*VFCLLP Trigger: AGGCAGCAAACAGAATACCAATTCACAGAAAAATGT...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCCAAAGCTGTTATTACTaGTCCCTGACAATACCAATT | + |
Preference number: 3 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFQSCYY*SLTIPI Trigger: AATTGGTATTGTCAGGGACAAGTAATAACAGCTTTG...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | GAGCAGAGGAAGGAGGATAGGGAATCCAAGTCTGTACTGAGTGCAAGGGCAAGAAGTCCCTTTTCCCTCTaGAAATGGATCTTATTCTTG | + |
Preference number: 3 (lower is better) Translates to: EQRKEDRESKSVLSARARSPFSL*KWILFL Trigger: CAAGAATAAGATCCATTTCAAGAGGGAAAAGGGACT...TCTTGCCCTTGCACTCAGTACAGACTTGGATTCCCTATCCTCCTTCCTCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR GCA 72 bp | GTCACCAATAGAGGATGCTTCAAAAGAGTCATGGAGTaGACAAGACTTGGAGTGCACAAGAGCATCTGGTCA | + |
Preference number: 3 (lower is better) Translates to: VTNRGCFKRVME*TRLGVHKSIWS Trigger: TGACCAGATGCTCTTGTGCACTCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | TCTACAGTCCTCACTTGCTCAGAACTGCTATCAAAATaGTGTGGGATTCTGGAATCAGCCTACCTTAGGCTG | + |
Preference number: 3 (lower is better) Translates to: STVLTCSELLSK*CGILESAYLRL Trigger: CAGCCTAAGGTAGGCTGATTCCAGAATCCCACAGCATTTTGATAGCAGTTCTGAGCAAGTGAGGACTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | AATGAACACTGGCTTGGTTATGTAAATGTACTGACATaGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCA | + |
Preference number: 3 (lower is better) Translates to: NEHWLGYVNVLT*YFSGQGSQETS Trigger: TGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATTTACATAACCAAGCCAGTGTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | AGCAGACTCATTCACACATTAAGAACTCAGCCTGTTTaGGGAGAAAATCAGAAGGTGGACCCATGTCACCCT | + |
Preference number: 3 (lower is better) Translates to: SRLIHTLRTQPV*GENQKVDPCHP Trigger: AGGGTGACATGGGTCCACCTTCTGATTTTCTCCTCAAACAGGCTGAGTTCTTAATGTGTGAATGAGTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | CAAATTGATGTGGAATGGGATTCAGTTCAGGTGGCTTaGTTCTACTGTTTCCAGATGTGGCATTGTGTAGGG | + |
Preference number: 3 (lower is better) Translates to: QIDVEWDSVQVA*FYCFQMWHCVG Trigger: CCCTACACAATGCCACATCTGGAAACAGTAGAAGCAAGCCACCTGAACTGAATCCCATTCCACATCAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | CACCCAAGAAACTTGGTGGTGCTTACATGTTCTCCATaGCAGCTTCTGATCAGGCATCTCATCTTGATTTGT | + |
Preference number: 3 (lower is better) Translates to: HPRNLVVLTCSP*QLLIRHLILIC Trigger: ACAAATCAAGATGAGATGCCTGATCAGAAGCTGGCATGGAGAACATGTAAGCACCACCAAGTTTCTTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | TGGTTGTCACCAATAGAGGATGCTTCAAAAGAGTCATaGAGTGCACAAGACTTGGAGTGCACAAGAGCATCT | + |
Preference number: 3 (lower is better) Translates to: WLSPIEDASKES*SAQDLECTRAS Trigger: AGATGCTCTTGTGCACTCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | TCAGTTCAGGTGGCTTGCTTCTACTGTTTCCAGATGTaGCATTGTGTAGGGCTACAACACGCATCTAAACAT | + |
Preference number: 3 (lower is better) Translates to: SVQVACFYCFQM*HCVGLQHASKH Trigger: ATGTTTAGATGCGTGTTGTAGCCCTACACAATGCCACATCTGGAAACAGTAGAAGCAAGCCACCTGAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | CTGTCTGTCCTGAGCACTTCATTAGCATTCAGTTCTTaGACCACGATTAGTCTTAGACCCACTGGTTATCAC | + |
Preference number: 3 (lower is better) Translates to: LSVLSTSLAFSS*TTISLRPTGYH Trigger: GTGATAACCAGTGGGTCTAAGACTAATCGTGGTCCAAGAACTGAATGCTAATGAAGTGCTCAGGACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATATCAAACTATGGGTaGAAGAAGGGATTAGCAAGA | + |
Preference number: 3 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRISNYG*KKGLAR Trigger: TCTTGCTAATCCCTTCTTCAACCCATAGTTTGATAT...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | GTGTGTTGGCTCTTCCTATGTTTTGATCAGCATGGCTaGGGTTGGGCAAGAGACAATGACAATGACAAGTTT | + |
Preference number: 3 (lower is better) Translates to: VCWLFLCFDQHG*GWARDNDNDKF Trigger: AAACTTGTCATTGTCATTGTCTCTTGCCCAACCTCAGCCATGCTGATCAAAACATAGGAAGAGCCAACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | CACTGGTCCCAAGCGATGCAAAAGGAAGATACACAATaGGGAGGATCTGAGACAATGTCTAGATATTGGTTT | + |
Preference number: 3 (lower is better) Translates to: HWSQAMQKEDTQ*GGSETMSRYWF Trigger: AAACCAATATCTAGACATTGTCTCAGATCCTCCCCATTGTGTATCTTCCTTTTGCATCGCTTGGGACCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | AACAGTGCCAAGACCCTGCTAATGAGTGGAAATGTGTaGTTGTCACCAATAGAGGATGCTTCAAAAGAGTCA | + |
