Pregenerated sensors for GABRE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031340Ensembl transcript IDs: ENSMUST00000064780.4
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCTCCTCAGGCTTGCTGCTGCTGCTATTGTCTCTCAACTCCCTTaGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: TLLRLAAAAIVSQLP*QKGLGPHGELRWLL Trigger: GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCTGAGGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 90 bp | GAAGGAGGACCAGCAGAGACATACTCTCCTCAGGCTTGCTGCTGCTaGTATTGTCTCTCAACTCCCTTGGCAAAAGGGCTTAGGACCACA | + |
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Preference number: 1 (lower is better) Translates to: EGGPAETYSPQACCC*YCLSTPLAKGLRTT Trigger: TGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCTGAGGAGAGTATGTCTCTGCTGGTCCTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 90 bp | GGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCCCCTaGGAGACACAAAGCCTAGCACCTGGATCAGGGCTGGGAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: GNDCCSTKCSWFLGP*ETQSLAPGSGLGKS Trigger: TGACTTTCCCAGCCCTGATCCAGGTGCTAGGCTTTGTGTCTCCCAGGGGCCAAGAAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 90 bp | GCACAGCAGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTaGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AQQQRQVTFSNRPTC*LLSSYREWCVCVCV Trigger: CACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCTGCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 90 bp | ATGGCACAGCAGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTaGTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: MAQQQRQVTFSNRPT*WLLSSYREWCVCVC Trigger: ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCTGCTGTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 90 bp | GAAAGAAAATTGAGTCATGCTGACCAGAGCTGCCTAGCTCTGCCATaGACTTTAACAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ERKLSHADQSCLALP*TLTGDRGLQIGFQK Trigger: TTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTGTTAAAGTGCATGGCAGAGCTAGGCAGCTCTGGTCAGCATGACTCAATTTTCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 90 bp | TTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTaGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGTATGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: FSNRPTCWLLSSYRE*CVCVCVYECVCMCV Trigger: CACACACATACACACACACTCATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CAA 90 bp | TACTCTCCTCAGGCTTGCTGCTGCTGCTATTGTCTCTCAACTCCCTaGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: YSPQACCCCYCLSTP*AKGLRTTWGTEVVA Trigger: AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCTGAGGAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGGTTGAGAAGATTGAGTaGAGGGGCCAACAGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LAGSFPPTESGVCVCVCMVEKIE*RGQQKE Trigger: CTCCTTCTGTTGGCCCCTTCACTCAATCTTCTCAAC...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGTGTTCTTGGTTTCTTaGCCCCTGGGAGACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QVTGGSRLASRKIHNPIEVFLVS*PLGDTK Trigger: CTTTGTGTCTCCCAGGGGCCAAGAAACCAAGAACAC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGCAAATGTGGGCACACTaGACATCATGGATACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LAGSFPPTESGVCVCVCMQMWAH*TSWILF Trigger: AAAGAGTATCCATGATGTTCAGTGTGCCCACATTTG...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTTCAAATAGGCCCACTTaGTGGCTCCTTTCCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFSNRPT*WLLSSY Trigger: GTAGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGA...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTGGCTGGGAAAGTCACTaGGGAAGTTACAGAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFGWESH*GSYRKN Trigger: ATTCTTTCTGTAACTTCCCCAGTGACTTTCCCAGCC...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTGGGATGGCAGTGAACTaGCTTATGGGTCCAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TCTQRCHRAITSFQIEMFGMAVN*LMGPGA Trigger: GGCCCCTGGACCCATAAGCCAGTTCACTGCCATCCC...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTTCAGCATATACAAGCATTGGGGCATATACAAATTCATTTCACTGGGTTCATGCTGACCAGAGCTaGCTAGCTCTGCCATGCACT | + |
