Pregenerated sensors for GABRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000560Ensembl transcript IDs: ENSMUST00000000572.7, ENSMUST00000197284.5, ENSMUST00000198625.5
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCTTCCCAATTGACTGGCCCAGCAAATCATACTGATTTAACCTaGAGCCATCGGGAGCAACCTGAACGGAGTCAGAAGCATTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: FPSQLTGPANHTDLT*SHREQPERSQKHCK Trigger: CTTACAATGCTTCTGACTCCGTTCAGGTTGCTCCCGATGGCTCCAGGTTAAATCAGTATGATTTGCTGGGCCAGTCAATTGGGAAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR TCA 90 bp | GGCAATGGCTCTTTTGGCACGGGATGTTTTCTGCCTGTATTTCCATaGGTTAGCAAATGCAGGTCTCCTTTAGAGGTCTACTGTAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: GNGSFGTGCFLPVFP*VSKCRSPLEVYCKL Trigger: GAGCTTACAGTAGACCTCTAAAGGAGACCTGCATTTGCTAACTCATGGAAATACAGGCAGAAAACATCCCGTGCCAAAAGAGCCATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR TCA 90 bp | GACCATGAGAAAGCATCAGACATGGACCATATGACCTTAGTTCCTTaGAGTGTGGCCTTTGGTGAGTTGGTTGTAATAGAATGCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: DHEKASDMDHMTLVP*SVAFGELVVIECLH Trigger: GTGAAGGCATTCTATTACAACCAACTCACCAAAGGCCACACTTCAAGGAACTAAGGTCATATGGTCCATGTCTGATGCTTTCTCATGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR TCA 90 bp | AGACATGGACCATATGACCTTAGTTCCTTGAAGTGTGGCCTTTGGTaGGTTGGTTGTAATAGAATGCCTTCACCTTTTATTAAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: RHGPYDLSSLKCGLW*VGCNRMPSPFIKGT Trigger: AGTCCCTTTAATAAAAGGTGAAGGCATTCTATTACAACCAACTCACCAAAGGCCACACTTCAAGGAACTAAGGTCATATGGTCCATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR TCA 90 bp | AAGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTaGCAACACATACCTGGAAAGTCCATATATCATCATCATCATCAT | + |
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Preference number: 1 (lower is better) Translates to: KMAAFFLSPAPEKFS*QHIPGKSIYHHHHH Trigger: ATGATGATGATGATGATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR TCA 90 bp | GTTTTAAGGTCAAGGTTGTCTTCAGAGCGAATTCTGTTAGTAGGATaGAGCTGTGACCCTGGTATGAGTACAAATCATGCAAAAACACAC | + |
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Preference number: 1 (lower is better) Translates to: VLRSRLSSERILLVG*SCDPGMSTNHAKTH Trigger: GTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACAGCTTCATCCTACTAACAGAATTCGCTCTGAAGACAACCTTGACCTTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR TCA 90 bp | TTGCTGAGAGTTTGTTTCCAGAAGGTGCTCCTTTTATTGATGTTGTaGACAGACCTGGTTTGCACTCTACTCAAATACTGTACAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: LLRVCFQKVLLLLML*TDLVCTLLKYCTKL Trigger: CAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTTCACAACATCAATAAAAGGAGCACCTTCTGGAAACAAACTCTCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR CAA 90 bp | GGCTTGTTCTCTGGCTTCTTGTTCGGTTCTGGCGTCGTTGCACTTTaGGAAATGGTAGAGAGGACAGGATCTTTGGAAAGATTCGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLFSGFLFGSGVVAL*EMVERTGSLERFGA Trigger: TGCCCCGAATCTTTCCAAAGATCCTGTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCAGAGAACAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGGGGAAATCCTCCAGGTaGATGGGACATTCGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWGKSSR*MGHSAW Trigger: CCAAGCCGAATGTCCCATGCACCTGGAGGATTTCCC...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAACCATCGGGAGCAACCTaGACGGAGTCAGAAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKPSGAT*TESEAL Trigger: CAATGCTTCTGACTCCGTTCAGGTTGCTCCCGATGG...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGATCTTTGGAAAGATTCGGGGCATAGTTGGCAACAGCTACCGCATAGGTCGAAGCAGCTTGTTTaGCATTGTCATGTTATGGGC | + |
