Pregenerated sensors for GABRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029212Ensembl transcript IDs: ENSMUST00000031122.9, ENSMUST00000199967.5
Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGCCTTCTAGGGAGCTGCTGTCCCTGTCAGTGGGTAAAGGCATaGGGCAGTGATCACAGACACCTGGCTATGGCTTACAGCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: GSLLGSCCPCQWVKA*GSDHRHLAMAYSRV Trigger: GACTCTGCTGTAAGCCATAGCCAGGTGTCTGTGATCACTGCCTCATGCCTTTACCCACTGACAGGGACAGCAGCTCCCTAGAAGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | AGTCTGCGAAGTAACAGAAGGTGTGTGTTTCTTCCTGCGTGGATGTaGCACCTGCTTTGGAAGCCACAGGCCATCGAACGCAGGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLRSNRRCVFLPAWM*HLLWKPQAIERRVL Trigger: CAGCACCCTGCGTTCGATGGCCTGTGGCTTCCAAAGCAGGTGCCACATCCACGCAGGAAGAAACACACACCTTCTGTTACTTCGCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TGGCACCTGCTTTGGAAGCCACAGGCCATCGAACGCAGGGTGCTGTaGATTAAAGTAGCAGACGCTGGTTTGGTGGGTTTGGGTGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: WHLLWKPQAIERRVL*IKVADAGLVGLGEF Trigger: AAACTCACCCAAACCCACCAAACCAGCGTCTGCTACTTTAATTCACAGCACCCTGCGTTCGATGGCCTGTGGCTTCCAAAGCAGGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | GAAGTAACAGAAGGTGTGTGTTTCTTCCTGCGTGGATGTGGCACCTaGTTTGGAAGCCACAGGCCATCGAACGCAGGGTGCTGTGAATTA | + |
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Preference number: 1 (lower is better) Translates to: EVTEGVCFFLRGCGT*FGSHRPSNAGCCEL Trigger: TAATTCACAGCACCCTGCGTTCGATGGCCTGTGGCTTCCAAAGCAGGTGCCACATCCACGCAGGAAGAAACACACACCTTCTGTTACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | CAGAGTTCAGAGAGCAGATGCAAAAAGTGCCCACAGAGTCCTATGTaGAGAGCTCGCCGCTGTTTAGACACTGCTCTCTGGAAGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: QSSESRCKKCPQSPM*RARRCLDTALWKAK Trigger: CTTAGCCTTCCAGAGAGCAGTGTCTAAACAGCGGCGAGCTCTTCACATAGGACTCTGTGGGCACTTTTTGCATCTGCTCTCTGAACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TGGAAGCGCGTTCTGTGCTGTAACAGCCCACACGCTGGAGACTTTTaGAAGGACTCTGAAAACTTGGAGGGAGCAATACCTGGAATCGTT | + |
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Preference number: 1 (lower is better) Translates to: WKRVLCCNSPHAGDF*KDSENLEGAIPGIV Trigger: AACGATTCCAGGTATTGCTCCCTCCAAGTTTTCAGAGTCCTTTCAAAAGTCTCCAGCGTGTGGGCTGTTACAGCACAGAACGCGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TTCCATTTCAGCAGCTTTGTAGTTCCAAACAGAGCTGATGGCATCTaGCACCAGCCTTTCCAATGCGCCATCTGCCTTTCATTTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FHFSSFVVPNRADGI*HQPFQCAICLSFAA Trigger: TGCAGCAAATGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGTCAGATGCCATCAGCTCTGTTTGGAACTACAAAGCTGCTGAAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | TCCACGCCTCAGGGGCTGGTGGGCGTTGCTAAAGGCTCAGTGTGTTaGCATTTCAGAGTTTCTTTTCTTTCTGTGATTTGGCTATACTTT | + |
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Preference number: 1 (lower is better) Translates to: STPQGLVGVAKGSVC*HFRVSFLSVIWLYF Trigger: AAAGTATAGCCAAATCACAGAAAGAAAAGAAACTCTGAAATGGCAACACACTGAGCCTTTAGCAACGCCCACCAGCCCCTGAGGCGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | TCTATTGTGTCCAGGGATTGTCCATGGCAAAGCATCTTGGCTTGCTaGAAGCTGAGCAGAGCTTTTTACAAAGATGACCCTTTGACCCCA | + |
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Preference number: 1 (lower is better) Translates to: SIVSRDCPWQSILAC*KLSRAFYKDDPLTP Trigger: TGGGGTCAAAGGGTCATCTTTGTAAAAAGCTCTGCTCAGCTTCCAGCAAGCCAAGATGCTTTGCCATGGACAATCCCTGGACACAATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | ATATATGGGTGTTTTTCTCTTCTGTTCATTCAGGAAACTGCTGATTaGACCACCTTGAGCAAGTGGTTGCACGCTCCTTTCACCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: IYGCFSLLFIQETAD*TTLSKWLHAPFTPP Trigger: GGGAGGGGTGAAAGGAGCGTGCAACCACTTGCTCAAGGTGGTTCAATCAGCAGTTTCCTGAATGAACAGAAGAGAAAAACACCCATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TCCGATATATGGGTGTTTTTCTCTTCTGTTCATTCAGGAAACTGCTaGTTGAACCACCTTGAGCAAGTGGTTGCACGCTCCTTTCACCCC | + |
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Preference number: 1 (lower is better) Translates to: SDIWVFFSSVHSGNC*LNHLEQVVARSFHP Trigger: GGGGTGAAAGGAGCGTGCAACCACTTGCTCAAGGTGGTTCAATCAGCAGTTTCCTGAATGAACAGAAGAGAAAAACACCCATATATCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | AGGGGAGGGAATGAAGATGGGTACTCAGATGGATATTTTGAGTGCTaGTGGCTTGCAACTTATCATCGAGGTGGAATCCTGACCATAAGA | + |
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Preference number: 1 (lower is better) Translates to: RGGNEDGYSDGYFEC*WLATYHRGGILTIR Trigger: TCTTATGGTCAGGATTCCACCTCGATGATAAGTTGCAAGCCAGCAGCACTCAAAATATCCATCTGAGTACCCATCTTCATTCCCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | GGAATCTGTAACTCTGTGTCCCTAAGGCAAATGAACAAGGGTTTTTaGCCTCTCTTGTCTGGACTGACTTGGTCTGATTGTCCACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: GICNSVSLRQMNKGF*PLLSGLTWSDCPQD Trigger: GTCTTGTGGACAATCAGACCAAGTCAGTCCAGACAAGAGAGGCCAAAAACCCTTGTTCATTTGCCTTAGGGACACAGAGTTACAGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | TTCAGGTGTCTATGGTCTCTGAGATCAATGCTTTGTAGTCAGATTTaGATAATGGTGGCTGTGATCCACATACCATTCCATGCCCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: FRCLWSLRSMLCSQI*IMVAVIHIPFHAQW Trigger: CCACTGGGCATGGAATGGTATGTGGATCACAGCCACCATTATGCAAATCTGACTACAAAGCATTGATCTCAGAGACCATAGACACCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | CAAACACAGATTATTCATTCAGCAGGCTTGCCAGCCAACTGCTGTTaGTGTTTGGCAACAGAGGAGATTGAGATACTAATCCTGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: QTQIIHSAGLPANCC*CLATEEIEILILDQ Trigger: CTGATCCAGGATTAGTATCTCAATCTCCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | TGGCATCTGACACCAGCCTTTCCAATGCGCCATCTGCCTTTCATTTaGTGCAACAGGGTAAAATCTTGTATACCAAAGCAAACGATAGCA | + |
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Preference number: 1 (lower is better) Translates to: WHLTPAFPMRHLPFI*CNRVKSCIPKQTIA Trigger: TGCTATCGTTTGCTTTGGTATACAAGATTTTACCCTGTTGCAGCAAATGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGTCAGATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TACCTGGGTCTCTGCCTCACAGAATTGCCAAGCAGAAGGAATACCTaGTGTTTTATGAGCAGTCACAGTTGTCAAGAAAAAGGTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: YLGLCLTELPSRRNT*CFMSSHSCQEKGAD Trigger: ATCTGCACCTTTTTCTTGACAACTGTGACTGCTCATAAAACATCAGGTATTCCTTCTGCTTGGCAATTCTGTGAGGCAGAGACCCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | GAGCCAATTAAAGAGAGCAATGAAAAGCTTAGTGCACAGGAGAGATaGAGCCTGCTTAGGCACAAGATGTGGCTCACAAGGGATAAATCA | + |
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Preference number: 1 (lower is better) Translates to: EPIKESNEKLSAQER*SLLRHKMWLTRDKS Trigger: TGATTTATCCCTTGTGAGCCACATCTTGTGCCTAAGCAGGCTTCATCTCTCCTGTGCACTAAGCTTTTCATTGCTCTCTTTAATTGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | TGTTTATCCAGCACTATAGACTCCCCCTTCCCTCCCTTAACCTTCTaGATGATATACCAGCATCACATCTGCATCACAGTGGCACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: CLSSTIDSPFPPLTF*MIYQHHICITVAQN Trigger: ATTTTGTGCCACTGTGATGCAGATGTGATGCTGGTATATCATTCAGAAGGTTAAGGGAGGGAAGGGGGAGTCTATAGTGCTGGATAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | CTTTATGCATGTGTACACAAACACAGATTATTCATTCAGCAGGCTTaGCAGCCAACTGCTGTTGCTGTTTGGCAACAGAGGAGATTGAGA | + |
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Preference number: 1 (lower is better) Translates to: LYACVHKHRLFIQQA*QPTAVAVWQQRRLR Trigger: TCTCAATCTCCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGTTTGTGTACACATGCATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | AGCCTTTCTGGAAAGGGCTCAGAAGAACTTAGAGAGGATGGGAACTaGCAGTTTTATATACCCTCTTCCTGGAAATCTGCAACTTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SLSGKGSEELREDGN*QFYIPSSWKSATCQ Trigger: TTGACAAGTTGCAGATTTCCAGGAAGAGGGTATATAAAACTGTCAGTTCCCATCCTCTCTAAGTTCTTCTGAGCCCTTTCCAGAAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | CAGGTAATAAATAATACTGCGCCTGTCCATCCTTTCGCTTTGGACTaGGACTGGATTAATGAAGGAATCTGTAACTCTGTGTCCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: QVINNTAPVHPFALD*DWINEGICNSVSLR Trigger: CCTTAGGGACACAGAGTTACAGATTCCTTCATTAATCCAGTCTCAGTCCAAAGCGAAAGGATGGACAGGCGCAGTATTATTTATTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | CTCTTGGCTGTAAGAGCTGACTTCATCCAAGTTTTTGCACTTCCTTaGACTACTCCACCAGCCTGTATTATTGATGTCAGAGGGATTCAA | + |
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Preference number: 1 (lower is better) Translates to: LLAVRADFIQVFALP*TTPPACIIDVRGIQ Trigger: TTGAATCCCTCTGACATCAATAATACAGGCTGGTGGAGTAGTTCAAGGAAGTGCAAAAACTTGGATGAAGTCAGCTCTTACAGCCAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | TGCAGAAATTACTTTGGTTGTCATGTGCGCTGGCTGGAGAACAACTaGGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: CRNYFGCHVRWLENN*EANHHLINFLLWLY Trigger: ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTCCAGCCAGCGCACATGACAACCAAAGTAATTTCTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | ATTTGGCTATACTTTAAAGCTTTTCTTAACCTGGAAATCTGGCTTTaGAGGAAGACATTGATGTGGAGGGTCAGCATTTCCCGGGCCATT | + |
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Preference number: 1 (lower is better) Translates to: IWLYFKAFLNLEIWL*RKTLMWRVSISRAI Trigger: AATGGCCCGGGAAATGCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAAAAGCTTTAAAGTATAGCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | TTAGAAGTGAAAGCTATTGGCAAAAATGAAGCTTTGGATTCCCTGTaGAATTTGAGCATCGCTTCCATCCCTGACTCCTTAAGCAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LEVKAIGKNEALDSL*NLSIASIPDSLSSI Trigger: GATGCTGCTTAAGGAGTCAGGGATGGAAGCGATGCTCAAATTCCACAGGGAATCCAAAGCTTCATTTTTGCCAATAGCTTTCACTTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | GAACAGATTAGTCTGGGAGGTGTTCAGAAGGTAGGACAAAGATCATaGCTCACAAGCAAGACATCTTTCCTTGATGCAATAGTAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: EQISLGGVQKVGQRS*LTSKTSFLDAIVAS Trigger: TGAAGCTACTATTGCATCAAGGAAAGATGTCTTGCTTGTGAGTCATGATCTTTGTCCTACCTTCTGAACACCTCCCAGACTAATCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | GTGGCTAATCTTAAAGGCATGAGACTAAGGCTATTATTAGATTTGTaGGGCTGCATGAACAAGGTCTATGGTGAACCCGCATCATATGGT | + |
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Preference number: 1 (lower is better) Translates to: VANLKGMRLRLLLDL*GCMNKVYGEPASYG Trigger: ACCATATGATGCGGGTTCACCATAGACCTTGTTCATGCAGCCTCACAAATCTAATAATAGCCTTAGTCTCATGCCTTTAAGATTAGCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | GGCTGTGTAACAGCTTTTAAGAACTCAGAGTCTCTTTCATCTAGATaGGTAGTTGCATCTGGCGTGAAAGCTCAAATACATTTGCTCATG | + |
