Pregenerated sensors for GABRA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020428Ensembl transcript IDs: ENSMUST00000020703.13, ENSMUST00000109286.4, ENSMUST00000155218.9
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGGCTGCAGTTTGTGCCTaGCTTTCAGCCTTCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMAAVCA*LSAFCD Trigger: GTCACAGAAGGCTGAAAGGCAGGCACAAACTGCAGC...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAAGATGGGCGTTCTACTaGGGGCTTTGCTGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIRWAFY*GLCWPQ Trigger: CTGAGGCCAGCAAAGCCCTCAGTAGAACGCCCATCT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGGCTCCCAAACTTGAGTaGACAAGCGTGTCCATCCAT | + |
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Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMAPKLE*TSVSIH Trigger: ATGGATGGACACGCTTGTCCACTCAAGTTTGGGAGC...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCGCTGGCCTCAGAAGATaGAACGATGGGCAAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSAGLRR*NDGQSQ Trigger: CTGACTTTGCCCATCGTTCCATCTTCTGAGGCCAGC...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATGCTGGTGCCCCCAGTaGCTGGTAAGAGCAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTCWCPQ*LVRAMG Trigger: CCCCATTGCTCTTACCAGCCACTGGGGGCACCAGCA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCCATAGCTCCCAAACTTaGGTGGACAAGCGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSHSSQT*VDKRVH Trigger: ATGGACACGCTTGTCCACTCAAGTTTGGGAGCTATG...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGCCTTTCAGCCTTCTGTaGCTGGAGATTGGTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMPFSLL*LEIGEV Trigger: TACTTCACCAATCTCCAGTCACAGAAGGCTGAAAGG...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTAGATGGGCGTTCTACTaGGGGCTTTGCTGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIRWAFY*GLCWPQ Trigger: CTGAGGCCAGCAAAGCCCTCAGTAGAACGCCCATCT...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATACGTGGCTGCAGTTTGTaGCTGCCTTTCAGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIRGCSL*LPFSLL Trigger: CAGAAGGCTGAAAGGCAGGCACAAACTGCAGCCACG...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCGATCTATTTTGCTGGTaGCCCCAGTGGCTGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSDLFCW*PQWLVR Trigger: TCTTACCAGCCACTGGGGGCACCAGCAAAATAGATC...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCACTGATCTATTTTGCTaGTGCCCCCAGTGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSTDLFC*CPQWLV Trigger: TACCAGCCACTGGGGGCACCAGCAAAATAGATCAGT...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTGGATTCAGACGCTTTTaGCTTTGCCACAGGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIGFRRF*LCHRGR Trigger: ACGCCCCCTGTGGCAAAGTCAAAAGCGTCTGAATCC...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACAGGATTCAGACGCTTTTaGCTTTGCCACAGGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTGFRRF*LCHRGR Trigger: ACGCCCCCTGTGGCAAAGTCAAAAGCGTCTGAATCC...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAGCTGCAGTTTGTGCCTaGCTTTCAGCCTTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIAAVCA*LSAFCD Trigger: GTCACAGAAGGCTGAAAGGCAGGCACAAACTGCAGC...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAAGTCATCTCCACATCTaGCACAGGTCCAAAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKISHLHI*HRSKAG Trigger: ACCAGCTTTGGACCTGTGTCAGATGTGGAGATGACT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020703.13 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGCAGCTGCGAATTCAATaGGAGCAGAAAAGACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMQLRIQ*EQKRQK Trigger: CTTTTGTCTTTTCTGCTCTCATTGAATTCGCAGCTG...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCGCAAAGTCAGAGAGCTaGTTCTCTTCTTCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSAKSES*FSSSDG Trigger: ACCATCTGAAGAAGAGAATCAGCTCTCTGACTTTGC...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCTCCAGTACACAAGGTTaGATCCTGCAAAAGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSSSTQG*ILQKLL Trigger: CAGTAGCTTTTGCAGGATTCAACCTTGTGTACTGGA...