Pregenerated sensors for GABRB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033676Ensembl transcript IDs: ENSMUST00000039697.14, ENSMUST00000085240.11, ENSMUST00000138350.2, ENSMUST00000196198.5
Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCACATGCCTCCTGGGGAGGGTGGTGGTGCTGCCTGCCTATGTaGAAAAACGATGGCGCCAGACTTGAAGGTGCCGCGTGTGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: CPHASWGGWWCCLPM*KNDGARLEGAACVG Trigger: TCCCACACACGCGGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR GCA 90 bp | ATGGTGACTGTCCACATGCCTCCTGGGGAGGGTGGTGGTGCTGCCTaGCTATGTGGAAAAACGATGGCGCCAGACTTGAAGGTGCCGCGT | + |
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Preference number: 1 (lower is better) Translates to: MVTVHMPPGEGGGAA*LCGKTMAPDLKVPR Trigger: ACGCGGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACAGTCACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR GCA 90 bp | GTCCATGGTGACTGTCCACATGCCTCCTGGGGAGGGTGGTGGTGCTaGCTGCCTATGTGGAAAAACGATGGCGCCAGACTTGAAGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: VHGDCPHASWGGWWC*LPMWKNDGARLEGA Trigger: GGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACAGTCACCATGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | GTAGTGTCAGTCCATGGTGACTGTCCACATGCCTCCTGGGGAGGGTaGTGGTGCTGCCTGCCTATGTGGAAAAACGATGGCGCCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: VVSVHGDCPHASWGG*WCCLPMWKNDGARL Trigger: AAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACAGTCACCATGGACTGACACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR GCA 90 bp | TTATCCAGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTaGGGGGTCTCTGCCTTGATATGTGGGTATCTCAACTATGCATCA | + |
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Preference number: 1 (lower is better) Translates to: LSRDSPGVHCCSSEP*GVSALICGYLNYAS Trigger: TGATGCATAGTTGAGATACCCACATATCAAGGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCTGGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | GAGCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTaGAATCCCTCTGTACCCTCACTTACTGACTCAAATGGCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: ELWTWVTATSIQRSW*NPSVPSLTDSNGCC Trigger: ACAGCAGCCATTTGAGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR TCA 90 bp | GAAACAAGCCCATCACAGAGAAGCCAACAAGCCTCGGTTGCAAACTaGGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: ETSPSQRSQQASVAN*EGMRCTTTAVGVPK Trigger: TTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTCTGTGATGGGCTTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | TCCTTGCCTCAGAAACGGTCATGGGTTGTTGTGTGGTGTGTAGACTaGAAGTGTTCCTGCAGAATTCTAGTCAGTCTAGGAGGAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SLPQKRSWVVVWCVD*KCSCRILVSLGGAG Trigger: CCCAGCTCCTCCTAGACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR GCA 90 bp | AAACGGTCATGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTaGAGAATTCTAGTCAGTCTAGGAGGAGCTGGGTGTGCTTATGAG | + |
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Preference number: 1 (lower is better) Translates to: KRSWVVVWCVDWKCS*RILVSLGGAGCAYE Trigger: CTCATAAGCACACCCAGCTCCTCCTAGACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCATGACCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | GAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATaGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATT | + |
|
Preference number: 1 (lower is better) Translates to: ETICVRLLSLPQKRS*VVVWCVDWKCSCRI Trigger: AATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | TGCAGTAGAAGAGGTAATCAGTCCAAGGTACACTCACCAGTGTCCTaGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: CSRRGNQSKVHSPVS*EIYSTRAVLCPKSQ Trigger: TTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCAGGACACTGGTGAGTGTACCTTGGACTGATTACCTCTTCTACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR GCA 90 bp | GAGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTaGATTTTGGAGTTCCTTGTCTACCTGTGGCACTTACACCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: EYNKLSASDCFCHTA*ILEFLVYLWHLHLE Trigger: CTCAAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR TCA 90 bp | TTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTaGTGGAAAGTTCACACTGACATGAAGTCAGAGTTCATTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LLHQGSSLPKESMLL*WKVHTDMKSEFIPK Trigger: TTTTGGAATGAACTCTGACTTCATGTCAGTGTGAACTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR CCA 90 bp | CTGAAGATGTCCCCGTGTTGGCATCAAAACACACAATACTGCAGATaGACATGTCACTTAAAGCCTAGTGGGAACATTATTATGATATAC | + |
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Preference number: 1 (lower is better) Translates to: LKMSPCWHQNTQYCR*TCHLKPSGNIIMIY Trigger: GTATATCATAATAATGTTCCCACTAGGCTTTAAGTGACATGTCCATCTGCAGTATTGTGTGTTTTGATGCCAACACGGGGACATCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR GCA 90 bp | TCTAGATGGTTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATaGTTCCAGTTAAATAGCAGACCTAGAAATCTGGATGAGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: SRWFYLRVTKNLRRL*FQLNSRPRNLDEMW Trigger: CCACATCTCATCCAGATTTCTAGGTCTGCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAACCATCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR GCA 90 bp | TATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTaGAGTCGGTTTATGGATGCCTGTGATAGAAATAGTTTACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: YPVFQMLRCDTRLHN*SRFMDACDRNSLQK Trigger: TTTTTGTAAACTATTTCTATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | CTATGCTTCCAGTTAAATAGCAGACCTAGAAATCTGGATGAGATGTaGAGCACACTTCTAGCGATTGAATGTCATTATCAAAATGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LCFQLNSRPRNLDEM*STLLAIECHYQNVP Trigger: TGGCACATTTTGATAATGACATTCAATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAACTGGAAGCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | GAGTCTAGCTACTATGGTAACTTCATTACAGTGTCTATAAAGTTGTaGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: ESSYYGNFITVSIKL*IPVLVPNAYKKLKS Trigger: GCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAACTTTATAGACACTGTAATGAAGTTACCATAGTAGCTAGACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR TCA 90 bp | CTGTGGCACTTACACCTTGAGTTACAGGATACAGAGAGAGATACCTaGATTATTGAAAGGGATAAGGTCTTTGCAAACATTTGTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: LWHLHLELQDTERDT*IIERDKVFANICIL Trigger: AAGAATACAAATGTTTGCAAAGACCTTATCCCTTTCAATAATTCAGGTATCTCTCTCTGTATCCTGTAACTCAAGGTGTAAGTGCCACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CCA 90 bp | ATGAATTATAGTAGGCTTATGCTTTTAAGCAAGGAGATTCAACAATaGACACATCTTTTCAGAATGTGTTTCCGTGGTTCAAACACCTAC | + |
|
Preference number: 1 (lower is better) Translates to: MNYSRLMLLSKEIQQ*THLFRMCFRGSNTY Trigger: GTAGGTGTTTGAACCACGGAAACACATTCTGAAAAGATGTGTCCATTGTTGAATCTCCTTGCTTAAAAGCATAAGCCTACTATAATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCTGCTGCCTGCCTATGTaGAAAAACGATGGCGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RDSPGVHCCSSEPCGVSACCLPM*KNDGAR Trigger: TCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCA...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTCCTGGGGAGGGTGGTaGTGCTGCCTGCCTATGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALDMGNSHLHSEVLVESLSWGGW*CCLPMW Trigger: CCACATAGGCAGGCAGCACCACCACCCTCCCCAGGA...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCTTCTGCCACACTGCTTaGATTTTGGAGTTCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAFCHTA*ILEFLV Trigger: GACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAA...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCCACTGTGTTCCCACATaGCAGTTAAGCTGGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALDMGNSHLHSEVLVESLHCVPT*QLSWTH Trigger: GTGGGTCCAGCTTAACTGTCATGTGGGAACACAGTG...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCTCACGCCCTCATTCTTaGGGCATAATATTTAGATAC | + |
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Preference number: 2 (lower is better) Translates to: RDSPGVHCCSSEPCGVSASRPHS*GIIFRY Trigger: GTATCTAAATATTATGCCTCAAGAATGAGGGCGTGA...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCACTGCAGTCGGTTTATaGATGCCTGTGATAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: RDSPGVHCCSSEPCGVSATAVGL*MPVIEI Trigger: TATTTCTATCACAGGCATCCATAAACCGACTGCAGT...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CAA 90 bp | GGTGGTGGTGCTGCCTGCCTATGTGGAAAAACGATGGCGCCAGACTaGAAGGTGCCGCGTGTGTGGGATTTGGGGGTTATTAATTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GGGAACLCGKTMAPD*KVPRVWDLGVINLA Trigger: TGCTAAATTAATAACCCCCAAATCCCACACACGCGGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR GCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGTGCTCTTCTGAGCCCTaGGGGGTCTCTGCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: VIKASTPWALCEAFRFGKCSSEP*GVSALI Trigger: TATCAAGGCAGAGACCCCGCAGGGCTCAGAAGAGCA...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGCCTCCTGGGGAGGGTaGTGGTGCTGCCTGCCTATG | + |
