Pregenerated sensors for GABRA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029211Ensembl transcript IDs: ENSMUST00000031121.10, ENSMUST00000197994.2, ENSMUST00000198138.2, ENSMUST00000199357.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCAGGGCGAGTGGAAGCTGACCCCAAAGAAGCTGGCCGCAATGTaGCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: MQGEWKLTPKKLAAM*HEERGMLQMKDLWL Trigger: CAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACATTGCGGCCAGCTTCTTTGGGGTCAGCTTCCACTCGCCCTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | AGAAGCTGGCCGCAATGTGCCATGAGGAGAGGGGGATGCTGCAGATaGAAGACCTCTGGCTGCAGCAGACATAGTCTCAGCTGCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: RSWPQCAMRRGGCCR*KTSGCSRHSLSCIC Trigger: GCAAATGCAGCTGAGACTATGTCTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACATTGCGGCCAGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | TCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTAAGTaGGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SAAFALLNGFGLEAK*ALGVASEDSWTALV Trigger: GACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCTCACTTAGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | TGTGCCAGATCCAGAAGGCGGTGGAGCAGGGGGAGGAGGTGTGGCTaGCACATTCCCAGCAGCCCCTGTTGTATTAACTGTTGTCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: CARSRRRWSRGRRCG*HIPSSPCCINCCLN Trigger: ATTAAGACAACAGTTAATACAACAGGGGCTGCTGGGAATGTGTCAGCCACACCTCCTCCCCCTGCTCCACCGCCTTCTGGATCTGGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | GGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTaGTTTCCCACCTCAGTTCTGCTTTTGACATCCGATTCTGAATGG | + |
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Preference number: 1 (lower is better) Translates to: GVASEDSWTALVLLE*FPTSVLLLTSDSEW Trigger: CCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | CAGCGCTGGTCTTGCTGGAGTGATTTCCCACCTCAGTTCTGCTTTTaGCATCCGATTCTGAATGGACCAAGGCATTTGTTCTTTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: QRWSCWSDFPPQFCF*HPILNGPRHLFFSS Trigger: TGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | GATTTGATAGTCTCGCTTGATACAGTCTGCCCAATGAGGTCATATTaGACTAAGCTAGAAGACTCCTTTGGCACCTCCACTGACTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: DLIVSLDTVCPMRSY*TKLEDSFGTSTDFS Trigger: TGAGAAGTCAGTGGAGGTGCCAAAGGAGTCTTCTAGCTTAGTTCAATATGACCTCATTGGGCAGACTGTATCAAGCGAGACTATCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | GCTGGAGTGATTTCCCACCTCAGTTCTGCTTTTGACATCCGATTCTaGATGGACCAAGGCATTTGTTCTTTTCCTCATGTTCAAATTGGC | + |
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Preference number: 1 (lower is better) Translates to: AGVISHLSSAFDIRF*MDQGICSFPHVQIG Trigger: GCCAATTTGAACATGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGTGGGAAATCACTCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | CAATTATGTGTCAGAAAACACATTTGCCCTGGTCGGCATCTGTATTaGTATAGCAGAGGCTTCACTGTATTGATCAGTCTTTGTTTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: QLCVRKHICPGRHLY*YSRGFTVLISLCFV Trigger: AACAAAACAAAGACTGATCAATACAGTGAAGCCTCTGCTATATCAATACAGATGCCGACCAGGGCAAATGTGTTTTCTGACACATAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR TCA 90 bp | CTCTCAGAAAAACAAATACAAAACGTGCCAGACATACAGATGTTATaGGCACAGAATCTTGCGAGGACATTAGCATTTCAGCAGCTAATA | + |
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Preference number: 1 (lower is better) Translates to: LSEKQIQNVPDIQML*AQNLARTLAFQQLI Trigger: TATTAGCTGCTGAAATGCTAATGTCCTCGCAAGATTCTGTGCTCATAACATCTGTATGTCTGGCACGTTTTGTATTTGTTTTTCTGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR CCA 90 bp | ATTCTGAATGGACCAAGGCATTTGTTCTTTTCCTCATGTTCAAATTaGCATGTGTATTCTGAAGGGATGTTTCTGTGTGTTTCTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ILNGPRHLFFSSCSN*HVYSEGMFLCVSPS Trigger: TGAAGGAGAAACACACAGAAACATCCCTTCAGAATACACATGCCAATTTGAACATGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 90 bp | GAAAAGTCAATACCTGAGAACCCAGATACATTGCATAACACTCACTaGCATTCCATCCAAGGCTACAATACATTTATTCTCTTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: EKSIPENPDTLHNTH*HSIQGYNTFILFFL Trigger: GAGAAAGAAGAGAATAAATGTATTGTAGCCTTGGATGGAATGTCAGTGAGTGTTATGCAATGTATCTGGGTTCTCAGGTATTGACTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR GCA 90 bp | TCCATGATGAAAAGGAAAAGTCAATACCTGAGAACCCAGATACATTaGATAACACTCACTGACATTCCATCCAAGGCTACAATACATTTA | + |
