Pregenerated sensors for GABRB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007653Ensembl transcript IDs: ENSMUST00000007797.10, ENSMUST00000192403.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCAGCCATTGATGCCAGTTCTCTTCACTTCTGTACCATGAGCTaGGAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: TAAIDASSLHFCTMS*EGNTHSSQPRSNPR Trigger: ACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTCCCAGCTCATGGTACAGAAGTGAAGAGAACTGGCATCAATGGCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 90 bp | CAAGGGCAAATCAATCTGTTTCCTTCTAGTCTTTCTGCTCAGCGCTaGGTTCAGACCAGATGCTGTGTAGCAGTGACAAGGGTCACACTT | + |
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Preference number: 1 (lower is better) Translates to: QGQINLFPSSLSAQR*VQTRCCVAVTRVTL Trigger: AAGTGTGACCCTTGTCACTGCTACACAGCATCTGGTCTGAACCCAGCGCTGAGCAGAAAGACTAGAAGGAAACAGATTGATTTGCCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR GCA 90 bp | GGCTCAGACCTCAAAGTCCATATTGAAGTAGCATGTTCGCATTATTaGAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: GSDLKVHIEVACSHY*RKCFISTVGVPTAC Trigger: GCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGCGAACATGCTACTTCAATATGGACTTTGAGGTCTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 90 bp | AGTAGCATGTTCGCATTATTGCAGAAAATGTTTCATAAGCACAGTTaGTGTCCCAACGGCATGCCAATCTTAGGAACAATGATGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSMFALLQKMFHKHS*CPNGMPILGTMMEG Trigger: GCCTTCCATCATTGTTCCTAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGCGAACATGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 90 bp | ACACTTGATCTTGCCAGCATGTGTACAAATCACTTGCATTGTAACTaGAAAACCGCGAGGACCTTAGTGTATTCCTTACTTAGTAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: TLDLASMCTNHLHCN*KTARTLVYSLLSRS Trigger: GCTTCTACTAAGTAAGGAATACACTAAGGTCCTCGCGGTTTTCCAGTTACAATGCAAGTGATTTGTACACATGCTGGCAAGATCAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 90 bp | CTCCACGACATCATCATCATCTGGCTCAGACCTCAAAGTCCATATTaGAGTAGCATGTTCGCATTATTGCAGAAAATGTTTCATAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LHDIIIIWLRPQSPY*SSMFALLQKMFHKH Trigger: GTGCTTATGAAACATTTTCTGCAATAATGCGAACATGCTACTTCAATATGGACTTTGAGGTCTGAGCCAGATGATGATGATGTCGTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 90 bp | ACTTGGTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTaGACCGAGCTCCATGCTATTAACTTTTATTTTAACCACCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: TWLFHSFLTSVISGL*TELHAINFYFNHLG Trigger: TCCAAGGTGGTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAACCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTTTTCATAAGCACAGTTaGTGTCCCAACGGCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: KASSQGLSKASPGLSPNSFHKHS*CPNGMP Trigger: TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAA...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTCCTCAAAGTCCATATTaGAGTAGCATGTTCGCATTA | + |
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Preference number: 2 (lower is better) Translates to: KASSQGLSKASPGLSPNSPQSPY*SSMFAL Trigger: TAATGCGAACATGCTACTTCAATATGGACTTTGAGG...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGTGCCCACTACTTTTTGGAAACAGCTTTTTaGCAAGATGTTAACTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: EGNTHSSQPRSNPRAHYFLETAF*QDVNFG Trigger: GCCAAAGTTAACATCTTGTCAAAAAGCTGTTTCCAA...AAAGTAGTGGGCACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR GCA 90 bp | GCATTATTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAGAGGAATCCAGTCCTTaGTTCTCACGGAAGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ALLQKMFHKHSWCPNGMPEESSP*FSRKAV Trigger: TACAGCCTTCCGTGAGAAGCAAGGACTGGATTCCTC...TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGGCTGTACAACTGTTTaGAGAGGAATCCAGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HLVVSLFLNLGHFWTLDRGCTTV*RGIQSL Trigger: CAAGGACTGGATTCCTCTTCAAACAGTTGTACAGCC...TCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAACCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACCCCCTAAGGCCCACATaGAAGACATGCTTGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SVISGLWTELHAINFYFNPLRPT*KTCLPV Trigger: AACTGGCAAGCATGTCTTTCATGTGGGCCTTAGGGG...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACGCAACCCAAATGGTATaGAATGGACCACAGGATAGG | + |