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Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCASWGG*WCCLPM Trigger: CATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGC...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGACACACTTTGGGATaGCTGTGTTTCACGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQRHTLG*LCFTPS Trigger: TGAGGGCGTGAAACACAGTCATCCCAAAGTGTGTCT...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGCCTCGGTTGCAAACTaGGAGGGTATGAGGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: ILSSKCFAVTPVYITAVGASVAN*EGMRCT Trigger: TGTACACCTCATACCCTCTCAGTTTGCAACCGAGGC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCATAAAAGACACACTTTaGGATGACTGTGTTTCACGC | + |
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Preference number: 2 (lower is better) Translates to: ALDMGNSHLHSEVLVESLIKDTL*DDCVSR Trigger: GCGTGAAACACAGTCATCCCAAAGTGTGTCTTTTAT...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR CCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGGCCTCCTGGGGAGGGTaGTGGTGCTGCCTGCCTATG | + |
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Preference number: 2 (lower is better) Translates to: SIINYQPVTVSATLLAFWASWGG*WCCLPM Trigger: CATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGC...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTCACTGTGTTCCCACATaGCAGTTAAGCTGGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: WVVVWCVDWKCSCRILVSHCVPT*QLSWTH Trigger: GTGGGTCCAGCTTAACTGTCATGTGGGAACACAGTG...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTAGTGGCACTTACACCTTaGGTTACAGGATACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASTPWALCEAFRFGKTVLVALTP*VTGYRE Trigger: CTCTCTGTATCCTGTAACTCAAGGTGTAAGTGCCAC...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATGCACTGCTGCTCTTCTaGGCCCTGCGGGGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYALLLF*ALRGLC Trigger: GCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGC...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTTGCTCTTCTGAGCCCTaGGGGGTCTCTGCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCCSSEP*GVSALI Trigger: TATCAAGGCAGAGACCCCGCAGGGCTCAGAAGAGCA...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATCCGGGAGTGCACTGCTaGTCTTCTGAGCCCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYPGVHC*SSEPCG Trigger: CCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGG...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR CAA 90 bp | GATCAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTaGCCTCAGAAACGGTCATGGGTTGTTGTGTGGTGTGTAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: DQKEPKETICVRLLS*PQKRSWVVVWCVDW Trigger: CCAGTCTACACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATGAGACACACTTTGGGATaGCTGTGTTTCACGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TKRDYLCQVALLASETVMRHTLG*LCFTPS Trigger: TGAGGGCGTGAAACACAGTCATCCCAAAGTGTGTCT...CATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACACTGTGTTCCCACATaGCAGTTAAGCTGGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: QKEPKETICVRLLSLPQKHCVPT*QLSWTH Trigger: GTGGGTCCAGCTTAACTGTCATGTGGGAACACAGTG...TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| 3UTR-3UTR GCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTATATGACGTTGCATGCTaGCATGATAGCAAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASTPWALCEAFRFGKTVLYDVAC*HDSKQK Trigger: CTTCTGCTTGCTATCATGGCAGCATGCAACGTCATA...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGCTCTGCCTTGATATGTaGGTATCTCAACTATGCATC | + |
|
Preference number: 2 (lower is better) Translates to: VIKASTPWALCEAFRFGKLCLDM*VSQLCI Trigger: GATGCATAGTTGAGATACCCACATATCAAGGCAGAG...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR TCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTACAGAGAGAGATACCTaGATTATTGAAAGGGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTTERDT*IIERDK Trigger: CTTATCCCTTTCAATAATTCAGGTATCTCTCTCTGT...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTATGACGTTGCATGCTaGCATGATAGCAAGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ILSSKCFAVTPVYITAVGYDVAC*HDSKQK Trigger: CTTCTGCTTGCTATCATGGCAGCATGCAACGTCATA...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTACACCATGGGCCCTCTaGGAAGCATTTCGTTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCTPWAL*EAFRFG Trigger: TCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGT...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTGCAGACCTAGAAATCTaGATGAGATGTGGAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: WVVVWCVDWKCSCRILVSADLEI*MRCGAH Trigger: GTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGC...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTCACGCCCTCATTCTTaGGGCATAATATTTAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYSRPHS*GIIFRY Trigger: GTATCTAAATATTATGCCTCAAGAATGAGGGCGTGA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR TCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGAGAGAGATACCTaGATTATTGAAAGGGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VIKASTPWALCEAFRFGKTERDT*IIERDK Trigger: CTTATCCCTTTCAATAATTCAGGTATCTCTCTCTGT...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR GCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTAAACCTGAGACGTCTATaGTTCCAGTTAAATAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ASTPWALCEAFRFGKTVLNLRRL*FQLNSR Trigger: TCTGCTATTTAACTGGAAGCATAGACGTCTCAGGTT...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGACTGGAAGTGTTCCTaGAGAATTCTAGTCAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ILSSKCFAVTPVYITAVGDWKCS*RILVSL Trigger: TAGACTGACTAGAATTCTGCAGGAACACTTCCAGTC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGCAGACCTAGAAATCTaGATGAGATGTGGAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCADLEI*MRCGAH Trigger: GTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGC...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTATGTGGATCCCAGTCTTaGTGCCAAATGCATATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ASTPWALCEAFRFGKTVLCGSQS*CQMHIK Trigger: TTTTATATGCATTTGGCACCAAGACTGGGATCCACA...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGTGTTTGTATGTGTACTaGTATAAAAACTTGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VIKASTPWALCEAFRFGKCLYVY*YKNLTG Trigger: GCCTGTCAAGTTTTTATACCAGTACACATACAAACA...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGTACCATTGGTTCAGTTaGCTTACAGAAAATGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKYHWFS*LTENGQ Trigger: CTGGCCATTTTCTGTAAGCCAACTGAACCAATGGTA...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR CAA 90 bp | CTGCTTGCATTTTGGAGTTCCTTGTCTACCTGTGGCACTTACACCTaGAGTTACAGGATACAGAGAGAGATACCTGAATTATTGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLAFWSSLSTCGTYT*SYRIQREIPELLKG Trigger: CCCTTTCAATAATTCAGGTATCTCTCTCTGTATCCTGTAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 90 bp | AATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTaGGAGTTCCTTGTCTACCTGTGGCACTTACACCTTGAGTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: NKLSASDCFCHTACI*EFLVYLWHLHLELQ Trigger: CTGTAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 90 bp | AGGACAGCAACCGCCTATTCCTACGAGAACAATCCTGTACTTACCTaGAACACATCTACTGACTTGGGAAGTAGAAAAATGAGTCACGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTATAYSYENNPVLT*NTSTDLGSRKMSHE Trigger: TTCGTGACTCATTTTTCTACTTCCCAAGTCAGTAGATGTGTTCAAGGTAAGTACAGGATTGTTCTCGTAGGAATAGGCGGTTGCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATGCCTCGGTTGCAAACTaGGAGGGTATGAGGTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYASVAN*EGMRCT Trigger: TGTACACCTCATACCCTCTCAGTTTGCAACCGAGGC...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR GCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGAACCTGAGACGTCTATaGTTCCAGTTAAATAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKNLRRL*FQLNSR Trigger: TCTGCTATTTAACTGGAAGCATAGACGTCTCAGGTT...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGATAAAAGACACACTTTaGGATGACTGTGTTTCACGC | + |
|
Preference number: 2 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKIKDTL*DDCVSR Trigger: GCGTGAAACACAGTCATCCCAAAGTGTGTCTTTTAT...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGGAAACCACTCTAGATaGTTTTACCTTAGAGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: ILSSKCFAVTPVYITAVGGNHSR*FYLRVT Trigger: TGTTACTCTAAGGTAAAACCATCTAGAGTGGTTTCC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATGGAAACCACTCTAGATaGTTTTACCTTAGAGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LRCDTRLHNCSRFMDACDGNHSR*FYLRVT Trigger: TGTTACTCTAAGGTAAAACCATCTAGAGTGGTTTCC...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTTTCCTTGTCTACCTGTaGCACTTACACCTTGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCFLVYL*HLHLEL Trigger: TAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAA...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTAAGATGTCCCCGTGTTaGCATCAAAACACACAATAC | + |
|
Preference number: 2 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCKMSPC*HQNTQY Trigger: GTATTGTGTGTTTTGATGCCAACACGGGGACATCTT...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR CAA 90 bp | TTAAAGCCTAGTGGGAACATTATTATGATATACTCTTTAGTTCATTaGAGATTCAGGGGCAGTGAGGGTGTCACGGCATTGGCAACACAA | + |
|