Preference number: 3 (lower is better) Translates to: NSAKTLLMSGNV*LSPIEDASKES Trigger: TGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCCACTCATTAGCAGGGTCTTGGCACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR CCA 72 bp | CAAGACAAATTGATGTGGAATGGGATTCAGTTCAGGTaGCTTGCTTCTACTGTTTCCAGATGTGGCATTGTG | + |
Preference number: 3 (lower is better) Translates to: QDKLMWNGIQFR*LASTVSRCGIV Trigger: CACAATGCCACATCTGGAAACAGTAGAAGCAAGCCACCTGAACTGAATCCCATTCCACATCAATTTGTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGCTGTGTCAAGACAAATaGATGTGGAATGGGATTCAG | + |
Preference number: 3 (lower is better) Translates to: NQEINTGWHAFLKCWETLLCQDK*MWNGIQ Trigger: CTGAATCCCATTCCACATCAATTTGTCTTGACACAG...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | ATCACTGTGTGTTCATGCCTAATCACACAAAGTGGGTaGCTAGCTGTTAGGGAGTACACCATAGAAGTTAGA | + |
Preference number: 3 (lower is better) Translates to: ITVCSCLITQSG*LAVREYTIEVR Trigger: TCTAACTTCTATGGTGTACTCCCTAACAGCTAGTCACCCACTTTGTGTGATTAGGCATGAACACACAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR TCA 72 bp | CACGCTAGGTACAGAGACAAAAGTGGTTGGCATTCTTaGTGGTGGTTGAAATCACAGATACAGAATACATGG | + |
Preference number: 3 (lower is better) Translates to: HARYRDKSGWHS*WWLKSQIQNTW Trigger: CCATGTATTCTGTATCTGTGATTTCAACCACCATCAAGAATGCCAACCACTTTTGTCTCTGTACCTAGCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR GCA 72 bp | AATGAGTGGAAATGTGTGGTTGTCACCAATAGAGGATaGTTCAAAAGAGTCATGGAGTGCACAAGACTTGGA | + |
Preference number: 3 (lower is better) Translates to: NEWKCVVVTNRG*FKRVMECTRLG Trigger: TCCAAGTCTTGTGCACTCCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCCACTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGCCACATTGCATGTGTTaGCAGGGTGAAGACAGTTAC | + |
Preference number: 3 (lower is better) Translates to: YLGISMNNYMASQINTARPHCMC*QGEDSY Trigger: GTAACTGTCTTCACCCTGCAAACACATGCAATGTGG...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGAAAAGCACACCAGGATaGTACTGTGGATGCCATAAC | + |
Preference number: 3 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQKSTPG*YCGCHN Trigger: GTTATGGCATCCACAGTACAATCCTGGTGTGCTTTT...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGGAATTGGTATTCTGTTaGCTGCCTTCCTATTTCCAA | + |
Preference number: 3 (lower is better) Translates to: NQEINTGWHAFLKCWETLELVFC*LPSYFQ Trigger: TTGGAAATAGGAAGGCAGCAAACAGAATACCAATTC...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | ATTCTTGTAATGTATCAAAGTATATTGGCAAATGCCTaGACATCAGTCCTTCAGGGAGCAGAGGAAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: ILVMYQSILANA*TSVLQGAEEGG Trigger: TCCTCCTTCCTCTGCTCCCTGAAGGACTGATGTTCAGGCATTTGCCAATATACTTTGATACATTACAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
||
3UTR TCA 72 bp | TTGAACTTTACTGAGAAACAGGCATTGGCATACTCGTaGCATGTGTGTTGGCTCTTCCTATGTTTTGATCAG | + |
Preference number: 3 (lower is better) Translates to: LNFTEKQALAYS*HVCWLFLCFDQ Trigger: CTGATCAAAACATAGGAAGAGCCAACACACATGTCACGAGTATGCCAATGCCTGTTTCTCAGTAAAGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | AAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTTGTTaGAAGTCAATTGTTTCTCCCTACCCTTTCAGCTTA | + |
Preference number: 3 (lower is better) Translates to: KQELAQFGRFCC*KSIVSPYPFSL Trigger: TAAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | ACAGAGACAAAAGTGGTTGGCATTCTTGATGGTGGTTaGAATCACAGATACAGAATACATGGATCCAGAAGC | + |
Preference number: 3 (lower is better) Translates to: TETKVVGILDGG*NHRYRIHGSRS Trigger: GCTTCTGGATCCATGTATTCTGTATCTGTGATTTCAACCACCATCAAGAATGCCAACCACTTTTGTCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR-3UTR CAA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGAGAAGCCGACTGTACTaGTTCAGAGAAATACAGAGA | + |
Preference number: 3 (lower is better) Translates to: YLGISMNNYMASQINTARRSRLY*FREIQR Trigger: TCTCTGTATTTCTCTGAACAAGTACAGTCGGCTTCT...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCACATGTGAGTaGGTGTGTGTGAGTGAAATATTTATAAGGAATACT | + |
Preference number: 3 (lower is better) Translates to: CVCVCVCVCTCE*VCVSEIFIRNT Trigger: AGTATTCCTTATAAATATTTCACTCACACACACTCACTCACATGTGCACACACACACACACACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | CACAAACACACAGACAGCCATTATTACCCTTACAAATaGGAGGTGTGTCCGTTTTCACATCTACTTCATCTA | + |
Preference number: 3 (lower is better) Translates to: HKHTDSHYYPYK*EVCPFSHLLHL Trigger: TAGATGAAGTAGATGTGAAAACGGACACACCTCTCATTTGTAAGGGTAATAATGGCTGTCTGTGTGTTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
