Pregenerated sensors for GABRD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029054Ensembl transcript IDs: ENSMUST00000030925.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGTCAAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATaGCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: QVKALFHAGTKEASQ*PSPPGHRESGHPPP Trigger: TGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTTGACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR CCA 90 bp | CTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTaGCAACCACCTCACGTGGTATGTGTACAGCCATCACCTGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LCPILGPMERASRSL*QPPHVVCVQPSPGA Trigger: TGCACCAGGTGATGGCTGTACACATACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR TCA 90 bp | TGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTaGGAGTGGTCATCCACCCCCACTGTTTTTCTCTCTGATCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: WDQRGLAMPFSSRSP*EWSSTPTVFLSDPD Trigger: ATCAGGATCAGAGAGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR CAA 90 bp | CCTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTaGTGGCAACCACCTCACGTGGTATGTGTACAGCCATCACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PLCPILGPMERASRS*WQPPHVVCVQPSPG Trigger: ACCAGGTGATGGCTGTACACATACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAAACTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACTTCAGGGTCCTCTCTGTCCCATTTTaGGACCCATGGAGAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LKLHSSQGPSSTRLNFRVLSVPF*DPWRGP Trigger: AGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAG...GACCCTGAAGTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR-3UTR CCA 90 bp | CTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGGCCATTTTGGGACCCATaGAGAGGGCCTCCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LILIPQRKGLEIRTILMWPFWDP*RGPPGV Trigger: AACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGG...CCACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR-3UTR CAA 90 bp | CCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACCCTCTCTGTCCCATTTaGGGACCCATGGAGAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PRNALLLQVTVRVVIHPHPLCPI*GPMERA Trigger: GGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGG...GTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR TCA 72 bp | AGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTaGGAGTGGTCATCCACCCCCACTGTTTTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: RGLAMPFSSRSP*EWSSTPTVFLS Trigger: AGAGAGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR GCA 72 bp | GCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATaGCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: ALFHAGTKEASQ*PSPPGHRESGH Trigger: ATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR CCA 72 bp | ATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTaGCAACCACCTCACGTGGTATGTGTACAGCCATCA | + |
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Preference number: 3 (lower is better) Translates to: ILGPMERASRSL*QPPHVVCVQPS Trigger: TGATGGCTGTACACATACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACGCCCTGGCGCCATGGTaGGGCTGCGTGCAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSVPFWDPWRGPPGVCGNALAPW*GCVQSS Trigger: GCTGCTCTGCACGCAGCCGCACCATGGCGCCAGGGC...GTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACGGAACGGATTCCTCCTaGGCCCCCTGGGCGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: LSVPFWDPWRGPPGVCGNGTDSS*APWAGP Trigger: GGGTCCCGCCCAGGGGGCCCAGGAGGAATCCGTTCC...GTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | CCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACCTGTCCCGCCAGCTCTaGTGCAGGAACACAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: PRNALLLQVTVRVVIHPHLSRQL*CRNTVM Trigger: CATGACTGTGTTCCTGCATCAGAGCTGGCGGGACAG...GTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTACCTATAGGAACCCATaGGGTTCCCAGGGACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: AGTKEASQCPSPPGHRESTYRNP*GSQGPG Trigger: GCCGGGTCCCTGGGAACCTCATGGGTTCCTATAGGT...ACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACGCAGGCACGGCTGCCTaGCTAATCCAGAAGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LSVPFWDPWRGPPGVCGNAGTAA*LIQKET Trigger: GGTCTCCTTCTGGATTAGCCAGGCAGCCGTGCCTGC...GTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | GCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACTGTTTTTCTGAGATAGCCAACTCCTaGCTGACCCCAGCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ALLLQVTVRVVIHPHCFSEIANS*LTPAAE Trigger: CTCAGCTGCTGGGGTCAGTCAGGAGTTGGCTATCTC...AGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACGGTTGTAGGACAGCCTaGTGTCCCGCCAGCTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSVPFWDPWRGPPGVCGNGCRTA*CPASSD Trigger: ATCAGAGCTGGCGGGACAGCAGGCTGTCCTACAACC...GTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | GCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACTGTTTTTCTTCTGGCAGGCACGGCTaGCTGGCTAATCCAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: ALLLQVTVRVVIHPHCFSSGRHG*LANPEG Trigger: TCCTTCTGGATTAGCCAGGCAGCCGTGCCTGCCAGA...AGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | TTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTCACGTGGTACTGAGCCGTGGGAACTaGCCAGCCGATTTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGPMERASRSLWQPPHVVLSRGN*PADLKF Trigger: GAACTTCAAATCGGCTGGCCAGTTCCCACGGCTCAG...TACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACGGGAGAAAAGGACGATaGCGTTCCTCACATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PRNALLLQVTVRVVIHPHGRKGR*RSSHPS Trigger: AGATGGATGTGAGGAACGCCATCGTCCTTTTCTCCC...GTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR CAA 72 bp | AAAGCCCAAGAAGCCGAGCCTCCTCTCTGTCCCATTTaGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: KAQEAEPPLCPI*GPMERASRSLW Trigger: CCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGGAGGCTCGGCTTCTTGGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | CTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTGATTGAAGTGGGCAAATaGATACTCCACCAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGPKRPRNALLLQVTVRVIEVGK*ILHQGS Trigger: GCTGCCCTGGTGGAGTATGCATTTGCCCACTTCAAT...CACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | CCTCCTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCCTCACATCCATCTCTaGCCTTGGCTTGGTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: PPLCPILGPMERASRSLWPHIHL*PWLGDL Trigger: AAGGTCACCAAGCCAAGGGCAGAGATGGATGTGAGG...CCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | TTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTCACGTGGTAGGCCTAAGGTCTCGTTaGTATGGTTGTAGGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGPMERASRSLWQPPHVVGLRSR*YGCRTA Trigger: GGCTGTCCTACAACCATACCAACGAGACCTTAGGCC...TACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | GATGTGGGTCTAAAACTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACAGGAGACCCAGGACATaGCAACCAGGAGGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DVGLKLHSSQGPSSTRLNRRPRT*QPGGQR Trigger: CCTCTGTCCTCCTGGTTGCCATGTCCTGGGTCTCCT...GTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAGTTTTAGACCCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| 3UTR CAA 72 bp | CCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTaGTGGCAACCACCTCACGTGGTATGTGTACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PILGPMERASRS*WQPPHVVCVQP Trigger: TGGCTGTACACATACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | CCTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAATCCAGCATGCACTCCTaGTCATCCAGTGGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: PLCPILGPMERASRSLWQSSMHS*SSSGYL Trigger: CAAGTACCCACTGGATGAGCAGGAGTGCATGCTGGA...TTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACTTCAGGGTCAGGCCATTAAGCCATCCAGGTTaGGGAGCCAGGATATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LHSSQGPSSTRLNFRVRPLSHPG*GARIFP Trigger: TGGAAATATCCTGGCTCCCCAACCTGGATGGCTTAA...TGGCCTGACCCTGAAGTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTAAAACTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACTTCAGGGTCCATCCAGTGGGTACTTaGCGAGGTCCATGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LKLHSSQGPSSTRLNFRVHPVGT*RGPCHR Trigger: CCTGTGACATGGACCTCGCCAAGTACCCACTGGATG...GACCCTGAAGTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | CTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGGGCTGGAAGTGTAAGCTaGGCCGTGGGAACTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LILIPQRKGLEIRTILMWAGSVS*AVGTGQ Trigger: CTGGCCAGTTCCCACGGCTCAGCTTACACTTCCAGC...CCACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCACAGAGCTTTGATAGCTaGAGCCCGTGGCAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KALFHAGTKEASQCPSPPQSFDS*SPWQGG Trigger: TCCTCCCTGCCACGGGCTTCAGCTATCAAAGCTCTG...TGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | TCTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGGTGAACTGGGCCAGCTaGAGCCTGTCCAGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: SDPDPTEKRPRNQDHPDVVNWAS*SLSSPW Trigger: CCATGGGCTGGACAGGCTGCAGCTGGCCCAGTTCAC...CACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | TTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTTTCCATGTTTGCCTCTaGGATATGGTCAATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FHAGTKEASQCPSPPGHRFHVCL*DMVNAG Trigger: GCCAGCATTGACCATATCTCAGAGGCAAACATGGAA...ACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAGGTCACCGTGAGAGTCTGCTCCTGGTTTTCTaGCCAATAATAGACAATGTC | + |
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Preference number: 4 (lower is better) Translates to: AGTKEASQCPSPPGHRESLLLVF*PIIDNV Trigger: GACATTGTCTATTATTGGTCAGAAAACCAGGAGCAG...ACTCTCACGGTGACCTGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAACTGACCCCAGCAGCTaGGAGGGAGAAAAGGACGAT | + |
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Preference number: 4 (lower is better) Translates to: KALFHAGTKEASQCPSPPTDPSS*EGEKDD Trigger: ATCGTCCTTTTCTCCCTCTCAGCTGCTGGGGTCAGT...TGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTAAAACTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACTTCAGGGTCAGGATATTTCCAGGTTaGAGCCCACGTAGTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKLHSSQGPSSTRLNFRVRIFPG*SPRSPQ Trigger: TTGGGGACTACGTGGGCTCCAACCTGGAAATATCCT...GACCCTGAAGTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAGTTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | TGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTTTTGCCTCTGAGATATaGTCAATGCTGGCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: CPILGPMERASRSLWQPPFASEI*SMLATS Trigger: AGAGGTGGCCAGCATTGACCATATCTCAGAGGCAAA...AGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | CTAAAACTTCACAGCTCCCAAGGGCCCAGCAGCACTAGGCTCAACTTCAGGGTCATCCATCTCTGCCCTTaGCTTGGTGACCTTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: LKLHSSQGPSSTRLNFRVIHLCP*LGDLDL Trigger: AAGGTCAAGGTCACCAAGCCAAGGGCAGAGATGGAT...GACCCTGAAGTTGAGCCTAGTGCTGCTGGGCCCTTGGGAGCTGTGAAGTTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CCA 90 bp | TCTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGCTGGTGATAGTGAACTaGGCCAGCTGCAGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SDPDPTEKRPRNQDHPDVLVIVN*ASCSLS Trigger: GGACAGGCTGCAGCTGGCCCAGTTCACTATCACCAG...CACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR TCA 90 bp | GGTCAAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCTGTAGTCGGCATTaGAGTGGGCAAATGCATACT | + |