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Preference number: 1 (lower is better) Translates to: GCVTAFKNSESLSSR*VVASGVKAQIHLLM Trigger: CATGAGCAAATGTATTTGAGCTTTCACGCCAGATGCAACTACCCATCTAGATGAAAGAGACTCTGAGTTCTTAAAAGCTGTTACACAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | AAGAGGTACATACAATTCGACTTAAGATTTGGCAGTGCAGATAACTaGCCAGGCACCTTTTACATAACATGTAAGTCTTGCCTTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: KRYIQFDLRFGSADN*PGTFYITCKSCLLQ Trigger: CTGAAGAAGGCAAGACTTACATGTTATGTAAAAGGTGCCTGGGCAGTTATCTGCACTGCCAAATCTTAAGTCGAATTGTATGTACCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | AGCTTCCACCATACACAACCCTTTCTCAAGTTAAATTCCCTCGTTTaGCTTCTCTATCAGTTCACACCCAGAAACTTTTGTCTACCTTTA | + |
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Preference number: 1 (lower is better) Translates to: SFHHTQPFLKLNSLV*LLYQFTPRNFCLPL Trigger: TAAAGGTAGACAAAAGTTTCTGGGTGTGAACTGATAGAGAAGGCAAACGAGGGAATTTAACTTGAGAAAGGGTTGTGTATGGTGGAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | AATAATCCAGGACTTGCCCTGTTTCTGAATATCTTGGATGGTTTGTaGAACCTTGTTGCAGATGTACTGAGTGCTGATAATATTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: NNPGLALFLNILDGL*NLVADVLSADNIQR Trigger: TCTCTGAATATTATCAGCACTCAGTACATCTGCAACAAGGTTGCACAAACCATCCAAGATATTCAGAAACAGGGCAAGTCCTGGATTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR GCA 90 bp | TGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGACAATCCAATaGTGTTTCAACTTCCAATGCCCCACAGAACATACATTCAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: CSLKTAHWSVPLTIQ*CFNFQCPTEHTFKR Trigger: TCTTTTGAATGTATGTTCTGTGGGGCATTGGAAGTTGAAACAGCATTGGATTGTCAATGGAACACTCCAATGTGCAGTCTTAAGAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | AATTCACGAATTGCAAAAGGTATGGGAGTCAATCAAAAATGGTTCTaGGTCTCTTGCTGTGAGTCTCTTAATAAGCCAAAGGCTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: NSRIAKGMGVNQKWF*VSCCESLNKPKASE Trigger: TTCAGAAGCCTTTGGCTTATTAAGAGACTCACAGCAAGAGACTCAGAACCATTTTTGATTGACTCCCATACCTTTTGCAATTCGTGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | CTAAAGGCTCAGTGTGTTGCCATTTCAGAGTTTCTTTTCTTTCTGTaGTTTGGCTATACTTTAAAGCTTTTCTTAACCTGGAAATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LKAQCVAISEFLFFL*FGYTLKLFLTWKSG Trigger: GCCAGATTTCCAGGTTAAGAAAAGCTTTAAAGTATAGCCAAATCACAGAAAGAAAAGAAACTCTGAAATGGCAACACACTGAGCCTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR TCA 90 bp | AGGTGGTTAAAAAGTCTTGCCTCTGAAGACCTTTTAAAGGTACCATaGGTAGGAATTGGGAAGAATTGTTACAATTCATTGTTCATGAGT | + |
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Preference number: 1 (lower is better) Translates to: RWLKSLASEDLLKVP*VGIGKNCYNSLFMS Trigger: ACTCATGAACAATGAATTGTAACAATTCTTCCCAATTCCTACTCATGGTACCTTTAAAAGGTCTTCAGAGGCAAGACTTTTTAACCACCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATaGCTGTATCTAAAATATCAGACCAATTTGATTGTTCAAGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: ENNCEANHHLINFLL*LYLKYQTNLIVQVV Trigger: CACTACTTGAACAATCAAATTGGTCTGATATTTTAGATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CAA 90 bp | AGGAGCAGATTGTCCCAGTTCTGGTTTCTGCTGGTGCTCTGTTCTTaGGCCCCGCAGGTTGGCAGCCTTCTAGGGAGCTGCTGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RSRLSQFWFLLVLCS*APQVGSLLGSCCPC Trigger: ACAGGGACAGCAGCTCCCTAGAAGGCTGCCAACCTGCGGGGCCAAAGAACAGAGCACCAGCAGAAACCAGAACTGGGACAATCTGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CAA 90 bp | GTAATTGCCAATGAGGTGTTTGAATCACTGCCGGCAGCGGTCATTTaGAACCCTTTAATGGGACTTGAGTTCCCAGCTCCCCTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VIANEVFESLPAAVI*NPLMGLEFPAPLSP Trigger: GGGAGAGAGGGGAGCTGGGAACTCAAGTCCCATTAAAGGGTTCAAAATGACCGCTGCCGGCAGTGATTCAAACACCTCATTGGCAATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTAATGACAGTGGTGAATaGGTGGAGACACTTCCGGTC | + |
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Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCNDSGE*VETLPV Trigger: GACCGGAAGTGTCTCCACTCATTCACCACTGTCATT...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTGCTCCGAAGCCTTTCTaGAAAGGGCTCAGAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCAPKPF*KGLRRT Trigger: AGTTCTTCTGAGCCCTTTCCAGAAAGGCTTCGGAGC...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CAA 90 bp | GAAGAGGGAGAAAATCTGAGAAGGAAGGTGCTTCCCTGTCAGTGTTaGGCTTGGGAAGGGAGCAGAGAAGAACAGATTAGTCTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: EEGENLRRKVLPCQC*AWEGSREEQISLGG Trigger: ACCTCCCAGACTAATCTGTTCTTCTCTGCTCCCTTCCCAAGCCAAACACTGACAGGGAAGCACCTTCCTTCTCAGATTTTCTCCCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR-3UTR GCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCACGGCTGGTCAATTTaGGCTCTCACTCAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTHGWSI*ALTQPC Trigger: GCAAGGCTGAGTGAGAGCGCAAATTGACCAGCCGTG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATTTCCCTGTCAGTGTTTaGCTTGGGAAGGGAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHFPVSV*LGKGAE Trigger: CTCTGCTCCCTTCCCAAGCCAAACACTGACAGGGAA...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CAA 90 bp | AGAAAGAAGGCCATGAAGGGACAGAGGGGAGGGACTCAGAGGCCATaGAACAATTCCTCATTCACAAATTCACCGTTTACAGGGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: RKKAMKGQRGGTQRP*NNSSFTNSPFTGRS Trigger: AGACCTCCCTGTAAACGGTGAATTTGTGAATGAGGAATTGTTCAATGGCCTCTGAGTCCCTCCCCTCTGTCCCTTCATGGCCTTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR-3UTR TCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCATCCACCCAGAAGTTaGGGACCACCATACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLHPPRS*GPPYHR Trigger: CCTGTGGTATGGTGGTCCTCAACTTCTGGGTGGATG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| 3UTR CAA 90 bp | GAAACTAATCTCTGTCTTCAATTGCTTGGAGAGTCTGAATTTCTGTaGGTGCTGCCTGCCTCTCTGGGATTGCTAGCATGCATGGAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: ETNLCLQLLGESEFL*VLPASLGLLACMEA Trigger: CGCTTCCATGCATGCTAGCAATCCCAGAGAGGCAGGCAGCACCAACAGAAATTCAGACTCTCCAAGCAATTGAAGACAGAGATTAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTAAGATCCAGGGTAACTaGGAAAGACTGCCAACAATA | + |
|
Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCKIQGN*ERLPTI Trigger: TATTGTTGGCAGTCTTTCTCAGTTACCCTGGATCTT...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCAAAGGCATGAGGCAGTaGTCACAGACACCTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTKGMRQ*SQTPGY Trigger: ATAGCCAGGTGTCTGTGATCACTGCCTCATGCCTTT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCAGCTCACACTACTCTaGACACCGATTCTCTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHQLTLL*TPILFS Trigger: TGAGAAGAGAATCGGTGTGCAGAGTAGTGTGAGCTG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTGAGTTTGGGGAAAAGTaGGAAGAAGCACAAGCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCEFGEK*EEAQAL Trigger: TAAAGCTTGTGCTTCTTCCCACTTTTCCCCAAACTC...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | ATTGATGTGGAGGGTCAGCATTTCCCGGGCCATTCATTTTGTAGCTaGAAATGCAGAGTTCAGAGAGCAGATGCAAAAAGTGCCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: IDVEGQHFPGHSFCS*KCRVQRADAKSAHR Trigger: TCTGTGGGCACTTTTTGCATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATGCTGACCCTCCACATCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | CAGATTATTCATTCAGCAGGCTTGCCAGCCAACTGCTGTTGCTGTTaGGCAACAGAGGAGATTGAGATACTAATCCTGGATCAGTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QIIHSAGLPANCCCC*ATEEIEILILDQSS Trigger: GCTTGACTGATCCAGGATTAGTATCTCAATCTCCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCATGGACACAATAGGGTaGGTTTGGGGAAAAGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTMDTIG*VWGKVG Trigger: TCCCACTTTTCCCCAAACTCACCCTATTGTGTCCAT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTCCATGCCTGGATCGTaGCAACATGGCCTCCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYSMPGS*QHGLHP Trigger: TGGATGGAGGCCATGTTGGCACGATCCAGGCATGGA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCCCAGTTCTGGTTTCTaGTGGTGCTCTGTTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLPSSGF*WCSVLW Trigger: CCAAAGAACAGAGCACCAGCAGAAACCAGAACTGGG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCCAGTCAGATCAGGCTaGGTTCTAATGTTGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHPVRSG*VLMLTL Trigger: CAAAGTCAACATTAGAACCCAGCCTGATCTGACTGG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGAGGAAGACATTGATGTaGAGGGTCAGCATTTCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLRKTLM*RVSISR Trigger: CCGGGAAATGCTGACCCTCCACATCAATGTCTTCCT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCTGGAAATCTGGCTTTaGAGGAAGACATTGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHLEIWL*RKTLMW Trigger: CCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTAAGCTTTTCTTAACCTaGAAATCTGGCTTTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCKLFLT*KSGFGG Trigger: TCCTCCAAAGCCAGATTTCCAGGTTAAGAAAAGCTT...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCAGCATCTTGGCTTGCTaGAAGCTGAGCAGAGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTSILAC*KLSRAF Trigger: AAAAGCTCTGCTCAGCTTCCAGCAAGCCAAGATGCT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGTGATCACAGACACCTaGCTATGGCTTACAGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLVITDT*LWLTAE Trigger: CTCTGCTGTAAGCCATAGCCAGGTGTCTGTGATCAC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGGAGGGAGCAATACCTaGAATCGTTCAGTTACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLGGSNT*NRSVTR Trigger: CCTGGTAACTGAACGATTCCAGGTATTGCTCCCTCC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | ATTGCCAAGCAGAAGGAATACCTGATGTTTTATGAGCAGTCACAGTaGTCAAGAAAAAGGTGCAGATGTCTACTGTGCCCACAGCCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IAKQKEYLMFYEQSQ*SRKRCRCLLCPQPV Trigger: AACCGGCTGTGGGCACAGTAGACATCTGCACCTTTTTCTTGACAACTGTGACTGCTCATAAAACATCAGGTATTCCTTCTGCTTGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | AACTCTGTGTCCCTAAGGCAAATGAACAAGGGTTTTTGGCCTCTCTaGTCTGGACTGACTTGGTCTGATTGTCCACAAGACGTAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: NSVSLRQMNKGFWPL*SGLTWSDCPQDVMY Trigger: GTACATTACGTCTTGTGGACAATCAGACCAAGTCAGTCCAGACAAGAGAGGCCAAAAACCCTTGTTCATTTGCCTTAGGGACACAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | ATGGCATCTGACACCAGCCTTTCCAATGCGCCATCTGCCTTTCATTaGCTGCAACAGGGTAAAATCTTGTATACCAAAGCAAACGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: MASDTSLSNAPSAFH*LQQGKILYTKANDS Trigger: GCTATCGTTTGCTTTGGTATACAAGATTTTACCCTGTTGCAGCAAATGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGTCAGATGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATAACCAACTGGAAGGCTaGATCTCTTACCTCAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHNQLEG*ISYLKN Trigger: GTTTTTGAGGTAAGAGATTCAGCCTTCCAGTTGGTT...