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Preference number: 1 (lower is better) Translates to: SMMKRKSQYLRTQIH*ITLTDIPSKATIHL Trigger: TAAATGTATTGTAGCCTTGGATGGAATGTCAGTGAGTGTTATGCAATGTATCTGGGTTCTCAGGTATTGACTTTTCCTTTTCATCATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR GCA 90 bp | AGAACCAATCATCTAGATTGTACTAACGTGTATTTATCTCCAAGCTaGTATAGGAACTTTATTTATTTCCCTCTGTCAGCTCAGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RTNHLDCTNVYLSPS*YRNFIYFPLSAQKK Trigger: TTTCTTCTGAGCTGACAGAGGGAAATAAATAAAGTTCCTATAGCAGCTTGGAGATAAATACACGTTAGTACAATCTAGATGATTGGTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTGCAGCAGGGGTCCAAACTTTGGTaGCCATCATATTATTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: MCHEERGMLQMKDLWLQQGSKLW*PSYYSA Trigger: GGCTGAATAATATGATGGTCACCAAAGTTTGGACCC...CTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGACAGCGCTGGTCTTGCTGGAGTGATTTCCCACCTCAGTTCTGCTTTTTTCAAAGGGCAGGCATaGCCATCCATAGGAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LLDSAGLAGVISHLSSAFFKGQA*PSIGKS Trigger: GGATTTTCCTATGGATGGTCATGCCTGCCCTTTGAA...AAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCCAGGAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTGCAGCAGTTGGCATGTGTATTCTaGAGGGATGTTTCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: MCHEERGMLQMKDLWLQQLACVF*RDVSVC Trigger: ACACACAGAAACATCCCTTCAGAATACACATGCCAA...CTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACATAGTCTCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTCTGGTCTTGCTGGAGTaGTTTCCCACCTCAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ADIVSAAFALLNGFGLEALVLLE*FPTSVL Trigger: CAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAG...AGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACTATGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTGCAGCAGCACTGTCATGATGCATaGGATATACGTCTGAATCAT | + |
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Preference number: 2 (lower is better) Translates to: MCHEERGMLQMKDLWLQQHCHDA*DIRLNH Trigger: ATGATTCAGACGTATATCCCATGCATCATGACAGTG...CTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTGCAGCAGCTCACTTTTGGGATATaGATAACTCCCAAATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: MCHEERGMLQMKDLWLQQLTFGI*ITPKFQ Trigger: TTGAAATTTGGGAGTTATGCATATCCCAAAAGTGAG...CTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGACAGCGCTGGTCTTGCTGGAGTGATTTCCCACCTCAGTTCTGCTTTTACATCCGATTCTGAATaGACCAAGGCATTTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLDSAGLAGVISHLSSAFTSDSE*TKAFVL Trigger: AAGAACAAATGCCTTGGTCCATTCAGAATCGGATGT...AAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTTCAGCACAGGAGCAGCTGGAACTTCTGGGGGAGGCTTTGATATCTTCTAAAGAATCACTGTCATaGTGCATGGGATATACGTCT | + |
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Preference number: 2 (lower is better) Translates to: SPSAQEQLELLGEALISSKESLS*CMGYTS Trigger: AGACGTATATCCCATGCATCATGACAGTGATTCTTT...AGAAGATATCAAAGCCTCCCCCAGAAGTTCCAGCTGCTCCTGTGCTGAAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACATAGTCTCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTTTCTGGGGGAGGCTTTaGTATCTTCTTTTTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ADIVSAAFALLNGFGLEAFWGRL*YLLFGF Trigger: AAAGCCAAAAAGAAGATATCAAAGCCTCCCCCAGAA...AGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACTATGTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACATAGTCTCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTTTTGACATCCGATTCTaGATGGACCAAGGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: ADIVSAAFALLNGFGLEAFDIRF*MDQGIC Trigger: ACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAA...AGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACTATGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACTCCAGCACACAGTTCTaGTTAAGGGCAGTGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: VYKMDISIKCFPSTNPEHSSTQF*LRAVPM Trigger: CATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGA...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR CAA 90 bp | GAGAACGTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATaGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: ENVLFCRYYEKLQRS*HMTSSTQFWLRAVP Trigger: TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGACGTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
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| 3UTR-3UTR TCA 90 bp | ACCGTCATAACAATGTATTCACCTGTAATAGATTTGATAGTCTCGCTTGATACACTTTGGCACCTCCACTaGCTTCTCAGGGCCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TVITMYSPVIDLIVSLDTLWHLH*LLRAFG Trigger: ACCAAAGGCCCTGAGAAGTCAGTGGAGGTGCCAAAG...TGTATCAAGCGAGACTATCAAATCTATTACAGGTGAATACATTGTTATGACGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACATGGGAAGTTTTGGGTaGCAGTTTGATTTCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: VYKMDISIKCFPSTNPEHMGSFG*QFDFMG Trigger: CCCCATGAAATCAAACTGTCACCCAAAACTTCCCAT...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR TCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACGACCTGTATCAAATTTaGCGCAGGTCATCTGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VYKMDISIKCFPSTNPEHDLYQI*RRSSVR Trigger: CCTAACAGATGACCTGCGTCAAATTTGATACAGGTC...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTTTGACATCCGATTCTGAATGGACCAAGGCATTTGTTCTTTTCCTCATGATACAGTCTGCCCAATaGGGTCATATTGAACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLLTSDSEWTKAFVLFLMIQSAQ*GHIELS Trigger: GCTTAGTTCAATATGACCTCATTGGGCAGACTGTAT...CATGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCATTGCATAACACTCACTaGCATTCCATCCAAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: DSVYKMDISIKCFPSTNPLHNTH*HSIQGY Trigger: GTAGCCTTGGATGGAATGTCAGTGAGTGTTATGCAA...