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Preference number: 2 (lower is better) Translates to: SVISGLWTELHAINFYFNATQMV*NGPQDR Trigger: CCTATCCTGTGGTCCATTTCATACCATTTGGGTTGC...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATCACCACAGCAGCCATTaGTGCCAGTTCTCTTCACTT | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNHHSSH*CQFSSL Trigger: AAGTGAAGAGAACTGGCATCAATGGCTGCTGTGGTG...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATAGCAAAGTCATCCTCTaGGGTAAAGGCCAATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNSKVIL*GKGQSE Trigger: CTCTGATTGGCCTTTACCTCAGAGGATGACTTTGCT...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CCA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACGACATCATCATCATCTaGCTCAGACCTCAAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SVISGLWTELHAINFYFNDIIII*LRPQSP Trigger: TGGACTTTGAGGTCTGAGCCAGATGATGATGATGTC...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATGAAGGCGTTTGGAAATaGCTGTGTCTCAGAGAATTG | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNEGVWK*LCLREL Trigger: CAATTCTCTGAGACACAGTCATTTCCAAACGCCTTC...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATACTTTTGTCCTGGATTaGTGTGTTTTCCAAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNTFVLD*CVFQVL Trigger: TAGGACTTGGAAAACACATCAATCCAGGACAAAAGT...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATTGTGTACAAATCACTTaGATTGTAACTGGAAAACCG | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNCVQIT*IVTGKP Trigger: CGGTTTTCCAGTTACAATGCAAGTGATTTGTACACA...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATGCATGTTCGCATTATTaGAGAAAATGTTTCATAAGC | + |
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Preference number: 2 (lower is better) Translates to: MFTILGLLIMRGKIHLQNACSHY*RKCFIS Trigger: GCTTATGAAACATTTTCTGCAATAATGCGAACATGC...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 72 bp | ATTGATGCCAGTTCTCTTCACTTCTGTACCATGAGCTaGGAGGGCAACACTCACTCATCACAGCCCCGTTCT | + |
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Preference number: 3 (lower is better) Translates to: IDASSLHFCTMS*EGNTHSSQPRS Trigger: AGAACGGGGCTGTGATGAGTGAGTGTTGCCCTCCCAGCTCATGGTACAGAAGTGAAGAGAACTGGCATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGTGCCCACTACTTTCACTTTTGTCCTGGATaGATGTGTTTTCCAAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EGNTHSSQPRSNPRAHYFHFCPG*MCFPSP Trigger: AGGACTTGGAAAACACATCAATCCAGGACAAAAGTG...AAAGTAGTGGGCACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | GTCTACTCAGAGATCTTCCTCCCCCTAAGGCCCACATaGAAGACATGCTTGCCAGTTCATTGTAGGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: VYSEIFLPLRPT*KTCLPVHCRQS Trigger: TGATTGCCTACAATGAACTGGCAAGCATGTCTTTCATGTGGGCCTTAGGGGGAGGAAGATCTCTGAGTAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | AAAGGCAGGATAATGACGATCCACCACAGCAGCCATTaGTGCCAGTTCTCTTCACTTCTGTACCATGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KGRIMTIHHSSH*CQFSSLLYHEL Trigger: CAGCTCATGGTACAGAAGTGAAGAGAACTGGCATCAATGGCTGCTGTGGTGGATCGTCATTATCCTGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGTGCCCACTACTTTGTGCATACACAAGCCTaGAAGAATACAAAAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: EGNTHSSQPRSNPRAHYFVHTQA*KNTKEK Trigger: CTTTTCTTTTGTATTCTTCAAGGCTTGTGTATGCAC...AAAGTAGTGGGCACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | TGTTTTCCAAGTCCTACATCAGGCTGTACAACTGTTTaGAGAGGAATCCAGTCCTTGCTTCTCACGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: CFPSPTSGCTTV*RGIQSLLLTEG Trigger: GCCTTCCGTGAGAAGCAAGGACTGGATTCCTCTTCAAACAGTTGTACAGCCTGATGTAGGACTTGGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 72 bp | GACCAGATGCTGTGTAGCAGTGACAAGGGTCACACTTaGTTGTTTCACTCTTTCTTAACCTCGGTCATTTCT | + |
