Pregenerated sensors for GABRA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031343Ensembl transcript IDs: ENSMUST00000055966.13, ENSMUST00000114554.3
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACAACCAGCAGCTAATGATACACCCCTTAGGAGCCTTGCTCAGTaGGTGGGCAGGAAGAATCTGCTTGTGGTGCTATTTGTGGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: RQPAANDTPLRSLAQ*VGRKNLLVVLFVAF Trigger: AAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTATCATTAGCTGCTGGTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CCA 90 bp | CCCTTAGGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTGCTTGTaGTGCTATTTGTGGCTTTTACCTTTGACCTTAAGGATATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLGALLSEWAGRICL*CYLWLLPLTLRICW Trigger: CCAGCATATCCTTAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CCA 90 bp | AACCAGCAGCTAATGATACACCCCTTAGGAGCCTTGCTCAGTGAGTaGGCAGGAAGAATCTGCTTGTGGTGCTATTTGTGGCTTTTACCT | + |
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Preference number: 1 (lower is better) Translates to: NQQLMIHPLGALLSE*AGRICLWCYLWLLP Trigger: AGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTATCATTAGCTGCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR GCA 90 bp | TTAGGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTGCTTGTGGTaGTATTTGTGGCTTTTACCTTTGACCTTAAGGATATGCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: LGALLSEWAGRICLW*YLWLLPLTLRICWT Trigger: AGTCCAGCATATCCTTAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR GCA 90 bp | ATACACCCCTTAGGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTaGTTGTGGTGCTATTTGTGGCTTTTACCTTTGACCTTAAGGATA | + |
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Preference number: 1 (lower is better) Translates to: IHPLGALLSEWAGRI*LWCYLWLLPLTLRI Trigger: TATCCTTAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 90 bp | AATGGGACTTTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTaGGGGGCTGACTTAAACTACAATAGAGCCCACTGCTCTAACGTT | + |
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Preference number: 1 (lower is better) Translates to: NGTFLKETYIQALLS*GADLNYNRAHCSNV Trigger: AACGTTAGAGCAGTGGGCTCTATTGTAGTTTAAGTCAGCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 90 bp | ATATGCCTAGTAAGCACTAATGGGTATCAGGTAAGTAAGATTATATaGGATAGCCCAGCCGACTCTGTAGTGAGTCAGAACCATCCAATG | + |
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Preference number: 1 (lower is better) Translates to: ICLVSTNGYQVSKII*DSPADSVVSQNHPM Trigger: CATTGGATGGTTCTGACTCACTACAGAGTCGGCTGGGCTATCTCATATAATCTTACTTACCTGATACCCATTAGTGCTTACTAGGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 90 bp | ACTGGCTATAAAGGGCTCAATATTATTGAAGCAATGGGACTTTCTTaGAGGAGACATATATTCAGGCACTACTTTCCTGAGGGGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: TGYKGLNIIEAMGLS*RRHIFRHYFPEGLT Trigger: AGTCAGCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTGCTTCAATAATATTGAGCCCTTTATAGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CCA 90 bp | AGCAATACTCAACTGGCTATAAAGGGCTCAATATTATTGAAGCAATaGGACTTTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SNTQLAIKGSILLKQ*DFLEGDIYSGTTFL Trigger: CAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTGCTTCAATAATATTGAGCCCTTTATAGCCAGTTGAGTATTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGTAGACTGGCATACTAAGATGAGAAACTGGACAAATGGCAGTGTTTGGAAGAATCCTGAAACATaGGGGGAGCCCTGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AGVDWHTKMRNWTNGSVWKNPET*GEPWGF Trigger: GAAACCCCAGGGCTCCCCTCATGTTTCAGGATTCTT...CCAAACACTGCCATTTGTCCAGTTTCTCATCTTAGTATGCCAGTCTACCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CAA 90 bp | CACCCCTTAGGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTGCTaGTGGTGCTATTTGTGGCTTTTACCTTTGACCTTAAGGATATGC | + |
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Preference number: 2 (lower is better) Translates to: HPLGALLSEWAGRIC*WCYLWLLPLTLRIC Trigger: GCATATCCTTAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCCCACTGACCTCCAAGGCAAGAAACTATTGGTTACTTCAGAAGTTTCCGGGTATACAGTGCTCTaGTTGCTGTGCTGCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: LSPTDLQGKKLLVTSEVSGYTVL*LLCCHY Trigger: ATAGTGGCAGCACAGCAACCAGAGCACTGTATACCC...GGAAACTTCTGAAGTAACCAATAGTTTCTTGCCTTGGAGGTCAGTGGGGGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CAA 90 bp | GGTAAGCATCAATTGTCCCCCACTGACCTCCAAGGCAAGAAACTATaGGTTACTTCAGAAGTTTCCATAGACTTCTTCCCATTCTACCAG | + |
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Preference number: 2 (lower is better) Translates to: GKHQLSPTDLQGKKL*VTSEVSIDFFPFYQ Trigger: CTGGTAGAATGGGAAGAAGTCTATGGAAACTTCTGAAGTAACCAATAGTTTCTTGCCTTGGAGGTCAGTGGGGGACAATTGATGCTTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGTAGACTGGCATACTAAGATGAGAAACTGGACAAATGGCAGTGTTTGGCTCATGAATACGAATTaGGAAAGTGATTACACTCAG | + |