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR CAA 90 bp | CAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCTaGCTCCAACTTTCCATAATGCTCTGTGTTCTATCCAATTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: QCKRVYHISLLALFL*LQLSIMLCVLSNLN Trigger: GTTCAAATTGGATAGAACACAGAGCATTATGGAAAGTTGGAGCAAGAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAGACTTTTATTTGGATGATTCTGGTAGAGTGGGCAAACTGTGTTATGTGGAGGCTTCACTGTATTaGTCAGTCTTTGTTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: CADFYLDDSGRVGKLCYVEASLY*SVFVLF Trigger: GAACAAAACAAAGACTGATCAATACAGTGAAGCCTC...CACATAACACAGTTTGCCCACTCTACCAGAATCATCCAAATAAAAGTCTGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTCAATCCATGTCTGTCTGAAGAACACATCCATAGTGTATTCCATTTCACGGGCCCAAAGCTGGTaGCATATATATCAGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLSIHVCLKNTSIVYSISRAQSW*HIYQFS Trigger: TGAAAACTGATATATATGTCACCAGCTTTGGGCCCG...TGAAATGGAATACACTATGGATGTGTTCTTCAGACAGACATGGATTGACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTTTGACATCCGATTCTGAATGGACCAAGGCATTTGTTCTTTTCCTCATGAGATCATCTCACTTTTaGGATATGCATAACTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LLLTSDSEWTKAFVLFLMRSSHF*DMHNSQ Trigger: TTGGGAGTTATGCATATCCCAAAAGTGAGATGATCT...CATGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR CAA 90 bp | TTATTCAGCCTCAAGATTTCAATTGGGCCGTCATATTTTAGTCTTTaGTCAATCCATGTCTGTCTGAAGAACACATCCATAGTGTATTCC | + |
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Preference number: 2 (lower is better) Translates to: LFSLKISIGPSYFSL*SIHVCLKNTSIVYS Trigger: GGAATACACTATGGATGTGTTCTTCAGACAGACATGGATTGACAAAAGACTAAAATATGACGGCCCAATTGAAATCTTGAGGCTGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACCAATCATCTAGATTGTACTAACGTGTATTTATCTCCAAGCTGCTATAAAGGTCATTGCATATaGCTTCCAGCACACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LRTNHLDCTNVYLSPSCYKGHCI*LPAHSS Trigger: AGAACTGTGTGCTGGAAGTCATATGCAATGACCTTT...ATAGCAGCTTGGAGATAAATACACGTTAGTACAATCTAGATGATTGGTTCTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR GCA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAAGAACCCAGATACATTaGATAACACTCACTGACATT | + |
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Preference number: 2 (lower is better) Translates to: DSVYKMDISIKCFPSTNPRTQIH*ITLTDI Trigger: AATGTCAGTGAGTGTTATGCAATGTATCTGGGTTCT...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR TCA 72 bp | CCGCAATGTGCCATGAGGAGAGGGGGATGCTGCAGATaGAAGACCTCTGGCTGCAGCAGACATAGTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: PQCAMRRGGCCR*KTSGCSRHSLS Trigger: GCTGAGACTATGTCTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACATTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR GCA 72 bp | GAGTGGAAGCTGACCCCAAAGAAGCTGGCCGCAATGTaGCATGAGGAGAGGGGGATGCTGCAGATGAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EWKLTPKKLAAM*HEERGMLQMKD Trigger: GTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACATTGCGGCCAGCTTCTTTGGGGTCAGCTTCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CAA 90 bp | AAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTGATTTCCCACCTCAGTTCTGCCTTCTGGGGGAGGCTTaGATATCTTCTTTTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: KTPGQRWSCWSDFPPQFCLLGEA*ISSFWL Trigger: AAGCCAAAAAGAAGATATCAAAGCCTCCCCCAGAAG...GCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 72 bp | TCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTaGTTTCCCACCTCAGTTCTGCTTTTGACATCCGAT | + |
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Preference number: 3 (lower is better) Translates to: SEDSWTALVLLE*FPTSVLLLTSD Trigger: ATCGGATGTCAAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 72 bp | AGTGGGCAAACTGTGTTATGTGACCTGTATCAAATTTaGCGCAGGTCATCTGTTAGGCTCTCCAGGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SGQTVLCDLYQI*RRSSVRLSRAQ Trigger: CTGGGCCCTGGAGAGCCTAACAGATGACCTGCGTCAAATTTGATACAGGTCACATAACACAGTTTGCCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGACATAGTCTCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTGCCTCAAGATTTCAATaGGGCCGTCATATTTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: ADIVSAAFALLNGFGLEAASRFQ*GRHILV Trigger: GACTAAAATATGACGGCCCAATTGAAATCTTGAGGC...AGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACTATGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGACATAGTCTCAGCTGCATTTGCCCTGCTGAATGGATTTGGACTGGAAGCTTCAGGGGTCCAAACTTaGGTGACCATCATATTATTC | + |
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Preference number: 3 (lower is better) Translates to: ADIVSAAFALLNGFGLEASGVQT*VTIILF Trigger: GAATAATATGATGGTCACCAAAGTTTGGACCCCTGA...AGCTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACTATGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR CCA 72 bp | CAGGGCCTTTGGTCCAGGTGTAGATCATCTCACTTTTaGGATATGCATAACTCCCAAATTTCAAAGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QGLWSRCRSSHF*DMHNSQISKGR Trigger: CCTGCCCTTTGAAATTTGGGAGTTATGCATATCCCAAAAGTGAGATGATCTACACCTGGACCAAAGGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
