Pregenerated sensors for GABRG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020436Ensembl transcript IDs: ENSMUST00000070725.11, ENSMUST00000070735.10, ENSMUST00000109290.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTACTGTCACGGGGACTCCTGTGACAGAGACATTAGGCCCAGGTaGGTAAGTGAATATCTACATGCTGTCCTCAACACTCCCAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: FYCHGDSCDRDIRPR*VSEYLHAVLNTPSK Trigger: TTTACTGGGAGTGTTGAGGACAGCATGTAGATATTCACTTACCCACCTGGGCCTAATGTCTCTGTCACAGGAGTCCCCGTGACAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR TCA 90 bp | GTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCACGCTaGAATTCAAATTACAATAACCACGGATTGGGCATGGATAGTATG | + |
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Preference number: 1 (lower is better) Translates to: VLTLLCLAGLKDSAR*NSNYNNHGLGMDSM Trigger: CATACTATCCATGCCCAATCCGTGGTTATTGTAATTTGAATTTCAGCGTGCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR GCA 90 bp | GTACATTGTTTCCAAGCATACTGTATACCAGTCAGGTATGAATATTaGTCATACTTTCATAGGTTCACAAGCAGAATTTTCACCAGACAT | + |
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Preference number: 1 (lower is better) Translates to: VHCFQAYCIPVRYEY*SYFHRFTSRIFTRH Trigger: ATGTCTGGTGAAAATTCTGCTTGTGAACCTATGAAAGTATGAGCAATATTCATACCTGACTGGTATACAGTATGCTTGGAAACAATGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR CCA 90 bp | GAACATACAGGGAAAAGAAGGACCACATACAGTACGGTCAATATTTaGGACATTAAAATCGAGCATTTCCTTTATTCATTAACCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: EHTGKRRTTYSTVNI*DIKIEHFLYSLTSK Trigger: CTTACTGGTTAATGAATAAAGGAAATGCTCGATTTTAATGTCCCAAATATTGACCGTACTGTATGTGGTCCTTCTTTTCCCTGTATGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR CAA 90 bp | GTGACACAGCTGATAAGGGGAGCCAGGAAGCTTTTGCTAAAGGGCTaGAGCCTTCACCTAGAAGCCTGCCTGTCTCCCAACCTCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: VTQLIRGARKLLLKG*SLHLEACLSPNLIP Trigger: TGGGATGAGGTTGGGAGACAGGCAGGCTTCTAGGTGAAGGCTCAAGCCCTTTAGCAAAAGCTTCCTGGCTCCCCTTATCAGCTGTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCCTTCACCTAGAAGCCTGCCTGTCTCCCAACCTCATCCCAACTGAGTATTGGAGCTGTAGAGACTaGAGAACATACAGGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSLHLEACLSPNLIPTEYWSCRD*RTYREK Trigger: CTTTTCCCTGTATGTTCTTCAGTCTCTACAGCTCCA...ATACTCAGTTGGGATGAGGTTGGGAGACAGGCAGGCTTCTAGGTGAAGGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCTGCCTGTCTCCCAACCTCATCCCAACTGAGTATCAGCACAGCCATCTTCCACCAAGTCTTACTTaGAAACAAATGTGTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: EACLSPNLIPTEYQHSHLPPSLT*KQMCHL Trigger: CAGATGACACATTTGTTTGCAAGTAAGACTTGGTGG...AAGATGGCTGTGCTGATACTCAGTTGGGATGAGGTTGGGAGACAGGCAGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR CAA 90 bp | AGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATATTTATaGAGCACTGACTATATGCCAGGCACAGTGCAAGATGTTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SYSPDKSMHCSQPYL*STDYMPGTVQDVEK Trigger: CTTCTCAACATCTTGCACTGTGCCTGGCATATAGTCAGTGCTCAATAAATATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR TCA 90 bp | GTTTACCACAACTTGATCCCAAGTGAACATAGTACACAGCTTTATACCTTTTGTTTTGCCTTGCAGGTTTaGAGGACAGTGCACGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VYHNLIPSEHSTQLYTFCFALQV*RTVHAE Trigger: TTCAGCGTGCACTGTCCTTCAAACCTGCAAGGCAAA...ACAAAAGGTATAAAGCTGTGTACTATGTTCACTTGGGATCAAGTTGTGGTAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTCTCTGTAGCAATTTCTACACTGAAGTGACACAGCTGATAAGGGGAGCCCCCTACACATGTGTGTaGACACACTTTAAGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: FCLCSNFYTEVTQLIRGAPYTCV*THFKLF Trigger: AAATAACTTAAAGTGTGTGCACACACATGTGTAGGG...GGCTCCCCTTATCAGCTGTGTCACTTCAGTGTAGAAATTGCTACAGAGACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTTAAACCCTCCCAGCTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCAAGGACAGTGCACGCTaGAATTCAAATTACAATAAC | + |
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Preference number: 2 (lower is better) Translates to: HFKPSQLPLFSLLLLKGIKDSAR*NSNYNN Trigger: GTTATTGTAATTTGAATTTCAGCGTGCACTGTCCTT...GATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR CAA 90 bp | CAAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTaGCCTTGCAGGTTTGAAGGACAGTGCACGCTGAAATTCAAATTA | + |
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Preference number: 2 (lower is better) Translates to: QRYLAQCNSSCSNFT*PCRFEGQCTLKFKL Trigger: TAATTTGAATTTCAGCGTGCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGAACTTTACTTTGCCTTaGAGGTTTGAAGGACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: KVQLIMTEVSQSLHLITMNFTLP*RFEGQC Trigger: GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTT...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR GCA 90 bp | CACATTAAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTAAACAACAAGAACTCTaGCTACAAGGCGTTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: HIKVQLIMTEVSQSLHLIKQQEL*LQGVHS Trigger: ACTGTGAACGCCTTGTAGGCAGAGTTCTTGTTGTTT...AATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTTAATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGATGTCAATCAAGAAGGTAAAACCATTACTCCTGTCAGCCTCTCAAAAGGAACACATATGCATATCTaGATATTCTTTACCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: KDVNQEGKTITPVSLSKGTHMHI*IFFTLH Trigger: GTGGAGGGTAAAGAATATTCAGATATGCATATGTGT...TCCTTTTGAGAGGCTGACAGGAGTAATGGTTTTACCTTCTTGATTGACATCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGCACAGTGCAAGATGTTaGGAAGTAAAAGAAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: KVQLIMTEVSQSLHLITMHSARC*EVKEET Trigger: TGTTTCTTCTTTTACTTCTCAACATCTTGCACTGTG...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR GCA 90 bp | GTTTACCACAACTTGATCCCAAGTGAACATAGTACACAGCTTTATACCTTTTGTGTTCTAACTTTACTTTaGCTTGCAGGTTTGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VYHNLIPSEHSTQLYTFCVLTLL*LAGLKD Trigger: GTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAAC...ACAAAAGGTATAAAGCTGTGTACTATGTTCACTTGGGATCAAGTTGTGGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR-3UTR GCA 90 bp | AAACATAAACCACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATTTCCACTGTTTTCATTaGTGTTGCTCAAAGGTATCT | + |