Preference number: 2 (lower is better) Translates to: LKPSGNIIMIYSLVH*RFRGSEGVTALATQ Trigger: TTGTGTTGCCAATGCCGTGACACCCTCACTGCCCCTGAATCTCAAATGAACTAAAGAGTATATCATAATAATGTTCCCACTAGGCTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATGTGGCACTTACACCTTaGGTTACAGGATACAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYVALTP*VTGYRE Trigger: CTCTCTGTATCCTGTAACTCAAGGTGTAAGTGCCAC...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAAGCAGACCTAGAAATCTaGATGAGATGTGGAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RMKNMTLHAAMIASRRNKADLEI*MRCGAH Trigger: GTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGC...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTCACGCCCTCATTCTTaGGGCATAATATTTAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: SEYNKLSASDCFCHTACISRPHS*GIIFRY Trigger: GTATCTAAATATTATGCCTCAAGAATGAGGGCGTGA...AATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATAAATATGACGTTGCATaGTGCCATGATAGCAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYKYDVA*CHDSKQ Trigger: CTGCTTGCTATCATGGCAGCATGCAACGTCATATTT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGCAGAGAAAAGCCAAATaGCAAAATTCACAGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SIINYQPVTVSATLLAFWQRKAK*QNSQAH Trigger: ATGAGCCTGTGAATTTTGCCATTTGGCTTTTCTCTG...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATTTCCTTGTCTACCTGTaGCACTTACACCTTGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYFLVYL*HLHLEL Trigger: TAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAA...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGACAGAGAGAGATACCTaGATTATTGAAAGGGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: SIINYQPVTVSATLLAFWTERDT*IIERDK Trigger: CTTATCCCTTTCAATAATTCAGGTATCTCTCTCTGT...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATAACCTGAGACGTCTATaGTTCCAGTTAAATAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYNLRRL*FQLNSR Trigger: TCTGCTATTTAACTGGAAGCATAGACGTCTCAGGTT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATACTGCAGTCGGTTTATaGATGCCTGTGATAGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYTAVGL*MPVIEI Trigger: TATTTCTATCACAGGCATCCATAAACCGACTGCAGT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATCAGAGAAAAGCCAAATaGCAAAATTCACAGGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYQRKAK*QNSQAH Trigger: ATGAGCCTGTGAATTTTGCCATTTGGCTTTTCTCTG...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 90 bp | TGTGCGTATGTGTGTGTGTGTTTGTATGTGTACTGGTATAAAAACTaGACAGGCAGGGTAATATTTCACTCAGTGTTAAATGAAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CAYVCVCLYVYWYKN*TGRVIFHSVLNEVF Trigger: AAAGACTTCATTTAACACTGAGTGAAATATTACCCTGCCTGTCAAGTTTTTATACCAGTACACATACAAACACACACACACATACGCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 90 bp | TTAGAGTCTAGCTACTATGGTAACTTCATTACAGTGTCTATAAAGTaGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LESSYYGNFITVSIK*WIPVLVPNAYKKLK Trigger: TTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAACTTTATAGACACTGTAATGAAGTTACCATAGTAGCTAGACTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTGTTTGTATGTGTACTaGTATAAAAACTTGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SEYNKLSASDCFCHTACICLYVY*YKNLTG Trigger: GCCTGTCAAGTTTTTATACCAGTACACATACAAACA...AATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATGCTTCCAGTTAAATAGCTGTTTGTATGTGTACTaGTATAAAAACTTGACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FYLRVTKNLRRLCFQLNSCLYVY*YKNLTG Trigger: GCCTGTCAAGTTTTTATACCAGTACACATACAAACA...GCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR GCA 72 bp | GACTGTCCACATGCCTCCTGGGGAGGGTGGTGGTGCTaGCTGCCTATGTGGAAAAACGATGGCGCCAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: DCPHASWGGWWC*LPMWKNDGARL Trigger: AAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCGCATTTTGGAGTTCCTaGTCTACCTGTGGCACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAAFWSS*STCGTY Trigger: GTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGC...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR GCA 72 bp | GATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTaGGGGGTCTCTGCCTTGATATGTGGGTATCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: DSPGVHCCSSEP*GVSALICGYLN Trigger: GTTGAGATACCCACATATCAAGGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | GTAGTGTCAGTCCATGGTGACTGTCCACATGCCTCCTaGGGAGGGTGGTGGTGCTGCCTGCCTATGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VVSVHGDCPHAS*GGWWCCLPMWK Trigger: TTTCCACATAGGCAGGCAGCACCACCACCCTCCCCAGGAGGCATGTGGACAGTCACCATGGACTGACACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCCCGGTGCACCTTGTCTaGTTTCTACGAGCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAPVHLV*FLRALK Trigger: TTTTAAAGCTCGTAGAAACAAGACAAGGTGCACCGG...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | ATGGCCACCGAAAAATCAAGTAGTGTCAGTCCATGGTaGCTGTCCACATGCCTCCTGGGGAGGGTGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: MATEKSSSVSPW*LSTCLLGRVVV Trigger: CACCACCACCCTCCCCAGGAGGCATGTGGACAGTCACCATGGACTGACACTACTTGATTTTTCGGTGGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | CTGCCTGCCTATGTGGAAAAACGATGGCGCCAGACTTaGAGGTGCCGCGTGTGTGGGATTTGGGGGTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: LPAYVEKRWRQT*RCRVCGIWGLL Trigger: TAATAACCCCCAAATCCCACACACGCGGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | CCATCACAGAGAAGCCAACAAGCCTCGGTTGCAAACTaGGAGGGTATGAGGTGTACAACTACGGCTGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSQRSQQASVAN*EGMRCTTTAVG Trigger: TCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTCTGTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | TGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATaGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CVRLLSLPQKRS*VVVWCVDWKCS Trigger: GGAACACTTCCAGTCTACACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR GCA 72 bp | AGGGCTGTCATCAAGGCGTCAACACCATGGGCCCTCTaGGAAGCATTTCGTTTTGGAAAGACAGTACTATTG | + |
|
Preference number: 3 (lower is better) Translates to: RAVIKASTPWAL*EAFRFGKTVLL Trigger: CAATAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGACAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR CCA 72 bp | ACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTaGAATCCCTCTGTACCCTCACTTACTGACTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TWVTATSIQRSW*NPSVPSLTDSN Trigger: ATTTGAGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | AGAGGTAATCAGTCCAAGGTACACTCACCAGTGTCCTaGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RGNQSKVHSPVS*EIYSTRAVLCP Trigger: TGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCAGGACACTGGTGAGTGTACCTTGGACTGATTACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATACTATTTGTGTCAGGTaGCTCTCCTTGCCTCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRCDTRLHNCSRFMDACDTICVR*LSLPQK Trigger: TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGT...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | TCTACTGACTTGGGAAGTAGAAAAATGAGTCACGAATaGCATGTTTGTGGGCCGTCCCTAGGAGAGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: STDLGSRKMSHE*HVCGPSLGELW Trigger: CCATAGCTCTCCTAGGGACGGCCCACAAACATGTCATTCGTGACTCATTTTTCTACTTCCCAAGTCAGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR GCA 72 bp | AACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTaGCTCAGAAACGGTCATGGGTTGTTGTGTGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NQKRLFVSGCSP*LRNGHGLLCGV Trigger: CACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | CAGAAACGGTCATGGGTTGTTGTGTGGTGTGTAGACTaGAAGTGTTCCTGCAGAATTCTAGTCAGTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QKRSWVVVWCVD*KCSCRILVSLG Trigger: TCCTAGACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCATGACCGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | AAAACGATGGCGCCAGACTTGAAGGTGCCGCGTGTGTaGGATTTGGGGGTTATTAATTTAGCAGTTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: KTMAPDLKVPRV*DLGVINLAVLY Trigger: GTAAAGAACTGCTAAATTAATAACCCCCAAATCCCACACACGCGGCACCTTCAAGTCTGGCGCCATCGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR GCA 72 bp | ATCAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTaGTCTCCTTGCCTCAGAAACGGTCATGGGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IRRNQKRLFVSG*SPCLRNGHGLL Trigger: CAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTATGAAAAATATGACGTaGCATGCTGCCATGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILSSKCFAVTPVYITAVGMKNMT*HAAMIA Trigger: TGCTATCATGGCAGCATGCAACGTCATATTTTTCAT...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | CAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTaGTGGAAAGTTCACACTGACATGAAGTCAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QGSSLPKESMLL*WKVHTDMKSEF Trigger: GAACTCTGACTTCATGTCAGTGTGAACTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR GCA 72 bp | AAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTaGATTTTGGAGTTCCTTGTCTACCTGTGGCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: KLSASDCFCHTA*ILEFLVYLWHL Trigger: TAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTTACTCTTTAGTTCATTaGAGATTCAGGGGCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCYSLVH*RFRGSE Trigger: CTCACTGCCCCTGAATCTCAAATGAACTAAAGAGTA...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR GCA 72 bp | TTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTaGAGTCGGTTTATGGATGCCTGTGATAGAAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: FQMLRCDTRLHN*SRFMDACDRNS Trigger: ACTATTTCTATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | TCCCCGTGTTGGCATCAAAACACACAATACTGCAGATaGACATGTCACTTAAAGCCTAGTGGGAACATTATT | + |