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Preference number: 2 (lower is better) Translates to: GQDLWKDSGHSWQQLPHRSKQLV*HCHVMG Trigger: GCCCATAACATGACAATGCCAAACAAGCTGCTTCGA...CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGATCTTTGGAAAGATTCGGGGCATAGTTGGCAACAGCTACCGCATAGGTTGCATGGCTTAAGCTaGACCATGAGAAAGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: GQDLWKDSGHSWQQLPHRLHGLS*TMRKHQ Trigger: CTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAA...CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCAGATTCGGGGCATAGTTaGCAACAGCTACCGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: VCVKLPMTLAGVLNTPKADSGHS*QQLPHR Trigger: CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATC...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATGATTCGGGGCATAGTTaGCAACAGCTACCGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: PFSSTRKVQLTTHTWKVHDSGHS*QQLPHR Trigger: CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATC...ATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACAAAAATTAGCGGCTTCTaGGCCCTGATGAGAAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: RWQLSSFLQHQKSSADNTKISGF*ALMRSL Trigger: AAGGCTTCTCATCAGGGCTCAGAAGCCGCTAATTTT...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAACGTCTGGGCAACATTCACAATGGAGAGCAGCTTACCATTTGCCTTCACTTCTGTACCCATCCTaGGCCTATTCACAAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: FLTSGQHSQWRAAYHLPSLLYPS*AYSQEP Trigger: AGGCTCTTGTGAATAGGCTCAGGATGGGTACAGAAG...TGAAGGCAAATGGTAAGCTGCTCTCCATTGTGAATGTTGCCCAGACGTTAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
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| 3UTR-3UTR TCA 90 bp | AACAGACCTGGTTTGCACTCTACTCAAATACTGTACAAAACTGCAAGAAACGCCTGTGCTGTTATCCTCTaGGCTCTCTCTGCCACCCTA | + |
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Preference number: 2 (lower is better) Translates to: NRPGLHSTQILYKTARNACAVIL*ALSATL Trigger: TAGGGTGGCAGAGAGAGCTCAGAGGATAACAGCACA...GGCGTTTCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCTTCTTCAAGTATTGTAATGGTTTTGCATGGCTTAAGCTGGACCATGAGGGGAAATCCTCCAGGTaGATGGGACATTCGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ICFFKYCNGFAWLKLDHEGKSSR*MGHSAW Trigger: CCAAGCCGAATGTCCCATGCACCTGGAGGATTTCCC...CTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACACGGTTCTGGCGTCGTTaGACTTTTGGAAATGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RWQLSSFLQHQKSSADNTRFWRR*TFGNGR Trigger: TCTACCATTTCCAAAAGTGCAACGACGCCAGAACCG...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGGTGCTCCTCTGTACCTaGGACACCTATGAATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWVLLCT*DTYEFS Trigger: TGAGAATTCATAGGTGTCCCAGGTACAGAGGAGCAC...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCAGTGCTCCTCTGTACCTaGGACACCTATGAATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VCVKLPMTLAGVLNTPKAVLLCT*DTYEFS Trigger: TGAGAATTCATAGGTGTCCCAGGTACAGAGGAGCAC...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGATCTTTGGAAAGATTCGGGGCATAGTTGGCAACAGCTACCGCATAGGAAGTCCAAATATATGTaGCTTCTGAGGTTGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: GQDLWKDSGHSWQQLPHRKSKYM*LLRLCK Trigger: CTTACACAACCTCAGAAGTCACATATATTTGGACTT...CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGCCAGAAAAGTTCAGCTaGCAACACATACCTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWPEKFS*QHIPGK Trigger: CTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGG...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCACCAGACAGAAAAATGTaGCAACTAACTGCCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VCVKLPMTLAGVLNTPKAPDRKM*QLTALS Trigger: GGAAAGGGCAGTTAGTTGGCACATTTTTCTGTCTGG...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGCCATTTCAGCCAAGATaGCAGCTTTCTTCCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWPFQPR*QLSSFL Trigger: GAGAAAGGAAGAAAGCTGCCATCTTGGCTGAAATGG...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAATGTTTCCTTCCCAATTaGCTGGCCCAGCAAATCATA | + |
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Preference number: 2 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKCFLPN*LAQQII Trigger: TATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACA...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACACCCATCCTCTTTTTGTaGAGTAATTCACGGTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RWQLSSFLQHQKSSADNTPILFL*SNSRLQ Trigger: TTGCAACCGTGAATTACTTCACAAAAAGAGGATGGG...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCTTCCAATGACACTACATACTGATTTAACCTaGAGCCATCGGGAGCAACCT | + |
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Preference number: 2 (lower is better) Translates to: WFHISSFLLVCVKLPMTLHTDLT*SHREQP Trigger: AGGTTGCTCCCGATGGCTCCAGGTTAAATCAGTATG...TAGTGTCATTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATATATCCATGTTATGGGCCACTaGCTTTTTCCCATTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQHQKSSADNTYLESPYIHVMGH*LFPIVK Trigger: TTTCACAATGGGAAAAAGTCAGTGGCCCATAACATG...GATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | AACAGACCTGGTTTGCACTCTACTCAAATACTGTACAAAACTGCAAGAAACGCCTGTTTCCTTCCCAATTaGCTGGCCCAGCAAATCATA | + |
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Preference number: 2 (lower is better) Translates to: NRPGLHSTQILYKTARNACFLPN*LAQQII Trigger: TATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACA...GGCGTTTCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGATAAGTGAACTTCACTaGACTCCATTTCAGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWISELH*TPFQPR Trigger: TCTTGGCTGAAATGGAGTGCAGTGAAGTTCACTTAT...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR GCA 90 bp | AACAGACCTGGTTTGCACTCTACTCAAATACTGTACAAAACTGCAAGAAACGCCCCAGACAGAAAAATGTaGCAACTAACTGCCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: NRPGLHSTQILYKTARNAPDRKM*QLTALS Trigger: GGAAAGGGCAGTTAGTTGGCACATTTTTCTGTCTGG...GGCGTTTCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTGTACCTGGGACACCTATGAATTCTCATTCTTGGAGTTTTTGGCACAGAATGTTCCATCATCCTaGATTCGAAGCAGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LLCTWDTYEFSFLEFLAQNVPSS*IRSSLF Trigger: AAACAAGCTGCTTCGAATCCAGGATGATGGAACATT...CTGTGCCAAAAACTCCAAGAATGAGAATTCATAGGTGTCCCAGGTACAGAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAATGTAATGGTTTTGCATaGCTTAAGCTGGACCATGAG | + |