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Preference number: 4 (lower is better) Translates to: GQGFISCWDQRGLAMPFSSCSRH*SGQMHT Trigger: AGTATGCATTTGCCCACTTCAATGCCGACTACAGGA...GGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR GCA 90 bp | TCTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGTCTCTAGGTCCAGCATaGACTCCTGCTCATCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SDPDPTEKRPRNQDHPDVSLGPA*TPAHPV Trigger: CACTGGATGAGCAGGAGTGCATGCTGGACCTAGAGA...CACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 90 bp | AGACGGCGCGGGCATAGATGTCGATGGTGTCTGCATCGATGGGTTTaGGTCTGGAACGGATTCCTCCTGGGCCCCCTGGGCGGGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: RRRGHRCRWCLHRWV*VWNGFLLGPLGGTP Trigger: GGGGGTCCCGCCCAGGGGGCCCAGGAGGAATCCGTTCCAGACTCAAACCCATCGATGCAGACACCATCGACATCTATGCCCGCGCCGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | GCCGAGCCTCCTCTCTGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTATCTCTGCCCTTGGCTaGGTGACCTTGACCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: AEPPLCPILGPMERASRSISALG*VTLTLA Trigger: AGCCAAGGTCAAGGTCACCAAGCCAAGGGCAGAGAT...ACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACAGAGAGGAGGCTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 90 bp | CATGGTGTACGCCGCCCAGTAGATGATGTTGACCGCTGCAAAAGCTaGCGGGAAGACGGCGCGGGCATAGATGTCGATGGTGTCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: HGVRRPVDDVDRCKS*REDGAGIDVDGVCI Trigger: GATGCAGACACCATCGACATCTATGCCCGCGCCGTCTTCCCGGCAGCTTTTGCAGCGGTCAACATCATCTACTGGGCGGCGTACACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | TGTCCCATTTTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTCCCCAATGTCATTCATaGCCCTGGCGCCATGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: CPILGPMERASRSLWQPPPQCHS*PWRHGA Trigger: CGCACCATGGCGCCAGGGCAATGAATGACATTGGGG...AGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAAAATGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 90 bp | GCCTTGACGACGGGAGATAGCCAACTCCTGACTGACCCCAGCAGCTaGGAGGGAGAAAAGGACGATGGCGTTCCTCACATCCATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALTTGDSQLLTDPSS*EGEKDDGVPHIHLC Trigger: GCAGAGATGGATGTGAGGAACGCCATCGTCCTTTTCTCCCTCTCAGCTGCTGGGGTCAGTCAGGAGTTGGCTATCTCCCGTCGTCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 90 bp | TGGCCACCTCTAGGGCAAGCGCCACATTCACAGGAGCACCTCCAATaGCTGGTCGGAAGTTTCGGGCATAGCCCTCCATTAAGCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: WPPLGQAPHSQEHLQ*LVGSFGHSPPLSHP Trigger: TGGATGGCTTAATGGAGGGCTATGCCCGAAACTTCCGACCAGGCATTGGAGGTGCTCCTGTGAATGTGGCGCTTGCCCTAGAGGTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 90 bp | GCCATAGCTTGTCCACAAAGCGGCTGTCCAGGCCTAAGGTCTCGTTaGTATGGTTGTAGGACAGCCTGCTGTCCCGCCAGCTCTGATGCA | + |
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Preference number: 5 (lower is better) Translates to: AIACPQSGCPGLRSR*YGCRTACCPASSDA Trigger: TGCATCAGAGCTGGCGGGACAGCAGGCTGTCCTACAACCATACCAACGAGACCTTAGGCCTGGACAGCCGCTTTGTGGACAAGCTATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 90 bp | CCAGTGGGTACTTGGCGAGGTCCATGTCACAGGCCACTGTGGAGGTaGTGCGGATGCTGTATAAAATCACCCCATCAGGCTGTAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: PVGTWRGPCHRPLWR*CGCCIKSPHQAVGG Trigger: TCCGCCTACAGCCTGATGGGGTGATTTTATACAGCATCCGCATCACCTCCACAGTGGCCTGTGACATGGACCTCGCCAAGTACCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 90 bp | CTGGTCGGAAGTTTCGGGCATAGCCCTCCATTAAGCCATCCAGGTTaGGGAGCCAGGATATTTCCAGGTTGGAGCCCACGTAGTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LVGSFGHSPPLSHPG*GARIFPGWSPRSPQ Trigger: TTGGGGACTACGTGGGCTCCAACCTGGAAATATCCTGGCTCCCCAACCTGGATGGCTTAATGGAGGGCTATGCCCGAAACTTCCGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | TTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTCACGTGGTACTTGGCTTGGTGACCTaGACCTTGGCTTTCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LGPMERASRSLWQPPHVVLGLVT*TLAFRF Trigger: GAAACGGAAAGCCAAGGTCAAGGTCACCAAGCCAAG...TACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 90 bp | GGCTGTCCAGGCCTAAGGTCTCGTTGGTATGGTTGTAGGACAGCCTaGTGTCCCGCCAGCTCTGATGCAGGAACACAGTCATGGTGTATT | + |