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Preference number: 2 (lower is better) Translates to: FCSAYTSIGAYTNSFHWVHADQS*LALPCT Trigger: AGTGCATGGCAGAGCTAGGCAGCTCTGGTCAGCATG...AACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTCACCTGGATCAGGGCTaGGAAAGTCACTGGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TCTQRCHRAITSFQIEMFHLDQG*ESHWGS Trigger: ACTTCCCCAGTGACTTTCCCAGCCCTGATCCAGGTG...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTTATACTGTTGCTCTGTaGATTCTGGGGCTGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TCTQRCHRAITSFQIEMFYTVAL*ILGLSL Trigger: CAGGCTCAGCCCCAGAATGCACAGAGCAACAGTATA...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 72 bp | GACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTaGTCTGTGCATTCTGGGGCTGAGCCTGAGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: DLRMRTLLLLYC*SVHSGAEPELG Trigger: GCCCAGCTCAGGCTCAGCCCCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 72 bp | AGGCTTGCTGCTGCTGCTATTGTCTCTCAACTCCCTTaGCAAAAGGGCTTAGGACCACATGGGGAACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RLAAAAIVSQLP*QKGLGPHGELR Trigger: CCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 72 bp | TGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCCCCTaGGAGACACAAAGCCTAGCACCTGGATCAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CCSTKCSWFLGP*ETQSLAPGSGL Trigger: CAGCCCTGATCCAGGTGCTAGGCTTTGTGTCTCCCAGGGGCCAAGAAACCAAGAACACTTTGTTGAGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR CCA 72 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTaGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: RPTCWLLSSYRE*CVCVCVYECVC Trigger: ACACACACACTCATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CAA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGGGGGAACTGAGGTGGTaGCTCCATGAGCTACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RLKDEDPPSAILLLCAFWGELRW*LHELLA Trigger: AGCCAGTAGCTCATGGAGCAACCACCTCAGTTCCCC...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 72 bp | CAGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTaGTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QQRQVTFSNRPT*WLLSSYREWCV Trigger: CACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR TCA 72 bp | AGCTGTTACTTGAGAAGTGCTGTTGAGAAGATTGAGTaGAGGGGCCAACAGAAGGAGGACCAGCAGAGACAT | + |
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Preference number: 3 (lower is better) Translates to: SCYLRSAVEKIE*RGQQKEDQQRH Trigger: ATGTCTCTGCTGGTCCTCCTTCTGTTGGCCCCTTCACTCAATCTTCTCAACAGCACTTCTCAAGTAACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR GCA 72 bp | GCAAGAGAAAGAAAATTGAGTCATGCTGACCAGAGCTaGCTAGCTCTGCCATGCACTTTAACAGGTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: ARERKLSHADQS*LALPCTLTGDR Trigger: CCTGTCACCTGTTAAAGTGCATGGCAGAGCTAGGCAGCTCTGGTCAGCATGACTCAATTTTCTTTCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CAA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGGAGGTGAGCTGTTACTaGAGAAGTGCTGTTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RLKDEDPPSAILLLCAFWEVSCY*RSAVEK Trigger: CTTCTCAACAGCACTTCTCAAGTAACAGCTCACCTC...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR TCA 72 bp | TTCCCAATCCCACCCACCCCCATAACATACAGACACTaGTTCTGTTCAGCATATACAAGCATTGGGGCATAT | + |
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Preference number: 3 (lower is better) Translates to: FPIPPTPITYRH*FCSAYTSIGAY Trigger: ATATGCCCCAATGCTTGTATATGCTGAACAGAATCAGTGTCTGTATGTTATGGGGGTGGGTGGGATTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTCATCATGGATACTCTTaGAAGAATAGAGAGGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: TCTQRCHRAITSFQIEMFHHGYS*KNREVS Trigger: GCTCACCTCTCTATTCTTCAAAGAGTATCCATGATG...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR TCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGGCTGTGGCTCAGGCTaGGGCTCAGGCTGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLGCGSG*GSGWGW Trigger: CCAGCCCCAGCCTGAGCCTCAGCCTGAGCCACAGCC...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR GCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGGTTGTGGCTGCGGCTaGGGCTCAGGCTCCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLGCGCG*GSGSGS Trigger: GGAGCCGGAGCCTGAGCCGCAGCCGCAGCCACAACC...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGGTCTGGGTCGGGGTTaGCGCCCAGCCTGGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPTCWLLSSYREWCVCVCGLGRG*RPAWTW Trigger: CCAGGTCCAGGCTGGGCGCCAACCCCGACCCAGACC...ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | GGGCCAACAGAAGGAGGACCAGCAGAGACATACTCTCCTCAGGCTTGCTGCTGCGCTCAGGCTCCGGCTTaGGTTCTGGCTGGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GPTEGGPAETYSPQACCCAQAPA*VLAGAQ Trigger: CTGAGCCCCAGCCAGAACCCAAGCCGGAGCCTGAGC...GCAGCAGCAAGCCTGAGGAGAGTATGTCTCTGCTGGTCCTCCTTCTGTTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGGGCTCCGGCTGGGGCTaGGGCATGGGCCAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMGSGWG*GMGQGR Trigger: CCTGCCTTGGCCCATGCCTCAGCCCCAGCCGGAGCC...