|
Preference number: 3 (lower is better) Translates to: SPCWHQNTQYCR*TCHLKPSGNII Trigger: AATAATGTTCCCACTAGGCTTTAAGTGACATGTCCATCTGCAGTATTGTGTGTTTTGATGCCAACACGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGCCGGTGCACCTTGTCTaGTTTCTACGAGCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SIINYQPVTVSATLLAFWPVHLV*FLRALK Trigger: TTTTAAAGCTCGTAGAAACAAGACAAGGTGCACCGG...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | AGAGCTCATCTAAATACTAAGTTAAGGTTGCATCTATaGAACCGGTGCACCTTGTCTTGTTTCTACGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RAHLNTKLRLHL*NRCTLSCFYEL Trigger: AAGCTCGTAGAAACAAGACAAGGTGCACCGGTTTCATAGATGCAACCTTAACTTAGTATTTAGATGAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR GCA 72 bp | TCTGAGTATAATAAATTATCAGCCAGTGACTGTTTCTaGCACACTGCTTGCATTTTGGAGTTCCTTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SEYNKLSASDCF*HTACILEFLVY Trigger: GTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | GTGTGTGCGTATGTGTGTGTGTGTTTGTATGTGTACTaGTATAAAAACTTGACAGGCAGGGTAATATTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VCAYVCVCLYVY*YKNLTGRVIFH Trigger: GTGAAATATTACCCTGCCTGTCAAGTTTTTATACCAGTACACATACAAACACACACACACATACGCACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTATGAAAAATATGACGTaGCATGCTGCCATGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SEYNKLSASDCFCHTACIMKNMT*HAAMIA Trigger: TGCTATCATGGCAGCATGCAACGTCATATTTTTCAT...AATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | ACACTTTGGGATGACTGTGTTTCACGCCCTCATTCTTaGGGCATAATATTTAGATACTTGTCCCTTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: TLWDDCVSRPHS*GIIFRYLSLSI Trigger: AATTGAAAGGGACAAGTATCTAAATATTATGCCTCAAGAATGAGGGCGTGAAACACAGTCATCCCAAAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | AATGTCATTATCAAAATGTGCCACTGTGTTCCCACATaGCAGTTAAGCTGGACCCACTTAATGTTAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NVIIKMCHCVPT*QLSWTHLMLTE Trigger: TTCTGTTAACATTAAGTGGGTCCAGCTTAACTGTCATGTGGGAACACAGTGGCACATTTTGATAATGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | CAGTTAAATAGCAGACCTAGAAATCTGGATGAGATGTaGAGCACACTTCTAGCGATTGAATGTCATTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: QLNSRPRNLDEM*STLLAIECHYQ Trigger: TTGATAATGACATTCAATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CCA 72 bp | AGTAGGCTTATGCTTTTAAGCAAGGAGATTCAACAATaGACACATCTTTTCAGAATGTGTTTCCGTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLMLLSKEIQQ*THLFRMCFRGS Trigger: TGAACCACGGAAACACATTCTGAAAAGATGTGTCCATTGTTGAATCTCCTTGCTTAAAAGCATAAGCCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| 3UTR GCA 72 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATaGTTCCAGTTAAATAGCAGACCTAGAAATCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FYLRVTKNLRRL*FQLNSRPRNLD Trigger: ATCCAGATTTCTAGGTCTGCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | TATCTAACTTATGATAATAAAAGACACACTTTGGGATaGCTGTGTTTCACGCCCTCATTCTTGAGGCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: YLTYDNKRHTLG*LCFTPSFLRHN Trigger: ATTATGCCTCAAGAATGAGGGCGTGAAACACAGTCATCCCAAAGTGTGTCTTTTATTATCATAAGTTAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR TCA 72 bp | CAAAGAGTCAATGTTACTGTGATGGAAAGTTCACACTaGCATGAAGTCAGAGTTCATTCCAAAAGTAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRVNVTVMESSH*HEVRVHSKSNK Trigger: TTTGTTACTTTTGGAATGAACTCTGACTTCATGTCAGTGTGAACTTTCCATCACAGTAACATTGACTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCAGGTGGGTCTTCTTGTaGGGGATGCTTCTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSARWVFL*GMLLSP Trigger: GGGAGACAGAAGCATCCCGCACAAGAAGACCCACCT...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCCAACCGAAAACTCAATaGAAGTCGAGGATAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAQPKTQ*KSRIGT Trigger: GGTGCCTATCCTCGACTTTCATTGAGTTTTCGGTTG...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCTGGTGTCACCAACGCTaGCTGCAACCTCATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAWCHQR*LQPHSF Trigger: AAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCA...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCGAGAGAAAAGGTGAATaGAAACACGATGCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAERKGE*KHDAGP Trigger: TGGTCCCGCATCGTGTTTCCATTCACCTTTTCTCTC...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCGAGGGCATATACGTCTaGAGAATGAAGTACCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAEGIYV*RMKYPI Trigger: TATCGGGTACTTCATTCTTCAGACGTATATGCCCTC...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCAGCTTCTTCTGCCTTTaGGGACCTCTTCCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSASFFCL*GPLPKK Trigger: TTTCTTTGGAAGAGGTCCCCAAAGGCAGAAGAAGCT...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTCCTTTCCACGCCAGTaGCAGCCTTGTCCCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYSFPRQ*QPCPRH Trigger: GTGGCGGGGACAAGGCTGTCACTGGCGTGGAAAGGA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCCCTATACTGGATTCCTaGGTTGTCAAAGGATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSAPILDS*VVKGYC Trigger: GCAATATCCTTTGACAACTCAGGAATCCAGTATAGG...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | GCTGCCTGCCTATGTGGAAAAACGATGGCGCCAGACTaGAAGGTGCCGCGTGTGTGGGATTTGGGGGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: AACLCGKTMAPD*KVPRVWDLGVI Trigger: AATAACCCCCAAATCCCACACACGCGGCACCTTCAAGTCTGGCGCCATCGTTTTTCCACATAGGCAGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATCCGGGGCCGAGAAGATaGCGAAAAGCCTTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDPGPRR*RKAFLP Trigger: CGGGAGGAAGGCTTTTCGGCATCTTCTCGGCCCCGG...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039697.14 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCCGGGAGTGCACTGCTGCTCTTCTGAGCCCTGCGGGGTCTCTGCCCTCTGTTTCCTATACTaGATTCCTGAGTTGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSPGVHCCSSEPCGVSALCFLY*IPELSK Trigger: CTTTGACAACTCAGGAATCCAGTATAGGAAACAGAG...GGCAGAGACCCCGCAGGGCTCAGAAGAGCAGCAGTGCACTCCCGGGGAATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAGACCTCCTCCGTAGGTaGGTCTTCTTGTGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQDLLRR*VFLCGM Trigger: CATCCCGCACAAGAAGACCCACCTACGGAGGAGGTC...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | ACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATGTCCTTTCCACGCCAGTaGCAGCCTTGTCCCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKRDYLCQVALLASETVMSFPRQ*QPCPRH Trigger: GTGGCGGGGACAAGGCTGTCACTGGCGTGGAAAGGA...CATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCCAGAAACCATGTCGATaGTGGCGATGTCGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALDMGNSHLHSEVLVESLQKPCR*WRCRCS Trigger: TGAACATCGACATCGCCAGCATCGACATGGTTTCTG...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTGACGGTGCTCTACAATaGAGAACTGTGGGAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTDGALQ*RTVGAR Trigger: TCGAGCTCCCACAGTTCTCCATTGTAGAGCACCGTC...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAGTCCATCATGCACGCTaGTGTCGTAGTGATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQVHHAR*CRSDPE Trigger: CTCAGGATCACTACGACAGCAGCGTGCATGATGGAC...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCGGCGTACTCCAGAAGTaGCAGGAATACAAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALDMGNSHLHSEVLVESLGVLQK*QEYKDK Trigger: TTTGTCTTTGTATTCCTGGCACTTCTGGAGTACGCC...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGACCTCCTCCGTAGGTaGGTCTTCTTGTGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILSSKCFAVTPVYITAVGDLLRR*VFLCGM Trigger: CATCCCGCACAAGAAGACCCACCTACGGAGGAGGTC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCACATGTCGATGGCTTTaGCATAGGGAATTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALDMGNSHLHSEVLVESLTCRWL*HREFWV Trigger: TACCCAAAATTCCCTATGTCAAAGCCATCGACATGT...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTAGTCCATCATGCACGCTaGTGTCGTAGTGATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTPWALCEAFRFGKTVLVHHAR*CRSDPE Trigger: CTCAGGATCACTACGACAGCAGCGTGCATGATGGAC...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTCCGCAAGCTTCTTCTaGCTTTGGGGACCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYSASFF*LWGPLP Trigger: TGGAAGAGGTCCCCAAAGGCAGAAGAAGCTTGCGGA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTTACAATGGAGAACTGTaGGAGCTCGATCCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTYNGEL*ELDPFH Trigger: GTGGAAAGGATCGAGCTCCCACAGTTCTCCATTGTA...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAACGAAGACAACATTCCTaGAGACCAGACGGTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQRRQHS*RPDGAL Trigger: TAGAGCACCGTCTGGTCTCCAGGAATGTTGTCTTCG...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATCCAGGAAAGCCAGATTaGCAGCAGCAGGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNPGKPD*QQQGLE Trigger: CTCCAGGCCCTGCTGCTGCCAATCTGGCTTTCCTGG...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGCAACCGAAAACTCAATaGAAGTCGAGGATAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VIKASTPWALCEAFRFGKQPKTQ*KSRIGT Trigger: GGTGCCTATCCTCGACTTTCATTGAGTTTTCGGTTG...