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Preference number: 5 (lower is better) Translates to: GCPGLRSRWYGCRTA*CPASSDAGTQSWCI Trigger: AATACACCATGACTGTGTTCCTGCATCAGAGCTGGCGGGACAGCAGGCTGTCCTACAACCATACCAACGAGACCTTAGGCCTGGACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 90 bp | CCTCCATTAAGCCATCCAGGTTGGGGAGCCAGGATATTTCCAGGTTaGAGCCCACGTAGTCCCCAATGTCATTCATTGCCCTGGCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: PPLSHPGWGARIFPG*SPRSPQCHSLPWRH Trigger: ATGGCGCCAGGGCAATGAATGACATTGGGGACTACGTGGGCTCCAACCTGGAAATATCCTGGCTCCCCAACCTGGATGGCTTAATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | GCCCTTCTCCTCCAGGTCACCGTGAGAGTGGTCATCCACCCCCACTGTTTTTCTTACACATCCAGAGCTTaGATAGCTGAAGCCCGTGGC | + |
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Preference number: 5 (lower is better) Translates to: ALLLQVTVRVVIHPHCFSYTSRA*IAEARG Trigger: GCCACGGGCTTCAGCTATCAAAGCTCTGGATGTGTA...AGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGGAGGAGAAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 90 bp | GAGGGAGAAAAGGACGATGGCGTTCCTCACATCCATCTCTGCCCTTaGCTTGGTGACCTTGACCTTGGCTTTCCGTTTCTTCCTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: EGEKDDGVPHIHLCP*LGDLDLGFPFLPVV Trigger: GACTACAGGAAGAAACGGAAAGCCAAGGTCAAGGTCACCAAGCCAAGGGCAGAGATGGATGTGAGGAACGCCATCGTCCTTTTCTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | TTGGGACCCATGGAGAGGGCCTCCAGGAGTTTGTGGCAACCACCTCACGTGGTATGTAGGCGGATAAGCTaGTTTTCCACAGTCACATCA | + |
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Preference number: 5 (lower is better) Translates to: LGPMERASRSLWQPPHVVCRRIS*FSTVTS Trigger: TGATGTGACTGTGGAAAACAAGCTTATCCGCCTACA...TACCACGTGAGGTGGTTGCCACAAACTCCTGGAGGCCCTCTCCATGGGTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | CCAGGTCACCGTGAGAGTGGTCATCCACCCCCACTGTTTTTCTCTCTGATCCTGTTGGTGACCTTGACCTaGGCTTTCCGTTTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGHRESGHPPPLFFSLILLVTLT*AFRFFL Trigger: CAGGAAGAAACGGAAAGCCAAGGTCAAGGTCACCAA...CAGGATCAGAGAGAAAAACAGTGGGGGTGGATGACCACTCTCACGGTGACCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 90 bp | ACACAGTCATGGTGTATTCCATGTTTGCCTCTGAGATATGGTCAATaGTGGCCACCTCTAGGGCAAGCGCCACATTCACAGGAGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: TQSWCIPCLPLRYGQ*WPPLGQAPHSQEHL Trigger: GAGGTGCTCCTGTGAATGTGGCGCTTGCCCTAGAGGTGGCCAGCATTGACCATATCTCAGAGGCAAACATGGAATACACCATGACTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 90 bp | CAGTCATGGTGTATTCCATGTTTGCCTCTGAGATATGGTCAATGCTaGCCACCTCTAGGGCAAGCGCCACATTCACAGGAGCACCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QSWCIPCLPLRYGQC*PPLGQAPHSQEHLQ Trigger: TTGGAGGTGCTCCTGTGAATGTGGCGCTTGCCCTAGAGGTGGCCAGCATTGACCATATCTCAGAGGCAAACATGGAATACACCATGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | AAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAAACTGGCCAGCCGATTaGAAGTTCATCAGCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: KALFHAGTKEASQCPSPPNWPAD*KFISSV Trigger: CACGGAGCTGATGAACTTCAAATCGGCTGGCCAGTT...TGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 90 bp | TTTCCACAGTCACATCATGGAACCAGGCAGATTTGGCATTCACGATaGAGGTGTCAGGGAGCCATAGCTTGTCCACAAAGCGGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: FPQSHHGTRQIWHSR*RCQGAIACPQSGCP Trigger: TGGACAGCCGCTTTGTGGACAAGCTATGGCTCCCTGACACCTTCATCGTGAATGCCAAATCTGCCTGGTTCCATGATGTGACTGTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | AAGGCTTTATTTCATGCTGGGACCAAAGAGGCCTCGCAATGCCCTTCTCCTCCAATTAAGCCATCCAGGTaGGGGAGCCAGGATATTTCC | + |