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Preference number: 3 (lower is better) Translates to: DQMLCSSDKGHT*LFHSFLTSVIS Trigger: AGAAATGACCGAGGTTAAGAAAGAGTGAAACAACCAAGTGTGACCCTTGTCACTGCTACACAGCATCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CAA 90 bp | ACATGCTTGCCAGTTCATTGTAGGCAATCAAACAGACCAGATAAACTGGATTCCAGGCTGTACAACTGTTaGAAGAGGAATCCAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: TCLPVHCRQSNRPDKLDSRLYNC*KRNPVL Trigger: AAGGACTGGATTCCTCTTCAAACAGTTGTACAGCCT...GGAATCCAGTTTATCTGGTCTGTTTGATTGCCTACAATGAACTGGCAAGCATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR-3UTR CAA 90 bp | CACTTGGTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGACAAGATGTTAACTTaGGCTGCTGTACATGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: HLVVSLFLNLGHFWTLDRDKMLT*AAVHGL Trigger: TAGACCATGTACAGCAGCCAAAGTTAACATCTTGTC...TCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAACCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | TGGAAGGCGTTTGGAAATGACTGTGTCTCAGAGAATTaGCTGCCCATGCTATTGAGCTTTCTAGTATCATCT | + |
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Preference number: 3 (lower is better) Translates to: WKAFGNDCVSEN*LPMLLSFLVSS Trigger: AGATGATACTAGAAAGCTCAATAGCATGGGCAGTCAATTCTCTGAGACACAGTCATTTCCAAACGCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | CCAATCTTAGGAACAATGATGGAAGGCGTTTGGAAATaGCTGTGTCTCAGAGAATTGACTGCCCATGCTATT | + |
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Preference number: 3 (lower is better) Translates to: PILGTMMEGVWK*LCLRELTAHAI Trigger: AATAGCATGGGCAGTCAATTCTCTGAGACACAGTCATTTCCAAACGCCTTCCATCATTGTTCCTAAGATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 72 bp | CTTGCCAGCATGTGTACAAATCACTTGCATTGTAACTaGAAAACCGCGAGGACCTTAGTGTATTCCTTACTT | + |
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Preference number: 3 (lower is better) Translates to: LASMCTNHLHCN*KTARTLVYSLL Trigger: AAGTAAGGAATACACTAAGGTCCTCGCGGTTTTCCAGTTACAATGCAAGTGATTTGTACACATGCTGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | TGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATaGAATGGACCACAGGATAGGCCAGCAACTAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: CIPYLVEATQMV*NGPQDRPATKV Trigger: TACCTTAGTTGCTGGCCTATCCTGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 72 bp | TTCGCATTATTGCAGAAAATGTTTCATAAGCACAGTTaGTGTCCCAACGGCATGCCAATCTTAGGAACAATG | + |
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Preference number: 3 (lower is better) Translates to: FALLQKMFHKHS*CPNGMPILGTM Trigger: CATTGTTCCTAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR TCA 72 bp | TCTAACCCTCGTGCCCACTACTTTCCATGTTTTGCTTaGTTAAGTAGACTGCAATATATACAACGTAAACAC | + |