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Preference number: 2 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKCNGFA*LKLDHE Trigger: CTCATGGTCCAGCTTAAGCCATGCAAAACCATTACA...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAACCAGGCCAGAGGTTTaGCTGTTTCATATATTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKTRPEV*LFHIFE Trigger: CTCAAATATATGAAACAGCCAAACCTCTGGCCTGGT...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGTGTTGTGAACAGACCTaGTTTGCACTCTACTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWCCEQT*FALYSN Trigger: ATTTGAGTAGAGTGCAAACCAGGTCTGTTCACAACA...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR CAA 90 bp | TGGAGGTTTAATAGTCCATCTGCTTCTTCAAGTATTGTAATGGTTTaGCATGGCTTAAGCTGGACCATGAGAAAGCATCAGACATGGACC | + |
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Preference number: 2 (lower is better) Translates to: WRFNSPSASSSIVMV*HGLSWTMRKHQTWT Trigger: GGTCCATGTCTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGATGGACTATTAAACCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR CAA 90 bp | TTTCCAGAAGGTGCTCCTTTTATTGATGTTGTGAACAGACCTGGTTaGCACTCTACTCAAATACTGTACAAAACTGCAAGAAACGCCACG | + |
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Preference number: 2 (lower is better) Translates to: FPEGAPFIDVVNRPG*HSTQILYKTARNAT Trigger: CGTGGCGTTTCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTTCACAACATCAATAAAAGGAGCACCTTCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCTTCCAATGACACTACATGTTATGGGCCACTaGCTTTTTCCCATTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: WFHISSFLLVCVKLPMTLHVMGH*LFPIVK Trigger: TTTCACAATGGGAAAAAGTCAGTGGCCCATAACATG...TAGTGTCATTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | CCAAAATACAAAATATCCACAGAGCTTTGGAGAAGTTCTACCCAGCAGCTGATGTACCTGGGACACCTATaGATTCTCATTCTTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PKYKISTELWRSSTQQLMYLGHL*ILILGV Trigger: AACTCCAAGAATGAGAATTCATAGGTGTCCCAGGTA...CATCAGCTGCTGGGTAGAACTTCTCCAAAGCTCTGTGGATATTTTGTATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACAAATACTGTACAAAACTaGAAGAAACGCCACGATTTG | + |
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Preference number: 2 (lower is better) Translates to: RWQLSSFLQHQKSSADNTNTVQN*KKRHDL Trigger: CAAATCGTGGCGTTTCTTGCAGTTTTGTACAGTATT...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACAAAGGGACTTGTCATTaGCTACACTCTTCCCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VGHKLAVISQTVQSKNQNKGTCH*LHSSRP Trigger: GGGACGGGAAGAGTGTAGTCAATGACAAGTCCCTTT...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR-3UTR TCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGATGACCTTAGTTCCTTaGAGTGTGGCCTTTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSMTLVP*SVAFGE Trigger: CTCACCAAAGGCCACACTTCAAGGAACTAAGGTCAT...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
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| 3UTR-3UTR GCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGCGGTTCTGGCGTCGTTaGACTTTTGGAAATGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSRFWRR*TFGNGR Trigger: TCTACCATTTCCAAAAGTGCAACGACGCCAGAACCG...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCTGTTATCCTCTGAGCTCTCTCTGCCACCCTAAACTGTTCTTAACGTCTATGAATTCTCATTCTTaGAGTTTTTGGCACAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: MCCYPLSSLCHPKLFLTSMNSHS*SFWHSF Trigger: AAAGCTGTGCCAAAAACTCCAAGAATGAGAATTCAT...AGACGTTAAGAACAGTTTAGGGTGGCAGAGAGAGCTCAGAGGATAACAGCACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGTCCAAACACAGTTCTTaGTGGCACCGATTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSSKHSS*WHRFSV Trigger: AACAGAGAATCGGTGCCAGCAAGAACTGTGTTTGGA...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGTCGAAGCAGCTTGTTTaGCATTGTCATGTTATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSSKQLV*HCHVMG Trigger: GCCCATAACATGACAATGCCAAACAAGCTGCTTCGA...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACCCTGGTATGAGTACAAATCATGCAAAAACACACAGTGAAATCATACTTTTTCTTGGCTTCAGCTaGCTTGTTCTCTGGCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CDPGMSTNHAKTHSEIILFLGFS*LVLWLL Trigger: AAGAAGCCAGAGAACAAGCCAGCTGAAGCCAAGAAA...AAGTATGATTTCACTGTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