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGTACTTGGAGTCAGAATaGACAACAATCTCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMYLESE*TTISAC Trigger: GCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTA...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGACACAGGTCCAAAGCTaGTCACATAGATGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMTQVQS*SHRCLF Trigger: AAACAGACATCTATGTGACCAGCTTTGGACCTGTGT...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTGCTGGCCTCAGAAGATaGAACGATGGGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIAGLRR*NDGQSQ Trigger: CTGACTTTGCCCATCGTTCCATCTTCTGAGGCCAGC...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| 3UTR CAA 72 bp | AGAATATACAGTCATAGTATAGTCCACCAAGTGACCTaGCTAGAACCTCCTGGTGTTAGCAAGCATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RIYSHSIVHQVT*LEPPGVSKHLL Trigger: AAGAAGATGCTTGCTAACACCAGGAGGTTCTAGCAAGGTCACTTGGTGGACTATACTATGACTGTATATTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGGAGTCCAGATCTTACTaGCCATCAAGTTATTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMESRSY*PSSYLS Trigger: GCTTAAATAACTTGATGGTCAGTAAGATCTGGACTC...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGATCCAGAAAGACACTTaGGAAAGAATGACTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMIQKDT*ERMTVM Trigger: CATGACAGTCATTCTTTCTCAAGTGTCTTTCTGGAT...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCAGTTCTTGCTGGGACTaGCTCCTTATTAATCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSSSCWD*LLINPE Trigger: TTCTGGATTAATAAGGAGTCAGTCCCAGCAAGAACT...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGTGGTTAAAACAGTGGTaGTTCCAAAGACAGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMWLKQW*FQRQFL Trigger: CAAGAACTGTCTTTGGAATCACCACTGTTTTAACCA...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCAGAATTCGAGAATACTaGTCTATTTTGCTGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSRIREY*SILLVP Trigger: GGGCACCAGCAAAATAGATCAGTATTCTCGAATTCT...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGAGGATTGTTCCATTCTaGATTAATCGGAAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMRIVPF*INRKSL Trigger: CAAGCTCTTCCGATTAATGCAGAATGGAACAATCCT...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCGAAGTAGTTGACAGCTaGGAATTCAATGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSEVVDS*EFNESR Trigger: TCTGCTCTCATTGAATTCGCAGCTGTCAACTACTTC...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTGATCTATTTTGCTGGTaGCCCCAGTGGCTGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIDLFCW*PQWLVR Trigger: TCTTACCAGCCACTGGGGGCACCAGCAAAATAGATC...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATTGCATAGGACACTTTaGGTAGAGAGTGCCGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTLHRTL*VESAEH Trigger: GTGCTCGGCACTCTCTACCCAAAGTGTCCTATGCAA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTTTGCATAGGACACTTTaGGTAGAGAGTGCCGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENILHRTL*VESAEH Trigger: GTGCTCGGCACTCTCTACCCAAAGTGTCCTATGCAA...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGTCTTCAGATGGTACTTaGAGTCAGAATGCACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMSSDGT*SQNAQQ Trigger: TTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGA...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTACTGATCTATTTTGCTaGTGCCCCCAGTGGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENITDLFC*CPQWLV Trigger: TACCAGCCACTGGGGGCACCAGCAAAATAGATCAGT...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGGGAAATAGACTGTCATaGTTACATATTCACCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: KQSNATESSCKIVKATSMGNRLS*LHIHQC Trigger: ACACTGGTGAATATGTAATCATGACAGTCTATTTCC...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTCCTTTCAGCCTTCTGTaGCTGGAGATTGGTGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIPFSLL*LEIGEV Trigger: TACTTCACCAATCTCCAGTCACAGAAGGCTGAAAGG...