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Preference number: 3 (lower is better) Translates to: SNPRAHYFPCFA*LSRLQYIQRKH Trigger: GTGTTTACGTTGTATATATTGCAGTCTACTTAATCAAGCAAAACATGGAAAGTAGTGGGCACGAGGGTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR GCA 72 bp | CTCAAAGTCCATATTGAAGTAGCATGTTCGCATTATTaGAGAAAATGTTTCATAAGCACAGTTGGTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LKVHIEVACSHY*RKCFISTVGVP Trigger: TGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGCGAACATGCTACTTCAATATGGACTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CCA 72 bp | TTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTaGACCGAGCTCCATGCTATTAACTTTTATTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: FHSFLTSVISGL*TELHAINFYFN Trigger: GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTTCAGGCACCCAGAGTTaGTCTGCCACTCGGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KASSQGLSKASPGLSPNSSGTQS*SATRLS Trigger: GGACAACCGAGTGGCAGACCAACTCTGGGTGCCTGA...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTGGGGGTCCATCTTGTTaGCATCCAGGCGCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KASSQGLSKASPGLSPNSGGPSC*HPGASS Trigger: AGAAGATGCGCCTGGATGTCAACAAGATGGACCCCC...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR GCA 90 bp | TGGGTTCAGACCAGATGCTGTGTAGCAGTGACAAGGGTCACACTTGGTTGTTTCAGCAGCTTTCTCAGCTaGTTTCTTTTGGCGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WVQTRCCVAVTRVTLGCFSSFLS*FLLALG Trigger: CCCCAGCGCCAAAAGAAAGCAGCTGAGAAAGCTGCT...GAAACAACCAAGTGTGACCCTTGTCACTGCTACACAGCATCTGGTCTGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR CCA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTAGAGTTTCCCGGAGGTaGGTGTTGATTGTGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: KASSQGLSKASPGLSPNSRVSRR*VLIVVI Trigger: AATGACCACAATCAACACCCACCTCCGGGAAACTCT...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR TCA 90 bp | TGGGTTCAGACCAGATGCTGTGTAGCAGTGACAAGGGTCACACTTGGTTGTTTCATGGTGATTTTCAGTTaGGAGGCACGTCTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: WVQTRCCVAVTRVTLGCFMVIFS*EARLLR Trigger: CCTGAGGAGACGTGCCTCTCAACTGAAAATCACCAT...GAAACAACCAAGTGTGACCCTTGTCACTGCTACACAGCATCTGGTCTGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR GCA 90 bp | GTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGCTCCATGTCACTCCTGTGACTaGATTGTCATCGCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: VVSLFLNLGHFWTLDRAPCHSCD*IVIAAP Trigger: TGGCGCGGCGATGACAATGCAGTCACAGGAGTGACA...TGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR TCA 90 bp | GCATTATTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAGGGTCATTGACACTCTaGGCACAGACAGCGGCGATT | + |
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Preference number: 4 (lower is better) Translates to: ALLQKMFHKHSWCPNGMPGSLTL*AQTAAI Trigger: AATCGCCGCTGTCTGTGCTCAGAGTGTCAATGACCC...TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR CCA 90 bp | GAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGTGCCCACTACTTTTGGGATAAGAACCTGTaGAGAAAACAACTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: EGNTHSSQPRSNPRAHYFWDKNL*RKQLSW Trigger: CCAAGAAAGTTGTTTTCTCCACAGGTTCTTATCCCA...AAAGTAGTGGGCACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS-3UTR CCA 90 bp | ACATGCTTGCCAGTTCATTGTAGGCAATCAAACAGACCAGATAAACTGGATTCCTCAGCTGCTTTCTTTTaGCGCTGGGGTCCTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCLPVHCRQSNRPDKLDSSAAFF*RWGPLP Trigger: TGGGAGAGGACCCCAGCGCCAAAAGAAAGCAGCTGA...GGAATCCAGTTTATCTGGTCTGTTTGATTGCCTACAATGAACTGGCAAGCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| 3UTR CAA 72 bp | GTGTTTTCCAAGTCCTACATCAGGCTGTACAACTGTTaGAAGAGGAATCCAGTCCTTGCTTCTCACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFSKSYIRLYNC*KRNPVLASHGR Trigger: CCTTCCGTGAGAAGCAAGGACTGGATTCCTCTTCAAACAGTTGTACAGCCTGATGTAGGACTTGGAAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| 3UTR CAA 72 bp | CGGCATGCCAATCTTAGGAACAATGATGGAAGGCGTTaGGAAATGACTGTGTCTCAGAGAATTGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHANLRNNDGRR*EMTVSQRIDCP Trigger: TGGGCAGTCAATTCTCTGAGACACAGTCATTTCCAAACGCCTTCCATCATTGTTCCTAAGATTGGCATGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR GCA 90 bp | TTGATCTTGCCAGCATGTGTACAAATCACTTGCATTGTAACTGGAAAACCGCGATTGCGGCCAAAACTATaGCTAGGCAGCCCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LILPACVQITCIVTGKPRLRPKL*LGSPAF Trigger: AAAAGCTGGGCTGCCTAGGCATAGTTTTGGCCGCAA...TCGCGGTTTTCCAGTTACAATGCAAGTGATTTGTACACATGCTGGCAAGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR GCA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTAGCGACTTTTCTTTTGTaGCACATGTCGCTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKMFHKHSWCPNGMPILATFLL*HMSLQS Trigger: GCTCTGGAGCGACATGTGGCACAAAAGAAAAGTCGC...