||
| 3UTR-3UTR TCA 90 bp | TACATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCGACTTTTTCCCATTGTaGAAGAAGGTATCAGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: YIVIKHWFHISSFLLVCVDFFPL*KKVSGV Trigger: GACTCCTGATACCTTCTTTCACAATGGGAAAAAGTC...GACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGGACTTTTTCCCATTGTaGAAGAAGGTATCAGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSDFFPL*KKVSGV Trigger: GACTCCTGATACCTTCTTTCACAATGGGAAAAAGTC...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCCCATCCTCTTTTTGTaGAGTAATTCACGGTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: IVIKHWFHISSFLLVCVKPILFL*SNSRLQ Trigger: TTGCAACCGTGAATTACTTCACAAAAAGAGGATGGG...CTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTGACCCTGGTATGAGTACAAATCATGCAAAAACACACAGTGAAATCATACTTGCACGGGATGTTTTCTaGCTGTATTTCCATGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: CDPGMSTNHAKTHSEIILARDVF*LYFHEL Trigger: TAACTCATGGAAATACAGGCAGAAAACATCCCGTGC...AAGTATGATTTCACTGTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACCGTTGTTCTGTATCATaGCGGAGCCTTTCTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VGHKLAVISQTVQSKNQNRCSVS*RSLSLF Trigger: AAAAAGAGAAAGGCTCCGTCATGATACAGAACAACG...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAATTAAAAGTACCAAACAGAACTGGGAACACTATTCTAGACATCCTGTCGAATGTTCCATCATCCTaGATTCGAAGCAGCTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TKLKVPNRTGNTILDILSNVPSS*IRSSLF Trigger: AAACAAGCTGCTTCGAATCCAGGATGATGGAACATT...CGACAGGATGTCTAGAATAGTGTTCCCAGTTCTGTTTGGTACTTTTAATTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | ACCCAGCAGCTGATGCAGACACCAACAGCCAAACAGTaGGTGGAGCTTGGGGACTCATGGAAGGATAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQQLMQTPTAKQ*VELGDSWKDRR Trigger: CCTCCTATCCTTCCATGAGTCCCCAAGCTCCACCCACTGTTTGGCTGTTGGTGTCTGCATCAGCTGCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR CCA 72 bp | CCAACAGCCAAACAGTGGGTGGAGCTTGGGGACTCATaGAAGGATAGGAGGAAGGATTGTAAGCCCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTAKQWVELGDS*KDRRKDCKPQR Trigger: CCTTTGGGGCTTACAATCCTTCCTCCTATCCTTCCATGAGTCCCCAAGCTCCACCCACTGTTTGGCTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTCTTGTTCGGTTCTGGCGTCGTTGCACTTTTGGAAATGGTAGAGAGGACGCAGCTTGTTTGGCATaGTCATGTTATGGGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: WLLVRFWRRCTFGNGREDAACLA*SCYGPL Trigger: CAGTGGCCCATAACATGACAATGCCAAACAAGCTGC...GTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | TTCAGCTGGCTTGTTCTCTGGCTTCTTGTTCGGTTCTaGCGTCGTTGCACTTTTGGAAATGGTAGAGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSWLVLWLLVRF*RRCTFGNGRED Trigger: GTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCAGAGAACAAGCCAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGGATCTTTGGAAAGATTCGGGGCATAGTTGGCAACAGCTACCGCATAGGGTGGCCTTTGGTGAGTaGGTTGTAATAGAATGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GQDLWKDSGHSWQQLPHRVAFGE*VVIECL