||
3UTR TCA 72 bp | TTAAAGCATGTGATCCCATATTTTGGGGAAATACAATaGTTGTCTCTTACTCTATCTGGGCCCTTCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: LKHVIPYFGEIQ*LSLTLSGPFSS Trigger: GGAAGAGAAGGGCCCAGATAGAGTAAGAGACAATCATTGTATTTCCCCAAAATATGGGATCACATGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CAA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGAGACAAACAGCAGTCTaGGTCTCAGGAACAATTTTT | + |
Preference number: 3 (lower is better) Translates to: YLGISMNNYMASQINTARRQTAV*VSGTIF Trigger: AAAAATTGTTCCTGAGACCAAGACTGCTGTTTGTCT...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CAA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGGACCTTTCCATATCATaGTGTTCTAAAGTTCCAAAC | + |
Preference number: 3 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQDLSIS*CSKVPN Trigger: GTTTGGAACTTTAGAACACAATGATATGGAAAGGTC...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR-3UTR CAA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGGTTGTTGAAAGTCAATaGTTTCTCCCTACCCTTTCA | + |
Preference number: 3 (lower is better) Translates to: YLGISMNNYMASQINTARVVESQ*FLPTLS Trigger: TGAAAGGGTAGGGAGAAACAATTGACTTTCAACAAC...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR GCA 72 bp | AAAAATTCTTGTAATGTATCAAAGTATATTGGCAAATaGCTGAACATCAGTCCTTCAGGGAGCAGAGGAAGG | + |
Preference number: 3 (lower is better) Translates to: KNSCNVSKYIGK*LNISPSGSRGR Trigger: CCTTCCTCTGCTCCCTGAAGGACTGATGTTCAGGCATTTGCCAATATACTTTGATACATTACAAGAATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR-3UTR CAA 90 bp | TACCTAGGTATATCTATGAACAACTACATGGCTTCCCAAATAAACACTGCAAGGTCAGTTTGGGAGGTTTaGTTGTTGAAAGTCAATTGT | + |
Preference number: 3 (lower is better) Translates to: YLGISMNNYMASQINTARSVWEV*LLKVNC Trigger: ACAATTGACTTTCAACAACAAAACCTCCCAAACTGA...CCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGATATACCTAGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR GCA 72 bp | ATCTATGAACAACTACATGGCTTCCCAAATAAACACTaGAAGGCCAGTGTACCATATAACTATCAAGAAGTA | + |
Preference number: 3 (lower is better) Translates to: IYEQLHGFPNKH*KASVPYNYQEV Trigger: TACTTCTTGATAGTTATATGGTACACTGGCCTTGCAGTGTTTATTTGGGAAGCCATGTAGTTGTTCATAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CCA 72 bp | TGTGTGTGTAAGTATTCTAGTTCACATAACCTAACCTaGTTAACTCAAAGCATGGGAAACTTTCTAATGACC | + |
Preference number: 3 (lower is better) Translates to: CVCKYSSSHNLT*LTQSMGNFLMT Trigger: GGTCATTAGAAAGTTTCCCATGCTTTGAGTTAACCAGGTTAGGTTATGTGAACTAGAATACTTACACACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACTCCTGGACCGAGCATaGAAGCCCGAGAACAGGCAG | + |
Preference number: 4 (lower is better) Translates to: AGVAKARWAQGRPLFTRTLLDRA*KPENRQ Trigger: CTGCCTGTTCTCGGGCTTGCATGCTCGGTCCAGGAG...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGACGTGATCATCACAGGTaGTGGGGGCCTCATGTCCAG | + |
Preference number: 4 (lower is better) Translates to: VAKARWAQGRPLFTRTPRRDHHR*WGPHVQ Trigger: CTGGACATGAGGCCCCCACCACCTGTGATGATCACG...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AGAGGGCCCTCGAGGACAGCAGGACATCCAGTGCTCTaGCAAGCCACTGGTGTGAGGCCAGCCTCTGACCAT | + |
Preference number: 4 (lower is better) Translates to: RGPSRTAGHPVL*QATGVRPASDH Trigger: ATGGTCAGAGGCTGGCCTCACACCAGTGGCTTGCAAGAGCACTGGATGTCCTGCTGTCCTCGAGGGCCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | GCCGGGGTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACAAGCTCTGGCAGTCTTTaGCATCCAGACACTCATAGA | + |
Preference number: 4 (lower is better) Translates to: AGVAKARWAQGRPLFTRTSSGSL*HPDTHR Trigger: TCTATGAGTGTCTGGATGGCAAAGACTGCCAGAGCT...TGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGACCCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGATCCAGGAGCCAGACTTaGACTCCTCATAGCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: VAKARWAQGRPLFTRTPRSRSQT*TPHSSR Trigger: TCTGCTGCTATGAGGAGTGCAAGTCTGGCTCCTGGA...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GCCGCTTCCAAACAAAGGCCTATCCACATTGCATGTGTTTGCAGGGTGAAGACAGCTGGTTGGGTGTGGTaGTCCAGTGAGCCTCCGCTG | + |
Preference number: 4 (lower is better) Translates to: AASKQRPIHIACVCRVKTAGWVW*SSEPPL Trigger: CAGCGGAGGCTCACTGGATCACCACACCCAACCAGC...TGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | GAGCAGAGGAAGGAGGATAGGGAATCCAAGTCTGTACTGAGTGCAAGGGCAAGACTCCTGGACCGAGCATaGAAGCCCGAGAACAGGCAG | + |