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| 3UTR TCA 72 bp | TCTTGCTGGAGTGATTTCCCACCTCAGTTCTGCTTTTaGCATCCGATTCTGAATGGACCAAGGCATTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SCWSDFPPQFCF*HPILNGPRHLF Trigger: GAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGTGGGAAATCACTCCAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| 3UTR TCA 72 bp | GTCAGAAAACACATTTGCCCTGGTCGGCATCTGTATTaGTATAGCAGAGGCTTCACTGTATTGATCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRKHICPGRHLY*YSRGFTVLISL Trigger: AAGACTGATCAATACAGTGAAGCCTCTGCTATATCAATACAGATGCCGACCAGGGCAAATGTGTTTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR CCA 72 bp | CGTGAGGACTGTGGTTATTCCAAATACAGTTCTAGCTaGAACAGACTCCTTGTTTATCCAGAAGGAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: REDCGYSKYSSS*NRLLVYPEGNL Trigger: CAAGTTTCCTTCTGGATAAACAAGGAGTCTGTTCCAGCTAGAACTGTATTTGGAATAACCACAGTCCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| 3UTR TCA 72 bp | ATTTCCCACCTCAGTTCTGCTTTTGACATCCGATTCTaGATGGACCAAGGCATTTGTTCTTTTCCTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: ISHLSSAFDIRF*MDQGICSFPHV Trigger: AACATGAGGAAAAGAACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGTGGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| 3UTR GCA 72 bp | AAAAGGAAAAGTCAATACCTGAGAACCCAGATACATTaGATAACACTCACTGACATTCCATCCAAGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: KRKSQYLRTQIH*ITLTDIPSKAT Trigger: TGTAGCCTTGGATGGAATGTCAGTGAGTGTTATGCAATGTATCTGGGTTCTCAGGTATTGACTTTTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACGAAGAAACAAATATGTaGGCTATGTTGTCTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VYKMDISIKCFPSTNPEHEETNM*AMLSDS Trigger: AGAGTCAGACAACATAGCCAACATATTTGTTTCTTC...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR TCA 72 bp | TTATGGTTCTTTAACATGCATTGGCTGTCCTACTATTaGAATATCTTTGTAAAGGCGAGAGAGCTTCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWFFNMHWLSYY*NIFVKARELPW Trigger: CCAAGGAAGCTCTCTCGCCTTTACAAAGATATTTCAATAGTAGGACAGCCAATGCATGTTAAAGAACCATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR TCA 72 bp | AAACAAATACAAAACGTGCCAGACATACAGATGTTATaGGCACAGAATCTTGCGAGGACATTAGCATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQIQNVPDIQML*AQNLARTLAFQ Trigger: CTGAAATGCTAATGTCCTCGCAAGATTCTGTGCTCATAACATCTGTATGTCTGGCACGTTTTGTATTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR CCA 72 bp | TATTTCCCTCTGTCAGCTCAGAAGAAACAAATATGTTaGCTATGTTGTCTGACTCTAACTAAATTGCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: YFPLSAQKKQIC*LCCLTLTKLPS Trigger: TGAAGGCAATTTAGTTAGAGTCAGACAACATAGCCAACATATTTGTTTCTTCTGAGCTGACAGAGGGAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR GCA 72 bp | CATCTAGATTGTACTAACGTGTATTTATCTCCAAGCTaGTATAGGAACTTTATTTATTTCCCTCTGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLDCTNVYLSPS*YRNFIYFPLSA Trigger: AGCTGACAGAGGGAAATAAATAAAGTTCCTATAGCAGCTTGGAGATAAATACACGTTAGTACAATCTAGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR TCA 72 bp | TTCTTTAATAGAGAACGTCTTATTTTGCAGGTACTATaGAAAACTGCAAAGGTCATTGCATATGACTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FFNRERLILQVL*KTAKVIAYDFQ Trigger: CTGGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGACGTTCTCTATTAAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGGGGAGGAGGTGTGGCTaGCACATTCCCAGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVGRRCG*HIPSSP Trigger: GGGGCTGCTGGGAATGTGTCAGCCACACCTCCTCCC...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTGGGAGGAGGTGTGGCTaGCACATTCCCAGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVGRRCG*HIPSSP Trigger: GGGGCTGCTGGGAATGTGTCAGCCACACCTCCTCCC...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGGGGGGATGCTGCAGATaGAAGACCTCTGGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVGGCCR*KTSGCS Trigger: GCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCC...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGCAGGGGGAGGAGGTGTaGCTGACACATTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVQGEEV*LTHSQQ Trigger: CTGCTGGGAATGTGTCAGCCACACCTCCTCCCCCTG...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTGGGGGATGCTGCAGATaGAAGACCTCTGGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVGGCCR*KTSGCS Trigger: GCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCC...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGCAGCACAGGAGCAGCTaGAACTTCTGGGGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVQHRSS*NFWGRL Trigger: AAGCCTCCCCCAGAAGTTCCAGCTGCTCCTGTGCTG...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCATGAGGAGAGGGGGATGCTGCAGATGAAAGACCTCTGGCTGCAGCAGCAATTTCTCGTCCTTTaGGTTCTGTCCTGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: MCHEERGMLQMKDLWLQQQFLVL*VLSWGF Trigger: GAATCCCCAGGACAGAACTCAAAGGACGAGAAATTG...CTGCTGCAGCCAGAGGTCTTTCATCTGCAGCATCCCCCTCTCCTCATGGCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGCTTTGGCACCTCCACTaGCTTCTCAGGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVLWHLH*LLRAFG Trigger: ACCAAAGGCCCTGAGAAGTCAGTGGAGGTGCCAAAG...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTGATTCAATTTCTCGTCCTTTaGGTTCTGTCCTGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRGFRRLLDSAGLAGVIQFLVL*VLSWGF Trigger: GAATCCCCAGGACAGAACTCAAAGGACGAGAAATTG...AATCACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197994.2 ENSMUST00000198138.