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTCAACAGTAGCTTATTaGGCATGTTTAGAATTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCSTVAY*ACLELR Trigger: ACGCAATTCTAAACATGCTCAATAAGCTACTGTTGA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAGTCATCAGTGGGCATaGCAAGAGTCACAGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYSHQWA*QESQSW Trigger: CCAGGACTGTGACTCTTGTCATGCCCACTGATGACT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTGTGTGTTCAGCCGGTaGTGGGTCACATCTTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYCVFSR*WVTSWD Trigger: ATCCCAAGATGTGACCCACCACCGGCTGAACACACA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTGCAGCTCTGGAGAGTaGAATTCCTTCTCCTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLCSSGE*NSFSFS Trigger: TGAGAAGGAGAAGGAATTCCACTCTCCAGAGCTGCA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGCTAATAAAGGGCTATaGGTCAGTCTTGAAGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLANKGL*VSLEGA Trigger: GGCTCCTTCAAGACTGACCCATAGCCCTTTATTAGC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | ACTTTATGCATGTGTACACAAACACAGATTATTCATTCAGCAGGCTaGCCAGCCAACTGCTGTTGCTGTTTGGCAACAGAGGAGATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLCMCTQTQIIHSAG*PANCCCCLATEEIE Trigger: CTCAATCTCCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGTTTGTGTACACATGCATAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGGCAACAGAGGAGATTaGGATACTAATCCTGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLGNRGD*DTNPGS Trigger: TGATCCAGGATTAGTATCTCAATCTCCTCTGTTGCC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCAGGGGACAGTTCAGTaGACTATGTACAGAATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTQGTVQ*TMYRIY Trigger: GTAAATTCTGTACATAGTTCACTGAACTGTCCCCTG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGCTATGGGTCAGTCTTaGAGGAGCCAATTAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLAMGQS*RSQLKR Trigger: TCTCTTTAATTGGCTCCTTCAAGACTGACCCATAGC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTCTTCTGCTCCTTGGTaGAGGGGATTATGGCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLSSAPW*RGLWLF Trigger: AAATAGCCATAATCCCCTGCACCAAGGAGCAGAAGA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTCTGCCTCACAGAATTaGCAAGCAGAAGGAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLSASQN*QAEGIP Trigger: AGGTATTCCTTCTGCTTGGCAATTCTGTGAGGCAGA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATAGCAGTTACCGCTGTTaGGAATCTGTGGGGTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HFPGHSFCSLKCRVQRADSSYRC*ESVGLK Trigger: TTTTAACCCCACAGATTCCCAACAGCGGTAACTGCT...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATAAACAAAGCAATTGGTaGAACTCTTACAGAGCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: QELERVWFGPESLIISPHKQSNW*NSYRAR Trigger: ACGAGCTCTGTAAGAGTTCCACCAATTGCTTTGTTT...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAGTTCTGGTTTCTGCTaGTGCTCTGTTCTTTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYSSGFC*CSVLWP Trigger: GGGCCAAAGAACAGAGCACCAGCAGAAACCAGAACT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGAAACTGAACAGTGTCTaGTGGCCACAGGATCTTACT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLKLNSV*WPQDLT Trigger: AGTAAGATCCTGTGGCCACCAGACACTGTTCAGTTT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | TTTAAAGCTTTTCTTAACCTGGAAATCTGGCTTTGGAGGAAGACATaGATGTGGAGGGTCAGCATTTCCCGGGCCATTCATTTTGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FKAFLNLEIWLWRKT*MWRVSISRAIHFVA Trigger: AGCTACAAAATGAATGGCCCGGGAAATGCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAAAAGCTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTGGCTTGCTGGAAGCTaGGCAGAGCTTTTTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYWLAGS*AELFTK Trigger: CTTTGTAAAAAGCTCTGCTCAGCTTCCAGCAAGCCA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCTCTTCCTGGAAATCTaGAACTTGTCAATCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLLFLEI*NLSING Trigger: GCCATTGATTGACAAGTTGCAGATTTCCAGGAAGAG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGTTTTCAGTCTCTTCTaGTCCTTGGTGCAGGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYVFSLF*SLVQGI Trigger: AATCCCCTGCACCAAGGAGCAGAAGAGACTGAAAAC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTTAGACACTGCTCTCTaGAAGGCTAAGAGGTACATA | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLLDTAL*KAKRYI Trigger: TATGTACCTCTTAGCCTTCCAGAGAGCAGTGTCTAA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTTGCAGAAATTACTTTaGTTGTCATGTGCGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLLQKLL*LSCALA Trigger: AGCCAGCGCACATGACAACCAAAGTAATTTCTGCAA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTTACCTGTAGCTGAATaGGTCTCAGTAGATAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLLPVAE*VSVDRP Trigger: AGGTCTATCTACTGAGACCCATTCAGCTACAGGTAA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | TCCAATGCGCCATCTGCCTTTCATTTGCTGCAACAGGGTAAAATCTaGTATACCAAAGCAAACGATAGCATGTTTTCTAGCAAAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SNAPSAFHLLQQGKI*YTKANDSMFSSKAT Trigger: TGTGGCTTTGCTAGAAAACATGCTATCGTTTGCTTTGGTATACAAGATTTTACCCTGTTGCAGCAAATGAAAGGCAGATGGCGCATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCGTTGTTGTTGTTGTTaGAGTAAACATGGTGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: QYLESFSYQVLQTQVASTRCCCC*SKHGVI Trigger: TATCACACCATGTTTACTTCAACAACAACAACAACG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAGCTTTTTACAAAGATaGCCCTTTGACCCCAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYSFLQR*PFDPRM Trigger: CATCCTGGGGTCAAAGGGTCATCTTTGTAAAAAGCT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCATTCAGGAAACTGCTaGTTGAACCACCTTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYHSGNC*LNHLEQ Trigger: TTGCTCAAGGTGGTTCAATCAGCAGTTTCCTGAATG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGTAACTGAGAAAGACTaGCAACAATATCTACCACCT | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLVTEKD*QQYLPP Trigger: AGGTGGTAGATATTGTTGGCAGTCTTTCTCAGTTAC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGATCTTGGATGGTTTGTaGAACCTTGTTGCAGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLILDGL*NLVADV Trigger: TACATCTGCAACAAGGTTGCACAAACCATCCAAGAT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCGTACGGCTTTTTCTTaGCTAAGTTACAGAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYRTAFS*LSYRGW Trigger: CCATCCTCTGTAACTTAGCCAAGAAAAAGCCGTACG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | AAATTCCCTCGTTTGCCTTCTCTATCAGTTCACACCCAGAAACTTTaGTCTACCTTTAAGAGTAAGAACACAGATACCCCTGTATCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KFPRLPSLSVHTQKL*STFKSKNTDTPVSL Trigger: GAGAGATACAGGGGTATCTGTGTTCTTACTCTTAAAGGTAGACAAAAGTTTCTGGGTGTGAACTGATAGAGAAGGCAAACGAGGGAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | ATTCACAAATTCACCGTTTACAGGGAGGTCTGCCTTTTATTTGTATaGATCACCGTCCATAGGCTTCATGGATTTTGTCCACAGATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IHKFTVYREVCLLFV*ITVHRLHGFCPQIA Trigger: AGCTATCTGTGGACAAAATCCATGAAGCCTATGGACGGTGATCAATACAAATAAAAGGCAGACCTCCCTGTAAACGGTGAATTTGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATATGGCTTTATTCTTCTaGGATGCTCAAGTTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HFPGHSFCSLKCRVQRADMALFF*DAQVVF Trigger: GAAAACAACTTGAGCATCTCAGAAGAATAAAGCCAT...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGATTCATTTTGTAGCTTaGAATGCAGAGTTCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLIHFVA*NAEFRE Trigger: CTCTCTGAACTCTGCATTTCAAGCTACAAAATGAAT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAGCAGAAGGAATACCTaGTGTTTTATGAGCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYSRRNT*CFMSSH Trigger: GTGACTGCTCATAAAACATCAGGTATTCCTTCTGCT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTGTAAGTCCAAAGATTaGAGCTGCCGTCTAAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYCKSKD*SCRLSM Trigger: CATACTTAGACGGCAGCTTCAATCTTTGGACTTACA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATACTACTCAGTTCACTTaGCACCATGTGGCTAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYTTQFT*HHVANL Trigger: AAGATTAGCCACATGGTGTCAAGTGAACTGAGTAGT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTTGTCAAGAAAAAGGTaGAGATGTCTACTGTGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYLSRKR*RCLLCP Trigger: TGGGCACAGTAGACATCTGCACCTTTTTCTTGACAA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGATAGGGCATGTTGTTTaGTGTATGTTTAGAGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLIGHVV*CMFREL Trigger: GAGTTCTCTAAACATACAGCAAACAACATGCCCTAT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGGGAAATGTCTGCCATaGGAGATGTCAAAACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYGKCLP*EMSKQT Trigger: TGTTTGTTTTGACATCTCCCATGGCAGACATTTCCC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATATAAGAGAGGAAGTGTaGAGTTTTCAGTCTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYIREEV*SFQSLL Trigger: CAGAAGAGACTGAAAACTGCACACTTCCTCTCTTAT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCAATATGTTCTAGCCTaGAAACTGGCAGAATGGATT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYQYVLA*KLAEWI Trigger: AATCCATTCTGCCAGTTTCCAGGCTAGAACATATTG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGACCATGAGTAGGAATTaGGAAGAATTGTTACAATTC | + |
|