Preference number: 4 (lower is better) Translates to: EQRKEDRESKSVLSARARLLDRA*KPENRQ Trigger: CTGCCTGTTCTCGGGCTTGCATGCTCGGTCCAGGAG...TCTTGCCCTTGCACTCAGTACAGACTTGGATTCCCTATCCTCCTTCCTCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR CAA 72 bp | GCAATTGTGTGTGTGGCTTGCTCTCTGTCTTCAGTGTaGTGGGCACCTTCAGAGTGGGCCTGCCAAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: AIVCVACSLSSV*WAPSEWACQRL Trigger: CAGCCTTTGGCAGGCCCACTCTGAAGGTGCCCACAACACTGAAGACAGAGAGCAAGCCACACACACAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCCAGATTCTGAGGAGCTaGTTGGGTGTGGTGATCCAG | + |
Preference number: 4 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFQILRS*LGVVIQ Trigger: CTGGATCACCACACCCAACCAGCTCCTCAGAATCTG...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCTACATCGGTGTCTTGTaGTTTGGGTGCCAAGACCCA | + |
Preference number: 4 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLYIGVL*FGCQDP Trigger: TGGGTCTTGGCACCCAAATCACAAGACACCGATGTA...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | CCTGGGAGATTGTTCAGTAGGTGCAAGCACAACCCTACCAGAAGCACTCGCCTCAGCCGCCATGATTTCTaGTCAGCTGCCTCAACTGAA | + |
Preference number: 4 (lower is better) Translates to: PGRLFSRCKHNPTRSTRLSRHDF*SAASTE Trigger: TTCAGTTGAGGCAGCTGATCAGAAATCATGGCGGCT...GAGGCGAGTGCTTCTGGTAGGGTTGTGCTTGCACCTACTGAACAATCTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGTACATCGGTGTCTTGTaGTTTGGGTGCCAAGACCCA | + |
Preference number: 4 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRYIGVL*FGCQDP Trigger: TGGGTCTTGGCACCCAAATCACAAGACACCGATGTA...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR TCA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTCTGATAGAGCCGCCATaGTTTCTGATCAGCTGCCTC | + |
Preference number: 4 (lower is better) Translates to: NVLTWYFSGQGSQETSGSLIEPP*FLISCL Trigger: GAGGCAGCTGATCAGAAATCATGGCGGCTCTATCAG...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATAGAGGTCCATGGCAGTaGCATAGGACACCCGAGGCA | + |
Preference number: 4 (lower is better) Translates to: DHHPSNSPDLHTKETKQNRGPWQ*HRTPEA Trigger: TGCCTCGGGTGTCCTATGTCACTGCCATGGACCTCT...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTGTCAAGGGGCAGGCATaGGCATCCATAGGGAAGTTA | + |
Preference number: 4 (lower is better) Translates to: NVLTWYFSGQGSQETSGSVKGQA*ASIGKL Trigger: TAACTTCCCTATGGATGCGCATGCCTGCCCCTTGAC...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GCCGCTTCCAAACAAAGGCCTATCCACATTGCATGTGTTTGCAGGGTGAAGACACCCAATAGACCAGGTTaGACAGCAGGAAGGATGTCG | + |
Preference number: 4 (lower is better) Translates to: AASKQRPIHIACVCRVKTPNRPG*TAGRMS Trigger: CGACATCCTTCCTGCTGTTCAACCTGGTCTATTGGG...TGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | ACCCTCCTCCCAGCCAATGCCCTCTACAGTCCTCACTaGCTCAGAACTGCTATCAAAATGCTGTGGGATTCT | + |
Preference number: 4 (lower is better) Translates to: TLLPANALYSPH*LRTAIKMLWDS Trigger: AGAATCCCACAGCATTTTGATAGCAGTTCTGAGCAAGTGAGGACTGTAGAGGGCATTGGCTGGGAGGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATCATCATTCCAGATTCTaGGGAGCTGGTTGGGTGTGG | + |
Preference number: 4 (lower is better) Translates to: DHHPSNSPDLHTKETKQNHHSRF*GAGWVW Trigger: CCACACCCAACCAGCTCCTCAGAATCTGGAATGATG...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | AATGTACTGACATGGTACTTCAGTGGGCAGGGCAGCCAGGAGACATCAGGATCTTCCATAGGGAAGTTATaGAGTTGCAGCTGGCACTCT | + |
Preference number: 4 (lower is better) Translates to: NVLTWYFSGQGSQETSGSSIGKL*SCSWHS Trigger: AGAGTGCCAGCTGCAACTGCATAACTTCCCTATGGA...AGATCCTGATGTCTCCTGGCTGCCCTGCCCACTGAAGTACCATGTCAGTACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | CGCAGTGAAGACCATGATGTGGCAAAGACATTCCCTTaGTTTAATGTCATCCCTGGGCACTCATCCCAGCTC | + |
Preference number: 4 (lower is better) Translates to: RSEDHDVAKTFP*FNVIPGHSSQL Trigger: GAGCTGGGATGAGTGCCCAGGGATGACATTAAACAAAGGGAATGTCTTTGCCACATCATGGTCTTCACTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR GCA 90 bp | GCCGCTTCCAAACAAAGGCCTATCCACATTGCATGTGTTTGCAGGGTGAAGACAGAACCACAGTCAGTATaGAGGGGATATACGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: AASKQRPIHIACVCRVKTEPQSV*RGYTSG Trigger: TCCAGACGTATATCCCCTGCATACTGACTGTGGTTC...TGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATCGGTGTCTTGTGATTTaGGTGCCAAGACCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: DHHPSNSPDLHTKETKQNRCLVI*VPRPTS Trigger: AGAAGTGGGTCTTGGCACCCAAATCACAAGACACCG...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGATTTTCATTGTGCTGTTaGATCGAAGGCGACTGTCTG | + |