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGATTTGACATCCGATTCTaGATGGACCAAGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLRRGFRRLLDSAGLAGFDIRF*MDQGIC Trigger: ACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAA...TCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198138.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTGGACAGCGCTGGTCTTaGTGGAGTGATTTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVGQRWS*WSDFPP Trigger: AGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCC...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGAATCCACCAGTCTCATaGGGCACTCCGCACTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVNPPVS*GTPHLW Trigger: CCATAAGTGCGGAGTGCCCCATGAGACTGGTGGATT...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTCTGGTCTTGCTGGAGTaGTTTCCCACCTCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVLVLLE*FPTSVL Trigger: CAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAG...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGCTGCATTTGCCCTGCTaGATGGATTTGGACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVLHLPC*MDLDWK Trigger: CTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAG...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAACATCCGATTCTGAATaGACCAAGGCATTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLRRGFRRLLDSAGLAGTSDSE*TKAFVL Trigger: AAGAACAAATGCCTTGGTCCATTCAGAATCGGATGT...TCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198138.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGTTCAAAGGGCAGGCATaGCCATCCATAGGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVFKGQA*PSIGKS Trigger: GGATTTTCCTATGGATGGTCATGCCTGCCCTTTGAA...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAAGCCCATCTTCCGTCTaGGGTGGAAGTAAACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPSPSSV*GGSKPS Trigger: TGACGGTTTACTTCCACCTCAGACGGAAGATGGGCT...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGACAGCGCTGGTCTTaGTGGAGTGATTTCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANGQRWS*WSDFPP Trigger: AGGTGGGAAATCACTCCAGCAAGACCAGCGCTGTCC...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTTCGCATAGGACACTTTaGGCAAAGAATGCCGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVSHRTL*AKNAEH Trigger: GTGCTCGGCATTCTTTGCCCAAAGTGTCCTATGCGA...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTGTCCTCATGTTCAAATTaGCATGTGTATTCCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRGFRRLLDSAGLAGVSSCSN*HVYSPN Trigger: ATTTGGGGAATACACATGCCAATTTGAACATGAGGA...CACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198138.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGGGGTCCAAACTTTGGTaGCCATCATATTATTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVGSKLW*PSYYSA Trigger: GGCTGAATAATATGATGGTCACCAAAGTTTGGACCC...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATAGCCCATCTTCCGTCTaGGGTGGAAGTAAACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANSPSSV*GGSKPS Trigger: TGACGGTTTACTTCCACCTCAGACGGAAGATGGGCT...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATCTGGTCTTGCTGGAGTaGTTTCCCACCTCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANLVLLE*FPTSVL Trigger: CAGAACTGAGGTGGGAAATCACTCCAGCAAGACCAG...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCATTCAAAGGGCAGGCATaGCCATCCATAGGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPFKGQA*PSIGKS Trigger: GGATTTTCCTATGGATGGTCATGCCTGCCCTTTGAA...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGCCAATGAGGTCATATTaGACTAAGCTAGAAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVPMRSY*TKLEDS Trigger: GGAGTCTTCTAGCTTAGTTCAATATGACCTCATTGG...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCAGGGCGAGTGGAAGCTaGCCCCAAAGAAGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLRASGS*PQRSWP Trigger: CGGCCAGCTTCTTTGGGGTCAGCTTCCACTCGCCCT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCAGGGCGAGTGGAAGCTaGCCCCAAAGAAGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSRASGS*PQRSWP Trigger: CGGCCAGCTTCTTTGGGGTCAGCTTCCACTCGCCCT...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATCAATTTCTCGTCCTTTaGGTTCTGTCCTGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANQFLVL*VLSWGF Trigger: GAATCCCCAGGACAGAACTCAAAGGACGAGAAATTG...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCACGGGCCCAAAGCTGGTaGCATATATATCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPRAQSW*HIYQFS Trigger: TGAAAACTGATATATATGTCACCAGCTTTGGGCCCG...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTTTTGACATCCGATTCTaGATGGACCAAGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTVLVKGSANGKFWVTVFDIRF*MDQGIC Trigger: ACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAA...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACGGACTGGAAGCTAAGTaGGCCTTAGGCGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHGLEAK*ALGVAS Trigger: TGAAGCCACGCCTAAGGCTCACTTAGCTTCCAGTCC...