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCAGACCAGATGCTGTGTAGCAGTGACAAGGGTCACACTTGGTTGTTTCCACTCCATGTACAAATaGCTTCTTATCATTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVQTRCCVAVTRVTLGCFHSMYK*LLIIQE Trigger: TTCCTGAATGATAAGAAGTCATTTGTACATGGAGTG...GAAACAACCAAGTGTGACCCTTGTCACTGCTACACAGCATCTGGTCTGAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | GCATTATTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAGCCAATAGACGATGTTaGAGAAGGAAAACACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLQKMFHKHSWCPNGMPANRRC*RRKTPQ Trigger: CTGTGGTGTTTTCCTTCTTCAACATCGTCTATTGGC...TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR GCA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACCATAGGCAAGCATTGTaGTCCTGGGGTCTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVISGLWTELHAINFYFNHRQAL*SWGLQV Trigger: GACTTGGAGACCCCAGGAGCACAATGCTTGCCTATG...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR GCA 90 bp | GCATTATTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCACTTTTCGATACTGGATaGTGGAGGCATCATAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLQKMFHKHSWCPNGMPLFDTG*WRHHRQ Trigger: TTGCCTATGATGCCTCCAGCATCCAGTATCGAAAAG...TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTATTCGATACTGGATGCTaGAGGCATCATAGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQKMFHKHSWCPNGMPILFDTGC*RHHRQA Trigger: TGCTTGCCTATGATGCCTCCAGCATCCAGTATCGAA...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | GTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGCTCCAAATGGTAATCAGAATTaGTGGCATGTATGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVSLFLNLGHFWTLDRAPNGNQN*WHVCLQ Trigger: CTGCAGACATACATGCCATCAATTCTGATTACCATT...TGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR GCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATCCACAGGGAAGAAAATaGGGGACCACCGATCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MFTILGLLIMRGKIHLQNPQGRK*GTTDQW Trigger: CCATTGATCGGTGGTCCCGCATTTTCTTCCCTGTGG...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTAGGGACCTCCAAAATCTaGTCTCAGACGAATGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQKMFHKHSWCPNGMPILGTSKI*SQTNVI Trigger: TATGACATTCGTCTGAGACCAGATTTTGGAGGTCCC...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTAAGCTTAGGGACAATCTaGGATAAGAACCTGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKMFHKHSWCPNGMPILSLGTI*DKNLWR Trigger: TCTCCACAGGTTCTTATCCCAGATTGTCCCTAAGCT...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACAGCTTTCTTTTGGCGCTaGGGTCCTCTCCCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTAFFWR*GPLPKK Trigger: CTTCTTTGGGAGAGGACCCCAGCGCCAAAAGAAAGC...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | GTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGCTCCAAGGTATAGTCCATATTaGCCTCAGAAACCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVSLFLNLGHFWTLDRAPRYSPY*PQKPYQ Trigger: TTGATATGGTTTCTGAGGTCAATATGGACTATACCT...TGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | GCATTATTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCACAAAGAAGATGTAGTTaGCCAAAGCGTATTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLQKMFHKHSWCPNGMPQRRCS*PKRIPE Trigger: TTCTGGAATACGCTTTGGTCAACTACATCTTCTTTG...TGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAATAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATCAAGCATTGTGCTCCTaGGGTCTCCAAGTCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: MFTILGLLIMRGKIHLQNQALCS*GLQVPL Trigger: TAATGGGACTTGGAGACCCCAGGAGCACAATGCTTG...