Preference number: 2 (lower is better) Translates to: ANILWDCSLKTAHWSVPLTMSRN*EELLQF Trigger: GAATTGTAACAATTCTTCCCAATTCCTACTCATGGT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGATACTTCTCTAAGATaGGAGATGGAAGATTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYDTSLR*EMEDCD Trigger: GTCACAATCTTCCATCTCCCATCTTAGAGAAGTATC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATATAACATGTAAGTCTTaGCTTCTTCAGGGAAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYITCKS*LLQGNS Trigger: GCTATTTCCCTGAAGAAGGCAAGACTTACATGTTAT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAAAGGCTCAGTGTGTTaGCATTTCAGAGTTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYKGSVC*HFRVSF Trigger: AAAAGAAACTCTGAAATGGCAACACACTGAGCCTTT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATATCTCTGTCTTCAATTaGTTGGAGAGTCTGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYISVFN*LESLNF Trigger: GAAATTCAGACTCTCCAAGCAATTGAAGACAGAGAT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 90 bp | TGGGAACTGACAGTTTTATATACCCTCTTCCTGGAAATCTGCAACTaGTCAATCAATGGCTTTATTCTTCTGAGATGCTCAAGTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: WELTVLYTLFLEICN*SINGFILLRCSSCF Trigger: AAAACAACTTGAGCATCTCAGAAGAATAAAGCCATTGATTGACAAGTTGCAGATTTCCAGGAAGAGGGTATATAAAACTGTCAGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGATAAATTCACGAATTaGAAAAGGTATGGGAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYDKFTN*KRYGSQ Trigger: TTGACTCCCATACCTTTTGCAATTCGTGAATTTATC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCAACTTGTCAATCAATaGCTTTATTCTTCTGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYQLVNQ*LYSSEM Trigger: CATCTCAGAAGAATAAAGCCATTGATTGACAAGTTG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCTGAAGCAGGAACTGTaGAAAATGATCATATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ENNCEANHHLINFLLWLYLKQEL*KMIICF Trigger: AAAACATATGATCATTTTCCACAGTTCCTGCTTCAG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AGCGAGATGGGGCAGTGCCATAATGACAGTGGTGAATaGGTGGAGACACTTCCGGTCCACGCCTCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SEMGQCHNDSGE*VETLPVHASGA Trigger: AGCCCCTGAGGCGTGGACCGGAAGTGTCTCCACTCATTCACCACTGTCATTATGGCACTGCCCCATCTCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | GAAGGTGTGTGTTTCTTCCTGCGTGGATGTGGCACCTaGTTTGGAAGCCACAGGCCATCGAACGCAGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGVCFFLRGCGT*FGSHRPSNAGC Trigger: GCACCCTGCGTTCGATGGCCTGTGGCTTCCAAAGCAGGTGCCACATCCACGCAGGAAGAAACACACACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | AGATGGGGCAGTGCCATAATGACAGTGGTGAATGAGTaGAGACACTTCCGGTCCACGCCTCAGGGGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RWGSAIMTVVNE*RHFRSTPQGLV Trigger: CACCAGCCCCTGAGGCGTGGACCGGAAGTGTCTCCACTCATTCACCACTGTCATTATGGCACTGCCCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | GCTCAAGGAGCAGATTGTCCCAGTTCTGGTTTCTGCTaGTGCTCTGTTCTTTGGCCCCGCAGGTTGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AQGADCPSSGFC*CSVLWPRRLAA Trigger: GGCTGCCAACCTGCGGGGCCAAAGAACAGAGCACCAGCAGAAACCAGAACTGGGACAATCTGCTCCTTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | AGTCATCCTGTCATCCTGATTAGCCCTGCAGTTCCATaGCTGGATCGTGCCAACATGGCCTCCATCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SHPVILISPAVP*LDRANMASIHG Trigger: GCCGTGGATGGAGGCCATGTTGGCACGATCCAGGCATGGAACTGCAGGGCTAATCAGGATGACAGGATGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | TTAGCCCTGCAGTTCCATGCCTGGATCGTGCCAACATaGCCTCCATCCACGGCTGGTCAATTTGCGCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LALQFHAWIVPT*PPSTAGQFALS Trigger: TGAGAGCGCAAATTGACCAGCCGTGGATGGAGGCCATGTTGGCACGATCCAGGCATGGAACTGCAGGGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | ACTGCTCAAGGAGCAGATTGTCCCAGTTCTGGTTTCTaGTGGTGCTCTGTTCTTTGGCCCCGCAGGTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TAQGADCPSSGF*WCSVLWPRRLA Trigger: TGCCAACCTGCGGGGCCAAAGAACAGAGCACCAGCAGAAACCAGAACTGGGACAATCTGCTCCTTGAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | GCCAGAGCATCAAATGAGGCAGTCATCCTGTCATCCTaGTTAGCCCTGCAGTTCCATGCCTGGATCGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARASNEAVILSS*LALQFHAWIVP Trigger: TGGCACGATCCAGGCATGGAACTGCAGGGCTAATCAGGATGACAGGATGACTGCCTCATTTGATGCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | AGTAACAGAAGGTGTGTGTTTCTTCCTGCGTGGATGTaGCACCTGCTTTGGAAGCCACAGGCCATCGAACGC | + |
|
Preference number: 3 (lower is better) Translates to: SNRRCVFLPAWM*HLLWKPQAIER Trigger: GCGTTCGATGGCCTGTGGCTTCCAAAGCAGGTGCCACATCCACGCAGGAAGAAACACACACCTTCTGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | CTGCGAAGTAACAGAAGGTGTGTGTTTCTTCCTGCGTaGATGTGGCACCTGCTTTGGAAGCCACAGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LRSNRRCVFLPA*MWHLLWKPQAI Trigger: GATGGCCTGTGGCTTCCAAAGCAGGTGCCACATCCACGCAGGAAGAAACACACACCTTCTGTTACTTCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATaGGGCAGTCATCCTGTCATCCTGATTAGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PILFSEEGQSIK*GSHPVILISPA Trigger: TGCAGGGCTAATCAGGATGACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CTATCCCATCACAGTGGACAGAGTTGTTTCCAGAAGTaGTGGGTGCCAGCAGGGGAGGGAATGAAGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSHHSGQSCFQK*WVPAGEGMKMG Trigger: ACCCATCTTCATTCCCTCCCCTGCTGGCACCCATCACTTCTGGAAACAACTCTGTCCACTGTGATGGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CTTTGGAAGCCACAGGCCATCGAACGCAGGGTGCTGTaGATTAAAGTAGCAGACGCTGGTTTGGTGGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LWKPQAIERRVL*IKVADAGLVGL Trigger: CAAACCCACCAAACCAGCGTCTGCTACTTTAATTCACAGCACCCTGCGTTCGATGGCCTGTGGCTTCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | GGGAGTGAGGAGTGGGGAGAGCGGATAGAAATAAACTaGACAGTGTCTGGTGGCCACAGGATCTTACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSEEWGERIEIN*TVSGGHRILLL Trigger: CAAGAGTAAGATCCTGTGGCCACCAGACACTGTTCAGTTTATTTCTATCCGCTCTCCCCACTCCTCACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TTCTGTTCATTCAGGAAACTGCTGATTGAACCACCTTaGGCAAGTGGTTGCACGCTCCTTTCACCCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FCSFRKLLIEPP*ASGCTLLSPLP Trigger: AGGGAGGGGTGAAAGGAGCGTGCAACCACTTGCTCAAGGTGGTTCAATCAGCAGTTTCCTGAATGAACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AGCAGCTTTGTAGTTCCAAACAGAGCTGATGGCATCTaGCACCAGCCTTTCCAATGCGCCATCTGCCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSFVVPNRADGI*HQPFQCAICLS Trigger: TGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGTCAGATGCCATCAGCTCTGTTTGGAACTACAAAGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | GTGGGGAGAGCGGATAGAAATAAACTGAACAGTGTCTaGTGGCCACAGGATCTTACTCTTGGCTGTAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VGRADRNKLNSV*WPQDLTLGCKS Trigger: GCTCTTACAGCCAAGAGTAAGATCCTGTGGCCACCAGACACTGTTCAGTTTATTTCTATCCGCTCTCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCTCTGCCTCACAGAATaGCCAAGCAGAAGGAATACC | + |
|
Preference number: 3 (lower is better) Translates to: QELERVWFGPESLIISPHLCLTE*PSRRNT Trigger: GGTATTCCTTCTGCTTGGCAATTCTGTGAGGCAGAG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | ACAGTGCTTCAGTTTTCCAAACATCCACCCAGAAGTTaGGGACCACCATACCACAGGGGACAGTTCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TVLQFSKHPPRS*GPPYHRGQFSE Trigger: TTCACTGAACTGTCCCCTGTGGTATGGTGGTCCTCAACTTCTGGGTGGATGTTTGGAAAACTGAAGCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | CAGGGGCTGGTGGGCGTTGCTAAAGGCTCAGTGTGTTaGCATTTCAGAGTTTCTTTTCTTTCTGTGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGLVGVAKGSVC*HFRVSFLSVIW Trigger: CCAAATCACAGAAAGAAAAGAAACTCTGAAATGGCAACACACTGAGCCTTTAGCAACGCCCACCAGCCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTCTCAACAGTAGCTTATaGAGCATGTTTAGAATTGCG | + |
|
Preference number: 3 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCLNSSL*SMFRIA Trigger: CGCAATTCTAAACATGCTCAATAAGCTACTGTTGAG...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCTTCCCTGTCAGTGTTaGGCTTGGGAAGGGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYLPCQC*AWEGSR Trigger: TCTGCTCCCTTCCCAAGCCAAACACTGACAGGGAAG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TTCTTAACCTGGAAATCTGGCTTTGGAGGAAGACATTaGTGTGGAGGGTCAGCATTTCCCGGGCCATTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FLTWKSGFGGRH*CGGSAFPGPFI Trigger: AATGAATGGCCCGGGAAATGCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TCCATCAACACATGGGGAGGTTGGGAGAATCATCTTTaGAGGTTGCCTAAGGCTGGGAGCAGAGCTAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SINTWGGWENHL*RLPKAGSRANF Trigger: AAAATTAGCTCTGCTCCCAGCCTTAGGCAACCTTCAAAGATGATTCTCCCAACCTCCCCATGTGTTGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AAAGAGAGCAATGAAAAGCTTAGTGCACAGGAGAGATaGAGCCTGCTTAGGCACAAGATGTGGCTCACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KESNEKLSAQER*SLLRHKMWLTR Trigger: CCTTGTGAGCCACATCTTGTGCCTAAGCAGGCTTCATCTCTCCTGTGCACTAAGCTTTTCATTGCTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | ATTCCATTTCAGCAGCTTTGTAGTTCCAAACAGAGCTaGTGGCATCTGACACCAGCCTTTCCAATGCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: IPFQQLCSSKQS*WHLTPAFPMRH Trigger: ATGGCGCATTGGAAAGGCTGGTGTCAGATGCCATCAGCTCTGTTTGGAACTACAAAGCTGCTGAAATGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | CAGCATTTCCCGGGCCATTCATTTTGTAGCTTGAAATaGAGAGTTCAGAGAGCAGATGCAAAAAGTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QHFPGHSFCSLK*RVQRADAKSAH Trigger: GTGGGCACTTTTTGCATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TGTGTACACAAACACAGATTATTCATTCAGCAGGCTTaGCAGCCAACTGCTGTTGCTGTTTGGCAACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CVHKHRLFIQQA*QPTAVAVWQQR Trigger: CCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGTTTGTGTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TTAAGGATACTTGCAGAAATTACTTTGGTTGTCATGTaGGCTGGCTGGAGAACAACTGCGAGGCCAATCACC | + |
|