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAGCAAAGTCAGAGAGCTaGTTCTCTTCTTCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIAKSES*FSSSDG Trigger: ACCATCTGAAGAAGAGAATCAGCTCTCTGACTTTGC...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATTCTCTTCTTCAGATaGTACTTGGAGTCAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSILFFR*YLESEC Trigger: GCATTCTGACTCCAAGTACCATCTGAAGAAGAGAAT...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACACCTTCATCTTCAAGTTaGGCTTGGGCATTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTPSSSS*AWAFSS Trigger: GCTAGAAAATGCCCAAGCTCAACTTGAAGATGAAGG...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATACATGTTGTGAGCAATTaGCTTTTTCCCATTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIHVVSN*LFPIPE Trigger: TTCCGGAATGGGAAAAAGTCAATTGCTCACAACATG...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAAGAATTCGAGAATACTaGTCTATTTTGCTGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIRIREY*SILLVP Trigger: GGGCACCAGCAAAATAGATCAGTATTCTCGAATTCT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATCCAGTACACAAGGTTaGATCCTGCAAAAGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTSSTQG*ILQKLL Trigger: CAGTAGCTTTTGCAGGATTCAACCTTGTGTACTGGA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCTCACTAGAAACTGTTTaGCCAATCAAATCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKQSNATESSCKIVKATSSLETV*PIKSYW Trigger: CCAGTATGATTTGATTGGGCAAACAGTTTCTAGTGA...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATACTTGGAGTCAGAATaGACAACAATCTCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIYLESE*TTISAC Trigger: GCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTA...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAACACAGGTCCAAAGCTaGTCACATAGATGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKITQVQS*SHRCLF Trigger: AAACAGACATCTATGTGACCAGCTTTGGACCTGTGT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAATCCAGAAAGACACTTaGGAAAGAATGACTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIIQKDT*ERMTVM Trigger: CATGACAGTCATTCTTTCTCAAGTGTCTTTCTGGAT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACAAGTTCTTGCTGGGACTaGCTCCTTATTAATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTSSCWD*LLINPE Trigger: TTCTGGATTAATAAGGAGTCAGTCCCAGCAAGAACT...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTCAGCTGCGAATTCAATaGGAGCAGAAAAGACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIQLRIQ*EQKRQK Trigger: CTTTTGTCTTTTCTGCTCTCATTGAATTCGCAGCTG...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAAGGATTGTTCCATTCTaGATTAATCGGAAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIRIVPF*INRKSL Trigger: CAAGCTCTTCCGATTAATGCAGAATGGAACAATCCT...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATCATCAGTCCAAGTCTaGCGGAAGAAAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTSSVQV*RKKTSI Trigger: AATGGATGTTTTCTTCCGCCAGACTTGGACTGATGA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACAGAGTCCAGATCTTACTaGCCATCAAGTTATTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTESRSY*PSSYLS Trigger: GCTTAAATAACTTGATGGTCAGTAAGATCTGGACTC...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAGGAAATAGACTGTCATaGTTACATATTCACCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKIGNRLS*LHIHQC Trigger: ACACTGGTGAATATGTAATCATGACAGTCTATTTCC...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATGTATATCTGGATCATaGAATAGCCCATCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKICISGS*NSPSSF Trigger: AAAGGAAGATGGGCTATTTCATGATCCAGATATACA...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATGGTTAAAACAGTGGTaGTTCCAAAGACAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTWLKQW*FQRQFL Trigger: CAAGAACTGTCTTTGGAATCACCACTGTTTTAACCA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR GCA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATCACTAGAAACTGTTTaGCCAATCAAATCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGSVCLNLSAMWKISLETV*PIKSYW Trigger: CCAGTATGATTTGATTGGGCAAACAGTTTCTAGTGA...