Preference number: 4 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRFSLCC*IEGDCL Trigger: CAGACAGTCGCCTTCGATTCAACAGCACAATGAAAA...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATTGGAATTGTTTAACGTaGTCATCACAGGTGGTGGGG | + |
Preference number: 4 (lower is better) Translates to: DHHPSNSPDLHTKETKQNWNCLT*SSQVVG Trigger: CCCCACCACCTGTGATGATCACGTTAAACAATTCCA...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGCGGTGTCTTGTGATTTaGGTGCCAAGACCCACTTCT | + |
Preference number: 4 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMRCLVI*VPRPTS Trigger: AGAAGTGGGTCTTGGCACCCAAATCACAAGACACCG...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CCA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGATCGAAAGATGGTGTCTaGAATCCATATCAAGCCCAC | + |
Preference number: 4 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRSKDGV*NPYQAH Trigger: GTGGGCTTGATATGGATTCCAGACACCATCTTTCGA...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGGAGCATGTTTATGGATaGCACAGGACCAATGCTGTT | + |
Preference number: 4 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMEHVYG*HRTNAV Trigger: AACAGCATTGGTCCTGTGTCATCCATAAACATGCTC...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CCA 90 bp | CAAGTCTGTACTGAGTGCAAGGGCAAGAGCCTGTCAAGAAAACAAGTAAAAATGGCCAAGACCCACTTCTaGTTTGATGGGGAGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: QVCTECKGKSLSRKQVKMAKTHF*FDGESS Trigger: TGAAGACTCCCCATCAAACCAGAAGTGGGTCTTGGC...CATTTTTACTTGTTTTCTTGACAGGCTCTTGCCCTTGCACTCAGTACAGACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR CAA 72 bp | TGTCTAGATATTGGTTTGCATCTTTCACAGGGGTCGTaGCATGATAACTGGCAGCTTCTGTATCCAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: CLDIGLHLSQGS*HDNWQLLYPRP Trigger: TGGCCTTGGATACAGAAGCTGCCAGTTATCATGCAACGACCCCTGTGAAAGATGCAAACCAATATCTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | CGCTTCCAAACAAAGGCCTATCCACATTGCATGTGTTaGCAGGGTGAAGACAGTTACCGAATCCCTAACATA | + |
Preference number: 4 (lower is better) Translates to: RFQTKAYPHCMC*QGEDSYRIPNI Trigger: TATGTTAGGGATTCGGTAACTGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AGTGCCAAGACCCTGCTAATGAGTGGAAATGTGTGGTaGTCACCAATAGAGGATGCTTCAAAAGAGTCATGG | + |
Preference number: 4 (lower is better) Translates to: SAKTLLMSGNVW*SPIEDASKESW Trigger: CCATGACTCTTTTGAAGCATCCTCTATTGGTGACAACCACACATTTCCACTCATTAGCAGGGTCTTGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AAGCAGACTCATTCACACATTAAGAACTCAGCCTGTTaGAGGAGAAAATCAGAAGGTGGACCCATGTCACCC | + |
Preference number: 4 (lower is better) Translates to: KQTHSHIKNSAC*RRKSEGGPMSP Trigger: GGGTGACATGGGTCCACCTTCTGATTTTCTCCTCAAACAGGCTGAGTTCTTAATGTGTGAATGAGTCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | CCTCATCATCTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTTGAAAAATGGTGTGGTGATCCAGTaGGCCTCCGCTGTTTTAGAA | + |
Preference number: 4 (lower is better) Translates to: PHHLRLRLGLINRSSLKNGVVIQ*ASAVLE Trigger: TTCTAAAACAGCGGAGGCTCACTGGATCACCACACC...ATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAGATGATGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGCACATCGATCACAGTTaGTTTTATTCCAATGTCCGG | + |
Preference number: 4 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMHIDHS*FYSNVR Trigger: CCGGACATTGGAATAAAACCAACTGTGATCGATGTG...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CCA 90 bp | TTTCCTAGCCCTTTGGATAGAGTGGACCTCTGCTTCCTAGCTGTGTCAAGACAACAGGAATCCATCTTGTaGAATCTGGATGTAATAACG | + |
Preference number: 4 (lower is better) Translates to: FPSPLDRVDLCFLAVSRQQESIL*NLDVIT Trigger: CGTTATTACATCCAGATTCCACAAGATGGATTCCTG...TTGTCTTGACACAGCTAGGAAGCAGAGGTCCACTCTATCCAAAGGGCTAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AATGGGGAGGATCTGAGACAATGTCTAGATATTGGTTaGCATCTTTCACAGGGGTCGTTGCATGATAACTGG | + |
Preference number: 4 (lower is better) Translates to: NGEDLRQCLDIG*HLSQGSLHDNW Trigger: CCAGTTATCATGCAACGACCCCTGTGAAAGATGCAAACCAATATCTAGACATTGTCTCAGATCCTCCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | ATTAATTCAGCTTTGTGGGATAAAAGCACACCAGGATaGTACTGTGGATGCCATAACAGTGCCAAGACCCTG | + |