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTAGAATCATACGGTTTTTaGCAGTCACTCCATGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQKMFHKHSWCPNGMPILESYGF*QSLHVQ Trigger: TTGTACATGGAGTGACTGTCAAAAACCGTATGATTC...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACATCTACGATGGAGAACTaGGGAAGCTCAATCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTSTMEN*GSSIFV Trigger: GACAAAGATTGAGCTTCCTCAGTTCTCCATCGTAGA...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACATTATCTCAAGCGTGCTaGGTAAGATGTTCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTLSQAC*VRCSHG Trigger: CCCATGAGAACATCTTACTCAGCACGCTTGAGATAA...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTGCCAGTTCATTGTAGGCAATCAAACAGACCAGATAAACTGGATTCCGTTTATAATCTACGATaGAGAACTGAGGAAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCLPVHCRQSNRPDKLDSVYNLR*RTEEAQ Trigger: TTGAGCTTCCTCAGTTCTCCATCGTAGATTATAAAC...GGAATCCAGTTTATCTGGTCTGTTTGATTGCCTACAATGAACTGGCAAGCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| 3UTR CAA 72 bp | CATTGTGCTCAAAATGCATATGAATCTATTAGACCCTaGAGAATCACCACTCCACGACATCATCATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCAQNAYESIRP*RITTPRHHHHL Trigger: CAGATGATGATGATGTCGTGGAGTGGTGATTCTCAAGGGTCTAATAGATTCATATGCATTTTGAGCACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR TCA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATTGTATGTCTGCAGGATaGAGTAGCCAATGTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MFTILGLLIMRGKIHLQNCMSAG*SSQCSF Trigger: AAAGGAACATTGGCTACTTCATCCTGCAGACATACA...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACAAGTAAGATGTTCTCATaGGGGTCCATCTTGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTSKMFS*GSILLT Trigger: TGTCAACAAGATGGACCCCCATGAGAACATCTTACT...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| 3UTR CAA 72 bp | TGTGTACTAAAACTGGTAAAGTGGAATACTTCACACTaGATCTTGCCAGCATGTGTACAAATCACTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CVLKLVKWNTSH*ILPACVQITCI Trigger: AATGCAAGTGATTTGTACACATGCTGGCAAGATCAAGTGTGAAGTATTCCACTTTACCAGTTTTAGTACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS GCA 90 bp | CAGCTTTTCGATACTGGATGCTGGAGGCATCATAGGCAAGCATTGTaGTCCTGGGGTCTCCAAGTCCCATTACTGCTTCGGATGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLFDTGCWRHHRQAL*SWGLQVPLLLRMWP Trigger: TGGCCACATCCGAAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCCAGTATCGAAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS CCA 90 bp | TTCGATACTGGATGCTGGAGGCATCATAGGCAAGCATTGTGCTCCTaGGGTCTCCAAGTCCCATTACTGCTTCGGATGTGGCCATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FDTGCWRHHRQALCS*GLQVPLLLRMWPSR Trigger: ACGAGATGGCCACATCCGAAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCCAGTATCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAGTTCACAGGGTCTCAGCAAAGCCTCACCGGGGCTGTCTCCTAATAGTCATCATAGGCAAGCATaGTGCTCCTGGGGTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KASSQGLSKASPGLSPNSHHRQA*CSWGLQ Trigger: TTGGAGACCCCAGGAGCACAATGCTTGCCTATGATG...ACTATTAGGAGACAGCCCCGGTGAGGCTTTGCTGAGACCCTGTGAACTGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | GTTGTTTCACTCTTTCTTAACCTCGGTCATTTCTGGACTTTGGACCGAGCTCCACTCAGCTGCTTTCTTTaGGCGCTGGGGTCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSLFLNLGHFWTLDRAPLSCFL*ALGSSP Trigger: GGGAGAGGACCCCAGCGCCAAAAGAAAGCAGCTGAG...TGGAGCTCGGTCCAAAGTCCAGAAATGACCGAGGTTAAGAAAGAGTGAAACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAACACTCACTCATCACAGCCCCGTTCTAACCCTCGTGCCCACTACTTTCTTGTCTCTCCAGGCTaGCTGAAAATACATGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: EGNTHSSQPRSNPRAHYFLVSPG*LKIHGQ Trigger: TTGACCATGTATTTTCAGCAAGCCTGGAGAGACAAG...AAAGTAGTGGGCACGAGGGTTAGAACGGGGCTGTGATGAGTGAGTGTTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCTTGCCAGCATGTGTACAAATCACTTGCATTGTAACTGGAAAACCGCGATGGGGGTCCATCTTGTaGACATCCAGGCGCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LILPACVQITCIVTGKPRWGSIL*TSRRIF Trigger: GAAGATGCGCCTGGATGTCAACAAGATGGACCCCCA...TCGCGGTTTTCCAGTTACAATGCAAGTGATTTGTACACATGCTGGCAAGATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TTGCAGAAAATGTTTCATAAGCACAGTTGGTGTCCCAACGGCATGCCAATCTTATGTCGCTCCAGAGCGTaGCGGCCAAAACTATGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQKMFHKHSWCPNGMPILCRSRA*RPKLCL Trigger: TAGGCATAGTTTTGGCCGCAACGCTCTGGAGCGACA...TAAGATTGGCATGCCGTTGGGACACCAACTGTGCTTATGAAACATTTTCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACAGTCAGGCACCCAGAGTaGGTCTGCCACTCGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTVRHPE*VCHSVV Trigger: GACAACCGAGTGGCAGACCAACTCTGGGTGCCTGAC...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCTTGCCAGCATGTGTACAAATCACTTGCATTGTAACTGGAAAACCGCGACAGGCGACTTTTCTTTaGTGCCACATGTCGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LILPACVQITCIVTGKPRQATFL*CHMSLQ Trigger: CTGGAGCGACATGTGGCACAAAAGAAAAGTCGCCTG...TCGCGGTTTTCCAGTTACAATGCAAGTGATTTGTACACATGCTGGCAAGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACTCCCGGAGGTGGGTGTaGATTGTGGTCATTGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVISGLWTELHAINFYFNSRRWV*IVVIVR Trigger: CCTAACAATGACCACAATCAACACCCACCTCCGGGA...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTATTCCTTACTTAGTAGAAGCAACCCAAATGGTATGAAATGGACCACATCATGGGGGTCCATCTaGTTGACATCCAGGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVYSLLSRSNPNGMKWTTSWGSI*LTSRRI Trigger: GATGCGCCTGGATGTCAACAAGATGGACCCCCATGA...TGTGGTCCATTTCATACCATTTGGGTTGCTTCTACTAAGTAAGGAATACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACGATGGTGATTTTCAGTaGAGAGGCACGTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVISGLWTELHAINFYFNDGDFQ*RGTSPQ Trigger: CTGAGGAGACGTGCCTCTCAACTGAAAATCACCATC...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACAGGCGCATCTTCTCATaGTTGGCATTAGCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVISGLWTELHAINFYFNRRIFS*LALAAF Trigger: GAAAGCTGCTAATGCCAACAATGAGAAGATGCGCCT...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACCTCCAATGTACAGTTTaGTTCATCCAGTGGATACCG | + |
|
Preference number: 5 (lower is better) Translates to: SVISGLWTELHAINFYFNLQCTV*FIQWIP Trigger: CGGTATCCACTGGATGAACAAAACTGTACATTGGAG...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | TCGGTCATTTCTGGACTTTGGACCGAGCTCCATGCTATTAACTTTTATTTTAACCGCATCTTCTCATTGTaGGCATTAGCAGCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVISGLWTELHAINFYFNRIFSL*ALAAFS Trigger: TGAGAAAGCTGCTAATGCCAACAATGAGAAGATGCG...GTTAAAATAAAAGTTAATAGCATGGAGCTCGGTCCAAAGTCCAGAAATGACCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS-3UTR CAA 90 bp | ATGTTTACTATCCTAGGGTTGTTAATCATGAGGGGAAAGATTCATCTGCAGAATTGGTCTGCCACTCGGTaGTCCAAAGTCAAGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MFTILGLLIMRGKIHLQNWSATR*SKVKFK Trigger: TTTAAACTTGACTTTGGACAACCGAGTGGCAGACCA...ATTCTGCAGATGAATCTTTCCCCTCATGATTAACAACCCTAGGATAGTAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
||