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR TCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAACAACCGAAAACTCAATaGAAGTCGAGGATAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQQPKTQ*KSRIGT Trigger: GGTGCCTATCCTCGACTTTCATTGAGTTTTCGGTTG...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTGTCAAAGGATATTGCTaGATTCCTGGTGTCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTVKGYC*IPGVTN Trigger: GTTGGTGACACCAGGAATTCAGCAATATCCTTTGAC...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTCTTCTTGTGCGGGATaGTTCTGTCTCCCATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYSSCAG*FCLPCT Trigger: GGTACATGGGAGACAGAAGCATCCCGCACAAGAAGA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGAGGTGGGTCTTCTTGTaGGGGATGCTTCTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKRWVFL*GMLLSP Trigger: GGGAGACAGAAGCATCCCGCACAAGAAGACCCACCT...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATGACGGTGCTCTACAATaGAGAACTGTGGGAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDDGALQ*RTVGAR Trigger: TCGAGCTCCCACAGTTCTCCATTGTAGAGCACCGTC...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTAGCTTCTTCTGCCTTTaGGGACCTCTTCCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTSFFCL*GPLPKK Trigger: TTTCTTTGGAAGAGGTCCCCAAAGGCAGAAGAAGCT...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTAGATCATTCTTGGCCTTaGCTGTCTTCTCCGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPWALCEAFRFGKTVLDHSWP*LSSPQA Trigger: AGCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATC...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTGGGACCATCTGTCTATaGCATTCACATCGGTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTGTICL*HSHRLD Trigger: ATCTAACCGATGTGAATGCCATAGACAGATGGTCCC...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTGGTGGAGGCGGATCATaGGGTTTTTCACTGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSGGGGS*GFSLSL Trigger: GAGTGACAGTGAAAAACCGCATGATCCGCCTCCACC...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATCTGGAGACCAGACGGTaGTCTACAATGGAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDLETRR*STMENC Trigger: ACAGTTCTCCATTGTAGAGCACCGTCTGGTCTCCAG...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAGGCGTACTCCAGAAGTaGCAGGAATACAAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQGVLQK*QEYKDK Trigger: TTTGTCTTTGTATTCCTGGCACTTCTGGAGTACGCC...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAGTCACCAACGCTGCCTaGAACCTCATTCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQVTNAA*NLIHFI Trigger: AATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGAC...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTGGTGTCACCAACGCTaGCTGCAACCTCATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYWCHQR*LQPHSF Trigger: AAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACAAACCATGTCGATGCTaGCGATGTCGATGTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYKPCRC*RCRCSS Trigger: GGATGAACATCGACATCGCCAGCATCGACATGGTTT...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATCGAAGACAACATTCCTaGAGACCAGACGGTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDRRQHS*RPDGAL Trigger: TAGAGCACCGTCTGGTCTCCAGGAATGTTGTCTTCG...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTGAGGATAGGCACCTGTaGCGAAGACAACATTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSEDRHL*RRQHSW Trigger: CCAGGAATGTTGTCTTCGCCACAGGTGCCTATCCTC...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATGATCATTCTTGGCCTTaGCTGTCTTCTCCGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDDHSWP*LSSPQA Trigger: AGCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATC...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | TCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTaGGAGTTCCTTGTCTACCTGTGGCACTTACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SASDCFCHTACI*EFLVYLWHLHL Trigger: AAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTAGGTATAATCCATGTTaGCTTCAGAAACCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTRYNPC*LQKPCR Trigger: TCGACATGGTTTCTGAAGTCAACATGGATTATACCT...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAACATGTCGATGGCTTTaGCATAGGGAATTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQTCRWL*HREFWV Trigger: TACCCAAAATTCCCTATGTCAAAGCCATCGACATGT...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAACCTATACTGGATTCCTaGGTTGTCAAAGGATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQPILDS*VVKGYC Trigger: GCAATATCCTTTGACAACTCAGGAATCCAGTATAGG...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGAACTCGAGCAGCAGATaGATCGTAATTGATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIKASTPWALCEAFRFGKNSSSR*IVIDPE Trigger: TTCTGGATCAATTACGATGCATCTGCTGCTCGAGTT...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATTGGTGTCACCAACGCTaGCTGCAACCTCATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDWCHQR*LQPHSF Trigger: AAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCA...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATAAACCATGTCGATGCTaGCGATGTCGATGTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDKPCRC*RCRCSS Trigger: GGATGAACATCGACATCGCCAGCATCGACATGGTTT...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGTTTTGCTCATCCAGTaGGTATCTTCTGAGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYVLLIQ*VSSEVH Trigger: ATGGACCTCAGAAGATACCCACTGGATGAGCAAAAC...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGACGGTGCTCTACAATaGAGAACTGTGGGAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCDGALQ*RTVGAR Trigger: TCGAGCTCCCACAGTTCTCCATTGTAGAGCACCGTC...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATGAGGATAGGCACCTGTaGCGAAGACAACATTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNEDRHL*RRQHSW Trigger: CCAGGAATGTTGTCTTCGCCACAGGTGCCTATCCTC...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGAGGATAGGCACCTGTaGCGAAGACAACATTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCEDRHL*RRQHSW Trigger: CCAGGAATGTTGTCTTCGCCACAGGTGCCTATCCTC...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACAGCTTCTTCTGCCTTTaGGGACCTCTTCCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYSFFCL*GPLPKK Trigger: TTTCTTTGGAAGAGGTCCCCAAAGGCAGAAGAAGCT...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATGGATCATTCTTGGCCTTaGCTGTCTTCTCCGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRDYLCQVALLASETVMDHSWP*LSSPQA Trigger: AGCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATC...CATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCTGTACCCTCACTTACTGACTCTCTGTTTCCTATACTaGATTCCTGAGTTGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPFRGPGGIPLYPHLLTLCFLY*IPELSK Trigger: CTTTGACAACTCAGGAATCCAGTATAGGAAACAGAG...AGTCAGTAAGTGAGGGTACAGAGGGATTCCACCAGGACCTCTGAATGGAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTATGGATGCCTGTGATGAGGGCATATACGTCTaGAGAATGAAGTACCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LRCDTRLHNCSRFMDACDEGIYV*RMKYPI Trigger: TATCGGGTACTTCATTCTTCAGACGTATATGCCCTC...ATCACAGGCATCCATAAACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GTCATCAAGGCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGCAAAGAAAATGTAGTTaGCAAAGGCGTACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIKASTPWALCEAFRFGKQRKCS*QRRTPE Trigger: TTCTGGAGTACGCCTTTGTCAACTACATTTTCTTTG...CTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGCCTTGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTCTGGAGACCAGACGGTaGTCTACAATGGAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCLETRR*STMENC Trigger: ACAGTTCTCCATTGTAGAGCACCGTCTGGTCTCCAG...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGGCGTACTCCAGAAGTaGCAGGAATACAAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSKCFAVTPVYITAVGGVLQK*QEYKDK Trigger: TTTGTCTTTGTATTCCTGGCACTTCTGGAGTACGCC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATGCCCTTCCTTGGGCATaGTCTGTTTCCTATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNALPWA*SVSYTG Trigger: TCCAGTATAGGAAACAGAGCATGCCCAAGGAAGGGC...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATGTACAATGGAGAACTGTaGGAGCTCGATCCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKRDYLCQVALLASETVMYNGEL*ELDPFH Trigger: GTGGAAAGGATCGAGCTCCCACAGTTCTCCATTGTA...CATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGAAGACAACATTCCTaGAGACCAGACGGTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKEPKETICVRLLSLPQKRRQHS*RPDGAL Trigger: TAGAGCACCGTCTGGTCTCCAGGAATGTTGTCTTCG...TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTATATTGCTGAATTCCTaGTGTCACCAACGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSILLNS*CHQRCL Trigger: CAGGCAGCGTTGGTGACACCAGGAATTCAGCAATAT...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGGAGAGAAAAGGTGAATaGAAACACGATGCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKERKGE*KHDAGP Trigger: TGGTCCCGCATCGTGTTTCCATTCACCTTTTCTCTC...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACCGGGGTCGTTTACGCTaGTTTCATAAATGGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYRGRLR*FHKWHK Trigger: TTTATGCCATTTATGAAACCAGCGTAAACGACCCCG...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085240.11 |
||