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Preference number: 2 (lower is better) Translates to: KHKPLVLGQKKLFTRQEYFHCFH*CCSKVS Trigger: AGATACCTTTGAGCAACAGCAATGAAAACAGTGGAA...ATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTGGTTTATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGGTCAGTCAGCCTAAATaGTACTTAAGGTGTTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: KVQLIMTEVSQSLHLITMVSQPK*YLRCFN Trigger: ATTAAAACACCTTAAGTACCATTTAGGCTGACTGAC...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR CAA 90 bp | GAGCATTTCCTTTATTCATTAACCAGTAAGAAGAATGGTGCTATTTaGTTTACCATCCACCAAGTCTTACTTGCAAACAAATGTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: EHFLYSLTSKKNGAI*FTIHQVLLANKCVI Trigger: GATGACACATTTGTTTGCAAGTAAGACTTGGTGGATGGTAAACAAAATAGCACCATTCTTCTTACTGGTTAATGAATAAAGGAAATGCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR CCA 72 bp | CACGGGGACTCCTGTGACAGAGACATTAGGCCCAGGTaGGTAAGTGAATATCTACATGCTGTCCTCAACACT | + |
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Preference number: 3 (lower is better) Translates to: HGDSCDRDIRPR*VSEYLHAVLNT Trigger: AGTGTTGAGGACAGCATGTAGATATTCACTTACCCACCTGGGCCTAATGTCTCTGTCACAGGAGTCCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR TCA 72 bp | CAGCCAATCACTCCATTTAATTACTATGGAGCAAAATaGGCCCACAGTCAGAGGCTCCATGTCCTCCATGCA | + |
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Preference number: 3 (lower is better) Translates to: QPITPFNYYGAK*AHSQRLHVLHA Trigger: TGCATGGAGGACATGGAGCCTCTGACTGTGGGCTCATTTTGCTCCATAGTAATTAAATGGAGTGATTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR TCA 72 bp | CAACCCCTCAATTTATGGTCAGATAGGTACCCACTGTaGTGTTGCTCATGCCTCTCAGAGCAGAAAACAAGG | + |
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Preference number: 3 (lower is better) Translates to: QPLNLWSDRYPL*CCSCLSEQKTR Trigger: CCTTGTTTTCTGCTCTGAGAGGCATGAGCAACATCACAGTGGGTACCTATCTGACCATAAATTGAGGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTAGCAATTTCTACACTGAAGTGACACAGCTGATAAGGGGAGCCAGGAAGAAGAATGGTGCTATTTaGTTTACCATCCACCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LCSNFYTEVTQLIRGARKKNGAI*FTIHQV Trigger: GACTTGGTGGATGGTAAACAAAATAGCACCATTCTT...CTTCCTGGCTCCCCTTATCAGCTGTGTCACTTCAGTGTAGAAATTGCTACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTGTCTCTGTAGCAATTTCTACACTGAAGTGACACAGCTGATAAGGGGAGCCGCACAGCCATCTTATTaGAGGGAAAATGACTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: FCLCSNFYTEVTQLIRGAAQPSY*RENDLG Trigger: TCCTAAGTCATTTTCCCTCAAATAAGATGGCTGTGC...GGCTCCCCTTATCAGCTGTGTCACTTCAGTGTAGAAATTGCTACAGAGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGGTACCCACTGTGATGTTGCTCATGCCTCTCAGAGCAGAAAACAAGGGAAGAAAAATAAAATCAGGTaGTCAACTTCCATCGCCATC | + |
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Preference number: 3 (lower is better) Translates to: IGTHCDVAHASQSRKQGKKNKIR*STSIAI Trigger: GATGGCGATGGAAGTTGACAACCTGATTTTATTTTT...CTTCCCTTGTTTTCTGCTCTGAGAGGCATGAGCAACATCACAGTGGGTACCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| 3UTR GCA 72 bp | CAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTaGAGGTTTGAAGGACAGTGCACGCTGAAATTCAAA | + |
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Preference number: 3 (lower is better) Translates to: QCNSSCSNFTLP*RFEGQCTLKFK Trigger: TTTGAATTTCAGCGTGCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| 3UTR-3UTR CAA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGAGAGAGCAAGTTCTGTaGAGAACGCACATCGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: KVQLIMTEVSQSLHLITMREQVL*RTHIVK Trigger: TTTGACGATGTGCGTTCTCAACAGAACTTGCTCTCT...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR GCA 72 bp | GTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTaGTCCCAGCCATATTTATTGAGCACTGACTATATG | + |
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Preference number: 3 (lower is better) Translates to: VRRSYSPDKSMH*SQPYLLSTDYM Trigger: CATATAGTCAGTGCTCAATAAATATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR GCA 72 bp | AAAATGAGCCCACAGTCAGAGGCTCCATGTCCTCCATaGAAGTCACTTAATATTGTTCCTGCTTTTAATTTA | + |
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Preference number: 3 (lower is better) Translates to: KMSPQSEAPCPP*KSLNIVPAFNL Trigger: TAAATTAAAAGCAGGAACAATATTAAGTGACTTGCATGGAGGACATGGAGCCTCTGACTGTGGGCTCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR-3UTR CAA 90 bp | CACATTAAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTATTCTAGTGATAAAGTaGGGCATATTTAGAGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: HIKVQLIMTEVSQSLHLIILVIK*GIFRAV Trigger: GACAGCTCTAAATATGCCCAACTTTATCACTAGAAT...AATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTTAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR GCA 72 bp | TTCCAAGCATACTGTATACCAGTCAGGTATGAATATTaGTCATACTTTCATAGGTTCACAAGCAGAATTTTC | + |