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Preference number: 2 (lower is better) Translates to: AGVDWHTKMRNWTNGSVWLMNTN*ESDYTQ Trigger: CTGAGTGTAATCACTTTCTCAATTCGTATTCATGAG...CCAAACACTGCCATTTGTCCAGTTTCTCATCTTAGTATGCCAGTCTACCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CAA 90 bp | TTCTCTGTCTCTCATATACATATGTTTGACAGAGGTAAGCATCAATaGTCCCCCACTGACCTCCAAGGCAAGAAACTATTGGTTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: FSVSHIHMFDRGKHQ*SPTDLQGKKLLVTS Trigger: TGAAGTAACCAATAGTTTCTTGCCTTGGAGGTCAGTGGGGGACAATTGATGCTTACCTCTGTCAAACATATGTATATGAGAGACAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGATACAATTTGACTAATTaGTTTGGCAGGAAAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGYNLTN*FGRKVS Trigger: ACTCACTTTCCTGCCAAAGCAATTAGTCAAATTGTA...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 72 bp | GCAGCTAATGATACACCCCTTAGGAGCCTTGCTCAGTaGGTGGGCAGGAAGAATCTGCTTGTGGTGCTATTT | + |
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Preference number: 3 (lower is better) Translates to: AANDTPLRSLAQ*VGRKNLLVVLF Trigger: AAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTATCATTAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CCA 72 bp | CTAATGATACACCCCTTAGGAGCCTTGCTCAGTGAGTaGGCAGGAAGAATCTGCTTGTGGTGCTATTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LMIHPLGALLSE*AGRICLWCYLW Trigger: CCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTATCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR GCA 72 bp | TTAGGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTaGTTGTGGTGCTATTTGTGGCTTTTACCTTTGACC | + |
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Preference number: 3 (lower is better) Translates to: LGALLSEWAGRI*LWCYLWLLPLT Trigger: GGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR CAA 90 bp | CAATGGGACTTTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTGAGGGGCTATACAGTGCTCTGGTaGCTGTGCTGCCACTATTAT | + |
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Preference number: 3 (lower is better) Translates to: QWDFLEGDIYSGTTFLRGYTVLW*LCCHYY Trigger: ATAATAGTGGCAGCACAGCAACCAGAGCACTGTATA...GCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR CCA 72 bp | GAGTGGGCAGGAAGAATCTGCTTGTGGTGCTATTTGTaGCTTTTACCTTTGACCTTAAGGATATGCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: EWAGRICLWCYL*LLPLTLRICWT Trigger: AGTCCAGCATATCCTTAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 72 bp | TTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTaGGGGGCTGACTTAAACTACAATAGAGCCCACTGC | + |
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Preference number: 3 (lower is better) Translates to: FLKETYIQALLS*GADLNYNRAHC Trigger: GCAGTGGGCTCTATTGTAGTTTAAGTCAGCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGTGGCTGAGGCTGTTATACTAAACAATCTCACTCCTTTGAGCCATTACAGCTATTCCTTCACATaGGAAATGAGTGTGGAATAT | + |
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Preference number: 3 (lower is better) Translates to: SKVAEAVILNNLTPLSHYSYSFT*EMSVEY Trigger: ATATTCCACACTCATTTCCAATGTGAAGGAATAGCT...GTAATGGCTCAAAGGAGTGAGATTGTTTAGTATAACAGCCTCAGCCACTTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| 3UTR TCA 72 bp | AAAGGGCTCAATATTATTGAAGCAATGGGACTTTCTTaGAGGAGACATATATTCAGGCACTACTTTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: KGLNIIEAMGLS*RRHIFRHYFPE Trigger: CTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTGCTTCAATAATATTGAGCCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS-3UTR GCA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCCCTCTGGTACCTTCTTaGCTTCCCAAGCCCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCPLVPS*LPKPNS Trigger: GGAGTTGGGCTTGGGAAGGCAAGAAGGTACCAGAGG...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | GTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCCATCTCCAGGGCCTCTaGTACCTTCTTGCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VSGLDASWGIQCSGCCAAHLQGL*YLLAFP Trigger: TGGGAAGGCAAGAAGGTACCAGAGGCCCTGGAGATG...GGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR GCA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGGAATATCTGGGGCATaGTTGGGAGAGAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVSGLDASWGIQCSGCCAGISGA*LGESPP Trigger: TGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCC...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCGAGTTGAAGAAGCACTaGGAGCAGCAGCAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCELKKH*EQQQTW Trigger: CCAAGTCTGCTGCTGCTCCCAGTGCTTCTTCAACTC...