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CCA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCACAGCACAGGAGCAGCTaGAACTTCTGGGGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSVYKMDISIKCFPSTNPQHRSS*NFWGRL Trigger: AAGCCTCCCCCAGAAGTTCCAGCTGCTCCTGTGCTG...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR TCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGTCCAAACTTTGGTaGCCATCATATTATTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANGSKLW*PSYYSA Trigger: GGCTGAATAATATGATGGTCACCAAAGTTTGGACCC...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCATTCTGGGGGAGGCTTTaGTATCTTCTTTTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPFWGRL*YLLFGF Trigger: AAAGCCAAAAAGAAGATATCAAAGCCTCCCCCAGAA...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR GCA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGGTAGACCATGTTAAATaGTCCAAATGTGACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFQHTVLVKGSANGKFWVVDHVK*SKCDWK Trigger: TTTCCAGTCACATTTGGAGCATTTAACATGGTCTAC...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACCAATCATCTAGATTGTACTAACGTGTATTTATCTCCAAGCTGCTATCAGGGGGAGGAGGTGTaGCTGACACATTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRTNHLDCTNVYLSPSCYQGEEV*LTHSQQ Trigger: CTGCTGGGAATGTGTCAGCCACACCTCCTCCCCCTG...ATAGCAGCTTGGAGATAAATACACGTTAGTACAATCTAGATGATTGGTTCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCCTTTGGCACCTCCACTaGCTTCTCAGGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLLWHLH*LLRAFG Trigger: ACCAAAGGCCCTGAGAAGTCAGTGGAGGTGCCAAAG...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATTTGGCATGTGTATTCTaGAGGGATGTTTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANLACVF*RDVSVC Trigger: ACACACAGAAACATCCCTTCAGAATACACATGCCAA...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCGGACTGGAAGCTAAGTaGGCCTTAGGCGTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLGLEAK*ALGVAS Trigger: TGAAGCCACGCCTAAGGCTCACTTAGCTTCCAGTCC...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACTCGCATAGGACACTTTaGGCAAAGAATGCCGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHSHRTL*AKNAEH Trigger: GTGCTCGGCATTCTTTGCCCAAAGTGTCCTATGCGA...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR GCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACAGTCTCAGCTGCATTTaGCCTGCTGAATGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHSLSCI*PAEWIW Trigger: CCAAATCCATTCAGCAGGGCAAATGCAGCTGAGACT...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCAATCCACCAGTCTCATaGGGCACTCCGCACTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSNPPVS*GTPHLW Trigger: CCATAAGTGCGGAGTGCCCCATGAGACTGGTGGATT...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| 3UTR CAA 72 bp | GGGATAAGCAGACAAAAGGCCTGTGCAGACTTTTATTaGGATGATTCTGGTAGAGTGGGCAAACTGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GISRQKACADFY*DDSGRVGKLCY Trigger: ATAACACAGTTTGCCCACTCTACCAGAATCATCCAAATAAAAGTCTGCACAGGCCTTTTGTCTGCTTATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCCTGCATTTGCCCTGCTaGATGGATTTGGACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLLHLPC*MDLDWK Trigger: CTTCCAGTCCAAATCCATTCAGCAGGGCAAATGCAG...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACTTGGCATGTGTATTCTaGAGGGATGTTTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHLACVF*RDVSVC Trigger: ACACACAGAAACATCCCTTCAGAATACACATGCCAA...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR GCA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATCTCACTTTTGGGATATaGATAACTCCCAAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVIAYDFQHTVLVKGSANLTFGI*ITPKFQ Trigger: TTGAAATTTGGGAGTTATGCATATCCCAAAAGTGAG...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCCGGGCCCAAAGCTGGTaGCATATATATCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSRAQSW*HIYQFS Trigger: TGAAAACTGATATATATGTCACCAGCTTTGGGCCCG...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCCACACTTGCATGTTTTaGAACAATCCGTACCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSHTCMF*NNPYPQ Trigger: TTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTG...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACCACTGTCATGATGCATaGGATATACGTCTGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHHCHDA*DIRLNH Trigger: ATGATTCAGACGTATATCCCATGCATCATGACAGTG...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CCA 90 bp | GTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGAACACACATCCGATTCTGAATaGACCAAGGCATTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYKMDISIKCFPSTNPEHTSDSE*TKAFVL Trigger: AAGAACAAATGCCTTGGTCCATTCAGAATCGGATGT...GTGTTCTGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR TCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCCCAATGAGGTCATATTaGACTAAGCTAGAAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSPMRSY*TKLEDS Trigger: GGAGTCTTCTAGCTTAGTTCAATATGACCTCATTGG...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCATACAGTCTGCCCAATaGGGTCATATTGAACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLIQSAQ*GHIELS Trigger: GCTTAGTTCAATATGACCTCATTGGGCAGACTGTAT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCTTCTGGGGGAGGCTTTaGTATCTTCTTTTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLFWGRL*YLLFGF Trigger: AAAGCCAAAAAGAAGATATCAAAGCCTCCCCCAGAA...