Preference number: 4 (lower is better) Translates to: INSALWDKSTPG*YCGCHNSAKTL Trigger: CAGGGTCTTGGCACTGTTATGGCATCCACAGTACAATCCTGGTGTGCTTTTATCCCACAAAGCTGAATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR TCA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGAATGGACTTCTTTGCTaGGCATGTTTATGGATGACA | + |
Preference number: 4 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMNGLLC*ACLWMT Trigger: TGTCATCCATAAACATGCTCAGCAAAGAAGTCCATT...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR TCA 90 bp | AACCAGGAAATAAATACTGGGTGGCATGCATTCCTCAAATGCTGGGAAACTCTGTTCCATGTTTATGGATaGCACAGGACCAATGCTGTT | + |
Preference number: 4 (lower is better) Translates to: NQEINTGWHAFLKCWETLFHVYG*HRTNAV Trigger: AACAGCATTGGTCCTGTGTCATCCATAAACATGGAA...CAGAGTTTCCCAGCATTTGAGGAATGCATGCCACCCAGTATTTATTTCCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | ATCTTTCCAGAAGATTCCTGTGAACCGGGGCATAACTTGATGTTTAAGAAAATGGGGAAGTTATGCAGTTaGAGCTGGCACTCTGCATTG | + |
Preference number: 4 (lower is better) Translates to: IFPEDSCEPGHNLMFKKMGKLCS*SWHSAL Trigger: CAATGCAGAGTGCCAGCTGCAACTGCATAACTTCCC...CATTTTCTTAAACATCAAGTTATGCCCCGGTTCACAGGAATCTTCTGGAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CCA 90 bp | CCTCATCATCTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTTGAAAAATGCCAAGACCCACTTCTaGTTTGATGGGGAGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: PHHLRLRLGLINRSSLKNAKTHF*FDGESS Trigger: TGAAGACTCCCCATCAAACCAGAAGTGGGTCTTGGC...ATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAGATGATGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | GATTCACCTCTGGTTGTCTCTTCTCTATTTCCCCCATaGATCATCTCTCATCCTAAGCTATGTATGCAGATG | + |
Preference number: 4 (lower is better) Translates to: DSPLVVSSLFPP*IISHPKLCMQM Trigger: CATCTGCATACATAGCTTAGGATGAGAGATGATCAATGGGGGAAATAGAGAAGAGACAACCAGAGGTGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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3UTR CAA 72 bp | CTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTaGAAAAATGCTGGATTCAAATGCAACTGGTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LRLRLGLINRSS*KNAGFKCNWSR Trigger: CCTGGACCAGTTGCATTTGAATCCAGCATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | CTATGGGTTGAAGAAGGGATTAGCAAGAATATCACTTaGAAGATGCAGTTCCTCTTTGTGTGTGTGTGTGTG | + |
Preference number: 4 (lower is better) Translates to: LWVEEGISKNIT*KMQFLFVCVCV Trigger: CACACACACACACACAAAGAGGAACTGCATCTTCAAAGTGATATTCTTGCTAATCCCTTCTTCAACCCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AAAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTTGTaGAAAGTCAATTGTTTCTCCCTACCCTTTCAGCTT | + |
Preference number: 4 (lower is better) Translates to: KAGTSSVWEVLL*KVNCFSLPFQL Trigger: AAGCTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTTGTaGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: NKAGTSSVWEVL*LKVNCFSLPFQ Trigger: CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR GCA 90 bp | TCAGTTTGGGAGGTTTTGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTTCAGAGCATACTCCATCAGTaGGGCAAAGACAAACAAGAA | + |
Preference number: 4 (lower is better) Translates to: SVWEVLLLKVNCFSLPFQSILHQ*GKDKQE Trigger: TTCTTGTTTGTCTTTGCCGCACTGATGGAGTATGCT...CTGAAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | CAAAACAAAGCAGGAACTAGCTCAGTTTGGGAGGTTTaGTTGTTGAAAGTCAATTGTTTCTCCCTACCCTTT | + |
Preference number: 4 (lower is better) Translates to: QNKAGTSSVWEV*LLKVNCFSLPF Trigger: AAAGGGTAGGGAGAAACAATTGACTTTCAACAACAAAACCTCCCAAACTGAGCTAGTTCCTGCTTTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | ACCAATTCTACAATGGGAAGACTTCTAAAATATGTCTaGAGAATCTTTCCAGAAGATTCCTGTGAACCGGGG | + |
Preference number: 4 (lower is better) Translates to: TNSTMGRLLKYV*RIFPEDSCEPG Trigger: CCCCGGTTCACAGGAATCTTCTGGAAAGATTCTCAAGACATATTTTAGAAGTCTTCCCATTGTAGAATTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | CCATCACCAATTTTGGGATCTAAAGTTGGTTTGGCTTaGAAGTTAATGCTCATGATTAAATACATGGATGTT | + |
Preference number: 4 (lower is better) Translates to: PSPILGSKVGLA*KLMLMIKYMDV Trigger: AACATCCATGTATTTAATCATGAGCATTAACTTCAAAGCCAAACCAACTTTAGATCCCAAAATTGGTGATGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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3UTR CAA 72 bp | AGATACAGAATACATGGATCCAGAAGCCGACTGTACTaGTTCAGAGAAATACAGAGAAGTATCTTTAAATAT | + |