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCAGGTTCTTGTCGTCTTaGTTCCCCTTGGCTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCRFLSS*FPLASG Trigger: ACCACTAGCCAAGGGGAATCAAGACGACAAGAACCT...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCCATTATCTACCAGTCTaGGCAGCTTGTTGGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCHYLPV*AACWVW Trigger: CCACACCCAACAAGCTGCTCAGACTGGTAGATAATG...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR GCA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTTTCAGTGGGCAGGCATaGACATCCATGGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SGLDASWGIQCSGCCAATFSGQA*TSMGKS Trigger: AGATTTCCCCATGGATGTGCATGCCTGCCCACTGAA...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR GCA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCTTCAGTGGGCAGGCATaGACATCCATGGGGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCFSGQA*TSMGKS Trigger: AGATTTCCCCATGGATGTGCATGCCTGCCCACTGAA...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCGCTTCCAAACTTCAGTaGGCAGGCATGCACATCCAT | + |
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Preference number: 4 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCASKLQ*AGMHIH Trigger: ATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGC...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTCATCTCCAGGGCCTCTaGTACCTTCTTGCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLDASWGIQCSGCCAATIHLQGL*YLLAFP Trigger: TGGGAAGGCAAGAAGGTACCAGAGGCCCTGGAGATG...AATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| 3UTR CAA 72 bp | GACAACCAGCAGCTAATGATACACCCCTTAGGAGCCTaGCTCAGTGAGTGGGCAGGAAGAATCTGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DNQQLMIHPLGA*LSEWAGRICLW Trigger: CCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCCTAAGGGGTGTATCATTAGCTGCTGGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS-3UTR TCA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATAAGTAGCCTTGGGTaGAGCAATCGCTGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SGLDASWGIQCSGCCAATISSLG*SNRCWS Trigger: ACTCCAACAGCGATTGCTTCACCCAAGGCTACTTAT...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | CGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTAATAAGTAGCCTTGGGTaGAGCAATCGCTGTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RVWMLPGVYSALVAVLPLISSLG*SNRCWS Trigger: ACTCCAACAGCGATTGCTTCACCCAAGGCTACTTAT...TAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | GGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCATGCCCTTGATAGCTaGTTCCCGGTTCACATATGT | + |
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Preference number: 4 (lower is better) Translates to: GFRVWMLPGVYSALVAVLHALDS*FPVHIC Trigger: ACATATGTGAACCGGGAATCAGCTATCAAGGGCATG...CAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTCATGCCCTTGATAGCTaGTTCCCGGTTCACATATGT | + |
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Preference number: 4 (lower is better) Translates to: SGLDASWGIQCSGCCAATHALDS*FPVHIC Trigger: ACATATGTGAACCGGGAATCAGCTATCAAGGGCATG...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | GTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCTTCAGGACCAAAGTGTaGGCTTCCTCCTTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSGLDASWGIQCSGCCAAFRTKV*ASSFSL Trigger: GAGAGAAAAGGAGGAAGCTCACACTTTGGTCCTGAA...GGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS-3UTR GCA 90 bp | GGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTGGAATATCTGGGGCATaGTTGGGAGAGAGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLDASWGIQCSGCCAATIGISGA*LGESPP Trigger: TGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCC...AATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR GCA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCAAGCCGCTGTGAGATaGTTACTTCTCTCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCQAAVR*LLLSSG Trigger: TCCTGAAGAGAGAAGTAAGCATCTCACAGCGGCTTG...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTGTTGTAGGTCTTaGTCTCAGCAGGACTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCHCCRS*SQQDCL Trigger: AAGACAGTCCTGCTGAGACCAAGACCTACAACAGTG...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTTTTTGTCAACCTTGCTaGCACTGTTGTAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GVSGLDASWGIQCSGCCAFCQPC*HCCRSW Trigger: CCAAGACCTACAACAGTGTCAGCAAGGTTGACAAAA...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR TCA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTTTTGTCAACCTTGCTaGCACTGTTGTAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCFCQPC*HCCRSW Trigger: CCAAGACCTACAACAGTGTCAGCAAGGTTGACAAAA...