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGGCTCGGGCTCCGGATaGGGATGGGGATGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLGSGSG*GWGWGW Trigger: CCATCCCCATCCCCATCCCCATCCGGAGCCCGAGCC...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCCAGCCAACGGCTGTaGTTGTGGCTGCGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVAPSQRL*LWLRLR Trigger: CCGCAGCCGCAGCCACAACCACAGCCGTTGGCTGGG...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGGCTTGGGTTCTGGCTaGGGCTCAGGCTCCGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLGLGSG*GSGSGL Trigger: CAAGCCGGAGCCTGAGCCCCAGCCAGAACCCAAGCC...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGCTCAGGCTCCGGCTaGGGCTCCGGCTTGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGSGSG*GSGLGS Trigger: CGAGCCCAAGCCGGAGCCCCAGCCGGAGCCTGAGCC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR TCA 90 bp | GTTTCTTGGCCCCTGGGAGACACAAAGCCTAGCACCTGGATCAGGGCTGGGAAAGGTTGGGGTTCAGGCTaGGGTTCGGGTTGGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: VSWPLGDTKPSTWIRAGKGWGSG*GSGWGS Trigger: TGATCCCCAACCCGAACCTCAGCCTGAACCCCAACC...TTTCCCAGCCCTGATCCAGGTGCTAGGCTTTGTGTCTCCCAGGGGCCAAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTAGCCTGGACCTGGCCTaGGGTCTGGGGCTCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVASLDLA*GLGLRL Trigger: CAACCTGAGCCCCAGACCCCAGGCCAGGTCCAGGCT...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGTTGGCGCCCAGCCTaGACCTGGCCTGGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGWRPA*TWPGVW Trigger: CCAGACCCCAGGCCAGGTCCAGGCTGGGCGCCAACC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGCTCAGGCTCCGGCTaGGGCTCGGGCTCAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGSGSG*GSGSGS Trigger: TGAGCCTGAGCCCGAGCCCCAGCCGGAGCCTGAGCC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGGCTCAGGCTCCGGCTTaGGTTCTGGCTGGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMAQAPA*VLAGAP Trigger: CGGAGCCCCAGCCAGAACCCAAGCCGGAGCCTGAGC...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR GCA 90 bp | AGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTGGCCCCGCTGCCAGCTaGCTCCCTCACAACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRDRLLSQIGPLAGSFPPGPAAS*LPHNQE Trigger: CTCCTGGTTGTGAGGGAGGCAGCTGGCAGCGGGGCC...AGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | AGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTACCTGGCCTGGGGTCTaGGGCTCAGGTTGGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SRDRLLSQIGPLAGSFPPTWPGV*GSGWGS Trigger: CGAGCCCCAACCTGAGCCCCAGACCCCAGGCCAGGT...AGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | AGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTGGCTCAGGCTCAGGCTaGGGCTCAGGCTCCGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SRDRLLSQIGPLAGSFPPGSGSG*GSGSGL Trigger: CAAGCCGGAGCCTGAGCCCCAGCCTGAGCCTGAGCC...AGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGATGGGGATGGGGATaGGGCTCCGGTTCCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGWGWG*GSGSGS Trigger: GGAGCCGGAACCGGAGCCCCATCCCCATCCCCATCC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR GCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTAAACATGGATGCAGATaGGGCCCCGCTGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVAKHGCR*GPAASC Trigger: GCAGCTGGCAGCGGGGCCGCATCTGCATCCATGTTT...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGTCTGGGGCTCAGGTTaGGGCTCGGGTTGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEVWGSG*GSGWGS Trigger: TGAGCCCCAACCCGAGCCCCAACCTGAGCCCCAGAC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCGGCTTGGGTTCTGGCTaGGGCTCCGGCTGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSVVGNDCCSTKCSWFLGGLGSG*GSGWGS Trigger: GGAGCCCCAGCCGGAGCCCCAGCCAGAACCCAAGCC...GCCAAGAAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCCCCTACAGAGGCCCTaGCAGCAGCAGCTTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLPLQRP*QQQLLS Trigger: AGATAGAAGCTGCTGCTGCCAGGGCCTCTGTAGGGG...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGGGTTGGGGATCAGGCTaGGGCTCAGGTTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWGWGSG*GSGWGS Trigger: CGAGCCCCAACCTGAGCCTCAGCCTGATCCCCAACC...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAACTCAGGCTCAGGCTGTaGCTGTGGCTCAGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIELRLRL*LWLRLW Trigger: CCACAGCCTGAGCCACAGCCACAGCCTGAGCCTGAG...