Preference number: 3 (lower is better) Translates to: LRILAEITLVVM*AGWRTTARPIT Trigger: GGTGATTGGCCTCGCAGTTGTTCTCCAGCCAGCGCACATGACAACCAAAGTAATTTCTGCAAGTATCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | CACACGCTGGAGACTTTTGAAAGGACTCTGAAAACTTaGAGGGAGCAATACCTGGAATCGTTCAGTTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: HTLETFERTLKT*REQYLESFSYQ Trigger: CTGGTAACTGAACGATTCCAGGTATTGCTCCCTCCAAGTTTTCAGAGTCCTTTCAAAAGTCTCCAGCGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | CTTAATTTGTCACTCCAATGGGTGTCCCAGGCACACTaGGATGTACGGTCTTCTAAGAATGATGGTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNLSLQWVSQAH*DVRSSKNDGVN Trigger: GTTCACACCATCATTCTTAGAAGACCGTACATCCCAGTGTGCCTGGGACACCCATTGGAGTGACAAATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTCTGGAAATCTGCAACTaGTCAATCAATGGCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCLEICN*SINGFI Trigger: AATAAAGCCATTGATTGACAAGTTGCAGATTTCCAG...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCCTGGAAATCTGGCTTaGGAGGAAGACATTGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ANILWDCSLKTAHWSVPLPGNLA*EEDIDV Trigger: CACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCTGTCAGTGTTTGGCTaGGGAAGGGAGCAGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYLSVFG*GREQRR Trigger: TCTTCTCTGCTCCCTTCCCAAGCCAAACACTGACAG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGAGTCTGAATTTCTGTaGGTGCTGCCTGCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYESEFL*VLPASL Trigger: CAGAGAGGCAGGCAGCACCAACAGAAATTCAGACTC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCAACACATGGGGAGGTaGGGAGAATCATCTTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ANILWDCSLKTAHWSVPLQHMGR*GESSLK Trigger: CTTCAAAGATGATTCTCCCAACCTCCCCATGTGTTG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | GGCTTGCTGGAAGCTGAGCAGAGCTTTTTACAAAGATaGCCCTTTGACCCCAGGATGATGTTAGTTCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: GLLEAEQSFLQR*PFDPRMMLVQL Trigger: TAGTTGAACTAACATCATCCTGGGGTCAAAGGGTCATCTTTGTAAAAAGCTCTGCTCAGCTTCCAGCAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TGGTGGCCACAGGATCTTACTCTTGGCTGTAAGAGCTaGCTTCATCCAAGTTTTTGCACTTCCTTGAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: WWPQDLTLGCKS*LHPSFCTSLNY Trigger: GTAGTTCAAGGAAGTGCAAAAACTTGGATGAAGTCAGCTCTTACAGCCAAGAGTAAGATCCTGTGGCCACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | ACACAGATTATTCATTCAGCAGGCTTGCCAGCCAACTaGTGTTGCTGTTTGGCAACAGAGGAGATTGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: TQIIHSAGLPAN*CCCLATEEIEI Trigger: TATCTCAATCTCCTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | CTGTTTTTAGGAAAACATGTAACAGCACAGCAGGAATaGCATCCATCCCAAGGGTCACAAGAAGGTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LFLGKHVTAQQE*HPSQGSQEGCS Trigger: GGAACAACCTTCTTGTGACCCTTGGGATGGATGGCATTCCTGCTGTGCTGTTACATGTTTTCCTAAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | TTGTCCACAAGACGTAATGTACAGGTAGTGCAGCTCTaGAGAGTGGAATTCCTTCTCCTTCTCAATTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSTRRNVQVVQL*RVEFLLLLNWF Trigger: GAACCAATTGAGAAGGAGAAGGAATTCCACTCTCCAGAGCTGCACTACCTGTACATTACGTCTTGTGGACAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | AACTCTGTGTCCCTAAGGCAAATGAACAAGGGTTTTTaGCCTCTCTTGTCTGGACTGACTTGGTCTGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSVSLRQMNKGF*PLLSGLTWSDC Trigger: ACAATCAGACCAAGTCAGTCCAGACAAGAGAGGCCAAAAACCCTTGTTCATTTGCCTTAGGGACACAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AAACTGACACACAAGATCGAAAACCAACTGGAAGGCTaGATCTCTTACCTCAAAAACCACAGCAGTTACCGC | + |
|
Preference number: 3 (lower is better) Translates to: KLTHKIENQLEG*ISYLKNHSSYR Trigger: GCGGTAACTGCTGTGGTTTTTGAGGTAAGAGATTCAGCCTTCCAGTTGGTTTTCGATCTTGTGTGTCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TGTTTTTCTCTTCTGTTCATTCAGGAAACTGCTGATTaGACCACCTTGAGCAAGTGGTTGCACGCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CFSLLFIQETAD*TTLSKWLHAPF Trigger: GAAAGGAGCGTGCAACCACTTGCTCAAGGTGGTTCAATCAGCAGTTTCCTGAATGAACAGAAGAGAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TTGCATAATGGTGGCTGTGATCCACATACCATTCCATaGCCAGTGGGCAATTCAGGCCTAATCATTTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LHNGGCDPHTIP*PVGNSGLIILH Trigger: ATGTAAAATGATTAGGCCTGAATTGCCCACTGGGCATGGAATGGTATGTGGATCACAGCCACCATTATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | CCCTCTAGCACTAAGAAACTAATCTCTGTCTTCAATTaGTTGGAGAGTCTGAATTTCTGTTGGTGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSSTKKLISVFN*LESLNFCWCCL Trigger: CAGGCAGCACCAACAGAAATTCAGACTCTCCAAGCAATTGAAGACAGAGATTAGTTTCTTAGTGCTAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TACTTTGGTTGTCATGTGCGCTGGCTGGAGAACAACTaGGAGGCCAATCACCACTTAATTAACTTTTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YFGCHVRWLENN*EANHHLINFLL Trigger: TAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTCCAGCCAGCGCACATGACAACCAAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | AATGAAGATGGGTACTCAGATGGATATTTTGAGTGCTaGTGGCTTGCAACTTATCATCGAGGTGGAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NEDGYSDGYFEC*WLATYHRGGIL Trigger: CAGGATTCCACCTCGATGATAAGTTGCAAGCCAGCAGCACTCAAAATATCCATCTGAGTACCCATCTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | ACACCAGCCTTTCCAATGCGCCATCTGCCTTTCATTTaGTGCAACAGGGTAAAATCTTGTATACCAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TPAFPMRHLPFI*CNRVKSCIPKQ Trigger: TTGCTTTGGTATACAAGATTTTACCCTGTTGCAGCAAATGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCGGAAAATACCTTTTGTaGTTGCCGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QYLESFSYQVLQTQVASTGKYLL*LPLLLL Trigger: CAACAACAACAACGGCAACAACAAAAGGTATTTTCC...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCACAGGAAAATACCTTTaGTTGTTGCCGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QYLESFSYQVLQTQVASTTGKYL*LLPLLL Trigger: CAACAACAACGGCAACAACAAAAGGTATTTTCCTGT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCACAATAGGGTGAGTTaGGGGAAAAGTGGGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYHNRVS*GKSGKK Trigger: CTTCTTCCCACTTTTCCCCAAACTCACCCTATTGTG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCTCGGCTATTCAGTTCTaGATGATACAAATAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: QYLESFSYQVLQTQVASTSAIQF*MIQIAT Trigger: TGTGGCTATTTGTATCATCAAGAACTGAATAGCCGA...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AGTCTGGGAGGTGTTCAGAAGGTAGGACAAAGATCATaGCTCACAAGCAAGACATCTTTCCTTGATGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: SLGGVQKVGQRS*LTSKTSFLDAI Trigger: TATTGCATCAAGGAAAGATGTCTTGCTTGTGAGTCATGATCTTTGTCCTACCTTCTGAACACCTCCCAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AATAATACTGCGCCTGTCCATCCTTTCGCTTTGGACTaGGACTGGATTAATGAAGGAATCTGTAACTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NNTAPVHPFALD*DWINEGICNSV Trigger: CACAGAGTTACAGATTCCTTCATTAATCCAGTCTCAGTCCAAAGCGAAAGGATGGACAGGCGCAGTATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CAAGGGCATTCAGAGGTGGTTAAAAAGTCTTGCCTCTaGAGACCTTTTAAAGGTACCATGAGTAGGAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGHSEVVKKSCL*RPFKGTMSRNW Trigger: CCAATTCCTACTCATGGTACCTTTAAAAGGTCTTCAGAGGCAAGACTTTTTAACCACCTCTGAATGCCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CTTAAAGGCATGAGACTAAGGCTATTATTAGATTTGTaGGGCTGCATGAACAAGGTCTATGGTGAACCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKGMRLRLLLDL*GCMNKVYGEPA Trigger: TGCGGGTTCACCATAGACCTTGTTCATGCAGCCTCACAAATCTAATAATAGCCTTAGTCTCATGCCTTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | ATGTTTTATGAGCAGTCACAGTTGTCAAGAAAAAGGTaGAGATGTCTACTGTGCCCACAGCCGGTTAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MFYEQSQLSRKR*RCLLCPQPVKF Trigger: AAACTTAACCGGCTGTGGGCACAGTAGACATCTGCACCTTTTTCTTGACAACTGTGACTGCTCATAAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | GGACTTGCCCTGTTTCTGAATATCTTGGATGGTTTGTaGAACCTTGTTGCAGATGTACTGAGTGCTGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: GLALFLNILDGL*NLVADVLSADN Trigger: ATTATCAGCACTCAGTACATCTGCAACAAGGTTGCACAAACCATCCAAGATATTCAGAAACAGGGCAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | TGGCTATACTTTAAAGCTTTTCTTAACCTGGAAATCTaGCTTTGGAGGAAGACATTGATGTGGAGGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WLYFKAFLNLEI*LWRKTLMWRVS Trigger: GCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAAAAGCTTTAAAGTATAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCATTCATTTTGTAGCTaGAAATGCAGAGTTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QYLESFSYQVLQTQVASTHSFCS*KCRVQR Trigger: TCTCTGAACTCTGCATTTCAAGCTACAAAATGAATG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCTCCTTTTCATGTAACTaGGCAGATTGTAATCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: QYLESFSYQVLQTQVASTSFSCN*ADCNQT Trigger: GGTTTGATTACAATCTGCCAAGTTACATGAAAAGGA...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGATGACAGAGTTATTATaGGATAGCTACCCAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ANILWDCSLKTAHWSVPLMTELL*DSYPKP Trigger: TGGCTTTGGGTAGCTATCCAATAATAACTCTGTCAT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CAGAATTGCCAAGCAGAAGGAATACCTGATGTTTTATaGGCAGTCACAGTTGTCAAGAAAAAGGTGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QNCQAEGIPDVL*AVTVVKKKVQM Trigger: CATCTGCACCTTTTTCTTGACAACTGTGACTGCTCATAAAACATCAGGTATTCCTTCTGCTTGGCAATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CTCTGCCTCACAGAATTGCCAAGCAGAAGGAATACCTaGTGTTTTATGAGCAGTCACAGTTGTCAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCLTELPSRRNT*CFMSSHSCQEK Trigger: TTTTTCTTGACAACTGTGACTGCTCATAAAACATCAGGTATTCCTTCTGCTTGGCAATTCTGTGAGGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AAAATTGGAGACCATATCACATGGGTGAATGATGTGTaGGAGTCCCTTACAGATACTTCTCTAAGATGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KIGDHITWVNDV*ESLTDTSLRWE Trigger: CTCCCATCTTAGAGAAGTATCTGTAAGGGACTCTCACACATCATTCACCCATGTGATATGGTCTCCAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TCCCAAGATGTAAAATTGGAGACCATATCACATGGGTaGATGATGTGTGAGAGTCCCTTACAGATACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQDVKLETISHG*MMCESPLQILL Trigger: GAGAAGTATCTGTAAGGGACTCTCACACATCATTCACCCATGTGATATGGTCTCCAATTTTACATCTTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | GTAAGAGCTGACTTCATCCAAGTTTTTGCACTTCCTTaGACTACTCCACCAGCCTGTATTATTGATGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRADFIQVFALP*TTPPACIIDVR Trigger: TCTGACATCAATAATACAGGCTGGTGGAGTAGTTCAAGGAAGTGCAAAAACTTGGATGAAGTCAGCTCTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | CTATGGTCTCTGAGATCAATGCTTTGTAGTCAGATTTaGATAATGGTGGCTGTGATCCACATACCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LWSLRSMLCSQI*IMVAVIHIPFH Trigger: ATGGAATGGTATGTGGATCACAGCCACCATTATGCAAATCTGACTACAAAGCATTGATCTCAGAGACCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TTCCTCATTCACAAATTCACCGTTTACAGGGAGGTCTaGCTTTTATTTGTATTGATCACCGTCCATAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLIHKFTVYREV*LLFVLITVHRL Trigger: AAGCCTATGGACGGTGATCAATACAAATAAAAGGCAGACCTCCCTGTAAACGGTGAATTTGTGAATGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | AAAGCAATTGGTGGAACTCTTACAGAGCTCGTACCTTaGACCACAGTTGACAGGAAAATACCTTTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KAIGGTLTELVP*TTVDRKIPFVV Trigger: AACAACAAAAGGTATTTTCCTGTCAACTGTGGTCCAAGGTACGAGCTCTGTAAGAGTTCCACCAATTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | TACTTTAAAGCTTTTCTTAACCTGGAAATCTGGCTTTaGAGGAAGACATTGATGTGGAGGGTCAGCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YFKAFLNLEIWL*RKTLMWRVSIS Trigger: GGAAATGCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAAAAGCTTTAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | AATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTaGAGTGTTCCATTGACAATCCAATGCTGTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NILWDCSLKTAH*SVPLTIQCCFN Trigger: GTTGAAACAGCATTGGATTGTCAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | ACACTACCTAGTAAATCCGTGGTGTCTGGTTGTCTTTaGGGGGTTACATTGGCAAAGTCTATTCTTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TLPSKSVVSGCL*GVTLAKSILFL Trigger: AAGAAAAAGAATAGACTTTGCCAATGTAACCCCCCAAAGACAACCAGACACCACGGATTTACTAGGTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTACCTTGGACCACAGTaGACAGGAAAATACCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYYLGPQ*TGKYLL Trigger: CAAAAGGTATTTTCCTGTCAACTGTGGTCCAAGGTA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGAATCTCTGTCTTCAATaGCTTGGAGAGTCTGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: ANILWDCSLKTAHWSVPLNLCLQ*LGESEF Trigger: AAATTCAGACTCTCCAAGCAATTGAAGACAGAGATT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCCACTGTTGTACAACTaGAGTGATAAGAGATTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYPLLYN*SDKRFW Trigger: CCAGAATCTCTTATCACTCAAGTTGTACAACAGTGG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCCTTCTCCTTCTCAATaGGTTCAGGAGTTTCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: ENNCEANHHLINFLLWLYPSPSQ*VQEFQF Trigger: AAATTGAAACTCCTGAACCAATTGAGAAGGAGAAGG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | ATACAATTCGACTTAAGATTTGGCAGTGCAGATAACTaGCCAGGCACCTTTTACATAACATGTAAGTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: IQFDLRFGSADN*PGTFYITCKSC Trigger: GCAAGACTTACATGTTATGTAAAAGGTGCCTGGGCAGTTATCTGCACTGCCAAATCTTAAGTCGAATTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | ACAGCTTTTAAGAACTCAGAGTCTCTTTCATCTAGATaGGTAGTTGCATCTGGCGTGAAAGCTCAAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: TAFKNSESLSSR*VVASGVKAQIH Trigger: ATGTATTTGAGCTTTCACGCCAGATGCAACTACCCATCTAGATGAAAGAGACTCTGAGTTCTTAAAAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TCCTGCAAAAACGGGAAGAACTCAACAGTAGCTTATTaGGCATGTTTAGAATTGCGTTGCTTTACTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SCKNGKNSTVAY*ACLELRCFTES Trigger: ACTTTCAGTAAAGCAACGCAATTCTAAACATGCTCAATAAGCTACTGTTGAGTTCTTCCCGTTTTTGCAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | ATTGCAAAAGGTATGGGAGTCAATCAAAAATGGTTCTaGGTCTCTTGCTGTGAGTCTCTTAATAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IAKGMGVNQKWF*VSCCESLNKPK Trigger: CTTTGGCTTATTAAGAGACTCACAGCAAGAGACTCAGAACCATTTTTGATTGACTCCCATACCTTTTGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | AGGTTTGGAAGAAATATGACTACTACTCAGTTCACTTaGCACCATGTGGCTAATCTTAAAGGCATGAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: RFGRNMTTTQFT*HHVANLKGMRL Trigger: TAGTCTCATGCCTTTAAGATTAGCCACATGGTGTCAAGTGAACTGAGTAGTAGTCATATTTCTTCCAAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | CAGAGAATCAGACAAGAGTCTTGGGTCTTATATTCTTaGAATAAGCACGCTAGACTAGGCACTTCTAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QRIRQESWVLYS*NKHARLGTSNL Trigger: AAGATTAGAAGTGCCTAGTCTAGCGTGCTTATTTCAAGAATATAAGACCCAAGACTCTTGTCTGATTCTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | GAGAATCATAAACACTCAGTAAAAGTTAAGGATACTTaGAGAAATTACTTTGGTTGTCATGTGCGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ENHKHSVKVKDT*RNYFGCHVRWL Trigger: CAGCCAGCGCACATGACAACCAAAGTAATTTCTGCAAGTATCCTTAACTTTTACTGAGTGTTTATGATTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CCA 72 bp | TCCTCTGAGAGTCATCTTTTGTTACCTGTAGCTGAATaGGTCTCAGTAGATAGACCTACATTAGTAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: SSESHLLLPVAE*VSVDRPTLVNT Trigger: AGTATTTACTAATGTAGGTCTATCTACTGAGACCCATTCAGCTACAGGTAACAAAAGATGACTCTCAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | TGGTATAGTGGGAGAGTATTTTCCCTTAGTCTAATATaGCAGAGTTATTATTGGATAGCTACCCAAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WYSGRVFSLSLI*QSYYWIATQSH Trigger: ATGGCTTTGGGTAGCTATCCAATAATAACTCTGTCATATTAGACTAAGGGAAAATACTCTCCCACTATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR GCA 72 bp | TGTCTTTCATCTTATCTCCTGGCTCTATTCACCACATaGTGTTACTCTTTCAATATTATAGGGCATGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLSSYLLALFTT*CYSFNIIGHVV Trigger: AACAACATGCCCTATAATATTGAAAGAGTAACAGCATGTGGTGAATAGAGCCAGGAGATAAGATGAAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR TCA 72 bp | GAGTTAAATGAAGAAATACAATGTAAGTCCAAAGATTaGAGCTGCCGTCTAAGTATGAGCAAGATAGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: ELNEEIQCKSKD*SCRLSMSKIAY Trigger: ATATGCTATCTTGCTCATACTTAGACGGCAGCTTCAATCTTTGGACTTACATTGTATTTCTTCATTTAACTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTGCGGATGCGCCCCTTaGCCGGTACCCCGTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCCGCAP*PVPRAC Trigger: ACAGGCACGGGGTACCGGGCAAGGGGCGCATCCGCA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCAGGCGCGCCTGCGGATaGGCCCCTTGCCCGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTRRACG*APCPVP Trigger: GGGTACCGGGCAAGGGGCGCATCCGCAGGCGCGCCT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TTGTCCCAGTTCTGGTTTCTGCTGGTGCTCTGTTCTTaGGCCCCGCAGGTTGGCAGCCTTCTAGGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQFWFLLVLCS*APQVGSLLGSC Trigger: GCAGCTCCCTAGAAGGCTGCCAACCTGCGGGGCCAAAGAACAGAGCACCAGCAGAAACCAGAACTGGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCGAAGCCCTCGCGGCTaGTCAGTGGCTTGCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QELERVWFGPESLIISPHRSPRG*SVACGT Trigger: AGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | GGAAACACACAGACTATCCCATCACAGTGGACAGAGTaGTTTCCAGAAGTGATGGGTGCCAGCAGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNTQTIPSQWTE*FPEVMGASRGG Trigger: CCCTCCCCTGCTGGCACCCATCACTTCTGGAAACAACTCTGTCCACTGTGATGGGATAGTCTGTGTGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATCTCGCGGCTGCTCAGTaGCTTGCGGTACTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QELERVWFGPESLIISPHLAAAQ*LAVLDA Trigger: AGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAG...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTGATATGCCCCTGTTGTaGACTCCACCTTCTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCDMPLL*TPPSWT Trigger: TGTCCAAGAAGGTGGAGTTCACAACAGGGGCATATC...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTGTCGTACGAGTACATaGTGGCCTTGGGGTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCCRTST*WPWGHL Trigger: TAAGTGACCCCAAGGCCACCATGTACTCGTACGACA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCCGAGACCATGTCTATaGTGGCGACATCGATCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTPRPCL*WRHRSA Trigger: TGCGGATCGATGTCGCCAGCATAGACATGGTCTCGG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATAGACCATGTCTATGCTaGCGACATCGATCCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QELERVWFGPESLIISPHRPCLC*RHRSAS Trigger: GGATGCGGATCGATGTCGCCAGCATAGACATGGTCT...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATAGTGGCTTGCGGTACTaGATGCTGGCGCTGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HFPGHSFCSLKCRVQRADSGLRY*MLALSY Trigger: GTACGACAGCGCCAGCATCCAGTACCGCAAGCCACT...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | CTCTGTCTTCAATTGCTTGGAGAGTCTGAATTTCTGTaGGTGCTGCCTGCCTCTCTGGGATTGCTAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQLLGESEFL*VLPASLGLLAC Trigger: GCATGCTAGCAATCCCAGAGAGGCAGGCAGCACCAACAGAAATTCAGACTCTCCAAGCAATTGAAGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTGAAGCTCAATTTTATTaGCCCCAGTTACTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCEAQFY*PQLLLP Trigger: AGGGAGCAGTAACTGGGGTCAATAAAATTGAGCTTC...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATTGCGGTACTGGATGCTaGCGCTGTCGTACGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HFPGHSFCSLKCRVQRADCGTGC*RCRTST Trigger: TGTACTCGTACGACAGCGCCAGCATCCAGTACCGCA...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | AACTGGCAGAATGGATTAGTTCCAACAAGGTGTGTTTaGTGTGTTCAGCCGGTGGTGGGTCACATCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NWQNGLVPTRCV*CVQPVVGHILG Trigger: TCCCAAGATGTGACCCACCACCGGCTGAACACACAAAACACACCTTGTTGGAACTAATCCATTCTGCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | CATCATGGGGAAGCAGAAAAGAAAGCAACCACGTCATaGCTTGAAGAGGAGCAGGAGTCCATCAACACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HHGEAEKKATTS*LEEEQESINTW Trigger: CCATGTGTTGATGGACTCCTGCTCCTCTTCAAGCAATGACGTGGTTGCTTTCTTTTCTGCTTCCCCATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTGTCTCTTTCACGTATaGCATGTTGCTGGGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCCLFHV*HVAGFI Trigger: AATGAACCCAGCAACATGTCATACGTGAAAGAGACA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATGAATGTCATATCCTTTaGGCAGTCGGTCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QELERVWFGPESLIISPHECHIL*AVGPLS Trigger: AGACAGTGGACCGACTGCTCAAAGGATATGACATTC...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGAAAGTCTCCCTGAGGTaGGTGCTGATGGTGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ANILWDCSLKTAHWSVPLKVSLR*VLMVVM Trigger: CATGACCACCATCAGCACTCACCTCAGGGAGACTTT...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTTCATTGGAGCTGTGTaGACAACAAACCATAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCFIGAV*TTNHSN Trigger: GTTGCTATGGTTTGTTGTGCACACAGCTCCAATGAA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGCTTGCGGTACTGGATaGTGGCGCTGTCGTACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYACGTG*WRCRTS Trigger: ACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATATCTTCACTTTGAGCTaGGAGGCGCGCCTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYIFTLS*EARLRM Trigger: CATCCGCAGGCGCGCCTCGCAGCTCAAAGTGAAGAT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCGTACGAGTACATGGTaGCCTTGGGGTCACTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ANILWDCSLKTAHWSVPLRTSTW*PWGHLH Trigger: GTGTAAGTGACCCCAAGGCCACCATGTACTCGTACG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTGACCCCATGCACAAATaGTTTCTTGTCATTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCDPMHK*FLVIEK Trigger: TTTCTCAATGACAAGAAATCATTTGTGCATGGGGTC...