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Preference number: 3 (lower is better) Translates to: FQAYCIPVRYEY*SYFHRFTSRIF Trigger: GAAAATTCTGCTTGTGAACCTATGAAAGTATGAGCAATATTCATACCTGACTGGTATACAGTATGCTTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| 3UTR CAA 72 bp | CTGATAAGGGGAGCCAGGAAGCTTTTGCTAAAGGGCTaGAGCCTTCACCTAGAAGCCTGCCTGTCTCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LIRGARKLLLKG*SLHLEACLSPN Trigger: GTTGGGAGACAGGCAGGCTTCTAGGTGAAGGCTCAAGCCCTTTAGCAAAAGCTTCCTGGCTCCCCTTATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCTGCCTGTCTCCCAACCTCATCCCAACTGAGTATCAGCACAGCCATCTTGGAGTGGTGATCCAGTaGGCATCAGCCTTTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EACLSPNLIPTEYQHSHLGVVIQ*ASAFLE Trigger: CTCCAAAAAGGCTGATGCTCACTGGATCACCACTCC...AAGATGGCTGTGCTGATACTCAGTTGGGATGAGGTTGGGAGACAGGCAGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | TTGAGCCTTCACCTAGAAGCCTGCCTGTCTCCCAACCTCATCCCAACTGAGTATTCCTGTTGGGAGTGGTaGTCCAGTGAGCATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSLHLEACLSPNLIPTEYSCWEW*SSEHQP Trigger: AGGCTGATGCTCACTGGATCACCACTCCCAACAGGA...ATACTCAGTTGGGATGAGGTTGGGAGACAGGCAGGCTTCTAGGTGAAGGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCTGCCTGTCTCCCAACCTCATCCCAACTGAGTATCAGCACAGCCATCTTGTCTTTATCCTTGCTTaGCTTCCGGTTGCTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: EACLSPNLIPTEYQHSHLVFILA*LPVADK Trigger: TTTGTCAGCAACCGGAAGCCAAGCAAGGATAAAGAC...AAGATGGCTGTGCTGATACTCAGTTGGGATGAGGTTGGGAGACAGGCAGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGATAAGATTTTACTGTCACGGGGACTCCTGTGACAGAGACATTAGGCCCTACAGGAGAGTAGACTaGGCTTCCAATGCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: KEIRFYCHGDSCDRDIRPYRRVD*ASNAPC Trigger: ACATGGAGCATTGGAAGCTCAGTCTACTCTCCTGTA...GGGCCTAATGTCTCTGTCACAGGAGTCCCCGTGACAGTAAAATCTTATCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | GTGATGTTGCTCATGCCTCTCAGAGCAGAAAACAAGGGAAGGATGTCAATCAAGTTGGCTTCCGGTTGCTaGCAAAATAATGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VMLLMPLRAENKGRMSIKLASGC*QNNAGC Trigger: GCACCCTGCATTATTTTGTCAGCAACCGGAAGCCAA...CTTGATTGACATCCTTCCCTTGTTTTCTGCTCTGAGAGGCATGAGCAACATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR GCA 90 bp | AGCACTGAGCCTCAGTGTAGAGTTGAGCTAACCACATCAAACCCAACGACCTGTAGTAGCCCATTCTTCTaGTCAGATCGAAGTACACAG | + |
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Preference number: 4 (lower is better) Translates to: STEPQCRVELTTSNPTTCSSPFF*SDRSTQ Trigger: CTGTGTACTTCGATCTGAGCAGAAGAATGGGCTACT...ACAGGTCGTTGGGTTTGATGTGGTTAGCTCAACTCTACACTGAGGCTCAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR CCA 90 bp | TTTGCTAAAGGGCTTGAGCCTTCACCTAGAAGCCTGCCTGTCTCCCAACCTCATACCCTCTGGAACTTTTaGAGTCAACACCCATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: FAKGLEPSPRSLPVSQPHTLWNF*SQHPCF Trigger: AAAACATGGGTGTTGACTCCAAAAGTTCCAGAGGGT...ATGAGGTTGGGAGACAGGCAGGCTTCTAGGTGAAGGCTCAAGCCCTTTAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | CACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCTTGGCTTCCGGTTGCTaGCAAAATAATGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HLFWVRRSYSPDKSMHCSLASGC*QNNAGC Trigger: GCACCCTGCATTATTTTGTCAGCAACCGGAAGCCAA...GGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| CDS-3UTR TCA 90 bp | CACTTTAAACCCTCCCAGCTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGGCTTCCGGTTGCTaGCAAAATAATGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HFKPSQLPLFSLLLLKGILASGC*QNNAGC Trigger: GCACCCTGCATTATTTTGTCAGCAACCGGAAGCCAA...GATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| CDS-3UTR CCA 90 bp | AGCACTGAGCCTCAGTGTAGAGTTGAGCTAACCACATCAAACCCAACGACCTGTTGGGCAGAGATTTTCTaGCTATGGTGCTTAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: STEPQCRVELTTSNPTTCWAEIF*LWCLKL Trigger: CAACTTTAAGCACCATAGCCAGAAAATCTCTGCCCA...ACAGGTCGTTGGGTTTGATGTGGTTAGCTCAACTCTACACTGAGGCTCAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
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| CDS-3UTR TCA 90 bp | TGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCCTGACTTTTGGCTTGTaGAGCCTGGGTAGAGCGATA | + |
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Preference number: 4 (lower is better) Translates to: CNSSCSNFTLPCRFEGQCLTFGL*SLGRAI Trigger: TATCGCTCTACCCAGGCTTCACAAGCCAAAAGTCAG...GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| CDS-3UTR TCA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTTCCTGTTGGGAGTGGTaGTCCAGTGAGCATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFSCWEW*SSEHQP Trigger: AGGCTGATGCTCACTGGATCACCACTCCCAACAGGA...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| CDS-3UTR TCA 90 bp | TCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATGTGGCATTGTTCATTTaGATGGTTGCTGATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SGSEEVIHQTRVCIAPSHVALFI*MVADLG Trigger: TCCCAGATCAGCAACCATTCAAATGAACAATGCCAC...ATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