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CCA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTACGTCTTGATTCCCCTTaGCTAGTGGTTCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWMLPGVYSALVAVLPLLRLDSP*LVVPGR Trigger: TCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACG...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCATATCTGGGGCATGCTTaGGAGAGAGTCCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPYLGHA*ERVLQY Trigger: ATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATA...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGGACAGTCATGATACATaGCAAGTAGGTCTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFRVWMLPGVYSALVAVLDSHDT*QVGLDD Trigger: GTCATCCAGACCTACTTGCCATGTATCATGACTGTC...CAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTAGAGTTGAAGAAGCACTaGGAGCAGCAGCAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWMLPGVYSALVAVLPLLELKKH*EQQQTW Trigger: CCAAGTCTGCTGCTGCTCCCAGTGCTTCTTCAACTC...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACACTGTTGTAGGTCTTaGTCTCAGCAGGACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPHCCRS*SQQDCL Trigger: AAGACAGTCCTGCTGAGACCAAGACCTACAACAGTG...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCTGGTACCCACTATGTTaGAGGTGGTGTTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGLDASWGIQCSGCCAAWYPLC*RWCFSL Trigger: CAAAGAAAAACACCACCTTCAACATAGTGGGTACCA...GGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATCGTCTTGATTCCCCTTaGCTAGTGGTTCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGCFLGYTVLWLLCCHYYRLDSP*LVVPGR Trigger: TCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACG...ATAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | CGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTACAGAAGATTGTTCAGTaGAAGGATCTTCATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVWMLPGVYSALVAVLPLQKIVQ*KDLHWS Trigger: GGACCAATGAAGATCCTTCCACTGAACAATCTTCTG...TAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTAGCTTCCAAACTTCAGTaGGCAGGCATGCACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWMLPGVYSALVAVLPLLASKLQ*AGMHIH Trigger: ATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGC...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCAGACAGTCATGATACATaGCAAGTAGGTCTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPDSHDT*QVGLDD Trigger: GTCATCCAGACCTACTTGCCATGTATCATGACTGTC...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTCAGACTTGGAGATGGTaGAGAACTCAGTATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDASWGIQCSGCCAATIQTWRW*RTQYPW Trigger: CCAAGGATACTGAGTTCTCCACCATCTCCAAGTCTG...AATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR TCA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGACCAAGCAAGTCATACTaGTTCAGGCGTGAGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGPSKSY*FRREPS Trigger: GGATGGCTCACGCCTGAATCAGTATGACTTGCTTGG...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR TCA 90 bp | GGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTGAAAGTGGGTTGTCATaGCGACATATTCTCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLDASWGIQCSGCCAATIESGLS*RHILLY Trigger: GTACAGGAGAATATGTCGTCATGACAACCCACTTTC...AATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR TCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCATGGTACCCACTATGTTaGAGGTGGTGTTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPWYPLC*RWCFSL Trigger: CAAAGAAAAACACCACCTTCAACATAGTGGGTACCA...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACAGAAGATTGTTCAGTaGAAGGATCTTCATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPQKIVQ*KDLHWS Trigger: GGACCAATGAAGATCCTTCCACTGAACAATCTTCTG...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| 3UTR CAA 72 bp | GGAGCCTTGCTCAGTGAGTGGGCAGGAAGAATCTGCTaGTGGTGCTATTTGTGGCTTTTACCTTTGACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GALLSEWAGRIC*WCYLWLLPLTL Trigger: TAAGGTCAAAGGTAAAAGCCACAAATAGCACCACAAGCAGATTCTTCCTGCCCACTCACTGAGCAAGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR TCA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGACATTATCTACCAGTCTaGGCAGCTTGTTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGHYLPV*AACWVW Trigger: CCACACCCAACAAGCTGCTCAGACTGGTAGATAATG...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | CAATGGGACTTTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTGAGGGGCTATCTGGGGCATGCTTaGGAGAGAGTCCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: QWDFLEGDIYSGTTFLRGYLGHA*ERVLQY Trigger: ATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATA...GCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTACTTTGTTGGAGCTGCTaGTGTTTTCTTCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VWMLPGVYSALVAVLPLLLCWSC*CFLLHL Trigger: GAGATGAAGAAGAAAACACCAGCAGCTCCAACAAAG...