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCATGAGCAGCAGCTTCTATCTTaGTCCAGAAGGAGACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWQKGLGPHGELRWLLHEQQLLS*SRRRPR Trigger: CCTGGGTCTCCTTCTGGATCAAGATAGAAGCTGCTG...CTCATGGAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGCCTCCAGGGACACTaGGGTCTTCTTGATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVARLQGH*GLLDLG Trigger: TCCAAGATCAAGAAGACCTCAGTGTCCCTGGAGGCG...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR GCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGAGCACACATAGCTTCTaGCACACCGCCTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMSTHSF*HTASRD Trigger: GTCCCTGGAGGCGGTGTGGCAGAAGCTATGTGTGCT...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCCTCGGGCAAAGGCAGTaGCAGGGGCCAAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVVGNDCCSTKCSWFLGLGQRQ*QGPRQR Trigger: CCTCTGCCTTGGCCCCTGCCACTGCCTTTGCCCGAG...GCCAAGAAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGGGTTGGGGCTCGGGTTaGGGCTCAGGTTGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWGWGSG*GSGWGS Trigger: TGAACCCCAACCTGAGCCCCAACCCGAGCCCCAACC...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| 3UTR CAA 72 bp | CAGGCTTGCTGCTGCTGCTATTGTCTCTCAACTCCCTaGGCAAAAGGGCTTAGGACCACATGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QACCCCYCLSTP*AKGLRTTWGTE Trigger: CTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| 3UTR CAA 72 bp | AGAAGGAGGACCAGCAGAGACATACTCTCCTCAGGCTaGCTGCTGCTGCTATTGTCTCTCAACTCCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRTSRDILSSG*LLLLLSLNSLG Trigger: GCCAAGGGAGTTGAGAGACAATAGCAGCAGCAGCAAGCCTGAGGAGAGTATGTCTCTGCTGGTCCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGTCCAACCCTCCACTaGAGGGCCAGGAACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGPTLH*RARNML Trigger: CAACATGTTCCTGGCCCTTCAGTGGAGGGTTGGACC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTAAGACTACATCATCATaGCCAGGGGATTCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTCWLLSSYREWCVCVCKTTSS*PGDSAW Trigger: CCAGGCTGAATCCCCTGGCCATGATGATGTAGTCTT...ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTCAGCATATACAAGCATTGGGGCATATACAAATTCATTTCACTGGGTTGGCTGGGGCTCGGGCTaGGGCTCAGGCTCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCSAYTSIGAYTNSFHWVGWGSG*GSGSGW Trigger: CCAGCCTGAGCCTGAGCCTCAGCCCGAGCCCCAGCC...AACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGTCCGGGATCCACAACTaGCTCACCACGTTGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWSGIHN*LTTLPC Trigger: GCATGGCAACGTGGTGAGCCAGTTGTGGATCCCGGA...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGGGGCCAGGAACATGTTaGGAAGCATCAGGAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMGPGTC*EASGEL Trigger: AAGTTCTCCTGATGCTTCTCAACATGTTCCTGGCCC...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGTTCTTTCCACTAGGTTaGGGCTCCAGCTGGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWFFPLG*GSSWDW Trigger: CCAGTCCCAGCTGGAGCCTCAACCTAGTGGAAAGAA...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCATGAGCAAACTCTAGCAGAGTaGAGAAGCACAAGACGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PWQKGLGPHGELRWLLHEQTLAE*RSTRRN Trigger: GTTTCGTCTTGTGCTTCTGCACTCTGCTAGAGTTTG...CTCATGGAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCAGGTCTGGTGGAAGATaGTGTCAATGGAATATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLRSGGR*CQWNIP Trigger: TGGAATATTCCATTGACATCATCTTCCACCAGACCT...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCAGGAGAGCATTGTGGTaGCAGAAGAAGGAACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLRRALW*QKKEHN Trigger: ATTATGTTCCTTCTTCTGTCACCACAATGCTCTCCT...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTTTCTGGTTCTTTTGCTaGAAGCTTCTTTCCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTCWLLSSYREWCVCVCFWFFC*KLLSTR Trigger: CCTAGTGGAAAGAAGCTTCCAGCAAAAGAACCAGAA...ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTACCTTTCCATCCTTGTaGATGAGAGCCATCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVATFPSL*MRAIWL Trigger: TAACCAGATGGCTCTCATCCACAAGGATGGAAAGGT...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCATGAGGGAAAATTGAGCATGTaGAGTGAGCATCTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PWQKGLGPHGELRWLLHEGKLSM*SEHLAS Trigger: TGATGCAAGATGCTCACTCCACATGCTCAATTTTCC...CTCATGGAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTGGCATCGGCTGGGGCTaGGAACTAAAGACTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFGIGWG*ELKTTS Trigger: TGATGTAGTCTTTAGTTCCCAGCCCCAGCCGATGCC...