| 3UTR CAA 72 bp | GAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTaGCCTCAGAAACGGTCATGGGTTGTTGTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPKETICVRLLS*PQKRSWVVVWC Trigger: ACACCACACAACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | ACTGTTTCTGCCACACTGCTTGCATTTTGGAGTTCCTaGTCTACCTGTGGCACTTACACCTTGAGTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSATLLAFWSS*STCGTYTLSYR Trigger: CCTGTAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAATGCAAGCAGTGTGGCAGAAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTACATGTCGATGGCTTTaGCATAGGGAATTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSKCFAVTPVYITAVGTCRWL*HREFWV Trigger: TACCCAAAATTCCCTATGTCAAAGCCATCGACATGT...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACAGAAACCATGTCGATaGTGGCGATGTCGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKEPKETICVRLLSLPQKQKPCR*WRCRCS Trigger: TGAACATCGACATCGCCAGCATCGACATGGTTTCTG...TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATAAACCATGTCGATGCTaGCGATGTCGATGTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNKPCRC*RCRCSS Trigger: GGATGAACATCGACATCGCCAGCATCGACATGGTTT...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTGACCTCCTCCGTAGGTaGGTCTTCTTGTGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFDLLRR*VFLCGM Trigger: CATCCCGCACAAGAAGACCCACCTACGGAGGAGGTC...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | GTCCGTGTGTGTGTGTGTGCGTATGTGTGTGTGTGTTaGTATGTGTACTGGTATAAAAACTTGACAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVCVCAYVCVC*YVYWYKNLTGR Trigger: CCTGCCTGTCAAGTTTTTATACCAGTACACATACAAACACACACACACATACGCACACACACACACACGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | GATCAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTaGCTCTCCTTGCCTCAGAAACGGTCATGGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DQKEPKETICVR*LSLPQKRSWVV Trigger: AACAACCCATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTATCATTCATTTCATTGTaGACATCCATCGGTGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPWALCEAFRFGKTVLSFISL*TSIGAN Trigger: ATTAGCACCGATGGATGTTCACAATGAAATGAATGA...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTAACTCGAGCAGCAGATaGATCGTAATTGATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSNSSSR*IVIDPE Trigger: TTCTGGATCAATTACGATGCATCTGCTGCTCGAGTT...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGTCCGCAAGCTTCTTCTaGCTTTGGGGACCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIINYQPVTVSATLLAFWSASFF*LWGPLP Trigger: TGGAAGAGGTCCCCAAAGGCAGAAGAAGCTTGCGGA...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAAGTCACCAACGCTGCCTaGAACCTCATTCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QKEPKETICVRLLSLPQKVTNAA*NLIHFI Trigger: AATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGAC...TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATAGGTGGGTCTTCTTGTaGGGGATGCTTCTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYRWVFL*GMLLSP Trigger: GGGAGACAGAAGCATCCCGCACAAGAAGACCCACCT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAATGGAAGATCTCCACTTaGCTCCCACACAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKWKIST*LPHSQA Trigger: TGCCTGGCTGTGTGGGAGGCAAGTGGAGATCTTCCA...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085240.11 |
||
| CDS-3UTR CCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATGTTTTGCTCATCCAGTaGGTATCTTCTGAGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNVLLIQ*VSSEVH Trigger: ATGGACCTCAGAAGATACCCACTGGATGAGCAAAAC...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | TTGTCAACTCCGTGTTTCAAAACAAGAGAACTGCTTTaGATGGGAACAACTGAAGATGTCCCCGTGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTPCFKTRELL*MGTTEDVPVLA Trigger: TGCCAACACGGGGACATCTTCAGTTGTTCCCATCAAAAGCAGTTCTCTTGTTTTGAAACACGGAGTTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR TCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGAGGTATAATCCATGTTaGCTTCAGAAACCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKRYNPC*LQKPCR Trigger: TCGACATGGTTTCTGAAGTCAACATGGATTATACCT...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR TCA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATCCTATACTGGATTCCTaGGTTGTCAAAGGATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNPILDS*VVKGYC Trigger: GCAATATCCTTTGACAACTCAGGAATCCAGTATAGG...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGCTGGAGACCAGACGGTaGTCTACAATGGAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIINYQPVTVSATLLAFWLETRR*STMENC Trigger: ACAGTTCTCCATTGTAGAGCACCGTCTGGTCTCCAG...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTTCCGCAAGCTTCTTCTaGCTTTGGGGACCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFSASFF*LWGPLP Trigger: TGGAAGAGGTCCCCAAAGGCAGAAGAAGCTTGCGGA...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGGCCCTTCCTTGGGCATaGTCTGTTTCCTATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIINYQPVTVSATLLAFWALPWA*SVSYTG Trigger: TCCAGTATAGGAAACAGAGCATGCCCAAGGAAGGGC...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTCGCTGGTTTCATAAATaGCATAAAGTTTTCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSSKCFAVTPVYITAVGRWFHK*HKVFHA Trigger: AGCATGGAAAACTTTATGCCATTTATGAAACCAGCG...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085240.11 |
||
| 3UTR CAA 72 bp | AGCTACAATGTGCCTGACCCCTCTGAGATGATCTCATaGGTGAAATTGTCAACTCCGTGTTTCAAAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYNVPDPSEMIS*VKLSTPCFKTR Trigger: TCTTGTTTTGAAACACGGAGTTGACAATTTCACCAATGAGATCATCTCAGAGGGGTCAGGCACATTGTAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR TCA 90 bp | TACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTGATGGAAAGTATACGTCTGAAGAATaGAGTACCCGATATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSTRAVLCPKSQCYCDGKYTSEE*STRYFS Trigger: AGAGAAATATCGGGTACTTCATTCTTCAGACGTATA...CTTTCCATCACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTTATACGTCTGAAGAATaGAGTACCCGATATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSYTSEE*STRYFS Trigger: AGAGAAATATCGGGTACTTCATTCTTCAGACGTATA...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTGAGGGCATATACGTCTaGAGAATGAAGTACCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LNSRPRNLDEMWSTLLAIEGIYV*RMKYPI Trigger: TATCGGGTACTTCATTCTTCAGACGTATATGCCCTC...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | TGGGTTGTTGTGTGGTGTGTAGACTGGAAGTGTTCCTGCAGAATTCTAGTCAGTTCATTCATTTCATTGTaGACATCCATCGGTGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: WVVVWCVDWKCSCRILVSSFISL*TSIGAN Trigger: ATTAGCACCGATGGATGTTCACAATGAAATGAATGA...ACTGACTAGAATTCTGCAGGAACACTTCCAGTCTACACACCACACAACAACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTGCCCTTCCTTGGGCATaGTCTGTTTCCTATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFALPWA*SVSYTG Trigger: TCCAGTATAGGAAACAGAGCATGCCCAAGGAAGGGC...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATTCTTCTTGTGCGGGATaGTTCTGTCTCCCATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYSSCAG*FCLPCT Trigger: GGTACATGGGAGACAGAAGCATCCCGCACAAGAAGA...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTTCTTCTTGTGCGGGATaGTTCTGTCTCCCATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFSSCAG*FCLPCT Trigger: GGTACATGGGAGACAGAAGCATCCCGCACAAGAAGA...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGTACAATGGAGAACTGTaGGAGCTCGATCCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIINYQPVTVSATLLAFWYNGEL*ELDPFH Trigger: GTGGAAAGGATCGAGCTCCCACAGTTCTCCATTGTA...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTGAGAGAAAAGGTGAATaGAAACACGATGCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEYNKLSASDCFCHTACIERKGE*KHDAGP Trigger: TGGTCCCGCATCGTGTTTCCATTCACCTTTTCTCTC...AATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | TTTTGGAGTTCCTTGTCTACCTGTGGCACTTACACCTaGAGTTACAGGATACAGAGAGAGATACCTGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FWSSLSTCGTYT*SYRIQREIPEL Trigger: TAATTCAGGTATCTCTCTCTGTATCCTGTAACTCAAGGTGTAAGTGCCACAGGTAGACAAGGAACTCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | ACCGCCTATTCCTACGAGAACAATCCTGTACTTACCTaGAACACATCTACTGACTTGGGAAGTAGAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TAYSYENNPVLT*NTSTDLGSRKM Trigger: CATTTTTCTACTTCCCAAGTCAGTAGATGTGTTCAAGGTAAGTACAGGATTGTTCTCGTAGGAATAGGCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR GCA 90 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATGCTTCCAGTTAAATAGCCAGAAACCATGTCGATaGTGGCGATGTCGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FYLRVTKNLRRLCFQLNSQKPCR*WRCRCS Trigger: TGAACATCGACATCGCCAGCATCGACATGGTTTCTG...GCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATATATTGCTGAATTCCTaGTGTCACCAACGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYILLNS*CHQRCL Trigger: CAGGCAGCGTTGGTGACACCAGGAATTCAGCAATAT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAAGTCAAAGGATATTGCTaGATTCCTGGTGTCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKVKGYC*IPGVTN Trigger: GTTGGTGACACCAGGAATTCAGCAATATCCTTTGAC...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATGCTTCCAGTTAAATAGCGTCAAAGGATATTGCTaGATTCCTGGTGTCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FYLRVTKNLRRLCFQLNSVKGYC*IPGVTN Trigger: GTTGGTGACACCAGGAATTCAGCAATATCCTTTGAC...GCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAAGTCACCAACGCTGCCTaGAACCTCATTCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKVTNAA*NLIHFI Trigger: AATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGAC...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATGGGACCATCTGTCTATaGCATTCACATCGGTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYGTICL*HSHRLD Trigger: ATCTAACCGATGTGAATGCCATAGACAGATGGTCCC...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAAGGGACCATCTGTCTATaGCATTCACATCGGTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKGTICL*HSHRLD Trigger: ATCTAACCGATGTGAATGCCATAGACAGATGGTCCC...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | GTTAAGGTTGCATCTATGAAACCGGTGCACCTTGTCTaGTTTCTACGAGCTTTAAAAAGTCCAAATCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKVASMKPVHLV*FLRALKSPNPD Trigger: ATCAGGATTTGGACTTTTTAAAGCTCGTAGAAACAAGACAAGGTGCACCGGTTTCATAGATGCAACCTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATAACTCGAGCAGCAGATaGATCGTAATTGATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYNSSSR*IVIDPE Trigger: TTCTGGATCAATTACGATGCATCTGCTGCTCGAGTT...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAAAGGTATAATCCATGTTaGCTTCAGAAACCATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKRYNPC*LQKPCR Trigger: TCGACATGGTTTCTGAAGTCAACATGGATTATACCT...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATGCTTCCAGTTAAATAGCCAAAGAAAATGTAGTTaGCAAAGGCGTACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYLRVTKNLRRLCFQLNSQRKCS*QRRTPE Trigger: TTCTGGAGTACGCCTTTGTCAACTACATTTTCTTTG...GCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTCAAAGAAAATGTAGTTaGCAAAGGCGTACTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFQRKCS*QRRTPE Trigger: TTCTGGAGTACGCCTTTGTCAACTACATTTTCTTTG...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATCTCTGTTTCCTATACTaGATTCCTGAGTTGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYLCFLY*IPELSK Trigger: CTTTGACAACTCAGGAATCCAGTATAGGAAACAGAG...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTGTGCTTATGAGATATGTCAGTACATAAATAAAGGCTGTGAAGATTTTTATACGTCTGAAGAATaGAGTACCCGATATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCAYEICQYINKGCEDFYTSEE*STRYFS Trigger: AGAGAAATATCGGGTACTTCATTCTTCAGACGTATA...AAAATCTTCACAGCCTTTATTTATGTACTGACATATCTCATAAGCACACCCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR TCA 90 bp | AGAATGAAAAATATGACGTTGCATGCTGCCATGATAGCAAGCAGAAGAAACAAATCATTCATTTCATTGTaGACATCCATCGGTGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RMKNMTLHAAMIASRRNKSFISL*TSIGAN Trigger: ATTAGCACCGATGGATGTTCACAATGAAATGAATGA...TTTGTTTCTTCTGCTTGCTATCATGGCAGCATGCAACGTCATATTTTTCATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTTTGTATGTGTACTGGTATAAAAACTaGACAGGCAGGGTAATATTTCACTCAGTGTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCLYVYWYKN*TGRVIFHSVLN Trigger: ATTTAACACTGAGTGAAATATTACCCTGCCTGTCAAGTTTTTATACCAGTACACATACAAACACACACACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| 3UTR CAA 72 bp | TTCATTACAGTGTCTATAAAGTTGTGGATCCCAGTCTaGGTGCCAAATGCATATAAAAAGCTCAAAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FITVSIKLWIPV*VPNAYKKLKSY Trigger: ATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAACTTTATAGACACTGTAATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS CCA 90 bp | GACAACATTCCTGGAGACCAGACGGTGCTCTACAATGGAGAACTGTaGGAGCTCGATCCTTTCCACGCCAGTGACAGCCTTGTCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DNIPGDQTVLYNGEL*ELDPFHASDSLVPA Trigger: GGCGGGGACAAGGCTGTCACTGGCGTGGAAAGGATCGAGCTCCCACAGTTCTCCATTGTAGAGCACCGTCTGGTCTCCAGGAATGTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS GCA 90 bp | TGGGTCTTCTTGTGCGGGATGCTTCTGTCTCCCATGTACCGCCCATaGCCTTCCTTGGGCATGCTCTGTTTCCTATACTGGATTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVFLCGMLLSPMYRP*PSLGMLCFLYWIPE Trigger: CTCAGGAATCCAGTATAGGAAACAGAGCATGCCCAAGGAAGGGCATGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS GCA 90 bp | TTGATTTTGAGCTGTGAAGACCTCCTCCGTAGGTGGGTCTTCTTGTaGGGGATGCTTCTGTCTCCCATGTACCGCCCATGCCCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LILSCEDLLRRWVFL*GMLLSPMYRPCPSL Trigger: CAAGGAAGGGCATGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTTCACAGCTCAAAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS CCA 90 bp | AGATCAGGGATTTTGATTTTGAGCTGTGAAGACCTCCTCCGTAGGTaGGTCTTCTTGTGCGGGATGCTTCTGTCTCCCATGTACCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGILILSCEDLLRR*VFLCGMLLSPMYRP Trigger: TGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTTCACAGCTCAAAATCAAAATCCCTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | GGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAATGGTCAGCCACTCGATaGTCAAGCGTGAGGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCKLRGYEVYNYGCGSSQWSATR*SSVRLR Trigger: TCTCAACCTCACGCTTGACAATCGAGTGGCTGACCA...TTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCCTCTCAGTTTGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | GCGTCAACACCATGGGCCCTCTGCGAAGCATTTCGTTTTGGAAAGACAGTACTACGATCATTCTTGGCCTaGGCTGTCTTCTCCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASTPWALCEAFRFGKTVLRSFLA*AVFSAS Trigger: GCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATCG...TAGTACTGTCTTTCCAAAACGAAATGCTTCGCAGAGGGCCCATGGTGTTGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACTGGTCAGCCACTCGATaGTCAAGCGTGAGGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYWSATR*SSVRLR Trigger: TCTCAACCTCACGCTTGACAATCGAGTGGCTGACCA...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTGGACATGGGTAACAGCCACCTCCATTCAGAGGTCCTGGTGGAATCCCTCAGTTGTCAAAGGATATaGCTGAATTCCTGGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALDMGNSHLHSEVLVESLSCQRI*LNSWCH Trigger: GTGACACCAGGAATTCAGCAATATCCTTTGACAACT...GAGGGATTCCACCAGGACCTCTGAATGGAGGTGGCTGTTACCCATGTCCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAACGGTCATGATGGAAGATCTCCACTaGCCTCCCACACAGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKRDYLCQVALLASETVMMEDLH*PPTQPG Trigger: GCCTGGCTGTGTGGGAGGCAAGTGGAGATCTTCCAT...CATGACCGTTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085240.11 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCCAACAAGCCTCGGTTGCAAACTGAGAGGGTATGAGGTGTACAACTACAAGCTTCTTCTGCCTTaGGGGACCTCTTCCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EKPTSLGCKLRGYEVYNYKLLLP*GTSSKE Trigger: TTCTTTGGAAGAGGTCCCCAAAGGCAGAAGAAGCTT...GTAGTTGTACACCTCATACCCTCTCAGTTTGCAACCGAGGCTTGTTGGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTCGATCATTCTTGGCCTaGGCTGTCTTCTCCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCRSFLA*AVFSAS Trigger: GCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATCG...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
||
| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTTCCAGGAAAGCCAGATaGGCAGCAGCAGGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAISRKAR*AAAGPG Trigger: TCCAGGCCCTGCTGCTGCCAATCTGGCTTTCCTGGA...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGAACCAAAAGAGACTATTTGTGTCAGGTTGCTCTCCTTGCCTCAGAAATGGTCAGCCACTCGATaGTCAAGCGTGAGGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKEPKETICVRLLSLPQKWSATR*SSVRLR Trigger: TCTCAACCTCACGCTTGACAATCGAGTGGCTGACCA...TTTCTGAGGCAAGGAGAGCAACCTGACACAAATAGTCTCTTTTGGTTCCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTTAGAACGATCATTCTaGGCCTTGGCTGTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILSSKCFAVTPVYITAVGLERSF*ALAVFS Trigger: GGAGAAGACAGCCAAGGCCAAGAATGATCGTTCTAA...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTCGATCATTCTTGGCCTaGGCTGTCTTCTCCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAIRSFLA*AVFSAS Trigger: GCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATCG...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS GCA 90 bp | CTGAGTTGTCAAAGGATATTGCTGAATTCCTGGTGTCACCAACGCTaGCTGCAACCTCATTCATTTCATTGTGAACATCCATCGGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSCQRILLNSWCHQR*LQPHSFHCEHPSVL Trigger: TAGCACCGATGGATGTTCACAATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTTACTGGATTCCTGAGTaGTCAAAGGATATTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILSSKCFAVTPVYITAVGYWIPE*SKDIAE Trigger: TTCAGCAATATCCTTTGACAACTCAGGAATCCAGTA...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATTCAGGGATTTTGATTTaGAGCTGTGAAGACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNSGILI*SCEDLL Trigger: GAGGAGGTCTTCACAGCTCAAAATCAAAATCCCTGA...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCAAATGCTTCGCTGTGACACCCGTTTACATAACTGCAGTCGGTGTTAGATCAGGGATTTaGATTTTGAGCTGTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILSSKCFAVTPVYITAVGVRSGI*ILSCED Trigger: GTCTTCACAGCTCAAAATCAAAATCCCTGATCTAAC...ACCGACTGCAGTTATGTAAACGGGTGTCACAGCGAAGCATTTGGAAGACAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS TCA 90 bp | GACACCCACGAGAGGATTGTGATCAGGATTGAGGGCATATACGTCTaGAGAATGAAGTACCCGATATTTCTCTTCAACCGAAAACTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DTHERIVIRIEGIYV*RMKYPIFLFNRKLN Trigger: ATTGAGTTTTCGGTTGAAGAGAAATATCGGGTACTTCATTCTTCAGACGTATATGCCCTCAATCCTGATCACAATCCTCTCGTGGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000138350.2 ENSMUST00000196198.5 |
||