| CDS GCA 72 bp | GCCACATGTCGCTCCAGAGCGTTGCGGCCAAAACTATaGCTAGGCAGCCCAGCTTTTCGATACTGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATCRSRALRPKL*LGSPAFRYWML Trigger: CAGCATCCAGTATCGAAAAGCTGGGCTGCCTAGGCATAGTTTTGGCCGCAACGCTCTGGAGCGACATGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS CCA 72 bp | GGATGCTGGAGGCATCATAGGCAAGCATTGTGCTCCTaGGGTCTCCAAGTCCCATTACTGCTTCGGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCWRHHRQALCS*GLQVPLLLRMW Trigger: CCACATCCGAAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS CAA 72 bp | CAGTTGAGAGGCACGTCTCCTCAGGCGACTTTTCTTTaGTGCCACATGTCGCTCCAGAGCGTTGCGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLRGTSPQATFL*CHMSLQSVAAK Trigger: TTTGGCCGCAACGCTCTGGAGCGACATGTGGCACAAAAGAAAAGTCGCCTGAGGAGACGTGCCTCTCAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS CAA 90 bp | GCCCAGCTTTTCGATACTGGATGCTGGAGGCATCATAGGCAAGCATaGTGCTCCTGGGGTCTCCAAGTCCCATTACTGCTTCGGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQLFDTGCWRHHRQA*CSWGLQVPLLLRMW Trigger: CCACATCCGAAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCCAGTATCGAAAAGCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS GCA 72 bp | GATACTGGATGCTGGAGGCATCATAGGCAAGCATTGTaGTCCTGGGGTCTCCAAGTCCCATTACTGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: DTGCWRHHRQAL*SWGLQVPLLLR Trigger: CCGAAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCCAGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
||
| CDS CAA 72 bp | TTCGATACTGGATGCTGGAGGCATCATAGGCAAGCATaGTGCTCCTGGGGTCTCCAAGTCCCATTACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FDTGCWRHHRQA*CSWGLQVPLLL Trigger: AAGCAGTAATGGGACTTGGAGACCCCAGGAGCACAATGCTTGCCTATGATGCCTCCAGCATCCAGTATCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
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| CDS CAA 90 bp | TTCTCATGGGGGTCCATCTTGTTGACATCCAGGCGCATCTTCTCATaGTTGGCATTAGCAGCTTTCTCAGCTGCTTTCTTTTGGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FSWGSILLTSRRIFS*LALAAFSAAFFWRW Trigger: CCAGCGCCAAAAGAAAGCAGCTGAGAAAGCTGCTAATGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATGGACCCCCATGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS GCA 72 bp | GTGATTCTGAGGCCATACAGGACAGTGCCATCGGGATaGAATCGAATCATACGGTTTTTGACAGTCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: VILRPYRTVPSG*NRIIRFLTVTP Trigger: TGGAGTGACTGTCAAAAACCGTATGATTCGATTGCATCCCGATGGCACTGTCCTGTATGGCCTCAGAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007797.10 ENSMUST00000192403.2 |
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| CDS CAA 72 bp | GGGTCCATCTTGTTGACATCCAGGCGCATCTTCTCATaGTTGGCATTAGCAGCTTTCTCAGCTGCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSILLTSRRIFS*LALAAFSAAFF Trigger: AAAGAAAGCAGCTGAGAAAGCTGCTAATGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATGGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS CAA 72 bp | TCCATCTTGTTGACATCCAGGCGCATCTTCTCATTGTaGGCATTAGCAGCTTTCTCAGCTGCTTTCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SILLTSRRIFSL*ALAAFSAAFFW Trigger: CCAAAAGAAAGCAGCTGAGAAAGCTGCTAATGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007797.10 |
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| CDS CAA 72 bp | AACATCTTGTTGACATCCAGGCGCATCTTCTCATTGTaGGCATTAGCAGCTTTCTCAGCTGCTTTCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: NILLTSRRIFSL*ALAAFSAAFFW Trigger: CCAAAAGAAAGCAGCTGAGAAAGCTGCTAATGCCAACAATGAGAAGATGCGCCTGGATGTCAACAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192403.2 |
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| CDS CAA 90 bp | GAGGTCTCCAGTAGGGTCCCACAAGGATCGATACTGGGTCCCATTTaGTTTAATATCTTTATAAAACATCTTGTTGACATCCAGGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: EVSSRVPQGSILGPI*FNIFIKHLVDIQAH Trigger: ATGCGCCTGGATGTCAACAAGATGTTTTATAAAGATATTAAACAAAATGGGACCCAGTATCGATCCTTGTGGGACCCTACTGGAGACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192403.2 |
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