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGACAGACTTGGAGATGGTaGAGAACTCAGTATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGQTWRW*RTQYPW Trigger: CCAAGGATACTGAGTTCTCCACCATCTCCAAGTCTG...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCAAAATTACTTCAGCTTTaGTATAGGCATAGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRVWMLPGVYSALVAVLPKLLQL*YRHSFQ Trigger: TTGGAAGCTATGCCTATACCAAAGCTGAAGTAATTT...TGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGTAGACTGGCATACTAAGATGAGAAACTGGACAAATGGCAGTGTTTGGCTTTGTTGGAGCTGCTaGTGTTTTCTTCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGVDWHTKMRNWTNGSVWLCWSC*CFLLHL Trigger: GAGATGAAGAAGAAAACACCAGCAGCTCCAACAAAG...CCAAACACTGCCATTTGTCCAGTTTCTCATCTTAGTATGCCAGTCTACCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | TCTATGACTCTACAATTCACACCTCATTACAACTGGCATCCAAATCAGGTAAGGATCGTCAGGAATATCTaGGGCATGCTTGGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMTLQFTPHYNWHPNQVRIVRNI*GMLGRE Trigger: CTCTCTCCCAAGCATGCCCCAGATATTCCTGACGAT...CCTTACCTGATTTGGATGCCAGTTGTAATGAGGTGTGAATTGTAGAGTCATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATGGAAGGATCTTCATTaGTCCATCAAATTTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWMLPGVYSALVAVLPLLWKDLH*SIKFQS Trigger: AGACTGAAATTTGATGGACCAATGAAGATCCTTCCA...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| 3UTR CAA 72 bp | CAATTGTCCCCCACTGACCTCCAAGGCAAGAAACTATaGGTTACTTCAGAAGTTTCCATAGACTTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLSPTDLQGKKL*VTSEVSIDFFP Trigger: TGGGAAGAAGTCTATGGAAACTTCTGAAGTAACCAATAGTTTCTTGCCTTGGAGGTCAGTGGGGGACAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR TCA 90 bp | TCCAAAGTGGCTGAGGCTGTTATACTAAACAATCTCACTCCTTTGAGCCATTACGAAAGTGGGTTGTCATaGCGACATATTCTCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKVAEAVILNNLTPLSHYESGLS*RHILLY Trigger: GTACAGGAGAATATGTCGTCATGACAACCCACTTTC...GTAATGGCTCAAAGGAGTGAGATTGTTTAGTATAACAGCCTCAGCCACTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | TTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATTGGAAGGATCTTCATTaGTCCATCAAATTTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGCFLGYTVLWLLCCHYYWKDLH*SIKFQS Trigger: AGACTGAAATTTGATGGACCAATGAAGATCCTTCCA...ATAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR TCA 90 bp | ATAAGCAATACTCAACTGGCTATAAAGGGCTCAATATTATTGAAGCAATGGGACAGGTTCTTGTCGTCTTaGTTCCCCTTGGCTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISNTQLAIKGSILLKQWDRFLSS*FPLASG Trigger: ACCACTAGCCAAGGGGAATCAAGACGACAAGAACCT...GTCCCATTGCTTCAATAATATTGAGCCCTTTATAGCCAGTTGAGTATTGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCCCACTGACCTCCAAGGCAAGAAACTATTGGTTACTTCAGAAGTTTCCAAATTACTTCAGCTTTaGTATAGGCATAGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPTDLQGKKLLVTSEVSKLLQL*YRHSFQ Trigger: TTGGAAGCTATGCCTATACCAAAGCTGAAGTAATTT...GGAAACTTCTGAAGTAACCAATAGTTTCTTGCCTTGGAGGTCAGTGGGGGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
||
| CDS-3UTR CAA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGGAGCAGCAGCAGACTaGGAGATGGTGGAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSGLDASWGIQCSGCCAGAAAD*EMVENS Trigger: TGAGTTCTCCACCATCTCCAAGTCTGCTGCTGCTCC...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTGGAGCAGCAGCAGACTaGGAGATGGTGGAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLDASWGIQCSGCCAATGAAAD*EMVENS Trigger: TGAGTTCTCCACCATCTCCAAGTCTGCTGCTGCTCC...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTCAATCGCTGTTGGAGTaGAAGAAGCACTGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLDASWGIQCSGCCAATQSLLE*KKHWEQ Trigger: CTGCTCCCAGTGCTTCTTCAACTCCAACAGCGATTG...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCCAATCGCTGTTGGAGTaGAAGAAGCACTGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCQSLLE*KKHWEQ Trigger: CTGCTCCCAGTGCTTCTTCAACTCCAACAGCGATTG...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCTCAGCAGGACTGTCTaGCACATAAGTAGCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCLSRTV*HISSLG Trigger: CCCAAGGCTACTTATGTGCAAGACAGTCCTGCTGAG...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCTTGCGGATCATGCCCTaGATAGCTGATTCCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCLRIMP*IADSRF Trigger: GAACCGGGAATCAGCTATCAAGGGCATGATCCGCAA...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTATATCTGGGGCATGCTaGGGAGAGAGTCCTCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: GVSGLDASWGIQCSGCCAISGAC*GESPPI Trigger: TATTGGAGGACTCTCTCCCAAGCATGCCCCAGATAT...