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCTTTGACATCCGATTCTaGATGGACCAAGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSFDIRF*MDQGIC Trigger: ACAAATGCCTTGGTCCATTCAGAATCGGATGTCAAA...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGACTTTTATTTGGATGATTCTGGTAGAGTGGGCAAACTGTGTTATGTGGTAGACCATGTTAAATaGTCCAAATGTGACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CADFYLDDSGRVGKLCYVVDHVK*SKCDWK Trigger: TTTCCAGTCACATTTGGAGCATTTAACATGGTCTAC...CACATAACACAGTTTGCCCACTCTACCAGAATCATCCAAATAAAAGTCTGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| 3UTR CAA 72 bp | TTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATaGCATATGACTTCCAGCACACAGTTCTGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCRYYEKLQRS*HMTSSTQFWLR Trigger: CCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| 3UTR CAA 72 bp | TTTCCATTCCTGAAGAAAGTATCAGGGGTCCAAACTTaGGTGACCATCATATTATTCAGCCTCAAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPFLKKVSGVQT*VTIILFSLKIS Trigger: TGAAATCTTGAGGCTGAATAATATGATGGTCACCAAAGTTTGGACCCCTGATACTTTCTTCAGGAATGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCAAAGAATCACTGTCATaGTGCATGGGATATACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLKESLS*CMGYTS Trigger: AGACGTATATCCCATGCATCATGACAGTGATTCTTT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCACATCCGATTCTGAATaGACCAAGGCATTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLTSDSE*TKAFVL Trigger: AAGAACAAATGCCTTGGTCCATTCAGAATCGGATGT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCTGCTCCAAATGTGACTaGAAAGAGAATACGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLCSKCD*KENTSI Trigger: TATGCTCGTATTCTCTTTCCAGTCACATTTGGAGCA...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCTGCTCCAAATGTGACTaGAAAGAGAATACGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSCSKCD*KENTSI Trigger: TATGCTCGTATTCTCTTTCCAGTCACATTTGGAGCA...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR GCA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCACTCACTTTTGGGATATaGATAACTCCCAAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSVYKMDISIKCFPSTNPLTFGI*ITPKFQ Trigger: TTGAAATTTGGGAGTTATGCATATCCCAAAAGTGAG...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCAGATCATCTCACTTTTaGGATATGCATAACTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FKFQCKRVYHISLLALFLRSSHF*DMHNSQ Trigger: TTGGGAGTTATGCATATCCCAAAAGTGAGATGATCT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCAGATCATCTCACTTTTaGGATATGCATAACTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSRSSHF*DMHNSQ Trigger: TTGGGAGTTATGCATATCCCAAAAGTGAGATGATCT...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAACAATTTCTCGTCCTTaGAGTTCTGTCCTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSLRRGFRRLLDSAGLAGTISRP*SSVLGI Trigger: AATCCCCAGGACAGAACTCAAAGGACGAGAAATTGT...TCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197994.2 ENSMUST00000198138.2 |
||
| CDS TCA 90 bp | GACAGGCAGACCAGAGACGGACAGACAGAGCACACTTGCATGTTTTaGAACAATCCGTACCCCCAAATCCAGGACGCAGCCTGTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DRQTRDGQTEHTCMF*NNPYPQIQDAACCH Trigger: ATGACAACAGGCTGCGTCCTGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGTCTGCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTAGGCGTGGCTTCAGAAGACTCCTGGACAGCGCTGGTCTTGCTGGAGTGAATGGACCAAGGCATTaGTTCTTTTCCTCATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRRGFRRLLDSAGLAGVNGPRH*FFSSCS Trigger: TGAACATGAGGAAAAGAACAAATGCCTTGGTCCATT...CACTCCAGCAAGACCAGCGCTGTCCAGGAGTCTTCTGAAGCCACGCCTAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198138.2 |
||
| CDS-3UTR CAA 90 bp | GACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAATTTCTCGTCCTTaGAGTTCTGTCCTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: DFQHTVLVKGSANGKFWVTISRP*SSVLGI Trigger: AATCCCCAGGACAGAACTCAAAGGACGAGAAATTGT...CACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTGCTGGAACAGACTCCTaGTTTATCCAGAAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QHTVLVKGSANGKFWVTVAGTDS*FIQKET Trigger: AGTTTCCTTCTGGATAAACAAGGAGTCTGTTCCAGC...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTCTTCTGGGGGAGGCTTaGATATCTTCTTTTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHTVLVKGSANGKFWVTVLLGEA*ISSFWL Trigger: AAGCCAAAAAGAAGATATCAAAGCCTCCCCCAGAAG...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACACAGTTCTGGTTAAGGGCAGTGCCAATGGGAAGTTTTGGGTGACAGTTACCTCAGTTCTGCTTTaGACATCCGATTCTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QHTVLVKGSANGKFWVTVTSVLL*TSDSEW Trigger: CCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGT...AACTGTCACCCAAAACTTCCCATTGGCACTGCCCTTAACCAGAACTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCATCAGGGGTCCAAACTTaGGTGACCATCATATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPSGVQT*VTIILF Trigger: GAATAATATGATGGTCACCAAAGTTTGGACCCCTGA...