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| CDS-3UTR TCA 90 bp | CACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCTCTTCATCCCTCTCTTaGAGGTGTGTGGCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLFWVRRSYSPDKSMHCSSSSLS*RCVALF Trigger: GAACAATGCCACACACCTTCAAGAGAGGGATGAAGA...GGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR TCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTCTGACTTTTGGCTTGTaGAGCCTGGGTAGAGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSLTFGL*SLGRAI Trigger: TATCGCTCTACCCAGGCTTCACAAGCCAAAAGTCAG...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGTCTCTGTAGCAATTTCTACACTGAAGTGACACAGCTGATAAGGGGAGCCTTCATAGTCATCATCTaGCTTTTGGCTTGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLCSNFYTEVTQLIRGAFIVII*LLACEA Trigger: GGCTTCACAAGCCAAAAGTCAGATGATGACTATGAA...GGCTCCCCTTATCAGCTGTGTCACTTCAGTGTAGAAATTGCTACAGAGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGGAGTGGTGATCCAGTaGGCATCAGCCTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFGVVIQ*ASAFLE Trigger: CTCCAAAAAGGCTGATGCTCACTGGATCACCACTCC...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | AAACATAAACCACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATTCCTGTTGGGAGTGGTaGTCCAGTGAGCATCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KHKPLVLGQKKLFTRQEYSCWEW*SSEHQP Trigger: AGGCTGATGCTCACTGGATCACCACTCCCAACAGGA...ATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTGGTTTATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR GCA 90 bp | CACTTTAAACCCTCCCAGCTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCAGACTGAGCTTCCAATaGTCCATGTATTTGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFKPSQLPLFSLLLLKGIRLSFQ*SMYLAN Trigger: GTTCGCCAAATACATGGAGCATTGGAAGCTCAGTCT...GATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAGCAATTTCTACACTGAAGTGACACAGCTGATAAGGGGAGCCAGGAAGCCACTTCAACAGAACTaGGCTTCCATTGATAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSNFYTEVTQLIRGARKPLQQN*ASIDKQ Trigger: TTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGG...CTTCCTGGCTCCCCTTATCAGCTGTGTCACTTCAGTGTAGAAATTGCTACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR GCA 90 bp | CCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACAGCTCTTAACTGGCACAGTCCTTaGCATCCAAACACTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLFSLLLLKGILLSVTALNWHSP*HPNTHS Trigger: GCTATGAGTGTTTGGATGGCAAGGACTGTGCCAGTT...AAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATAACCCTCTGGAACTTTTaGAGTCAACACCCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGQKKLFTRQEYALLPAITLWNF*SQHPCF Trigger: AAAACATGGGTGTTGACTCCAAAAGTTCCAGAGGGT...TATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CCA 90 bp | AGCACTGAGCCTCAGTGTAGAGTTGAGCTAACCACATCAAACCCAACGACCTGTTTGTGTAATTGCAACTaGCACTCAGCATCAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STEPQCRVELTTSNPTTCLCNCN*HSASIV Trigger: AACAATTGATGCTGAGTGCCAGTTGCAATTACACAA...ACAGGTCGTTGGGTTTGATGTGGTTAGCTCAACTCTACACTGAGGCTCAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGTACCCACTGTGATGTTGCTCATGCCTCTCAGAGCAGAAAACAAGGGAAGTTCCTAAAGATGTTCTaGCAGGAACAGCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IGTHCDVAHASQSRKQGKFLKMF*QEQHPY Trigger: ATAAGGATGCTGTTCCTGCCAGAACATCTTTAGGAA...CTTCCCTTGTTTTCTGCTCTGAGAGGCATGAGCAACATCACAGTGGGTACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATATGGGCAGAGATTTTCTaGCTATGGTGCTTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQKKLFTRQEYALLPAIWAEIF*LWCLKL Trigger: CAACTTTAAGCACCATAGCCAGAAAATCTCTGCCCA...TATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| 3UTR CAA 72 bp | TGCCACTTTAAACCCTCCCAGCTTCCACTGTTTTCATaGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: CHFKPSQLPLFS*LLLKGILLSVT Trigger: TGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTTACAGGAGAGTAGACTaGGCTTCCAATGCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSYRRVD*ASNAPC Trigger: ACATGGAGCATTGGAAGCTCAGTCTACTCTCCTGTA...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGTACAGGAGAGTAGACTaGGCTTCCAATGCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLSVTALVLTLLCLAGLYRRVD*ASNAPC Trigger: ACATGGAGCATTGGAAGCTCAGTCTACTCTCCTGTA...CAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | CCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACAGCTCTTCCTTTTTGGAGTTCCTaGAGAAAGTGTCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PLFSLLLLKGILLSVTALPFWSS*RKCLES Trigger: GGATTCCAGACACTTTCTTCAGGAACTCCAAAAAGG...AAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCGTGGCATTGTTCATTTaGATGGTTGCTGATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CNSSCSNFTLPCRFEGQCVALFI*MVADLG Trigger: TCCCAGATCAGCAACCATTCAAATGAACAATGCCAC...GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGTCTTCATCCCTCTCTTaGAGGTGTGTGGCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSVTALVLTLLCLAGLSSSLS*RCVALF Trigger: GAACAATGCCACACACCTTCAAGAGAGGGATGAAGA...CAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | ATAGGTACCCACTGTGATGTTGCTCATGCCTCTCAGAGCAGAAAACAAGGGAAGATTTTCTGGCTATGGTaGTTAAAGTTGTCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTHCDVAHASQSRKQGKIFWLW*LKLSWS Trigger: TGACCATGACAACTTTAAGCACCATAGCCAGAAAAT...CTTCCCTTGTTTTCTGCTCTGAGAGGCATGAGCAACATCACAGTGGGTACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCAGTGACATCACCCTCTaGAACTTTTGGAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CNSSCSNFTLPCRFEGQCSDITL*NFWSQH Trigger: GTGTTGACTCCAAAAGTTCCAGAGGGTGATGTCACT...GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATCATTGTTCATTTGAATaGTTGCTGATCTGGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGSEEVIHQTRVCIAPSHHCSFE*LLIWDE Trigger: TTCGTCCCAGATCAGCAACCATTCAAATGAACAATG...ATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTATCAATAGGAGTGGTGATCCAGTaGGCATCAGCCTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LESAFCLHKIQRITPLSIGVVIQ*ASAFLE Trigger: CTCCAAAAAGGCTGATGCTCACTGGATCACCACTCC...TATTGATAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | ATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGCAAAATAATGCAGGGTaGCATACTCCACCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSVTALVLTLLCLAGLQNNAG*HTPPKQ Trigger: CTGCTTTGGTGGAGTATGGCACCCTGCATTATTTTG...CAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | CACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCTTCCTAAAGATGTTCTaGCAGGAACAGCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLFWVRRSYSPDKSMHCSFLKMF*QEQHPY Trigger: ATAAGGATGCTGTTCCTGCCAGAACATCTTTAGGAA...GGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGTCTTTATCCTTGCTTaGCTTCCGGTTGCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSVFILA*LPVADK Trigger: TTTGTCAGCAACCGGAAGCCAAGCAAGGATAAAGAC...