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGGTGAAGCAATCGCTGTaGGAGTTGAAGAAGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFRVWMLPGVYSALVAVLVKQSL*ELKKHW Trigger: CCAGTGCTTCTTCAACTCCAACAGCGATTGCTTCAC...CAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATCTCAGCAGGACTGTCTaGCACATAAGTAGCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFGCFLGYTVLWLLCCHYLSRTV*HISSLG Trigger: CCCAAGGCTACTTATGTGCAAGACAGTCCTGCTGAG...ATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCGAGTCCTCCAATATCTaGTTTCACAAAGTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGFGFGCFLGYTVLWLLCESSNI*FHKVPR Trigger: CCTGGGGACTTTGTGAAACAAGATATTGGAGGACTC...GCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATACCAGTCTGAGCAGCTaGTTGGGTGTGGTCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: GFGCFLGYTVLWLLCCHYTSLSS*LGVVIL Trigger: CAATATGACCACACCCAACAAGCTGCTCAGACTGGT...ATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTATGATGCGGGAAATTTaGTCAACCTTGCTGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: GVSGLDASWGIQCSGCCAMMREI*STLLTL Trigger: CAGTGTCAGCAAGGTTGACAAAATTTCCCGCATCAT...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATTGCGGATCATGCCCTaGATAGCTGATTCCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VWMLPGVYSALVAVLPLLLRIMP*IADSRF Trigger: GAACCGGGAATCAGCTATCAAGGGCATGATCCGCAA...TAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTGTGGAAGGATCTTCATaGGTCCATCAAATTTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGLDASWGIQCSGCCAATVEGSS*VHQISV Trigger: GACTGAAATTTGATGGACCAATGAAGATCCTTCCAC...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | TCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTTTACTAGCCAGAAGATaGTTCAGTGGAAGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGLDASWGIQCSGCCAATLLARR*FSGRIF Trigger: GAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAA...AGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGTATTGTTAACCTCATaGTATAGAGGAGGGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVSGLDASWGIQCSGCCAVLLTS*YRGGSH Trigger: ATGGGACCCTCCTCTATACAATGAGGTTAACAATAC...AGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCTGGTGTTTTTCTTTGTaGGAGCTGCTGGTGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCWCFSL*ELLVFS Trigger: AGAAAACACCAGCAGCTCCAACAAAGAAAAACACCA...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | TTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTGGTGTTTTTCTTTGTaGGAGCTGCTGGTGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FGFGCFLGYTVLWLLCCHWCFSL*ELLVFS Trigger: AGAAAACACCAGCAGCTCCAACAAAGAAAAACACCA...GTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | GTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCGTGGTACCCACTATGTaGAAGGTGGTGTTTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VSGLDASWGIQCSGCCAAVVPTM*KVVFFF Trigger: AAAGAAAAACACCACCTTCAACATAGTGGGTACCAC...GGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | GGTTTCGGGTTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCTTCTTAGACAGCAACTaGAAGAGACCTGTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: GFGFGCFLGYTVLWLLCCFLDSN*KRPVRS Trigger: AGATCTCACAGGTCTCTTCAAGTTGCTGTCTAAGAA...GCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAACCCGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS TCA 90 bp | CTCTGTCCCAACAACATGGCCAAGCAAGTCATACTGATTCAGGCGTaGGCCATCCTGTGCTACTTCCACAGATTTGTTCTTCCCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LCPNNMAKQVILIQA*AILCYFHRFVLPKS Trigger: ACTCTTGGGAAGAACAAATCTGTGGAAGTAGCACAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGCCATGTTGTTGGGACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS TCA 90 bp | GACCGGATTATCTCTGTCCCAACAACATGGCCAAGCAAGTCATACTaGTTCAGGCGTGAGCCATCCTGTGCTACTTCCACAGATTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: DRIISVPTTWPSKSY*FRREPSCATSTDLF Trigger: GAACAAATCTGTGGAAGTAGCACAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGCCATGTTGTTGGGACAGAGATAATCCGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | TTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATATATCTGGGGCATGCTaGGGAGAGAGTCCTCCAATA | + |
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Preference number: 5 (lower is better) Translates to: FGCFLGYTVLWLLCCHYYISGAC*GESPPI Trigger: TATTGGAGGACTCTCTCCCAAGCATGCCCCAGATAT...ATAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CCA 90 bp | AGGATAGGTGGTACCCACTATGTTGAAGGTGGTGTTTTTCTTTGTTaGAGCTGCTGGTGTTTTCTTCTTCATCTCCAGGGCCTCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: RIGGTHYVEGGVFLC*SCWCFLLHLQGLWY Trigger: GTACCAGAGGCCCTGGAGATGAAGAAGAAAACACCAGCAGCTCCAACAAAGAAAAACACCACCTTCAACATAGTGGGTACCACCTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | GCTGGGGTAGACTGGCATACTAAGATGAGAAACTGGACAAATGGCAGTGTTTGGGAGTCCTCCAATATCTaGTTTCACAAAGTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGVDWHTKMRNWTNGSVWESSNI*FHKVPR Trigger: CCTGGGGACTTTGTGAAACAAGATATTGGAGGACTC...CCAAACACTGCCATTTGTCCAGTTTCTCATCTTAGTATGCCAGTCTACCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS-3UTR CAA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGAACCAGTCTGAGCAGCTaGTTGGGTGTGGTCATATTG | + |