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Preference number: 5 (lower is better) Translates to: KALFHAGTKEASQCPSPPIKPSR*GSQDIS Trigger: GGAAATATCCTGGCTCCCCAACCTGGATGGCTTAAT...TGGAGGAGAAGGGCATTGCGAGGCCTCTTTGGTCCCAGCATGAAATAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | CCCACTGTTTTTCTCTCTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGTGGAACCAGGCAGATTaGGCATTCACGATGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PTVFLSDPDPTEKRPRNQWNQAD*AFTMKV Trigger: CACCTTCATCGTGAATGCCAAATCTGCCTGGTTCCA...CTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAGAGAGAAAAACAGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS-3UTR CAA 90 bp | TCTGATCCTGATCCCACAGAGAAAAGGCCTAGAAATCAGGACCATCCTGATGTGTGGTGTATTCCATGTTaGCCTCTGAGATATGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: SDPDPTEKRPRNQDHPDVWCIPC*PLRYGQ Trigger: TTGACCATATCTCAGAGGCAAACATGGAATACACCA...CACATCAGGATGGTCCTGATTTCTAGGCCTTTTCTCTGTGGGATCAGGATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | CAGGTTGGAGCCCACGTAGTCCCCAATGTCATTCATTaGCCTGGCGCCATGGTGCGGCTGCGTGCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QVGAHVVPNVIH*PGAMVRLRAEQ Trigger: CTGCTCTGCACGCAGCCGCACCATGGCGCCAGGGCAATGAATGACATTGGGGACTACGTGGGCTCCAACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | TGGAGCCCACGTAGTCCCCAATGTCATTCATTGCCCTaGCGCCATGGTGCGGCTGCGTGCAGAGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WSPRSPQCHSLP*RHGAAACRAAG Trigger: TCCTGCTGCTCTGCACGCAGCCGCACCATGGCGCCAGGGCAATGAATGACATTGGGGACTACGTGGGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 72 bp | CCAGGTTGGAGCCCACGTAGTCCCCAATGTCATTCATaGCCCTGGCGCCATGGTGCGGCTGCGTGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PGWSPRSPQCHS*PWRHGAAACRA Trigger: TGCTCTGCACGCAGCCGCACCATGGCGCCAGGGCAATGAATGACATTGGGGACTACGTGGGCTCCAACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | CGCCGCCCAGTAGATGATGTTGACCGCTGCAAAAGCTaGCGGGAAGACGGCGCGGGCATAGATGTCGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RRPVDDVDRCKS*REDGAGIDVDG Trigger: ACCATCGACATCTATGCCCGCGCCGTCTTCCCGGCAGCTTTTGCAGCGGTCAACATCATCTACTGGGCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 90 bp | AGGATATTTCCAGGTTGGAGCCCACGTAGTCCCCAATGTCATTCATaGCCCTGGCGCCATGGTGCGGCTGCGTGCAGAGCAGCAGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RIFPGWSPRSPQCHS*PWRHGAAACRAAGA Trigger: CGCTCCTGCTGCTCTGCACGCAGCCGCACCATGGCGCCAGGGCAATGAATGACATTGGGGACTACGTGGGCTCCAACCTGGAAATATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 72 bp | GGGCATAGATGTCGATGGTGTCTGCATCGATGGGTTTaGGTCTGGAACGGATTCCTCCTGGGCCCCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GHRCRWCLHRWV*VWNGFLLGPLG Trigger: GCCCAGGGGGCCCAGGAGGAATCCGTTCCAGACTCAAACCCATCGATGCAGACACCATCGACATCTATGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | CATGGTGTACGCCGCCCAGTAGATGATGTTGACCGCTaGAAAAGCTGCCGGGAAGACGGCGCGGGCATAGAT | + |
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Preference number: 6 (lower is better) Translates to: HGVRRPVDDVDR*KSCREDGAGID Trigger: ATCTATGCCCGCGCCGTCTTCCCGGCAGCTTTTGCAGCGGTCAACATCATCTACTGGGCGGCGTACACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | TGTCCACAAAGCGGCTGTCCAGGCCTAAGGTCTCGTTaGTATGGTTGTAGGACAGCCTGCTGTCCCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CPQSGCPGLRSR*YGCRTACCPAS Trigger: GCTGGCGGGACAGCAGGCTGTCCTACAACCATACCAACGAGACCTTAGGCCTGGACAGCCGCTTTGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 72 bp | AGGTCCAGCATGCACTCCTGCTCATCCAGTGGGTACTaGGCGAGGTCCATGTCACAGGCCACTGTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSSMHSCSSSGY*ARSMSQATVEV Trigger: CACCTCCACAGTGGCCTGTGACATGGACCTCGCCAAGTACCCACTGGATGAGCAGGAGTGCATGCTGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 72 bp | TCTTTGCCTCCACTTCCACAGACCTATAGGAACCCATaGGGTTCCCAGGGACCCGGCCTTGACGACGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SLPPLPQTYRNP*GSQGPGLDDGR Trigger: TCTCCCGTCGTCAAGGCCGGGTCCCTGGGAACCTCATGGGTTCCTATAGGTCTGTGGAAGTGGAGGCAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | CTAGGGCAAGCGCCACATTCACAGGAGCACCTCCAATaGCTGGTCGGAAGTTTCGGGCATAGCCCTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: LGQAPHSQEHLQ*LVGSFGHSPPL Trigger: TAATGGAGGGCTATGCCCGAAACTTCCGACCAGGCATTGGAGGTGCTCCTGTGAATGTGGCGCTTGCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | GGCCTAAGGTCTCGTTGGTATGGTTGTAGGACAGCCTaGTGTCCCGCCAGCTCTGATGCAGGAACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLRSRWYGCRTA*CPASSDAGTQS Trigger: TGACTGTGTTCCTGCATCAGAGCTGGCGGGACAGCAGGCTGTCCTACAACCATACCAACGAGACCTTAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | AGCCATCCAGGTTGGGGAGCCAGGATATTTCCAGGTTaGAGCCCACGTAGTCCCCAATGTCATTCATTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SHPGWGARIFPG*SPRSPQCHSLP Trigger: GGGCAATGAATGACATTGGGGACTACGTGGGCTCCAACCTGGAAATATCCTGGCTCCCCAACCTGGATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | AGTTTCGGGCATAGCCCTCCATTAAGCCATCCAGGTTaGGGAGCCAGGATATTTCCAGGTTGGAGCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: SFGHSPPLSHPG*GARIFPGWSPR Trigger: ACGTGGGCTCCAACCTGGAAATATCCTGGCTCCCCAACCTGGATGGCTTAATGGAGGGCTATGCCCGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 72 bp | TTGGCATTCACGATGAAGGTGTCAGGGAGCCATAGCTaGTCCACAAAGCGGCTGTCCAGGCCTAAGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LAFTMKVSGSHS*STKRLSRPKVS Trigger: CGAGACCTTAGGCCTGGACAGCCGCTTTGTGGACAAGCTATGGCTCCCTGACACCTTCATCGTGAATGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 90 bp | CAGGCAGATTTGGCATTCACGATGAAGGTGTCAGGGAGCCATAGCTaGTCCACAAAGCGGCTGTCCAGGCCTAAGGTCTCGTTGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: QADLAFTMKVSGSHS*STKRLSRPKVSLVW Trigger: CCATACCAACGAGACCTTAGGCCTGGACAGCCGCTTTGTGGACAAGCTATGGCTCCCTGACACCTTCATCGTGAATGCCAAATCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 72 bp | ACTTGGCGAGGTCCATGTCACAGGCCACTGTGGAGGTaGTGCGGATGCTGTATAAAATCACCCCATCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TWRGPCHRPLWR*CGCCIKSPHQA Trigger: AGCCTGATGGGGTGATTTTATACAGCATCCGCATCACCTCCACAGTGGCCTGTGACATGGACCTCGCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CAA 72 bp | ACGATGGCGTTCCTCACATCCATCTCTGCCCTTGGCTaGGTGACCTTGACCTTGGCTTTCCGTTTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TMAFLTSISALG*VTLTLAFRFFL Trigger: CAGGAAGAAACGGAAAGCCAAGGTCAAGGTCACCAAGCCAAGGGCAGAGATGGATGTGAGGAACGCCATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS GCA 72 bp | TGGTGTATTCCATGTTTGCCTCTGAGATATGGTCAATaGTGGCCACCTCTAGGGCAAGCGCCACATTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WCIPCLPLRYGQ*WPPLGQAPHSQ Trigger: CTGTGAATGTGGCGCTTGCCCTAGAGGTGGCCAGCATTGACCATATCTCAGAGGCAAACATGGAATACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | ACAGTCATGGTGTATTCCATGTTTGCCTCTGAGATATaGTCAATGCTGGCCACCTCTAGGGCAAGCGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TVMVYSMFASEI*SMLATSRASAT Trigger: TGTGGCGCTTGCCCTAGAGGTGGCCAGCATTGACCATATCTCAGAGGCAAACATGGAATACACCATGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 72 bp | TCACATCATGGAACCAGGCAGATTTGGCATTCACGATaGAGGTGTCAGGGAGCCATAGCTTGTCCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHHGTRQIWHSR*RCQGAIACPQS Trigger: GCTTTGTGGACAAGCTATGGCTCCCTGACACCTTCATCGTGAATGCCAAATCTGCCTGGTTCCATGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS TCA 72 bp | CAGCCTGTCCAGCCCATGGATCTGCTCCTGGTTTTCTaGCCAATAATAGACAATGTCCTCAGAAGAGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPVQPMDLLLVF*PIIDNVLRRVA Trigger: GGCTACTCTTCTGAGGACATTGTCTATTATTGGTCAGAAAACCAGGAGCAGATCCATGGGCTGGACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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| CDS CCA 72 bp | TGCTGTCCCGCCAGCTCTGATGCAGGAACACAGTCATaGTGTATTCCATGTTTGCCTCTGAGATATGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CCPASSDAGTQS*CIPCLPLRYGQ Trigger: TTGACCATATCTCAGAGGCAAACATGGAATACACCATGACTGTGTTCCTGCATCAGAGCTGGCGGGACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030925.3 |
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