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACATCTTCAGATGGTACTTaGAGTCAGAATGCACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVCLNLSAMWKILFTVTSSDGT*SQNAQQ Trigger: TTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGA...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCTCTTCTTCAGATaGTACTTGGAGTCAGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFRRVSMSEFICYVENIILFFR*YLESEC Trigger: GCATTCTGACTCCAAGTACCATCTGAAGAAGAGAAT...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS GCA 90 bp | TTCTTCAGATGGTACTTGGAGTCAGAATGCACAACAATCTCTGCTTaGAGGGATTCAGACGCTTTTGACTTTGCCACAGGGGGCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FFRWYLESECTTISA*RDSDAFDFATGGVA Trigger: AGCCACGCCCCCTGTGGCAAAGTCAAAAGCGTCTGAATCCCTGCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS TCA 90 bp | CTTTGCTGGCCTCAGAAGATGGAACGATGGGCAAAGTCAGAGAGCTaGTTCTCTTCTTCAGATGGTACTTGGAGTCAGAATGCACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LCWPQKMERWAKSES*FSSSDGTWSQNAQQ Trigger: TTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAAGAGAATCAGCTCTCTGACTTTGCCCATCGTTCCATCTTCTGAGGCCAGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS CCA 90 bp | GATGGAACGATGGGCAAAGTCAGAGAGCTGATTCTCTTCTTCAGATaGTACTTGGAGTCAGAATGCACAACAATCTCTGCTTGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGTMGKVRELILFFR*YLESECTTISACRD Trigger: ATCCCTGCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAAGAGAATCAGCTCTCTGACTTTGCCCATCGTTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAGGGCGTGGCTGCAGTTaGTGCCTGCCTTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQALEGSVCLNLSAMWKIGRGCS*CLPFSL Trigger: AAGGCTGAAAGGCAGGCACAAACTGCAGCCACGCCC...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACAGGGCGTGGCTGCAGTTaGTGCCTGCCTTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVCLNLSAMWKILFTVTGRGCS*CLPFSL Trigger: AAGGCTGAAAGGCAGGCACAAACTGCAGCCACGCCC...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS GCA 90 bp | GTCAGAGAGCTGATTCTCTTCTTCAGATGGTACTTGGAGTCAGAATaGACAACAATCTCTGCTTGCAGGGATTCAGACGCTTTTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRELILFFRWYLESE*TTISACRDSDAFDF Trigger: AAAGTCAAAAGCGTCTGAATCCCTGCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAAGAGAATCAGCTCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS TCA 90 bp | GTAGACGGTTGTCATAGCCTTCCAGCAAGTTGTCAAGAATCCGACTaGCATTTTCAGAGTAGAAGTTGCCTTCATCTTCAAGTTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDGCHSLPASCQESD*HFQSRSCLHLQVEL Trigger: AAGCTCAACTTGAAGATGAAGGCAACTTCTACTCTGAAAATGTCAGTCGGATTCTTGACAACTTGCTGGAAGGCTATGACAACCGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS CCA 90 bp | AAGGTAAACTATCCAGTACACAAGGTTGAATCCTGCAAAAGCTACTaGGAAGAGAATTCGAGAATACTGATCTATTTTGCTGGTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVNYPVHKVESCKSY*EENSRILIYFAGAP Trigger: GGGGGCACCAGCAAAATAGATCAGTATTCTCGAATTCTCTTCCCAGTAGCTTTTGCAGGATTCAACCTTGTGTACTGGATAGTTTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCATGTTCTTCAGATGGTACTaGGAGTCAGAATGCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: KQSNATESSCKIVKATSMFFRWY*ESECTT Trigger: TGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAA...CATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTCCAAAGACAGTTCTaGCTGGGACTGACTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RQALEGSVCLNLSAMWKIFQRQF*LGLTPY Trigger: ATAAGGAGTCAGTCCCAGCAAGAACTGTCTTTGGAA...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | TATAAGCAGTCCAATGCCACTGAAAGTTCTTGTAAAATTGTAAAGGCCACCAGCTCATGGTATAGAGGATaGTTCCATTCTGCATTAATC | + |
|