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Preference number: 5 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGTSLSS*LGVVIL Trigger: CAATATGACCACACCCAACAAGCTGCTCAGACTGGT...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS-3UTR CAA 90 bp | CAATGGGACTTTCTTGAAGGAGACATATATTCAGGCACTACTTTCCTGAGGGGCGTGAAGCAATCGCTGTaGGAGTTGAAGAAGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: QWDFLEGDIYSGTTFLRGVKQSL*ELKKHW Trigger: CCAGTGCTTCTTCAACTCCAACAGCGATTGCTTCAC...GCCCCTCAGGAAAGTAGTGCCTGAATATATGTCTCCTTCAAGAAAGTCCCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS TCA 90 bp | TCCTCCAATATCTTGTTTCACAAAGTCCCCAGGTTCTTGTCGTCTTaGTTCCCCTTGGCTAGTGGTTCCAGGGAGAATACTAATCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSNILFHKVPRFLSS*FPLASGSRENTNQE Trigger: CTCCTGATTAGTATTCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGTGAAACAAGATATTGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | GCTGGGGTAGACTGGCATACTAAGATGAGAAACTGGACAAATGGCAGTGTTTGGATGATGCGGGAAATTTaGTCAACCTTGCTGACACTG | + |
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Preference number: 5 (lower is better) Translates to: AGVDWHTKMRNWTNGSVWMMREI*STLLTL Trigger: CAGTGTCAGCAAGGTTGACAAAATTTCCCGCATCAT...CCAAACACTGCCATTTGTCCAGTTTCTCATCTTAGTATGCCAGTCTACCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS CCA 90 bp | TCTTGTTTCACAAAGTCCCCAGGTTCTTGTCGTCTTGATTCCCCTTaGCTAGTGGTTCCAGGGAGAATACTAATCAGGAGAAGAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SCFTKSPGSCRLDSP*LVVPGRILIRRRST Trigger: TGTACTTCTTCTCCTGATTAGTATTCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGTGAAACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | TTTGGATGCTTCCTGGGGTATACAGTGCTCTGGTTGCTGTGCTGCCACTATTATGTGGTACCCACTATGTaGAAGGTGGTGTTTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FGCFLGYTVLWLLCCHYYVVPTM*KVVFFF Trigger: AAAGAAAAACACCACCTTCAACATAGTGGGTACCAC...ATAATAGTGGCAGCACAGCAACCAGAGCACTGTATACCCCAGGAAGCATCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | CTTAAGAATAATGGGACTGGCATGCATTATCCCAACAATGGCAGGAAGCAGGGATTACTAGCCAGAAGATaGTTCAGTGGAAGGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LKNNGTGMHYPNNGRKQGLLARR*FSGRIF Trigger: GAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAA...TCCCTGCTTCCTGCCATTGTTGGGATAATGCATGCCAGTCCCATTATTCTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS CCA 90 bp | TCTAGTGAAGATAGTGATATTATCTGTACTATCGTCAGGAATATCTaGGGCATGCTTGGGAGAGAGTCCTCCAATATCTTGTTTCACAAA | + |
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Preference number: 5 (lower is better) Translates to: SSEDSDIICTIVRNI*GMLGRESSNILFHK Trigger: TTTGTGAAACAAGATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAATATCACTATCTTCACTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CCA 90 bp | GAAGGTATCAGGAGTCCATATCTTACTAGCCAGAAGATTGTTCAGTaGAAGGATCTTCATTGGTCCATCAAATTTCAGTCTTTCATCATG | + |
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Preference number: 5 (lower is better) Translates to: EGIRSPYLTSQKIVQ*KDLHWSIKFQSFIM Trigger: CATGATGAAAGACTGAAATTTGATGGACCAATGAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAAGATATGGACTCCTGATACCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CCA 90 bp | CCATATCTTACTAGCCAGAAGATTGTTCAGTGGAAGGATCTTCATTaGTCCATCAAATTTCAGTCTTTCATCATGCCATGTCTGTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: PYLTSQKIVQWKDLH*SIKFQSFIMPCLSK Trigger: TTTAGACAGACATGGCATGATGAAAGACTGAAATTTGATGGACCAATGAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAAGATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS-3UTR CAA 90 bp | ATAAGCAATACTCAACTGGCTATAAAGGGCTCAATATTATTGAAGCAATGGGACGTATTGTTAACCTCATaGTATAGAGGAGGGTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ISNTQLAIKGSILLKQWDVLLTS*YRGGSH Trigger: ATGGGACCCTCCTCTATACAATGAGGTTAACAATAC...GTCCCATTGCTTCAATAATATTGAGCCCTTTATAGCCAGTTGAGTATTGCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055966.13 |