| CDS CCA 90 bp | TCCTATACTGGATTCCTGAGTTGTCAAAGGATATTGCTGAATTCCTaGTGTCACCAACGCTGCCTGCAACCTCATTCATTTCATTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SYTGFLSCQRILLNS*CHQRCLQPHSFHCE Trigger: TTCACAATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAGGAATCCAGTATAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
||
| CDS-3UTR CAA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATAGTTGTCAAAGGATATaGCTGAATTCCTGGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNSCQRI*LNSWCH Trigger: GTGACACCAGGAATTCAGCAATATCCTTTGACAACT...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTTTCCAAAGTGCAGTTTaGCTCATCCAGTGGGTATCT | + |
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Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAIFQSAV*LIQWVS Trigger: AGATACCCACTGGATGAGCAAAACTGCACTTTGGAA...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGTTAGAACGATCATTCTaGGCCTTGGCTGTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIINYQPVTVSATLLAFWLERSF*ALAVFS Trigger: GGAGAAGACAGCCAAGGCCAAGAATGATCGTTCTAA...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TGGGAAATTTACTCCACCAGGGCAGTTCTTTGCCCAAAGAGTCAATGTTACTGTTACTGGATTCCTGAGTaGTCAAAGGATATTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: WEIYSTRAVLCPKSQCYCYWIPE*SKDIAE Trigger: TTCAGCAATATCCTTTGACAACTCAGGAATCCAGTA...ACAGTAACATTGACTCTTTGGGCAAAGAACTGCCCTGGTGGAGTAAATTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 |
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| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTTCAGGGATTTTGATTTaGAGCTGTGAAGACCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAISGILI*SCEDLL Trigger: GAGGAGGTCTTCACAGCTCAAAATCAAAATCCCTGA...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | GGGTATGAGGTGTACAACTACGGCTGTGGGAGTTCCCAAAGATTAACTAAGAATGTTAGATCAGGGATTTaGATTTTGAGCTGTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: GYEVYNYGCGSSQRLTKNVRSGI*ILSCED Trigger: GTCTTCACAGCTCAAAATCAAAATCCCTGATCTAAC...ATTCTTAGTTAATCTTTGGGAACTCCCACAGCCGTAGTTGTACACCTCATACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATTTAGAACGATCATTCTaGGCCTTGGCTGTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYLERSF*ALAVFS Trigger: GGAGAAGACAGCCAAGGCCAAGAATGATCGTTCTAA...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTAGTTGTCAAAGGATATaGCTGAATTCCTGGTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAISCQRI*LNSWCH Trigger: GTGACACCAGGAATTCAGCAATATCCTTTGACAACT...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | AGTATAATAAATTATCAGCCAGTGACTGTTTCTGCCACACTGCTTGCATTTTGGTCAGGGATTTTGATTTaGAGCTGTGAAGACCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SIINYQPVTVSATLLAFWSGILI*SCEDLL Trigger: GAGGAGGTCTTCACAGCTCAAAATCAAAATCCCTGA...CCAAAATGCAAGCAGTGTGGCAGAAACAGTCACTGGCTGATAATTTATTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTTTACCTTAGAGTAACAAAGAACCTGAGACGTCTATGCTTCCAGTTAAATAGCTTCCAAAGTGCAGTTTaGCTCATCCAGTGGGTATCT | + |
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Preference number: 5 (lower is better) Translates to: FYLRVTKNLRRLCFQLNSFQSAV*LIQWVS Trigger: AGATACCCACTGGATGAGCAAAACTGCACTTTGGAA...GCTATTTAACTGGAAGCATAGACGTCTCAGGTTCTTTGTTACTCTAAGGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTAAATAGCAGACCTAGAAATCTGGATGAGATGTGGAGCACACTTCTAGCGATTGTTAGATCAGGGATTTaGATTTTGAGCTGTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LNSRPRNLDEMWSTLLAIVRSGI*ILSCED Trigger: GTCTTCACAGCTCAAAATCAAAATCCCTGATCTAAC...AATCGCTAGAAGTGTGCTCCACATCTCATCCAGATTTCTAGGTCTGCTATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS-3UTR CAA 90 bp | TTGTGGATCCCAGTCTTGGTGCCAAATGCATATAAAAAGCTCAAAAGCTATTATTACTGGATTCCTGAGTaGTCAAAGGATATTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LWIPVLVPNAYKKLKSYYYWIPE*SKDIAE Trigger: TTCAGCAATATCCTTTGACAACTCAGGAATCCAGTA...ATAATAGCTTTTGAGCTTTTTATATGCATTTGGCACCAAGACTGGGATCCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS GCA 72 bp | AAGACCTCCTCCGTAGGTGGGTCTTCTTGTGCGGGATaGTTCTGTCTCCCATGTACCGCCCATGCCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KTSSVGGSSCAG*FCLPCTAHALP Trigger: AGGAAGGGCATGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS GCA 72 bp | AGCTGTGAAGACCTCCTCCGTAGGTGGGTCTTCTTGTaGGGGATGCTTCTGTCTCCCATGTACCGCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: SCEDLLRRWVFL*GMLLSPMYRPC Trigger: GCATGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTTCACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CCA 72 bp | CCTGGAGACCAGACGGTGCTCTACAATGGAGAACTGTaGGAGCTCGATCCTTTCCACGCCAGTGACAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PGDQTVLYNGEL*ELDPFHASDSL Trigger: AAGGCTGTCACTGGCGTGGAAAGGATCGAGCTCCCACAGTTCTCCATTGTAGAGCACCGTCTGGTCTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CAA 72 bp | TTGAGCTGTGAAGACCTCCTCCGTAGGTGGGTCTTCTaGTGCGGGATGCTTCTGTCTCCCATGTACCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSCEDLLRRWVF*CGMLLSPMYRP Trigger: TGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTTCACAGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CAA 90 bp | ATTTTGATTTTGAGCTGTGAAGACCTCCTCCGTAGGTGGGTCTTCTaGTGCGGGATGCTTCTGTCTCCCATGTACCGCCCATGCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ILILSCEDLLRRWVF*CGMLLSPMYRPCPS Trigger: GGAAGGGCATGGGCGGTACATGGGAGACAGAAGCATCCCGCACAAGAAGACCCACCTACGGAGGAGGTCTTCACAGCTCAAAATCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CAA 90 bp | GCATCCACCCGGTTTATTTCACTCTTAGAACGATCATTCTTGGCCTaGGCTGTCTTCTCCGCAAGCTTCTTCTGCCTTTGGGGACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASTRFISLLERSFLA*AVFSASFFCLWGPL Trigger: AAGAGGTCCCCAAAGGCAGAAGAAGCTTGCGGAGAAGACAGCCAAGGCCAAGAATGATCGTTCTAAGAGTGAAATAAACCGGGTGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CAA 90 bp | TGCCCTTCCTTGGGCATGCTCTGTTTCCTATACTGGATTCCTGAGTaGTCAAAGGATATTGCTGAATTCCTGGTGTCACCAACGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CPSLGMLCFLYWIPE*SKDIAEFLVSPTLP Trigger: AGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAGGAATCCAGTATAGGAAACAGAGCATGCCCAAGGAAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS TCA 72 bp | CCAGAAGGACACCCACGAGAGGATTGTGATCAGGATTaGGGGCATATACGTCTGAAGAATGAAGTACCCGAT | + |
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Preference number: 6 (lower is better) Translates to: PEGHPREDCDQD*GHIRLKNEVPD Trigger: ATCGGGTACTTCATTCTTCAGACGTATATGCCCTCAATCCTGATCACAATCCTCTCGTGGGTGTCCTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000138350.2 ENSMUST00000196198.5 |
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| CDS CAA 90 bp | GCATGCTCTGTTTCCTATACTGGATTCCTGAGTTGTCAAAGGATATaGCTGAATTCCTGGTGTCACCAACGCTGCCTGCAACCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: ACSVSYTGFLSCQRI*LNSWCHQRCLQPHS Trigger: TGAATGAGGTTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAGGAATCCAGTATAGGAAACAGAGCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS TCA 72 bp | GAAGTACCCGATATTTCTCTTCAACCGAAAACTCAATaGAAGTCGAGGATAGGCACCTGTGGCGAAGACAAC | + |
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Preference number: 6 (lower is better) Translates to: EVPDISLQPKTQ*KSRIGTCGEDN Trigger: GTTGTCTTCGCCACAGGTGCCTATCCTCGACTTTCATTGAGTTTTCGGTTGAAGAGAAATATCGGGTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS TCA 72 bp | TCTGCCTTTGGGGACCTCTTCCAAAGAAAATGTAGTTaGCAAAGGCGTACTCCAGAAGTGCCAGGAATACAA | + |
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Preference number: 6 (lower is better) Translates to: SAFGDLFQRKCS*QRRTPEVPGIQ Trigger: TTGTATTCCTGGCACTTCTGGAGTACGCCTTTGTCAACTACATTTTCTTTGGAAGAGGTCCCCAAAGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CCA 72 bp | GGATTCCTGAGTTGTCAAAGGATATTGCTGAATTCCTaGTGTCACCAACGCTGCCTGCAACCTCATTCATTT | + |
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Preference number: 6 (lower is better) Translates to: GFLSCQRILLNS*CHQRCLQPHSF Trigger: AAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAGGAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS CAA 72 bp | GTTTCCTATACTGGATTCCTGAGTTGTCAAAGGATATaGCTGAATTCCTGGTGTCACCAACGCTGCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VSYTGFLSCQRI*LNSWCHQRCLQ Trigger: TTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTGACAACTCAGGAATCCAGTATAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS GCA 72 bp | CAAAGGATATTGCTGAATTCCTGGTGTCACCAACGCTaGCTGCAACCTCATTCATTTCATTGTGAACATCCA | + |
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Preference number: 6 (lower is better) Translates to: QRILLNSWCHQR*LQPHSFHCEHP Trigger: TGGATGTTCACAATGAAATGAATGAGGTTGCAGGCAGCGTTGGTGACACCAGGAATTCAGCAATATCCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000196198.5 |
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| CDS TCA 72 bp | GAGAGGATTGTGATCAGGATTGAGGGCATATACGTCTaGAGAATGAAGTACCCGATATTTCTCTTCAACCGA | + |
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Preference number: 6 (lower is better) Translates to: ERIVIRIEGIYV*RMKYPIFLFNR Trigger: TCGGTTGAAGAGAAATATCGGGTACTTCATTCTTCAGACGTATATGCCCTCAATCCTGATCACAATCCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039697.14 ENSMUST00000085240.11 ENSMUST00000138350.2 ENSMUST00000196198.5 |
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