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCAGCATATACAAGCATTGGGGCATATACAAATTCATTTCACTGGGTTCAACGGCTGTGGTTGTaGCTGCGGCTGCGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCSAYTSIGAYTNSFHWVQRLWL*LRLRLR Trigger: CCTGAGCCGCAGCCGCAGCCACAACCACAGCCGTTG...AACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGTCATGCAATCAACAGTaGGTTCTGGTTCTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMSCNQQ*VLVLLL Trigger: CAGCAAAAGAACCAGAACTCACTGTTGATTGCATGA...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | TCAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCATTTTCCTCATAGGTaGCAATCTCACACACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: STPLAKGLRTTWGTEVVAHFPHR*QSHTQT Trigger: TGTTTGTGTGTGAGATTGTCACCTATGAGGAAAATG...AGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGTGTATGACACTGAGGTCTTCTTaGTCTTGGAGACCATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LAGSFPPTESGVCVCVCMTLRSS*SWRPLI Trigger: TATCAATGGTCTCCAAGATCAAGAAGACCTCAGTGT...CATACACACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTTGTAGGTCAGGAAGTTaGGCACAGCAAACTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFCRSGS*AQQTLA Trigger: TGCTAGAGTTTGCTGTGCTCAACTTCCTGACCTACA...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR GCA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCAAGACGAAACAAATTaGAATATAGAAGTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPWQKGLGPHGELRWLLQDETN*NIEVQS Trigger: GCTTTGGACTTCTATATTGCAATTTGTTTCGTCTTG...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAAATTTTGAAAGACAATaGAGCCAAACCGCCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVTGGSRLASRKIHNPIENFERQ*SQTACL Trigger: TAAGCAGGCGGTTTGGCTTCATTGTCTTTCAAAATT...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGTCATACCAGGTCTGGTaGAAGATGATGTCAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWSYQVW*KMMSME Trigger: TTCCATTGACATCATCTTCCACCAGACCTGGTATGA...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGACTTAAGGATGAGGACCCTCCTTCTGCTATACTGTTGCTCTGTGCATTCTGGTCATCATACCAGGTCTaGTGGAAGATGATGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLKDEDPPSAILLLCAFWSSYQV*WKMMSM Trigger: CATTGACATCATCTTCCACCAGACCTGGTATGATGA...CCAGAATGCACAGAGCAACAGTATAGCAGAAGGAGGGTCCTCATCCTTAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTCATGAAGTCACCAAATaGGGTAGAGATGATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRDRLLSQIGPLAGSFPPHEVTK*GRDDFS Trigger: ACTGAAATCATCTCTACCCCATTTGGTGACTTCATG...AGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGACAGGTTACTTTCTCAAATAGGCCCACTTGCTGGCTCCTTTCCTCCTGTGATATCATACTCTTaGGTCCTCTTAGAATTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRDRLLSQIGPLAGSFPPVISYS*VLLEFL Trigger: TAGGAATTCTAAGAGGACCCAAGAGTATGATATCAC...AGGAGGAAAGGAGCCAGCAAGTGGGCCTATTTGAGAAAGTAACCTGTCTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCATCAACAGTGAGTTCTaGTTCTTTTGCTGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSVVGNDCCSTKCSWFLGINSEF*FFCWKL Trigger: AAGCTTCCAGCAAAAGAACCAGAACTCACTGTTGAT...GCCAAGAAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTCAGCATATACAAGCATTGGGGCATATACAAATTCATTTCACTGGGTTAATCCATTGGAAAATTaGGCATGTGGAGTGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FCSAYTSIGAYTNSFHWVNPLEN*ACGVSI Trigger: GATGCTCACTCCACATGCTCAATTTTCCAATGGATT...AACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| 3UTR CAA 72 bp | CATACAGACACTGATTCTGTTCAGCATATACAAGCATaGGGGCATATACAAATTCATTTCACTGGGTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: HTDTDSVQHIQA*GHIQIHFTGLL Trigger: TAGTAACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAATCAGTGTCTGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS CCA 90 bp | CTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCTGGCTCAGGCTCTaGCTCCGGCTGGGGCTGAGGCATGGGCCAAGGCAGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRLRLRLRLWLRL*LRLGLRHGPRQGLG Trigger: CCCCAGCCCCTGCCTTGGCCCATGCCTCAGCCCCAGCCGGAGCCAGAGCCTGAGCCAGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS CCA 90 bp | TTGGGGAAGAGGCTGACGGCCAGCCAGAGGCTGAGGCTGAGGTTCTaGTTGGGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGKRLTASQRLRLRF*LGLRLRLRLRLRLR Trigger: CCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCCCAACCAGAACCTCAGCCTCAGCCTCTGGCTGGCCGTCAGCCTCTTCCCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CAA 90 bp | GGGCCAACAGAAGGAGGACCAGCAGAGACATACTCTCCTCAGGCTTGCTGCTGCAGCCAACGGCTGTGGTaGTGGCTGCGGCTGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPTEGGPAETYSPQACCCSQRLW*WLRLRL Trigger: GAGCCGCAGCCGCAGCCACAACCACAGCCGTTGGCT...GCAGCAGCAAGCCTGAGGAGAGTATGTCTCTGCTGGTCCTCCTTCTGTTGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS GCA 90 bp | CTCATAGGTGACAATCTCACACACAAACACTTCCTGCTGCTGTCGTaGACGGGCACGAGCACGAGCGCGGGTGCGTGCACGAGCACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIGDNLTHKHFLLLS*TGTSTSAGACTSTS Trigger: ACTCGTGCTCGTGCACGCACCCGCGCTCGTGCTCGTGCCCGTGCACGACAGCAGCAGGAAGTGTTTGTGTGTGAGATTGTCACCTATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTGGGTTGGGGCTCAGGTaGGGGTTCAGGCTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPTCWLLSSYREWCVCVCGLGLR*GFRLRF Trigger: GAACCTCAGCCTGAACCCCAACCTGAGCCCCAACCC...ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CAA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTAGGTCTGGGTCGGGGTaGGCGCCCAGCCTGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFRSGSG*APSLDL Trigger: CAGGTCCAGGCTGGGCGCCAACCCCGACCCAGACCT...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGCCAACAGAAGGAGGACCAGCAGAGACATACTCTCCTCAGGCTTGCTGGGATTCGAGAAGCTCTaGTCAGTTTCCCACCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGANRRRTSRDILSSGLLGFEKL*SVSHLG Trigger: GCCCAGGTGGGAAACTGACAAGAGCTTCTCGAATCC...CAGCAAGCCTGAGGAGAGTATGTCTCTGCTGGTCCTCCTTCTGTTGGCCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | GAGCACCAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTGGCTCAGGCTCCGGCTaGGGTTCTGGCTGGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EHQSVVGNDCCSTKCSWFGSGSG*GSGWGS Trigger: TGAGCCCCAGCCAGAACCCAAGCCGGAGCCTGAGCC...AAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTGGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | GTTTCTTGGCCCCTGGGAGACACAAAGCCTAGCACCTGGATCAGGGCTGGGAAAAACTGGCTCACCACGTaGCCATGCAGAATAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VSWPLGDTKPSTWIRAGKNWLTT*PCRIRV Trigger: AACCCTTATTCTGCATGGCAACGTGGTGAGCCAGTT...TTTCCCAGCCCTGATCCAGGTGCTAGGCTTTGTGTCTCCCAGGGGCCAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCATGAGAGGGCCAGGAACATGTaGAGAAGCATCAGGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PWQKGLGPHGELRWLLHERARNM*RSIRRT Trigger: AGTTCTCCTGATGCTTCTCAACATGTTCCTGGCCCT...CTCATGGAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCCATGAGGAGGTCTTCTTGATCTaGGAGACCATTGATACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWQKGLGPHGELRWLLHEEVFLI*ETIDTP Trigger: AGGGGTATCAATGGTCTCCAAGATCAAGAAGACCTC...CTCATGGAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 90 bp | ACAGTGAGTTCTGGTTCTTTTGCTGGAAGCTTCTTTCCACTAGGTTaGGGCTCCAGCTGGGACTGGGGCTCTGATTTCATCTCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVSSGSFAGSFFPLG*GSSWDWGSDFISGS Trigger: AGAGCCAGAGATGAAATCAGAGCCCCAGTCCCAGCTGGAGCCTCAACCTAGTGGAAAGAAGCTTCCAGCAAAAGAACCAGAACTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | AGGCCCACTTGCTGGCTCCTTTCCTCCTACAGAGAGTGGTGTGTGTGTGTGTGTAACCGCCTGCTTACATaGAAGAAGAATGTCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: RPTCWLLSSYREWCVCVCNRLLT*KKNVMT Trigger: GGTCATGACATTCTTCTTCAATGTAAGCAGGCGGTT...ACACACACACACACACCACTCTCTGTAGGAGGAAAGGAGCCAGCAAGTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | TTCTGTTCAGCATATACAAGCATTGGGGCATATACAAATTCATTTCACTGGGTTGGGCCAAGGCAGAGGTaGGGGAAGAGGCTGACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSAYTSIGAYTNSFHWVGPRQR*GKRLTA Trigger: GGCCGTCAGCCTCTTCCCCAACCTCTGCCTTGGCCC...AACCCAGTGAAATGAATTTGTATATGCCCCAATGCTTGTATATGCTGAACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAAACACCTTTCCATCCTaGTGGATGAGAGCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QVTGGSRLASRKIHNPIENTFPS*WMRAIW Trigger: CCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTT...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CAACTCCCTTGGCAAAAGGGCTTAGGACCACATGGGGAACTGAGGTGGTTGCTCGAATCCATTGGAAAATaGAGCATGTGGAGTGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLPWQKGLGPHGELRWLLESIGK*SMWSEH Trigger: ATGCTCACTCCACATGCTCAATTTTCCAATGGATTC...GAGCAACCACCTCAGTTCCCCATGTGGTCCTAAGCCCTTTTGCCAAGGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 90 bp | ATCTTGGAGACCATTGATACCCCTCTTCAGCATTTTCCTCATAGGTaGCAATCTCACACACAAACACTTCCTGCTGCTGTCGTGCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILETIDTPLQHFPHR*QSHTQTLPAAVVHG Trigger: CCCGTGCACGACAGCAGCAGGAAGTGTTTGTGTGTGAGATTGTCACCTATGAGGAAAATGCTGAAGAGGGGTATCAATGGTCTCCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTAGGCTGAGGTTCTGGTaGGGGCTCAGGCTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCTQRCHRAITSFQIEMFRLRFW*GLRLRL Trigger: GAGCCTGAGCCTGAGCCCCAACCAGAACCTCAGCCT...