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCAGATGTCAATCGCTTTaGCGTAAGGGATCTTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTRCQSL*RKGSSA Trigger: TGCCGAAGATCCCTTACGTCAAAGCGATTGACATCT...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATATTGACCCCAGTTACTaGTCCCTCTCCTCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPGHSFCSLKCRVQRADIDPSY*SLSSIP Trigger: TGGAATGGAGGAGAGGGAGCAGTAACTGGGGTCAAT...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATGAGAAAGTAGGTGTCTaGTACCCAGAGTTGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFPGHSFCSLKCRVQRADEKVGV*YPELVS Trigger: GCTGACCAACTCTGGGTACCAGACACCTACTTTCTC...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCGGGACCACTTGTCTATaGAGTTCACGTCAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTGTTCL*SSRQSS Trigger: ACTTGACTGACGTGAACTCCATAGACAAGTGGTCCC...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TTTCTTAACCTGGAAATCTGGCTTTGGAGGAAGACATaGATGTGGAGGGTCAGCATTTCCCGGGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLNLEIWLWRKT*MWRVSISRAIH Trigger: ATGAATGGCCCGGGAAATGCTGACCCTCCACATCAATGTCTTCCTCCAAAGCCAGATTTCCAGGTTAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCTGGGATTCCAGAATATaGAAGCCTCTTGTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTWDSRI*KPLVLP Trigger: TGGAAGGACAAGAGGCTTTCATATTCTGGAATCCCA...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCCGTGGGCATCAACTTaGACTTTGTTCATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANILWDCSLKTAHWSVPLPWAST*TLFISS Trigger: ACTGGAGATGAACAAAGTCCAAGTTGATGCCCACGG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | GTGGAACTCTTACAGAGCTCGTACCTTGGACCACAGTaGACAGGAAAATACCTTTTGTTGTTGCCGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VELLQSSYLGPQ*TGKYLLLLPLL Trigger: CAACAACGGCAACAACAAAAGGTATTTTCCTGTCAACTGTGGTCCAAGGTACGAGCTCTGTAAGAGTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | GAGGGTCAGCATTTCCCGGGCCATTCATTTTGTAGCTaGAAATGCAGAGTTCAGAGAGCAGATGCAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGQHFPGHSFCS*KCRVQRADAKS Trigger: ACTTTTTGCATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATGCTGACCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TCTATTGTGTCCAGGGATTGTCCATGGCAAAGCATCTaGGCTTGCTGGAAGCTGAGCAGAGCTTTTTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIVSRDCPWQSI*ACWKLSRAFYK Trigger: TTTGTAAAAAGCTCTGCTCAGCTTCCAGCAAGCCAAGATGCTTTGCCATGGACAATCCCTGGACACAATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | ATGTGTACACAAACACAGATTATTCATTCAGCAGGCTaGCCAGCCAACTGCTGTTGCTGTTTGGCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCTQTQIIHSAG*PANCCCCLATE Trigger: CTCTGTTGCCAAACAGCAACAGCAGTTGGCTGGCAAGCCTGCTGAATGAATAATCTGTGTTTGTGTACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | GACACCAGCCTTTCCAATGCGCCATCTGCCTTTCATTaGCTGCAACAGGGTAAAATCTTGTATACCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DTSLSNAPSAFH*LQQGKILYTKA Trigger: TGCTTTGGTATACAAGATTTTACCCTGTTGCAGCAAATGAAAGGCAGATGGCGCATTGGAAAGGCTGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | GACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATaGACAATCCAATGCTGTTTCAACTTCCAATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLKTAHWSVP*TIQCCFNFQCP Trigger: GGGGCATTGGAAGTTGAAACAGCATTGGATTGTCAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATATGATTTCTTGTCATTaGGAAAGTAGGTGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QELERVWFGPESLIISPHMISCH*ESRCLV Trigger: TACCAGACACCTACTTTCTCAATGACAAGAAATCAT...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTTGTCCTTCCAAGACTaGTGGAAATACATGGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANILWDCSLKTAHWSVPLLSFQD*WKYMVS Trigger: ACTCACCATGTATTTCCAGCAGTCTTGGAAGGACAA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATAAGATCCATCATGCATaGTGCAGTGGTTGTGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYKIHHA*CSGCDP Trigger: CGGATCACAACCACTGCAGCATGCATGATGGATCTT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATCGTATGACATGTTGCTaGGTTCATTGGAGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYRMTCC*VHWSCV Trigger: CACACAGCTCCAATGAACCCAGCAACATGTCATACG...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | CAGAAGGAATACCTGATGTTTTATGAGCAGTCACAGTaGTCAAGAAAAAGGTGCAGATGTCTACTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKEYLMFYEQSQ*SRKRCRCLLCP Trigger: TGGGCACAGTAGACATCTGCACCTTTTTCTTGACAACTGTGACTGCTCATAAAACATCAGGTATTCCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TCTAGCACTAAGAAACTAATCTCTGTCTTCAATTGCTaGGAGAGTCTGAATTTCTGTTGGTGCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTKKLISVFNC*ESLNFCWCCLP Trigger: AGGCAGGCAGCACCAACAGAAATTCAGACTCTCCAAGCAATTGAAGACAGAGATTAGTTTCTTAGTGCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCGCTGGAAATACATGGTaGGTGTATAATCCATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTAGNTW*VYNPYS Trigger: TGAATATGGATTATACACTCACCATGTATTTCCAGC...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR TCA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCCTTGTAGTCAACAATTaGAAATTGGGGAAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYLESFSYQVLQTQVASTLVVNN*KLGKLN Trigger: ATTGAGCTTCCCCAATTTTCAATTGTTGACTACAAG...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTCACGTATGACATGTTaGTGGGTTCATTGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYSRMTC*WVHWSC Trigger: ACAGCTCCAATGAACCCAGCAACATGTCATACGTGA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCGGGCCATTCATTTTGTAGCTTGAAATGCAGAGTTCAGAGAGCAGATTTCACTGTGACCCCATaGACAAATGATTTCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPGHSFCSLKCRVQRADFTVTP*TNDFLS Trigger: TGACAAGAAATCATTTGTGCATGGGGTCACAGTGAA...ATCTGCTCTCTGAACTCTGCATTTCAAGCTACAAAATGAATGGCCCGGGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTTTCAATCTCCAGGGTaGAGTTTTGCTCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYFQSPG*SFAHPE Trigger: CTCTGGATGAGCAAAACTGCACCCTGGAGATTGAAA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | CGTTTGCCTTCTCTATCAGTTCACACCCAGAAACTTTaGTCTACCTTTAAGAGTAAGAACACAGATACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLPSLSVHTQKL*STFKSKNTDTP Trigger: AGGGGTATCTGTGTTCTTACTCTTAAAGGTAGACAAAAGTTTCTGGGTGTGAACTGATAGAGAAGGCAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TGGGTAGTTGCATCTGGCGTGAAAGCTCAAATACATTaGCTCATGTCATTTAGAGACATAGAGAGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVVASGVKAQIH*LMSFRDIERCE Trigger: CTCACATCTCTCTATGTCTCTAAATGACATGAGCAAATGTATTTGAGCTTTCACGCCAGATGCAACTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TTGCACTTCCTTGAACTACTCCACCAGCCTGTATTATaGATGTCAGAGGGATTCAATATAGATCATGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHFLELLHQPVL*MSEGFNIDHVG Trigger: TCCCACATGATCTATATTGAATCCCTCTGACATCAATAATACAGGCTGGTGGAGTAGTTCAAGGAAGTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | ACAAGAACCGGTGTAATGCCAAGCAGGATAACGAGTTaGCTAAATTACATTTGGCAAGAGGGTAGATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRTGVMPSRITS*LNYIWQEGRLQ Trigger: TTGCAATCTACCCTCTTGCCAAATGTAATTTAGCAAACTCGTTATCCTGCTTGGCATTACACCGGTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATTCCTTCCAAGACTGCTaGAAATACATGGTGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ENNCEANHHLINFLLWLYSFQDC*KYMVSV Trigger: TACACTCACCATGTATTTCCAGCAGTCTTGGAAGGA...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | TGTTTTGATTGCGTAAGATCCTCTGAGAGTCATCTTTaGTTACCTGTAGCTGAATGGGTCTCAGTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFDCVRSSESHL*LPVAEWVSVDR Trigger: TCTATCTACTGAGACCCATTCAGCTACAGGTAACAAAAGATGACTCTCAGAGGATCTTACGCAATCAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| 3UTR CAA 72 bp | ACAGTTTTATATACCCTCTTCCTGGAAATCTGCAACTaGTCAATCAATGGCTTTATTCTTCTGAGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLYTLFLEICN*SINGFILLRCS Trigger: TGAGCATCTCAGAAGAATAAAGCCATTGATTGACAAGTTGCAGATTTCCAGGAAGAGGGTATATAAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS GCA 90 bp | AGCTGCGAGGCGCGCCTGCGGATGCGCCCCTTGCCCGGTACCCCGTaGCTGTCCAGCCCACGCCCGAAGCCCTCGCGGCTGCTCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCEARLRMRPLPGTP*LSSPRPKPSRLLSG Trigger: GCCACTGAGCAGCCGCGAGGGCTTCGGGCGTGGGCTGGACAGGCACGGGGTACCGGGCAAGGGGCGCATCCGCAGGCGCGCCTCGCAGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CCA 90 bp | AGCCCACGCCCGAAGCCCTCGCGGCTGCTCAGTGGCTTGCGGTACTaGATGCTGGCGCTGTCGTACGAGTACATGGTGGCCTTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRPKPSRLLSGLRY*MLALSYEYMVALGS Trigger: TGACCCCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGCGTGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS GCA 90 bp | CACGCCCGAAGCCCTCGCGGCTGCTCAGTGGCTTGCGGTACTGGATaGTGGCGCTGTCGTACGAGTACATGGTGGCCTTGGGGTCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: HARSPRGCSVACGTG*WRCRTSTWWPWGHL Trigger: TAAGTGACCCCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CCA 90 bp | GCCCGAAGCCCTCGCGGCTGCTCAGTGGCTTGCGGTACTGGATGCTaGCGCTGTCGTACGAGTACATGGTGGCCTTGGGGTCACTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: ARSPRGCSVACGTGC*RCRTSTWWPWGHLH Trigger: GTGTAAGTGACCCCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTCTGCGGATGCGCCCCTaGCCCGGTACCCCGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCLRMRP*PGTPCL Trigger: CAGGCACGGGGTACCGGGCAAGGGGCGCATCCGCAG...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTCGGCTGCTCAGTGGCTaGCGGTACTGGATGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCRLLSG*RYWMLA Trigger: CGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCG...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTTCGGGGATCTTCACTTaGAGCTGCGAGGCGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCSGIFT*SCEARL Trigger: CAGGCGCGCCTCGCAGCTCAAAGTGAAGATCCCCGA...