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| CDS CAA 90 bp | GCAATCGCTGTTGGAGTTGAAGAAGCACTGGGAGCAGCAGCAGACTaGGAGATGGTGGAGAACTCAGTATCCTTGGCCAGATTGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: AIAVGVEEALGAAAD*EMVENSVSLARLIG Trigger: TCCTATCAATCTGGCCAAGGATACTGAGTTCTCCACCATCTCCAAGTCTGCTGCTGCTCCCAGTGCTTCTTCAACTCCAACAGCGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS TCA 72 bp | ATCTCTGTCCCAACAACATGGCCAAGCAAGTCATACTaGTTCAGGCGTGAGCCATCCTGTGCTACTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISVPTTWPSKSY*FRREPSCATST Trigger: TGTGGAAGTAGCACAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGCCATGTTGTTGGGACAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CCA 72 bp | ACAAAGTCCCCAGGTTCTTGTCGTCTTGATTCCCCTTaGCTAGTGGTTCCAGGGAGAATACTAATCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TKSPGSCRLDSP*LVVPGRILIRR Trigger: TCTCCTGATTAGTATTCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS TCA 72 bp | ATCTTGTTTCACAAAGTCCCCAGGTTCTTGTCGTCTTaGTTCCCCTTGGCTAGTGGTTCCAGGGAGAATACT | + |
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Preference number: 6 (lower is better) Translates to: ILFHKVPRFLSS*FPLASGSRENT Trigger: AGTATTCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGTGAAACAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS GCA 72 bp | AGACCTGTGAGATCTACAGTACAAGCCGCTGTGAGATaGTTACTTCTCTCTTCAGGACCAAAGTGTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RPVRSTVQAAVR*LLLSSGPKCEL Trigger: AAGCTCACACTTTGGTCCTGAAGAGAGAAGTAAGCATCTCACAGCGGCTTGTACTGTAGATCTCACAGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS CCA 72 bp | TTCAGCTTTGGTATAGGCATAGCTTCCAAACTTCAGTaGGCAGGCATGCACATCCATGGGGAAATCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FSFGIGIASKLQ*AGMHIHGEIFQ Trigger: TTGGAAGATTTCCCCATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGCTATGCCTATACCAAAGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS TCA 72 bp | AACAACATGGCCAAGCAAGTCATACTGATTCAGGCGTaGGCCATCCTGTGCTACTTCCACAGATTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NNMAKQVILIQA*AILCYFHRFVL Trigger: AAGAACAAATCTGTGGAAGTAGCACAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGCCATGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CAA 90 bp | ATAGTGATATTATCTGTACTATCGTCAGGAATATCTGGGGCATGCTaGGGAGAGAGTCCTCCAATATCTTGTTTCACAAAGTCCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IVILSVLSSGISGAC*GESPPISCFTKSPG Trigger: ACCTGGGGACTTTGTGAAACAAGATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAATATCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CCA 72 bp | GATAGTGATATTATCTGTACTATCGTCAGGAATATCTaGGGCATGCTTGGGAGAGAGTCCTCCAATATCTTG | + |
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Preference number: 6 (lower is better) Translates to: DSDIICTIVRNI*GMLGRESSNIL Trigger: CAAGATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAATATCACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CAA 72 bp | TTATCTGTACTATCGTCAGGAATATCTGGGGCATGCTaGGGAGAGAGTCCTCCAATATCTTGTTTCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSVLSSGISGAC*GESPPISCFTK Trigger: CTTTGTGAAACAAGATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CAA 72 bp | CACATTTGTGTGATTATCATCTTCTTAGACAGCAACTaGAAGAGACCTGTGAGATCTACAGTACAAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: HICVIIIFLDSN*KRPVRSTVQAA Trigger: AGCGGCTTGTACTGTAGATCTCACAGGTCTCTTCAAGTTGCTGTCTAAGAAGATGATAATCACACAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS CCA 72 bp | ACTAGCCAGAAGATTGTTCAGTGGAAGGATCTTCATTaGTCCATCAAATTTCAGTCTTTCATCATGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: TSQKIVQWKDLH*SIKFQSFIMPC Trigger: ACATGGCATGATGAAAGACTGAAATTTGATGGACCAATGAAGATCCTTCCACTGAACAATCTTCTGGCTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CAA 72 bp | AAGGTATCAGGAGTCCATATCTTACTAGCCAGAAGATaGTTCAGTGGAAGGATCTTCATTGGTCCATCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KVSGVHILLARR*FSGRIFIGPSN Trigger: ATTTGATGGACCAATGAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAAGATATGGACTCCTGATACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055966.13 ENSMUST00000114554.3 |
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| CDS CAA 90 bp | AATCAGGAGAAGAAGTACAACTCTGGTCACATAAAAGTGCCACATTaGTGTGATTATCATCTTCTTAGACAGCAACTTGAAGAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: NQEKKYNSGHIKVPH*CDYHLLRQQLEETC Trigger: ACAGGTCTCTTCAAGTTGCTGTCTAAGAAGATGATAATCACACAAATGTGGCACTTTTATGTGACCAGAGTTGTACTTCTTCTCCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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| CDS CAA 72 bp | AAGAAGTACAACTCTGGTCACATAAAAGTGCCACATTaGTGTGATTATCATCTTCTTAGACAGCAACTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KKYNSGHIKVPH*CDYHLLRQQLE Trigger: TTCAAGTTGCTGTCTAAGAAGATGATAATCACACAAATGTGGCACTTTTATGTGACCAGAGTTGTACTTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114554.3 |
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