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATACCTCAGTTCTGCTTTaGACATCCGATTCTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KVIAYDFQHTVLVKGSANTSVLL*TSDSEW Trigger: CCATTCAGAATCGGATGTCAAAAGCAGAACTGAGGT...ATTGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTCATTGCATATGACTTCCAGCACACAGTTCTGGTTAAGGGCAGTGCCAATTTGTCTATTTTACTaGTGCCAGATCCAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRSLHMTSSTQFWLRAVPICLFY*CQIQKA Trigger: CGCCTTCTGGATCTGGCACAAGTAAAATAGACAAAT...TGGCACTGCCCTTAACCAGAACTGTGTGCTGGAAGTCATATGCAATGACCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGACATATATATCAGTTTTCACTTCTGTAACAGGACCCCCAAATCCAGGACAATTTCTCGTCCTTaGAGTTCTGTCCTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: AGDIYISFHFCNRTPKSRTISRP*SSVLGI Trigger: AATCCCCAGGACAGAACTCAAAGGACGAGAAATTGT...CCTGGATTTGGGGGTCCTGTTACAGAAGTGAAAACTGATATATATGTCACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197994.2 |
||
| CDS-3UTR CAA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAACAATTTCTCGTCCTTaGAGTTCTGTCCTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: DSVYKMDISIKCFPSTNPTISRP*SSVLGI Trigger: AATCCCCAGGACAGAACTCAAAGGACGAGAAATTGT...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CAA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAGCCTCAAGATTTCAATaGGGCCGTCATATTTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSVYKMDISIKCFPSTNPASRFQ*GRHILV Trigger: GACTAAAATATGACGGCCCAATTGAAATCTTGAGGC...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCGCTGGAACAGACTCCTaGTTTATCCAGAAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FKFQCKRVYHISLLALFLAGTDS*FIQKET Trigger: AGTTTCCTTCTGGATAAACAAGGAGTCTGTTCCAGC...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCTCAGGGGTCCAAACTTaGGTGACCATCATATTATTC | + |
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Preference number: 5 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSSGVQT*VTIILF Trigger: GAATAATATGATGGTCACCAAAGTTTGGACCCCTGA...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
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| CDS-3UTR CAA 90 bp | GATTCTGTCTATAAGATGGACATTTCTATCAAATGTTTCCCCTCGACAAACCCAAATGGACCAAGGCATTaGTTCTTTTCCTCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: DSVYKMDISIKCFPSTNPNGPRH*FFSSCS Trigger: TGAACATGAGGAAAAGAACAAATGCCTTGGTCCATT...TGGGTTTGTCGAGGGGAAACATTTGATAGAAATGTCCATCTTATAGACAGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031121.10 |
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| CDS-3UTR CAA 90 bp | GTCTTATTTTGCAGGTACTATGAAAAACTGCAAAGGTCATTGCATATGACTTCCACAGACAGAGCACACTaGCATGTTTTGAAACAATCC | + |
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Preference number: 5 (lower is better) Translates to: VLFCRYYEKLQRSLHMTSTDRAH*HVLKQS Trigger: GGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGT...GGAAGTCATATGCAATGACCTTTGCAGTTTTTCATAGTACCTGCAAAATAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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| CDS-3UTR CAA 90 bp | TTCAAATTTCAATGCAAAAGGGTGTACCACATATCTCTCCTAGCTCTATTTCTCAATGGACCAAGGCATTaGTTCTTTTCCTCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FKFQCKRVYHISLLALFLNGPRH*FFSSCS Trigger: TGAACATGAGGAAAAGAACAAATGCCTTGGTCCATT...GAGAAATAGAGCTAGGAGAGATATGTGGTACACCCTTTTGCATTGAAATTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031121.10 ENSMUST00000199357.2 |
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| CDS TCA 72 bp | ACCAGAGACGGACAGACAGAGCACACTTGCATGTTTTaGAACAATCCGTACCCCCAAATCCAGGACGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TRDGQTEHTCMF*NNPYPQIQDAA Trigger: GGCTGCGTCCTGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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| CDS CAA 72 bp | GACCAGAGACGGACAGACAGAGCACACTTGCATGTTTaGAAACAATCCGTACCCCCAAATCCAGGACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DQRRTDRAHLHV*KQSVPPNPGRS Trigger: GCTGCGTCCTGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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| CDS CAA 90 bp | AGACAGGCAGACCAGAGACGGACAGACAGAGCACACTTGCATGTTTaGAAACAATCCGTACCCCCAAATCCAGGACGCAGCCTGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: RQADQRRTDRAHLHV*KQSVPPNPGRSLLS Trigger: TGACAACAGGCTGCGTCCTGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGTCTGCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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| CDS CAA 90 bp | TCCACAAATAGACAGGCAGACCAGAGACGGACAGACAGAGCACACTaGCATGTTTTGAAACAATCCGTACCCCCAAATCCAGGACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: STNRQADQRRTDRAH*HVLKQSVPPNPGRS Trigger: GCTGCGTCCTGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGTCTGCCTGTCTATTTGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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| CDS CAA 72 bp | AGACAGGCAGACCAGAGACGGACAGACAGAGCACACTaGCATGTTTTGAAACAATCCGTACCCCCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: RQADQRRTDRAH*HVLKQSVPPNP Trigger: TGGATTTGGGGGTACGGATTGTTTCAAAACATGCAAGTGTGCTCTGTCTGTCCGTCTCTGGTCTGCCTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199357.2 |
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