Preference number: 4 (lower is better) Translates to: RYRIHGSRSRLY*FREIQRSIFKY Trigger: ATATTTAAAGATACTTCTCTGTATTTCTCTGAACAAGTACAGTCGGCTTCTGGATCCATGTATTCTGTATCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS GCA 90 bp | GGGGAGTCTTCATTCTCATCTTCTTCTACCCTCCTGGACCGAGCATaGAAGCCCGAGAACAGGCAGAGGAGAAGCAGCAGCTTTGCAGCC | + |
Preference number: 5 (lower is better) Translates to: GESSFSSSSTLLDRA*KPENRQRRSSSFAA Trigger: GGCTGCAAAGCTGCTGCTTCTCCTCTGCCTGTTCTCGGGCTTGCATGCTCGGTCCAGGAGGGTAGAAGAAGATGAGAATGAAGACTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS GCA 90 bp | AGAAGACCCGAGAGTAGGAGTCCAGCTCAGAGACATCAATGTGGATaGGGCCTCTCCTCCAGGAGCCAGACTTGCACTCCTCATAGCAGC | + |
Preference number: 5 (lower is better) Translates to: RRPESRSPAQRHQCG*GLSSRSQTCTPHSS Trigger: GCTGCTATGAGGAGTGCAAGTCTGGCTCCTGGAGGAGAGGCCGCATCCACATTGATGTCTCTGAGCTGGACTCCTACTCTCGGGTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS GCA 90 bp | CAGAGACATCAATGTGGATGCGGCCTCTCCTCCAGGAGCCAGACTTaGACTCCTCATAGCAGCAGAAGAAGCTCTGGCAGTCTTTGCCAT | + |
Preference number: 5 (lower is better) Translates to: QRHQCGCGLSSRSQT*TPHSSRRSSGSLCH Trigger: ATGGCAAAGACTGCCAGAGCTTCTTCTGCTGCTATGAGGAGTGCAAGTCTGGCTCCTGGAGGAGAGGCCGCATCCACATTGATGTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | GGAATCCAAATACAAATACAGAGGGCGGCCCAGCCACAAGGCTCAGGTGGCTTCTCGGTGTCTTGTGATTaGGGTGCCAAGACCCACTTC | + |
Preference number: 5 (lower is better) Translates to: GIQIQIQRAAQPQGSGGFSVSCD*GAKTHF Trigger: GAAGTGGGTCTTGGCACCCAAATCACAAGACACCGA...GAAGCCACCTGAGCCTTGTGGCTGGGCCGCCCTCTGTATTTGTATTTGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGATCTCTCAACAATTTGTaGAGAATCAGCGTTACATCG | + |
Preference number: 5 (lower is better) Translates to: VAKARWAQGRPLFTRTPRSLNNL*RISVTS Trigger: CGATGTAACGCTGATTCTCAACAAATTGTTGAGAGA...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | GTCGCCAAGGCACGTTGGGCACAAGGGCGCCCTCTCTTCACTAGGACACCACGAGATCAGGAATCCATCTaGTGGAATCTGGATGTAATA | + |
Preference number: 5 (lower is better) Translates to: VAKARWAQGRPLFTRTPRDQESI*WNLDVI Trigger: TATTACATCCAGATTCCACAAGATGGATTCCTGATC...TCGTGGTGTCCTAGTGAAGAGAGGGCGCCCTTGTGCCCAACGTGCCTTGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | GCACTCTTTAGAGCAGGGACACAGTCTCAGCCCCAGGTTGCTTTCTACAGTAGGAAGAGTGAGGTTCCATaGCACTTGGTGAATCTCGAA | + |
Preference number: 5 (lower is better) Translates to: ALFRAGTQSQPQVAFYSRKSEVP*HLVNLE Trigger: TTCGAGATTCACCAAGTGCAATGGAACCTCACTCTT...CCTACTGTAGAAAGCAACCTGGGGCTGAGACTGTGTCCCTGCTCTAAAGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CAA 90 bp | GCCGCTTCCAAACAAAGGCCTATCCACATTGCATGTGTTTGCAGGGTGAAGACAAGGGAAGTTATGCAGTaGCAGCTGGCACTCTGCATT | + |
Preference number: 5 (lower is better) Translates to: AASKQRPIHIACVCRVKTREVMQ*QLALCI Trigger: AATGCAGAGTGCCAGCTGCAACTGCATAACTTCCCT...TGTCTTCACCCTGCAAACACATGCAATGTGGATAGGCCTTTGTTTGGAAGCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS CCA 90 bp | AGCGTTACATCGGTGTCTTGTGATTTGGGTGCCAAGACCCACTTCTaGTTTGATGGGGAGTCTTCATTCTCATCTTCTTCTACCCTCCTG | + |
Preference number: 5 (lower is better) Translates to: SVTSVSCDLGAKTHF*FDGESSFSSSSTLL Trigger: CAGGAGGGTAGAAGAAGATGAGAATGAAGACTCCCCATCAAACCAGAAGTGGGTCTTGGCACCCAAATCACAAGACACCGATGTAACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | CAGACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAAGCTGGCACTCTGCATaGATAGTGAGCCTTAATGTG | + |
Preference number: 5 (lower is better) Translates to: QTTTQAIPQIFTRRKQSRSWHSA*IVSLNV Trigger: CACATTAAGGCTCACTATCAATGCAGAGTGCCAGCT...TCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | CAAGTCTGTACTGAGTGCAAGGGCAAGAGCCTGTCAAGAAAACAAGTAAAAATGTCGGTGTCTTGTGATTaGGGTGCCAAGACCCACTTC | + |
Preference number: 5 (lower is better) Translates to: QVCTECKGKSLSRKQVKMSVSCD*GAKTHF Trigger: GAAGTGGGTCTTGGCACCCAAATCACAAGACACCGA...CATTTTTACTTGTTTTCTTGACAGGCTCTTGCCCTTGCACTCAGTACAGACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CAA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATTGCCTAATGTTGTTCTaGCTGGTGTCGCATCCTTTT | + |
Preference number: 5 (lower is better) Translates to: DHHPSNSPDLHTKETKQNCLMLF*LVSHPF Trigger: AAAAGGATGCGACACCAGCAAGAACAACATTAGGCA...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | GACCACCACCCAAGCAATTCCCCAGATCTTCACACGAAGGAAACAAAGCAGAATTGCCAGTACATGGAATaGTTTAACGTGATCATCACA | + |
Preference number: 5 (lower is better) Translates to: DHHPSNSPDLHTKETKQNCQYME*FNVIIT Trigger: TGTGATGATCACGTTAAACAATTCCATGTACTGGCA...ATTCTGCTTTGTTTCCTTCGTGTGAAGATCTGGGGAATTGCTTGGGTGGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGTCTCTCAACAATTTGTaGAGAATCAGCGTTACATCG | + |