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TTGGACTTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTACCTTTTTGGAGTTCCTaGAGAAAGTGTCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLESAFCLHKIQRITPLPFWSS*RKCLES Trigger: GGATTCCAGACACTTTCTTCAGGAACTCCAAAAAGG...TAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAAGTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCCATTTGAATGGTTGCTaGTCTGGGACGAATATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CNSSCSNFTLPCRFEGQCHLNGC*SGTNIN Trigger: ATTGATATTCGTCCCAGATCAGCAACCATTCAAATG...GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGAGACTGAGCTTCCAATaGTCCATGTATTTGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVQLIMTEVSQSLHLITMRLSFQ*SMYLAN Trigger: GTTCGCCAAATACATGGAGCATTGGAAGCTCAGTCT...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR GCA 90 bp | GGTGCTATTTTGTTTACCATCCACCAAGTCTTACTTGCAAACAAATGTGTCATCAGACTGAGCTTCCAATaGTCCATGTATTTGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAILFTIHQVLLANKCVIRLSFQ*SMYLAN Trigger: GTTCGCCAAATACATGGAGCATTGGAAGCTCAGTCT...GATGACACATTTGTTTGCAAGTAAGACTTGGTGGATGGTAAACAAAATAGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGTTCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCATTTTCTGGCTATGGTaGTTAAAGTTGTCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLFWVRRSYSPDKSMHCSIFWLW*LKLSWS Trigger: TGACCATGACAACTTTAAGCACCATAGCCAGAAAAT...GGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGAACAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCACAAAATAATGCAGGGTaGCATACTCCACCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLAQNNAG*HTPPKQ Trigger: CTGCTTTGGTGGAGTATGGCACCCTGCATTATTTTG...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | GGTGCTATTTTGTTTACCATCCACCAAGTCTTACTTGCAAACAAATGTGTCATCCAAAATAATGCAGGGTaGCATACTCCACCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAILFTIHQVLLANKCVIQNNAG*HTPPKQ Trigger: CTGCTTTGGTGGAGTATGGCACCCTGCATTATTTTG...GATGACACATTTGTTTGCAAGTAAGACTTGGTGGATGGTAAACAAAATAGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTAAACCCTCCCAGCTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGTGTAATTGCAACTaGCACTCAGCATCAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFKPSQLPLFSLLLLKGILCNCN*HSASIV Trigger: AACAATTGATGCTGAGTGCCAGTTGCAATTACACAA...GATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTTGGGCAGAGATTTTCTaGCTATGGTGCTTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSWAEIF*LWCLKL Trigger: CAACTTTAAGCACCATAGCCAGAAAATCTCTGCCCA...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGTCTTTATCCTTGCTTaGCTTCCGGTTGCTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLAVFILA*LPVADK Trigger: TTTGTCAGCAACCGGAAGCCAAGCAAGGATAAAGAC...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACAGCTCTTTCTCTTGAAGGTGTGTaGCATTGTTCATTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFSLLLLKGILLSVTALSLEGV*HCSFEW Trigger: CCATTCAAATGAACAATGCCACACACCTTCAAGAGA...AAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTTTCATAGTCATCATCTaGCTTTTGGCTTGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFFIVII*LLACEA Trigger: GGCTTCACAAGCCAAAAGTCAGATGATGACTATGAA...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCATTCATAGTCATCATCTaGCTTTTGGCTTGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLAFIVII*LLACEA Trigger: GGCTTCACAAGCCAAAAGTCAGATGATGACTATGAA...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGCATTTGAATGGTTGCTaGTCTGGGACGAATATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLSVTALVLTLLCLAGLHLNGC*SGTNIN Trigger: ATTGATATTCGTCCCAGATCAGCAACCATTCAAATG...CAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTTTTTCCCCACCATATTaGTATTCAACCGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSFSPPY*YSTGEL Trigger: AAGTTCTCCGGTTGAATAGCAATATGGTGGGGAAAA...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | AAGGATGTCAATCAAGAAGGTAAAACCATTACTCCTGTCAGCCTCTCAAAAGGATTTTCCCCACCATATTaGTATTCAACCGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KDVNQEGKTITPVSLSKGFSPPY*YSTGEL Trigger: AAGTTCTCCGGTTGAATAGCAATATGGTGGGGAAAA...TCCTTTTGAGAGGCTGACAGGAGTAATGGTTTTACCTTCTTGATTGACATCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCATGCAAGTCACTTAATATTGTTCCTGCTTTTAATTTAACCTTCAGTACAAACTGGCACAGTCCTTaGCATCCAAACACTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPCKSLNIVPAFNLTFSTNWHSP*HPNTHS Trigger: GCTATGAGTGTTTGGATGGCAAGGACTGTGCCAGTT...TGTACTGAAGGTTAAATTAAAAGCAGGAACAATATTAAGTGACTTGCATGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CCA 90 bp | TTGGACTTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTAACCCTCTGGAACTTTTaGAGTCAACACCCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLESAFCLHKIQRITPLTLWNF*SQHPCF Trigger: AAAACATGGGTGTTGACTCCAAAAGTTCCAGAGGGT...TAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAAGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | GTTTACCACAACTTGATCCCAAGTGAACATAGTACACAGCTTTATACCTTTTGTAGTGACATCACCCTCTaGAACTTTTGGAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VYHNLIPSEHSTQLYTFCSDITL*NFWSQH Trigger: GTGTTGACTCCAAAAGTTCCAGAGGGTGATGTCACT...ACAAAAGGTATAAAGCTGTGTACTATGTTCACTTGGGATCAAGTTGTGGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACAGCTCTTTTGTGTAATTGCAACTaGCACTCAGCATCAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLFSLLLLKGILLSVTALLCNCN*HSASIV Trigger: AACAATTGATGCTGAGTGCCAGTTGCAATTACACAA...AAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTCATTGTTCATTTGAATaGTTGCTGATCTGGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVTALVLTLLCLAGLKDSHCSFE*LLIWDE Trigger: TTCGTCCCAGATCAGCAACCATTCAAATGAACAATG...ACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR TCA 90 bp | TGTCAAATTTCTTCAGTATTTCTAAGGTGCATCGGGATAAATGTCAGATGCAAACCTTTTTGGAGTTCCTaGAGAAAGTGTCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CQISSVFLRCIGINVRCKPFWSS*RKCLES Trigger: GGATTCCAGACACTTTCTTCAGGAACTCCAAAAAGG...TTTGCATCTGACATTTATCCCGATGCACCTTAGAAATACTGAAGAAATTTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR GCA 90 bp | TTGGACTTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTACATTCACTGGACCAATaGTGTTCACATACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLESAFCLHKIQRITPLHSLDQ*CSHTYL Trigger: CAGATATGTATGTGAACAGCATTGGTCCAGTGAATG...TAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAAGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCATTTTCCCCACCATATTaGTATTCAACCGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLAFSPPY*YSTGEL Trigger: AAGTTCTCCGGTTGAATAGCAATATGGTGGGGAAAA...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTCCACTTCAACAGAACTaGGCTTCCATTGATAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFPLQQN*ASIDKQ Trigger: TTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGG...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCACCACTTCAACAGAACTaGGCTTCCATTGATAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLAPLQQN*ASIDKQ Trigger: TTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGG...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTATCAATAAGTAGCCCATTCTTCTaGTCAGATCGAAGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LESAFCLHKIQRITPLSISSPFF*SDRSTQ Trigger: CTGTGTACTTCGATCTGAGCAGAAGAATGGGCTACT...TATTGATAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | TTGGACTTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTATTCCTAAAGATGTTCTaGCAGGAACAGCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDLESAFCLHKIQRITPLFLKMF*QEQHPY Trigger: ATAAGGATGCTGTTCCTGCCAGAACATCTTTAGGAA...TAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAAGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCATCTCTTGAAGGTGTGTaGCATTGTTCATTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KGILLSVTALVLTLLCLASLEGV*HCSFEW Trigger: CCATTCAAATGAACAATGCCACACACCTTCAAGAGA...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| 3UTR CAA 72 bp | CTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTaGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLFSLLLLKGI*LSVTALVLTLL Trigger: AAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | GTTTACCACAACTTGATCCCAAGTGAACATAGTACACAGCTTTATACCTTTTGTCATTCACTGGACCAATaGTGTTCACATACATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYHNLIPSEHSTQLYTFCHSLDQ*CSHTYL Trigger: CAGATATGTATGTGAACAGCATTGGTCCAGTGAATG...ACAAAAGGTATAAAGCTGTGTACTATGTTCACTTGGGATCAAGTTGTGGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR GCA 90 bp | GTTTACCACAACTTGATCCCAAGTGAACATAGTACACAGCTTTATACCTTTTGTATTTTCTGGCTATGGTaGTTAAAGTTGTCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYHNLIPSEHSTQLYTFCIFWLW*LKLSWS Trigger: TGACCATGACAACTTTAAGCACCATAGCCAGAAAAT...ACAAAAGGTATAAAGCTGTGTACTATGTTCACTTGGGATCAAGTTGTGGTAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| 3UTR CAA 72 bp | ATGGTGCTATTTTGTTTACCATCCACCAAGTCTTACTaGCAAACAAATGTGTCATCTGTCAAATTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVLFCLPSTKSY*QTNVSSVKFLQ Trigger: CTGAAGAAATTTGACAGATGACACATTTGTTTGCAAGTAAGACTTGGTGGATGGTAAACAAAATAGCACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGATAAGATTTTACTGTCACGGGGACTCCTGTGACAGAGACATTAGGCCCTCAGGTCGAAGTTTGTaGTCATACCCTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEIRFYCHGDSCDRDIRPSGRSL*SYPSSR Trigger: CCTGCTGGAAGGGTATGACAACAAACTTCGACCTGA...GGGCCTAATGTCTCTGTCACAGGAGTCCCCGTGACAGTAAAATCTTATCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGATAAGATTTTACTGTCACGGGGACTCCTGTGACAGAGACATTAGGCCCTCATCCATTGGGAAGTaGTGTAATTGCAACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KEIRFYCHGDSCDRDIRPSSIGK*CNCNWH Trigger: GTGCCAGTTGCAATTACACAACTTCCCAATGGATGA...GGGCCTAATGTCTCTGTCACAGGAGTCCCCGTGACAGTAAAATCTTATCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CAA 90 bp | AGCACTGAGCCTCAGTGTAGAGTTGAGCTAACCACATCAAACCCAACGACCTGTAGAACTGCGCTTCCATaGATAAACAATTTCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: STEPQCRVELTTSNPTTCRTALP*INNFFT Trigger: CGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCT...ACAGGTCGTTGGGTTTGATGTGGTTAGCTCAACTCTACACTGAGGCTCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS TCA 90 bp | ATCCCTCTCTTGAAGGTGTGTGGCATTGTTCATTTGAATGGTTGCTaGTCTGGGACGAATATCAATGGTAGGGGCAGGGTTTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPLLKVCGIVHLNGC*SGTNINGRGRVFLL Trigger: AAGAAGAAAAACCCTGCCCCTACCATTGATATTCGTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAAGAGAGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS TCA 90 bp | ATCCCTCTCTTGAAGGTGTGTGGCATTGTTCATTTGAATGGTTGCTaGTCTGGGACGAATATCAATGGTAGGGGCCTTGAAGGAAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: IPLLKVCGIVHLNGC*SGTNINGRGLEGKH Trigger: ATGTTTTCCTTCAAGGCCCCTACCATTGATATTCGTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAAGAGAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | TGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAAGGACAGTGCTCAATGGTAGGGGCCTaGAAGGAAAACATCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CNSSCSNFTLPCRFEGQCSMVGA*KENIRR Trigger: TCTTCGGATGTTTTCCTTCAAGGCCCCTACCATTGA...GCACTGTCCTTCAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | GAGCTGTCAAATGTCAGTCAGCCTAAATGGTACTTAAGGTGTTTTAATGTCGTATCAGGTCGAAGTTTGTaGTCATACCCTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELSNVSQPKWYLRCFNVVSGRSL*SYPSSR Trigger: CCTGCTGGAAGGGTATGACAACAAACTTCGACCTGA...TACGACATTAAAACACCTTAAGTACCATTTAGGCTGACTGACATTTGACAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCATCATGGAGCTCACAGCACTGAGCCTCAGTGTAGAGTTGAGCTAACCTCTTCACTACTTCAGTaGTATTCCTCAATCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SFHHGAHSTEPQCRVELTSSLLQ*YSSIQQ Trigger: TTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGA...GGTTAGCTCAACTCTACACTGAGGCTCAGTGCTGTGAGCTCCATGATGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTAAACCCTCCCAGCTTCCACTGTTTTCATTGCTGTTGCTCAAAGGTATCCATAGTCACCAGAAGTaGTCTTCACTACTTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFKPSQLPLFSLLLLKGIHSHQK*SSLLQL Trigger: CAACTGAAGTAGTGAAGACAACTTCTGGTGACTATG...GATACCTTTGAGCAACAGCAATGAAAACAGTGGAAGCTGGGAGGGTTTAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS CCA 90 bp | CCAAACACTCATAGCCATATTCTTCATCCCTCTCTTGAAGGTGTGTaGCATTGTTCATTTGAATGGTTGCTGATCTGGGACGAATATCAA | + |
|
Preference number: 5 (lower is better) Translates to: PNTHSHILHPSLEGV*HCSFEWLLIWDEYQ Trigger: TTGATATTCGTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAAGAGAGGGATGAAGAATATGGCTATGAGTGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | CCACTGTTTTCATTGCTGTTGCTCAAAGGTATCTTGCTCAGTGTAACAGCTCTTATTTTCCCCACCATATaGCTATTCAACCGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PLFSLLLLKGILLSVTALIFPTI*LFNRRT Trigger: AGTTCTCCGGTTGAATAGCAATATGGTGGGGAAAAT...AAGAGCTGTTACACTGAGCAAGATACCTTTGAGCAACAGCAATGAAAACAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTCAGAAGAAGTTATTCACCAGACAAGAGTATGCATTGCTCCCAGCCATTCTTCACTACTTCAGTaGTATTCCTCAATCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SGSEEVIHQTRVCIAPSHSSLLQ*YSSIQQ Trigger: TTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGA...ATGGCTGGGAGCAATGCATACTCTTGTCTGGTGAATAACTTCTTCTGACCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CAA 90 bp | GAAGAACATACAGGGAAAAGAAGGACCACATACAGTACGGTCAATATTTGGGACCATAGTCACCAGAAGTaGTCTTCACTACTTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EEHTGKRRTTYSTVNIWDHSHQK*SSLLQL Trigger: CAACTGAAGTAGTGAAGACAACTTCTGGTGACTATG...GTCCCAAATATTGACCGTACTGTATGTGGTCCTTCTTTTCCCTGTATGTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109290.2 |
||
| CDS TCA 90 bp | AGTTGTATTCCTCAATCCAACAAAGGAAAATTGATACAGCCTCCATaGTCTTGTGTCACCCACTTCAACAGAACTGCGCTTCCATTGATA | + |
|
Preference number: 5 (lower is better) Translates to: SCIPQSNKGKLIQPP*SCVTHFNRTALPLI Trigger: TATCAATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGGAATACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
||
| CDS TCA 90 bp | GTCTTCACTACTTCAGTTGTATTCCTCAATCCAACAAAGGAAAATTaGTACAGCCTCCATGATCTTGTGTCACCCACTTCAACAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VFTTSVVFLNPTKEN*YSLHDLVSPTSTEL Trigger: CAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
||
| CDS GCA 90 bp | ATTGATACAGCCTCCATGATCTTGTGTCACCCACTTCAACAGAACTaGGCTTCCATTGATAAACAATTTCTTCACGAGGATATCCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: IDTASMILCHPLQQN*ASIDKQFLHEDIHN Trigger: GTTATGGATATCCTCGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTATCAATATCAGGTCGAAGTTTGTaGTCATACCCTTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LESAFCLHKIQRITPLSISGRSL*SYPSSR Trigger: CCTGCTGGAAGGGTATGACAACAAACTTCGACCTGA...TATTGATAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGTCATCCATTGGGAAGTaGTGTAATTGCAACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KVQLIMTEVSQSLHLITMSSIGK*CNCNWH Trigger: GTGCCAGTTGCAATTACACAACTTCCCAATGGATGA...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CAA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTTCATCCATTGGGAAGTaGTGTAATTGCAACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFSSIGK*CNCNWH Trigger: GTGCCAGTTGCAATTACACAACTTCCCAATGGATGA...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGTTCTTCATCCCTCTCTaGAAGGTGTGTGGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KVQLIMTEVSQSLHLITMFFIPL*KVCGIV Trigger: AACAATGCCACACACCTTCAAGAGAGGGATGAAGAA...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCATTCTTCATCCCTCTCTaGAAGGTGTGTGGCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KGILLSVTALVLTLLCLAFFIPL*KVCGIV Trigger: AACAATGCCACACACCTTCAAGAGAGGGATGAAGAA...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTATTTTCCCCACCATATaGCTATTCAACCGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFIFPTI*LFNRRT Trigger: AGTTCTCCGGTTGAATAGCAATATGGTGGGGAAAAT...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTGAGAACTGCGCTTCCATaGATAAACAATTTCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: ILLSVTALVLTLLCLAGLRTALP*INNFFT Trigger: CGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCT...CAAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTCATAGTCACCAGAAGTaGTCTTCACTACTTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFHSHQK*SSLLQL Trigger: CAACTGAAGTAGTGAAGACAACTTCTGGTGACTATG...