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CAGGTGACAGGGGGCTCCAGATTGGCTTCCAGAAAGATCCACAATCCTATAGAAGGTGATATCATACTCTaGGGTCCTCTTAGAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVTGGSRLASRKIHNPIEGDIIL*GPLRIP Trigger: AGGAATTCTAAGAGGACCCAAGAGTATGATATCACC...TTCTATAGGATTGTGGATCTTTCTGGAAGCCAATCTGGAGCCCCCTGTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | CAATCAGTGGTAGGCAATGACTGCTGCTCAACAAAGTGTTCTTGGTTTCTTGGCGACACTGAGGTCTTCTaGATCTTGGAGACCATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSVVGNDCCSTKCSWFLGDTEVF*ILETID Trigger: ATCAATGGTCTCCAAGATCAAGAAGACCTCAGTGTC...GCCAAGAAACCAAGAACACTTTGTTGAGCAGCAGTCATTGCCTACCACTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 90 bp | GCATCAATGGTCATCCTAACTGAGTACAACACCTTTCCATCCTTGTaGATGAGAGCCATCTGGTTAGGTATGGTGATATCATACTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASMVILTEYNTFPSL*MRAIWLGMVISYSW Trigger: CCAAGAGTATGATATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTACTCAGTTAGGATGACCATTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 90 bp | AGAAGCACAAGACGAAACAAATTGCAATATAGAAGTCCAAAGCCGTaGGATAGGAGACACGAGGGAAATTCTTACAGGACAAGGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSTRRNKLQYRSPKP*DRRHEGNSYRTRYP Trigger: TGGGTACCTTGTCCTGTAAGAATTTCCCTCGTGTCTCCTATCTCACGGCTTTGGACTTCTATATTGCAATTTGTTTCGTCTTGTGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 90 bp | CTAACTGAGTACAACACCTTTCCATCCTTGTGGATGAGAGCCATCTaGTTAGGTATGGTGATATCATACTCTTGGGTCCTCTTAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LTEYNTFPSLWMRAI*LGMVISYSWVLLEF Trigger: GAATTCTAAGAGGACCCAAGAGTATGATATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTACTCAGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTCAAGTGTTCTTCGCATaGATTTCGAGCTTGAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TCTQRCHRAITSFQIEMFQVFFA*ISSLKF Trigger: GAATTTCAAGCTCGAAATCAATGCGAAGAACACTTG...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS-3UTR CAA 90 bp | ACCTGTACCCAAAGATGTCACAGAGCTATAACAAGTTTCCAAATAGAAATGTTTGAGATGATTTCAGTTTaGTTGTTCACGCCTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCTQRCHRAITSFQIEMFEMISV*LFTPVK Trigger: TTTTACAGGCGTGAACAACAAAACTGAAATCATCTC...AAACATTTCTATTTGGAAACTTGTTATAGCTCTGTGACATCTTTGGGTACAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 72 bp | TCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTaGGGCTCAGGCTCCGGCTTGGGTTCTGGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGSGSGSGSG*GSGSGLGSGWG Trigger: GCCCCAGCCAGAACCCAAGCCGGAGCCTGAGCCCCAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGAGCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS GCA 72 bp | GACAATCTCACACACAAACACTTCCTGCTGCTGTCGTaGACGGGCACGAGCACGAGCGCGGGTGCGTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: DNLTHKHFLLLS*TGTSTSAGACT Trigger: CGTGCACGCACCCGCGCTCGTGCTCGTGCCCGTGCACGACAGCAGCAGGAAGTGTTTGTGTGTGAGATTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS GCA 72 bp | GCACCCGCGAATAGTTATCCAGACGATAAACATGGATaGAGATGCGGCCCCGCTGCCAGCTGCCTCCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: APANSYPDDKHG*RCGPAASCLPH Trigger: GTGAGGGAGGCAGCTGGCAGCGGGGCCGCATCTGCATCCATGTTTATCGTCTGGATAACTATTCGCGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS GCA 72 bp | GATAAACATGGATGCAGATGCGGCCCCGCTGCCAGCTaGCTCCCTCACAACCAGGAGCCATGCAGAAATACT | + |
|
Preference number: 6 (lower is better) Translates to: DKHGCRCGPAAS*LPHNQEPCRNT Trigger: AGTATTTCTGCATGGCTCCTGGTTGTGAGGGAGGCAGCTGGCAGCGGGGCCGCATCTGCATCCATGTTTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 72 bp | TCTGCCACACCGCCTCCAGGGACACTGAGGTCTTCTTaGTCTTGGAGACCATTGATACCCCTCTTCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SATPPPGTLRSS*SWRPLIPLFSI Trigger: AATGCTGAAGAGGGGTATCAATGGTCTCCAAGATCAAGAAGACCTCAGTGTCCCTGGAGGCGGTGTGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | TTCTGCCACACCGCCTCCAGGGACACTGAGGTCTTCTaGATCTTGGAGACCATTGATACCCCTCTTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FCHTASRDTEVF*ILETIDTPLQH Trigger: ATGCTGAAGAGGGGTATCAATGGTCTCCAAGATCAAGAAGACCTCAGTGTCCCTGGAGGCGGTGTGGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 72 bp | TCTGGTTCTTTTGCTGGAAGCTTCTTTCCACTAGGTTaGGGCTCCAGCTGGGACTGGGGCTCTGATTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGSFAGSFFPLG*GSSWDWGSDFI Trigger: GATGAAATCAGAGCCCCAGTCCCAGCTGGAGCCTCAACCTAGTGGAAAGAAGCTTCCAGCAAAAGAACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | CACAGGCTGAGGCTGAGGGCCAAAGACTACCTTATCTaGGGCAGGGGGTTTATTCTCCAGATTAACATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRLRLRAKDYLI*GRGFILQINMR