Preference number: 5 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMSLNNL*RISVTS Trigger: CGATGTAACGCTGATTCTCAACAAATTGTTGAGAGA...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CAA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGTCCGGTCTCAGCTTTTaGTCATATTCTCTCAACAAT | + |
Preference number: 5 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMSGLSF*SYSLNN Trigger: ATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGA...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS TCA 90 bp | CAATGTCCGGTCTCAGCTTTTTGTCATATTCTCTCAACAATTTGTTaGGAATCAGCGTTACATCGGTGTCTTGTGATTTGGGTGCCAAGA | + |
Preference number: 5 (lower is better) Translates to: QCPVSAFCHILSTIC*ESALHRCLVIWVPR Trigger: TCTTGGCACCCAAATCACAAGACACCGATGTAACGCTGATTCTCAACAAATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGACATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | TGCTTGTCTGTCAGGTCCTGTGTCTTTGTGGATAGTAGCAGCCTGATCATAATGGATTCAGTGTCAGGTTaGAAGCAATGTCCATATAAT | + |
Preference number: 5 (lower is better) Translates to: CLSVRSCVFVDSSSLIIMDSVSG*KQCPYN Trigger: ATTATATGGACATTGCTTCAAACCTGACACTGAATC...CATTATGATCAGGCTGCTACTATCCACAAAGACACAGGACCTGACAGACAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS-3UTR CAA 90 bp | CATCTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTTGAAAAATGCTGGAATTTTCATTGTGCTGTaGAATCGAAGGCGACTGTCT | + |
Preference number: 5 (lower is better) Translates to: HLRLRLGLINRSSLKNAGIFIVL*NRRRLS Trigger: AGACAGTCGCCTTCGATTCAACAGCACAATGAAAAT...TCCAGCATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS-3UTR CAA 90 bp | CCTCATCATCTGAGACTGAGACTTGGTCTTATAAATCGCAGCTCTTTGAAAAATATCAAGCCCACCATGTaGCTGTTCAGAGTTAGTATT | + |
Preference number: 5 (lower is better) Translates to: PHHLRLRLGLINRSSLKNIKPTM*LFRVSI Trigger: AATACTAACTCTGAACAGCAACATGGTGGGCTTGAT...ATTTTTCAAAGAGCTGCGATTTATAAGACCAAGTCTCAGTCTCAGATGATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS GCA 72 bp | TCATTCTCATCTTCTTCTACCCTCCTGGACCGAGCATaGAAGCCCGAGAACAGGCAGAGGAGAAGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: SFSSSSTLLDRA*KPENRQRRSSS Trigger: GCTGCTGCTTCTCCTCTGCCTGTTCTCGGGCTTGCATGCTCGGTCCAGGAGGGTAGAAGAAGATGAGAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS CAA 72 bp | ACACAGGTGTCCTCAAATTCCTGCCAGTACATGGAATaGTTTAACGTGATCATCACAGGTGGTGGGGGCCTC | + |
Preference number: 6 (lower is better) Translates to: TQVSSNSCQYME*FNVIITGGGGL Trigger: GAGGCCCCCACCACCTGTGATGATCACGTTAAACAATTCCATGTACTGGCAGGAATTTGAGGACACCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068911.13 |
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CDS CAA 90 bp | CCAATGTCCGGTCTCAGCTTTTTGTCATATTCTCTCAACAATTTGTaGAGAATCAGCGTTACATCGGTGTCTTGTGATTTGGGTGCCAAG | + |
Preference number: 6 (lower is better) Translates to: PMSGLSFLSYSLNNL*RISVTSVSCDLGAK Trigger: CTTGGCACCCAAATCACAAGACACCGATGTAACGCTGATTCTCAACAAATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGACATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS CAA 90 bp | ATTCCAATGTCCGGTCTCAGCTTTTTGTCATATTCTCTCAACAATTaGTTGAGAATCAGCGTTACATCGGTGTCTTGTGATTTGGGTGCC | + |
Preference number: 6 (lower is better) Translates to: IPMSGLSFLSYSLNN*LRISVTSVSCDLGA Trigger: GGCACCCAAATCACAAGACACCGATGTAACGCTGATTCTCAACAAATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGACATTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |
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CDS CAA 90 bp | TCTAAGAAGAGTGAGGTTCCATTGCACTTGGTGAATCTCGAAGTCTaGGATGAAATGGGATTCAGTGTCAGGTTTGAAGCAATGTCCATA | + |
Preference number: 6 (lower is better) Translates to: SKKSEVPLHLVNLEV*DEMGFSVRFEAMSI Trigger: TATGGACATTGCTTCAAACCTGACACTGAATCCCATTTCATCCAAGACTTCGAGATTCACCAAGTGCAATGGAACCTCACTCTTCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068394.7 |
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CDS CAA 72 bp | TCCGGTCTCAGCTTTTTGTCATATTCTCTCAACAATTaGTTGAGAATCAGCGTTACATCGGTGTCTTGTGAT | + |
Preference number: 6 (lower is better) Translates to: SGLSFLSYSLNN*LRISVTSVSCD Trigger: ATCACAAGACACCGATGTAACGCTGATTCTCAACAAATTGTTGAGAGAATATGACAAAAAGCTGAGACCGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068394.7 ENSMUST00000068911.13 |