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATTCTCTTCTCAGAGGAGGGCCAGAGCATCAAATGAGGCAGTCATCCTGTCTCCAGGGTGCAGTTTaGCTCATCCAGAGGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: TDSLLRGGPEHQMRQSSCLQGAV*LIQRVS Trigger: AGATACCCTCTGGATGAGCAAAACTGCACCCTGGAG...ACAGGATGACTGCCTCATTTGATGCTCTGGCCCTCCTCTGAGAAGAGAATCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCGTGCTGAGGAGAATATaGCCGTGGGCATCAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QYLESFSYQVLQTQVASTVLRRI*PWASTW Trigger: CCAAGTTGATGCCCACGGCAATATTCTCCTCAGCAC...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CCA 90 bp | GGGCATCAACTTGGACTTTGTTCATCTCCAGTCTGTTCTTTTCATTaGCACTCTGGTCTTGTTTGCTCGCTCCCTTTTTCTGAGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHQLGLCSSPVCSFH*HSGLVCSLPFSEGL Trigger: AAGGCCCTCAGAAAAAGGGAGCGAGCAAACAAGACCAGAGTGCCAATGAAAAGAACAGACTGGAGATGAACAAAGTCCAAGTTGATGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATTTCACGTATGACATGTaGCTGGGTTCATTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QELERVWFGPESLIISPHFTYDM*LGSLEL Trigger: CAGCTCCAATGAACCCAGCAACATGTCATACGTGAA...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCTGGAGAGAGTCTGGTTTGGGCCCGAATCACTAATCATTTCACCTCATAACATTCGGGACCACTaGTCTATGGAGTTCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QELERVWFGPESLIISPHNIRDH*SMEFTS Trigger: TGACGTGAACTCCATAGACAAGTGGTCCCGAATGTT...ATGAGGTGAAATGATTAGTGATTCGGGCCCAAACCAGACTCTCTCCAGCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGCGAATGTCATATCCTTaGAGCAGTCGGTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ANILWDCSLKTAHWSVPLRMSYP*SSRSTV Trigger: GACAGTGGACCGACTGCTCAAAGGATATGACATTCG...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS TCA 90 bp | AATGTCATATCCTTTGAGCAGTCGGTCCACTGTCTCTTTCACGTATaGCATGTTGCTGGGTTCATTGGAGCTGTGTGCACAACAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: NVISFEQSVHCLFHV*HVAGFIGAVCTTNH Trigger: ATGGTTTGTTGTGCACACAGCTCCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACCGACTGCTCAAAGGATATGACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGGAATATGAAAGCCTCTaGTCCTTCCAAGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANILWDCSLKTAHWSVPLEYESL*SFQDCW Trigger: CCAGCAGTCTTGGAAGGACAAGAGGCTTTCATATTC...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | CAATACCTGGAATCGTTCAGTTACCAGGTTCTTCAGACTCAAGTAGCTTCCACCGCATCAACTTGGACTTaGTTCATCTCCAGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QYLESFSYQVLQTQVASTASTWT*FISSLF Trigger: GAACAGACTGGAGATGAACAAAGTCCAAGTTGATGC...GGTGGAAGCTACTTGAGTCTGAAGAACCTGGTAACTGAACGATTCCAGGTATTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATGGAAGCTCAATTTTATaGACCCCAGTTACTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ENNCEANHHLINFLLWLYGSSIL*TPVTAP Trigger: GGGAGCAGTAACTGGGGTCAATAAAATTGAGCTTCC...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACAACTGCGAGGCCAATCACCACTTAATTAACTTTTTGCTATGGCTGTATATTGGCACTCTGGTCTaGTTTGCTCGCTCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ENNCEANHHLINFLLWLYIGTLV*FARSLF Trigger: AAAAAGGGAGCGAGCAAACAAGACCAGAGTGCCAAT...ATACAGCCATAGCAAAAAGTTAATTAAGTGGTGATTGGCCTCGCAGTTGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS-3UTR CAA 90 bp | GCAAATATCCTCTGGGACTGTTCTCTTAAGACTGCACATTGGAGTGTTCCATTGTCTTGTAGTCAACAATaGAAAATTGGGGAAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ANILWDCSLKTAHWSVPLSCSQQ*KIGEAQ Trigger: TTGAGCTTCCCCAATTTTCAATTGTTGACTACAAGA...CAATGGAACACTCCAATGTGCAGTCTTAAGAGAACAGTCCCAGAGGATATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CAA 72 bp | ACTTTGAGCTGCGAGGCGCGCCTGCGGATGCGCCCCTaGCCCGGTACCCCGTGCCTGTCCAGCCCACGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TLSCEARLRMRP*PGTPCLSSPRP Trigger: CGGGCGTGGGCTGGACAGGCACGGGGTACCGGGCAAGGGGCGCATCCGCAGGCGCGCCTCGCAGCTCAAAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CAA 90 bp | GGGATCTTCACTTTGAGCTGCGAGGCGCGCCTGCGGATGCGCCCCTaGCCCGGTACCCCGTGCCTGTCCAGCCCACGCCCGAAGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GIFTLSCEARLRMRP*PGTPCLSSPRPKPS Trigger: CGAGGGCTTCGGGCGTGGGCTGGACAGGCACGGGGTACCGGGCAAGGGGCGCATCCGCAGGCGCGCCTCGCAGCTCAAAGTGAAGATCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CCA 72 bp | GTCCAGCCCACGCCCGAAGCCCTCGCGGCTGCTCAGTaGCTTGCGGTACTGGATGCTGGCGCTGTCGTACGA | + |
|
Preference number: 6 (lower is better) Translates to: VQPTPEALAAAQ*LAVLDAGAVVR Trigger: TCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGCGTGGGCTGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS GCA 72 bp | GCCCACGCCCGAAGCCCTCGCGGCTGCTCAGTGGCTTaGGGTACTGGATGCTGGCGCTGTCGTACGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: AHARSPRGCSVA*GTGCWRCRTST Trigger: TGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGCGTGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CAA 72 bp | AGCCCACGCCCGAAGCCCTCGCGGCTGCTCAGTGGCTaGCGGTACTGGATGCTGGCGCTGTCGTACGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPRPKPSRLLSG*RYWMLALSYEY Trigger: GTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGGGCGTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
||
| CDS CCA 72 bp | CCGAAGCCCTCGCGGCTGCTCAGTGGCTTGCGGTACTaGATGCTGGCGCTGTCGTACGAGTACATGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PKPSRLLSGLRY*MLALSYEYMVA Trigger: GGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCTTCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS GCA 72 bp | AGCCCTCGCGGCTGCTCAGTGGCTTGCGGTACTGGATaGTGGCGCTGTCGTACGAGTACATGGTGGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPRGCSVACGTG*WRCRTSTWWPW Trigger: CCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CCA 72 bp | CCTCGCGGCTGCTCAGTGGCTTGCGGTACTGGATGCTaGCGCTGTCGTACGAGTACATGGTGGCCTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PRGCSVACGTGC*RCRTSTWWPWG Trigger: ACCCCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAAGCCACTGAGCAGCCGCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CAA 90 bp | TTGCGGTACTGGATGCTGGCGCTGTCGTACGAGTACATGGTGGCCTaGGGGTCACTTACACCTGTGAGCACCTCGGAGCCACTGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LRYWMLALSYEYMVA*GSLTPVSTSEPLVS Trigger: CGAGACCAGTGGCTCCGAGGTGCTCACAGGTGTAAGTGACCCCAAGGCCACCATGTACTCGTACGACAGCGCCAGCATCCAGTACCGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CCA 72 bp | TATAATCCATATTCACTTCCGAGACCATGTCTATGCTaGCGACATCGATCCGCATCCCGACGTCCACCGGGG | + |
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Preference number: 6 (lower is better) Translates to: YNPYSLPRPCLC*RHRSASRRPPG Trigger: CCCCGGTGGACGTCGGGATGCGGATCGATGTCGCCAGCATAGACATGGTCTCGGAAGTGAATATGGATTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031122.9 ENSMUST00000199967.5 |
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| CDS GCA 72 bp | GTGTATAATCCATATTCACTTCCGAGACCATGTCTATaGTGGCGACATCGATCCGCATCCCGACGTCCACCG | + |
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Preference number: 6 (lower is better) Translates to: VYNPYSLPRPCL*WRHRSASRRPP Trigger: CGGTGGACGTCGGGATGCGGATCGATGTCGCCAGCATAGACATGGTCTCGGAAGTGAATATGGATTATACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031122.9 ENSMUST00000199967.5 |
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| CDS CAA 90 bp | GAGCCACTGGTCTCGTTCCTGATTTCCAGGGTGCTGAGGAGAATATaGCCGTGGGCATCAACTTGGACTTTGTTCATCTCCAGTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: EPLVSFLISRVLRRI*PWASTWTLFISSLF Trigger: GAACAGACTGGAGATGAACAAAGTCCAAGTTGATGCCCACGGCAATATTCTCCTCAGCACCCTGGAAATCAGGAACGAGACCAGTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS TCA 72 bp | TCCTTTGAGCAGTCGGTCCACTGTCTCTTTCACGTATaGCATGTTGCTGGGTTCATTGGAGCTGTGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SFEQSVHCLFHV*HVAGFIGAVCT Trigger: TGTGCACACAGCTCCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACCGACTGCTCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS GCA 72 bp | GCAGTCGGTCCACTGTCTCTTTCACGTATGACATGTTaGTGGGTTCATTGGAGCTGTGTGCACAACAAACCA | + |
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Preference number: 6 (lower is better) Translates to: AVGPLSLSRMTC*WVHWSCVHNKP Trigger: TGGTTTGTTGTGCACACAGCTCCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACCGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CAA 72 bp | AGCAGTCGGTCCACTGTCTCTTTCACGTATGACATGTaGCTGGGTTCATTGGAGCTGTGTGCACAACAAACC | + |
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Preference number: 6 (lower is better) Translates to: SSRSTVSFTYDM*LGSLELCAQQT Trigger: GGTTTGTTGTGCACACAGCTCCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACCGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CCA 72 bp | TTCCTGATTTCCAGGGTGCTGAGGAGAATATTGCCGTaGGCATCAACTTGGACTTTGTTCATCTCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: FLISRVLRRILP*ASTWTLFISSL Trigger: CAGACTGGAGATGAACAAAGTCCAAGTTGATGCCCACGGCAATATTCTCCTCAGCACCCTGGAAATCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CAA 90 bp | TATCCTTTGAGCAGTCGGTCCACTGTCTCTTTCACGTATGACATGTaGCTGGGTTCATTGGAGCTGTGTGCACAACAAACCATAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: YPLSSRSTVSFTYDM*LGSLELCAQQTIAT Trigger: GGTTGCTATGGTTTGTTGTGCACACAGCTCCAATGAACCCAGCAACATGTCATACGTGAAAGAGACAGTGGACCGACTGCTCAAAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS GCA 72 bp | CATCCGTGGTATAGCCATAACTTTCAATCTCCAGGGTaGAGTTTTGCTCATCCAGAGGGTATCTTCGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HPWYSHNFQSPG*SFAHPEGIFED Trigger: ATCTTCGAAGATACCCTCTGGATGAGCAAAACTGCACCCTGGAGATTGAAAGTTATGGCTATACCACGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031122.9 ENSMUST00000199967.5 |
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| CDS CAA 72 bp | CTGAGGAGAATATTGCCGTGGGCATCAACTTGGACTTaGTTCATCTCCAGTCTGTTCTTTTCATTGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: LRRILPWASTWT*FISSLFFSLAL Trigger: GAGTGCCAATGAAAAGAACAGACTGGAGATGAACAAAGTCCAAGTTGATGCCCACGGCAATATTCTCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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| CDS CAA 72 bp | ACTTGGACTTTGTTCATCTCCAGTCTGTTCTTTTCATaGGCACTCTGGTCTTGTTTGCTCGCTCCCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TWTLFISSLFFS*ALWSCLLAPFF Trigger: GAAAAAGGGAGCGAGCAAACAAGACCAGAGTGCCAATGAAAAGAACAGACTGGAGATGAACAAAGTCCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031122.9 |
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