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | TTGGACTTAGAAAGTGCATTTTGTCTCCATAAGATTCAGCGAATAACACCCCTAAGAACTGCGCTTCCATaGATAAACAATTTCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LDLESAFCLHKIQRITPLRTALP*INNFFT Trigger: CGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCT...TAGGGGTGTTATTCGCTGAATCTTATGGAGACAAAATGCACTTTCTAAGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAACTCATCATGACTGAAGTCAGCCAATCACTCCATTTAATTACTATGTGTTCATTTGAATGGTaGCTGATCTGGGACGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: KVQLIMTEVSQSLHLITMCSFEW*LIWDEY Trigger: ATATTCGTCCCAGATCAGCAACCATTCAAATGAACA...CATAGTAATTAAATGGAGTGATTGGCTGACTTCAGTCATGATGAGTTGGACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS-3UTR CAA 90 bp | TATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCAGGTTTTGTTCATTTGAATGGTaGCTGATCTGGGACGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: YLAQCNSSCSNFTLPCRFCSFEW*LIWDEY Trigger: ATATTCGTCCCAGATCAGCAACCATTCAAATGAACA...AAACCTGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS-3UTR CAA 90 bp | AAAGGTATCTTGCTCAGTGTAACAGCTCTTGTTCTAACTTTACTTTGCCTTGCATCTTCACTACTTCAGTaGTATTCCTCAATCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: KGILLSVTALVLTLLCLASSLLQ*YSSIQQ Trigger: TTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGA...TGCAAGGCAAAGTAAAGTTAGAACAAGAGCTGTTACACTGAGCAAGATACCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
||
| CDS TCA 72 bp | TTGAAGGTGTGTGGCATTGTTCATTTGAATGGTTGCTaGTCTGGGACGAATATCAATGGTAGGGGCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LKVCGIVHLNGC*SGTNINGRGRV Trigger: AACCCTGCCCCTACCATTGATATTCGTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070725.11 |
||
| CDS TCA 72 bp | CCTCAATCCAACAAAGGAAAATTGATACAGCCTCCATaGTCTTGTGTCACCCACTTCAACAGAACTGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PQSNKGKLIQPP*SCVTHFNRTAL Trigger: AAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS TCA 72 bp | TTGAAGGTGTGTGGCATTGTTCATTTGAATGGTTGCTaGTCTGGGACGAATATCAATGGTAGGGGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKVCGIVHLNGC*SGTNINGRGLE Trigger: TTCAAGGCCCCTACCATTGATATTCGTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070735.10 |
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| CDS GCA 72 bp | GCCTCCATGATCTTGTGTCACCCACTTCAACAGAACTaGGCTTCCATTGATAAACAATTTCTTCACGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: ASMILCHPLQQN*ASIDKQFLHED Trigger: ATCCTCGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CCA 72 bp | CATAGCCATATTCTTCATCCCTCTCTTGAAGGTGTGTaGCATTGTTCATTTGAATGGTTGCTGATCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HSHILHPSLEGV*HCSFEWLLIWD Trigger: GTCCCAGATCAGCAACCATTCAAATGAACAATGCCACACACCTTCAAGAGAGGGATGAAGAATATGGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 |
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| CDS CAA 72 bp | ATCCAACAAAGGAAAATTGATACAGCCTCCATGATCTaGTGTCACCCACTTCAACAGAACTGCGCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: IQQRKIDTASMI*CHPLQQNCASI Trigger: AATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 72 bp | CGAAGTACACAGACATCACCACATAGTCACCAGAAGTaGTCTTCACTACTTCAGTTGTATTCCTCAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSTQTSPHSHQK*SSLLQLYSSIQ Trigger: TTGGATTGAGGAATACAACTGAAGTAGTGAAGACAACTTCTGGTGACTATGTGGTGATGTCTGTGTACTTCG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 90 bp | CAGACATCACCACATAGTCACCAGAAGTTGTCTTCACTACTTCAGTaGTATTCCTCAATCCAACAAAGGAAAATTGATACAGCCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: QTSPHSHQKLSSLLQ*YSSIQQRKIDTASM Trigger: CATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGACAACTTCTGGTGACTATGTGGTGATGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 90 bp | TGCTCAGATCGAAGTACACAGACATCACCACATAGTCACCAGAAGTaGTCTTCACTACTTCAGTTGTATTCCTCAATCCAACAAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CSDRSTQTSPHSHQK*SSLLQLYSSIQQRK Trigger: TTTCCTTTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGACAACTTCTGGTGACTATGTGGTGATGTCTGTGTACTTCGATCTGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 90 bp | TATTCCTCAATCCAACAAAGGAAAATTGATACAGCCTCCATGATCTaGTGTCACCCACTTCAACAGAACTGCGCTTCCATTGATAAACAA | + |
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Preference number: 6 (lower is better) Translates to: YSSIQQRKIDTASMI*CHPLQQNCASIDKQ Trigger: TTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS TCA 72 bp | ACTTCAGTTGTATTCCTCAATCCAACAAAGGAAAATTaGTACAGCCTCCATGATCTTGTGTCACCCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSVVFLNPTKEN*YSLHDLVSPTS Trigger: TGAAGTGGGTGACACAAGATCATGGAGGCTGTATCAATTTTCCTTTGTTGGATTGAGGAATACAACTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 72 bp | TCTTGTGTCACCCACTTCAACAGAACTGCGCTTCCATaGATAAACAATTTCTTCACGAGGATATCCATAACT | + |
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Preference number: 6 (lower is better) Translates to: SCVTHFNRTALP*INNFFTRISIT Trigger: AGTTATGGATATCCTCGTGAAGAAATTGTTTATCAATGGAAGCGCAGTTCTGTTGAAGTGGGTGACACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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| CDS CAA 72 bp | CCACATAGTCACCAGAAGTTGTCTTCACTACTTCAGTaGTATTCCTCAATCCAACAAAGGAAAATTGATACA | + |
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Preference number: 6 (lower is better) Translates to: PHSHQKLSSLLQ*YSSIQQRKIDT Trigger: TGTATCAATTTTCCTTTGTTGGATTGAGGAATACAACTGAAGTAGTGAAGACAACTTCTGGTGACTATGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070725.11 ENSMUST00000070735.10 ENSMUST00000109290.2 |
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