Preference number: 5 (lower is better) Translates to: YKQSNATESSCKIVKATSSWYRG*FHSALI Trigger: GATTAATGCAGAATGGAACAATCCTCTATACCATGA...GCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGGCATTGGACTGCTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTTTCCAAAGACAGTTCTaGCTGGGACTGACTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ASFRRVSMSEFICYVENIFQRQF*LGLTPY Trigger: ATAAGGAGTCAGTCCCAGCAAGAACTGTCTTTGGAA...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATCCAGTACACAAGGTaGAATCCTGCAAAAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: ASFRRVSMSEFICYVENIIQYTR*NPAKAT Trigger: AGTAGCTTTTGCAGGATTCAACCTTGTGTACTGGAT...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATAGGAAGAAAACATCCATaGTATACTCCATCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RQALEGSVCLNLSAMWKIGRKHP*YTPSPH Trigger: ATGTGGAGATGGAGTATACAATGGATGTTTTCTTCC...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATCATGGTATAGAGGATaGTTCCATTCTGCATTAATC | + |
|
Preference number: 5 (lower is better) Translates to: RQALEGSVCLNLSAMWKISWYRG*FHSALI Trigger: GATTAATGCAGAATGGAACAATCCTCTATACCATGA...TATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTCTCACTAGAAACTGTTaGCCCAATCAAATCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFRRVSMSEFICYVENILTRNC*PNQIIL Trigger: CAGTATGATTTGATTGGGCAAACAGTTTCTAGTGAG...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTATTCACAGTGACAAATCCAGAAAGACACTaGAGAAAGAATGACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSVCLNLSAMWKILFTVTNPERH*RKNDCH Trigger: ATGACAGTCATTCTTTCTCAAGTGTCTTTCTGGATT...TGTCACTGTGAATAATATTTTCCACATAGCAGATAAATTCAGACATACTGACCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTTAGAAGGGTCAGTATGTCTGAATTTATCTGCTATGTGGAAAATATTAATCCAGAAAGACACTaGAGAAAGAATGACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASFRRVSMSEFICYVENINPERH*RKNDCH Trigger: ATGACAGTCATTCTTTCTCAAGTGTCTTTCTGGATT...AATATTTTCCACATAGCAGATAAATTCAGACATACTGACCCTTCTAAAGCTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020703.13 ENSMUST00000155218.9 |
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| CDS GCA 72 bp | GACTTTGCCACAGGGGGCGTGGCTGCAGTTTGTGCCTaGCTTTCAGCCTTCTGTGACTGGAGATTGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DFATGGVAAVCA*LSAFCDWRLVK Trigger: CTTCACCAATCTCCAGTCACAGAAGGCTGAAAGGCAGGCACAAACTGCAGCCACGCCCCCTGTGGCAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS CAA 90 bp | GGAGAGACAGGCGTCGATTTTAAGATGGGCGTTCTACTGAGGGCTTaGCTGGCCTCAGAAGATGGAACGATGGGCAAAGTCAGAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GETGVDFKMGVLLRA*LASEDGTMGKVREL Trigger: CAGCTCTCTGACTTTGCCCATCGTTCCATCTTCTGAGGCCAGCAAAGCCCTCAGTAGAACGCCCATCTTAAAATCGACGCCTGTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS TCA 72 bp | GAGAGACAGGCGTCGATTTTAAGATGGGCGTTCTACTaGGGGCTTTGCTGGCCTCAGAAGATGGAACGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ERQASILRWAFY*GLCWPQKMERW Trigger: CCATCGTTCCATCTTCTGAGGCCAGCAAAGCCCTCAGTAGAACGCCCATCTTAAAATCGACGCCTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS CCA 72 bp | GGGCGTTCTACTGAGGGCTTTGCTGGCCTCAGAAGATaGAACGATGGGCAAAGTCAGAGAGCTGATTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRSTEGFAGLRR*NDGQSQRADSL Trigger: AAGAGAATCAGCTCTCTGACTTTGCCCATCGTTCCATCTTCTGAGGCCAGCAAAGCCCTCAGTAGAACGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS GCA 72 bp | CTACTGGGAAGAGAATTCGAGAATACTGATCTATTTTaGTGGTGCCCCCAGTGGCTGGTAAGAGCAATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGREFENTDLF*WCPQWLVRAMG Trigger: CCCCATTGCTCTTACCAGCCACTGGGGGCACCAGCAAAATAGATCAGTATTCTCGAATTCTCTTCCCAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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| CDS GCA 72 bp | CTGATTCTCTTCTTCAGATGGTACTTGGAGTCAGAATaGACAACAATCTCTGCTTGCAGGGATTCAGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: LILFFRWYLESE*TTISACRDSDA Trigger: AGCGTCTGAATCCCTGCAAGCAGAGATTGTTGTGCATTCTGACTCCAAGTACCATCTGAAGAAGAGAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020703.13 ENSMUST00000109286.4 ENSMUST00000155218.9 |
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