Trigger: CCTCATGTTAATCTGGAGAATAAACCCCCTGCCCAAGATAAGGTAGTCTTTGGCCCTCAGCCTCAGCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | CACACCGCCTCCAGGGACACTGAGGTCTTCTTGATCTaGGAGACCATTGATACCCCTCTTCAGCATTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HTASRDTEVFLI*ETIDTPLQHFP Trigger: AGGAAAATGCTGAAGAGGGGTATCAATGGTCTCCAAGATCAAGAAGACCTCAGTGTCCCTGGAGGCGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | TATTCCATGTCTGGGGTGGAAATAGGCCCGAGGCTGTaGACAATGACTTCAACAGTGACCACAGTAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YSMSGVEIGPRL*TMTSTVTTVGF Trigger: GAAGCCTACTGTGGTCACTGTTGAAGTCATTGTCAACAGCCTCGGGCCTATTTCCACCCCAGACATGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 72 bp | GTTTCCCACCTGGGCGTTCAGTCATGCAATCAACAGTaGGTTCTGGTTCTTTTGCTGGAAGCTTCTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VSHLGVQSCNQQ*VLVLLLEASFH Trigger: GTGGAAAGAAGCTTCCAGCAAAAGAACCAGAACTCACTGTTGATTGCATGACTGAACGCCCAGGTGGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 90 bp | TCAATGGAATATTCCATGTCTGGGGTGGAAATAGGCCCGAGGCTGTaGACAATGACTTCAACAGTGACCACAGTAGGCTTCTCTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SMEYSMSGVEIGPRL*TMTSTVTTVGFSPM Trigger: CATTGGAGAGAAGCCTACTGTGGTCACTGTTGAAGTCATTGTCAACAGCCTCGGGCCTATTTCCACCCCAGACATGGAATATTCCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 72 bp | AGTCATGCAATCAACAGTGAGTTCTGGTTCTTTTGCTaGAAGCTTCTTTCCACTAGGTTGAGGCTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHAINSEFWFFC*KLLSTRLRLQL Trigger: CAGCTGGAGCCTCAACCTAGTGGAAAGAAGCTTCCAGCAAAAGAACCAGAACTCACTGTTGATTGCATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 72 bp | ACCTGGGCGTTCAGTCATGCAATCAACAGTGAGTTCTaGTTCTTTTGCTGGAAGCTTCTTTCCACTAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TWAFSHAINSEF*FFCWKLLSTRL Trigger: CAACCTAGTGGAAAGAAGCTTCCAGCAAAAGAACCAGAACTCACTGTTGATTGCATGACTGAACGCCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 72 bp | AACGAAGACGCTCATCATACCAGGTCTGGTGGAAGATaGTGTCAATGGAATATTCCATGTCTGGGGTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NEDAHHTRSGGR*CQWNIPCLGWK Trigger: TTTCCACCCCAGACATGGAATATTCCATTGACATCATCTTCCACCAGACCTGGTATGATGAGCGTCTTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS TCA 72 bp | ACCATTGATACCCCTCTTCAGCATTTTCCTCATAGGTaGCAATCTCACACACAAACACTTCCTGCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TIDTPLQHFPHR*QSHTQTLPAAV Trigger: GACAGCAGCAGGAAGTGTTTGTGTGTGAGATTGTCACCTATGAGGAAAATGCTGAAGAGGGGTATCAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 72 bp | TACAACACCTTTCCATCCTTGTGGATGAGAGCCATCTaGTTAGGTATGGTGATATCATACTCTTGGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YNTFPSLWMRAI*LGMVISYSWVL Trigger: GAGGACCCAAGAGTATGATATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | AAAAAGGTATCCGGGATCCACAACTGGCTCACCACGTaGCCATGCAGAATAAGGGTTTCAAATGTGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: KKVSGIHNWLTT*PCRIRVSNVSL Trigger: CAATGACACATTTGAAACCCTTATTCTGCATGGCAACGTGGTGAGCCAGTTGTGGATCCCGGATACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CCA 72 bp | GTCATCCTAACTGAGTACAACACCTTTCCATCCTTGTaGATGAGAGCCATCTGGTTAGGTATGGTGATATCA | + |
|
Preference number: 6 (lower is better) Translates to: VILTEYNTFPSL*MRAIWLGMVIS Trigger: TGATATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTACTCAGTTAGGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 72 bp | ATGGTCATCCTAACTGAGTACAACACCTTTCCATCCTaGTGGATGAGAGCCATCTGGTTAGGTATGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: MVILTEYNTFPS*WMRAIWLGMVI Trigger: TATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTACTCAGTTAGGATGACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 90 bp | CTTGCATCAATGGTCATCCTAACTGAGTACAACACCTTTCCATCCTaGTGGATGAGAGCCATCTGGTTAGGTATGGTGATATCATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LASMVILTEYNTFPS*WMRAIWLGMVISYS Trigger: AGAGTATGATATCACCATACCTAACCAGATGGCTCTCATCCACAAGGATGGAAAGGTGTTGTACTCAGTTAGGATGACCATTGATGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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| CDS CAA 90 bp | GTCATGACCATGAAGTCACCAAATGGGGTAGAGATGATTTCAGTTTaGTTGTTCACGCCTGTAAAATCAAATTCCAATAGCTTCCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VMTMKSPNGVEMISV*LFTPVKSNSNSFQV Trigger: CACTTGGAAGCTATTGGAATTTGATTTTACAGGCGTGAACAACAAAACTGAAATCATCTCTACCCCATTTGGTGACTTCATGGTCATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064780.4 |
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