Trigger: AAGGCATTCTATTACAACCAACTCACCAAAGGCCAC...CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR CCA 72 bp | ATCGGGAAATCCTCCAGGTGCATGGGACATTCGGCTTaGACTGTAAGCCTCATGGTATATAGCAATGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IGKSSRCMGHSA*TVSLMVYSNVP Trigger: TGGAACATTGCTATATACCATGAGGCTTACAGTCCAAGCCGAATGTCCCATGCACCTGGAGGATTTCCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | AGAGGACAGGATCTTTGGAAAGATTCGGGGCATAGTTaGCAACAGCTACCGCATAGGCGTTGTTCTGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: RGQDLWKDSGHS*QQLPHRRCSVS Trigger: TGATACAGAACAACGCCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTCTTGTTCGGTTCTGGCGTCGTTGCACTTTTGGAAATGGTAGAGAGGACTTGTTTCCTTCCCAATaGACTGGCCCAGCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: WLLVRFWRRCTFGNGREDLFPSQ*TGPANH Trigger: ATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACAA...GTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | CGTGTAATGCGATCTAAGGAGTCCTACAGAGAGTGTCAGAGCTCCTACAGCACATCTCTAGCTTTCTCCTaGTGTGTGTCAAGCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVMRSKESYRECQSSYSTSLAFS*CVSSFQ Trigger: TTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGA...TGTGCTGTAGGAGCTCTGACACTCTCTGTAGGACTCCTTAGATCGCATTACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATATATCGCAGCTTGTTTGGCATaGTCATGTTATGGGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQHQKSSADNTYLESPYIAACLA*SCYGPL Trigger: CAGTGGCCCATAACATGACAATGCCAAACAAGCTGC...GATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
||
| 3UTR GCA 72 bp | CTGGGCAACATTCACAATGGAGAGCAGCTTACCATTTaGCTTCAAATGTCACACCACTTCACACTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LGNIHNGEQLTI*LQMSHHFTLLY Trigger: GTACAGAAGTGTGAAGTGGTGTGACATTTGAAGGCAAATGGTAAGCTGCTCTCCATTGTGAATGTTGCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR CCA 72 bp | TATGCCTTCTGGTCCATATGTAGCAGATATGCAGCTTaGTTTTCATGTGGTTCTCAAACAACTGGAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YAFWSICSRYAA*FSCGSQTTGVG Trigger: CCCCACTCCAGTTGTTTGAGAACCACATGAAAACCAAGCTGCATATCTGCTACATATGGACCAGAAGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTCTTGTTCGGTTCTGGCGTCGTTGCACTTTTGGAAATGGTAGAGAGGACTTGCTGGCCATTAAATaGTTAAGTCGAAGGATATTC | + |
|
Preference number: 3 (lower is better) Translates to: WLLVRFWRRCTFGNGREDLLAIK*LSRRIF Trigger: GAATATCCTTCGACTTAACAATTTAATGGCCAGCAA...GTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR TCA 72 bp | AGAATGCCTTCACCTTTTATTAAAGGGACTTGTCATTaGCTACACTCTTCCCGTCCCAAGCCCATCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RMPSPFIKGTCH*LHSSRPKPILF Trigger: AAAGAGGATGGGCTTGGGACGGGAAGAGTGTAGTCAATGACAAGTCCCTTTAATAAAAGGTGAAGGCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR TCA 72 bp | TCTTTTGGCACGGGATGTTTTCTGCCTGTATTTCCATaGGTTAGCAAATGCAGGTCTCCTTTAGAGGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFGTGCFLPVFP*VSKCRSPLEVY Trigger: GTAGACCTCTAAAGGAGACCTGCATTTGCTAACTCATGGAAATACAGGCAGAAAACATCCCGTGCCAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | CAACTAACTGCCCTTTCCTTTAAAATTAGCGGCTTCTaGGCCCTGATGAGAAGCCTTAAGGCAGAATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLTALSFKISGF*ALMRSLKAEFA Trigger: TGCAAATTCTGCCTTAAGGCTTCTCATCAGGGCTCAGAAGCCGCTAATTTTAAAGGAAAGGGCAGTTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | AGAGTCAACCAACCTGGACCCTTGAGGAGAGAGAATTaGCAATCAAATAACATACACAGGCTGTACCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: RVNQPGPLRREN*QSNNIHRLYLC Trigger: GCATAGGTACAGCCTGTGTATGTTATTTGATTGTCAATTCTCTCTCCTCAAGGGTCCAGGTTGGTTGACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTAATGGTTTTGCATGGCTTAAGCTGGACCATGAGAAAGCATCAGACATGGTTGTTTCCTTCCCAATaGACTGGCCCAGCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: IVMVLHGLSWTMRKHQTWLFPSQ*TGPANH Trigger: ATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACAA...CCATGTCTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR-3UTR CAA 90 bp | AACAGACCTGGTTTGCACTCTACTCAAATACTGTACAAAACTGCAAGAAACGCCAGAGCAGCTTACCATTaGCCTTCAAATGTCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: NRPGLHSTQILYKTARNARAAYH*PSNVTP Trigger: TGGTGTGACATTTGAAGGCAAATGGTAAGCTGCTCT...GGCGTTTCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGATAGGAGGAAGGATTGTAAGCCCCAAAGGGGATAGGAACTCCACAAGAAAAAACCCCAGCACTTTGTaGAAGATACAAATGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: RIGGRIVSPKGDRNSTRKNPSTL*KIQMDL Trigger: AAGATCCATTTGTATCTTCAACAAAGTGCTGGGGTT...TTTTCTTGTGGAGTTCCTATCCCCTTTGGGGCTTACAATCCTTCCTCCTATCCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR TCA 72 bp | AATCGTATAAGTGCTCCTCTGTACCTGGGACACCTATaGATTCTCATTCTTGGAGTTTTTGGCACAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NRISAPLYLGHL*ILILGVFGTAF Trigger: GAAAGCTGTGCCAAAAACTCCAAGAATGAGAATTCATAGGTGTCCCAGGTACAGAGGAGCACTTATACGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | CAAATGTCACACCACTTCACACTTCTGTACCCATCCTaGGCCTATTCACAAGAGCCTTTGTTGTACAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: QMSHHFTLLYPS*AYSQEPLLYRF Trigger: AAATCTGTACAACAAAGGCTCTTGTGAATAGGCTCAGGATGGGTACAGAAGTGTGAAGTGGTGTGACATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR CCA 72 bp | CATATCACAGGTAATTGTGAACTACTATGTGGGTGCTaGGAACTTGAAATCACGCCCTCTGCAAGAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: HITGNCELLCGC*ELEITPSAREI Trigger: TATTTCTCTTGCAGAGGGCGTGATTTCAAGTTCCCAGCACCCACATAGTAGTTCACAATTACCTGTGATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTAATGGTTTTGCATGGCTTAAGCTGGACCATGAGAAAGCATCAGACATGGTGGATTCGAAGCAGCTaGTTTGGCATTGTCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: IVMVLHGLSWTMRKHQTWWIRSS*FGIVML Trigger: TAACATGACAATGCCAAACAAGCTGCTTCGAATCCA...CCATGTCTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCCTGGTATGAGTACAAATCATGCAAAAACACACAGTGAAATCATACTTCTCCAAACACAGTTCTaGCTGGCACCGATTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CDPGMSTNHAKTHSEIILLQTQF*LAPILC Trigger: ACAGAGAATCGGTGCCAGCAAGAACTGTGTTTGGAG...AAGTATGATTTCACTGTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAATTTTGCTGACACTGTaGAAGGTTTTCTTGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKILLTL*KVFLAS Trigger: TGAAGCCAAGAAAACCTTCAACAGTGTCAGCAAAAT...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | GCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTaGCAACACATACCTGGAAAGTCCATATATCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: AFFLSPAPEKFS*QHIPGKSIYHH Trigger: ATGATGATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | GTCTTCAGAGCGAATTCTGTTAGTAGGATGAAGCTGTaGCCCTGGTATGAGTACAAATCATGCAAAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: VFRANSVSRMKL*PWYEYKSCKNT Trigger: TGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACAGCTTCATCCTACTAACAGAATTCGCTCTGAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | TCCATCTGCTTCTTCAAGTATTGTAATGGTTTTGCATaGCTTAAGCTGGACCATGAGAAAGCATCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: SICFFKYCNGFA*LKLDHEKASDM Trigger: CATGTCTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCTTCCAATGACACTATCAGGAGTCCAGATTTaGCTGGCCATTAAATTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: WFHISSFLLVCVKLPMTLSGVQI*LAIKLL Trigger: TAACAATTTAATGGCCAGCAAAATCTGGACTCCTGA...TAGTGTCATTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATATAAGTGAACTTCACTGCACTCCATTTCAGCCAAGATGGCAGCTTTCTTCAGGAGTCCAGATTTaGCTGGCCATTAAATTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SDISELHCTPFQPRWQLSSGVQI*LAIKLL Trigger: TAACAATTTAATGGCCAGCAAAATCTGGACTCCTGA...AGAAAGCTGCCATCTTGGCTGAAATGGAGTGCAGTGAAGTTCACTTATATCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | GTCAGAAGCATTGTAAGTCCAAATATATGTGACTTCTaGGGTTGTGTAAGCGTAGCTTCCAAATTTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRSIVSPNICDF*GCVSVASKFQW Trigger: CCACTGAAATTTGGAAGCTACGCTTACACAACCTCAGAAGTCACATATATTTGGACTTACAATGCTTCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | CCATATGACCTTAGTTCCTTGAAGTGTGGCCTTTGGTaGGTTGGTTGTAATAGAATGCCTTCACCTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: PYDLSSLKCGLW*VGCNRMPSPFI Trigger: AATAAAAGGTGAAGGCATTCTATTACAACCAACTCACCAAAGGCCACACTTCAAGGAACTAAGGTCATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR TCA 72 bp | GTTTGTTTCCAGAAGGTGCTCCTTTTATTGATGTTGTaGACAGACCTGGTTTGCACTCTACTCAAATACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCFQKVLLLLML*TDLVCTLLKYC Trigger: ACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTTCACAACATCAATAAAAGGAGCACCTTCTGGAAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR TCA 72 bp | CACAAGAAAACATCAGAGTCAACCAACCTGGACCCTTaGGGAGAGAGAATTGACAATCAAATAACATACACA | + |
|
Preference number: 3 (lower is better) Translates to: HKKTSESTNLDP*GERIDNQITYT Trigger: TGTGTATGTTATTTGATTGTCAATTCTCTCTCCTCAAGGGTCCAGGTTGGTTGACTCTGATGTTTTCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR TCA 72 bp | GAAATATTTCTGTTCACAAGTCAGTGTCTAAGGGTATaGAGCACACAGAACAAGTCCTTTGTAGATGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EIFLFTSQCLRV*STQNKSFVDAE Trigger: CTCAGCATCTACAAAGGACTTGTTCTGTGTGCTTCATACCCTTAGACACTGACTTGTGAACAGAAATATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR GCA 72 bp | ATTTGCAGTAAACAGGAAAGAAGAGAATCGTATAAGTaGTCCTCTGTACCTGGGACACCTATGAATTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ICSKQERRESYK*SSVPGTPMNSH Trigger: ATGAGAATTCATAGGTGTCCCAGGTACAGAGGAGCACTTATACGATTCTCTTCTTTCCTGTTTACTGCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | TCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTaGAAAGTCCATATATCATCATCATCATCATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSTRKVQLTTHT*KVHISSSSSSS Trigger: AGAAGATGATGATGATGATGATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR CCA 72 bp | AATCAAATAACATACACAGGCTGTACCTATGCCTTCTaGTCCATATGTAGCAGATATGCAGCTTGGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NQITYTGCTYAF*SICSRYAAWFS Trigger: TGAAAACCAAGCTGCATATCTGCTACATATGGACCAGAAGGCATAGGTACAGCCTGTGTATGTTATTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGTGGATTCGAAGCAGCTaGTTTGGCATTGTCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: IVIKHWFHISSFLLVCVKWIRSS*FGIVML Trigger: TAACATGACAATGCCAAACAAGCTGCTTCGAATCCA...CTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGCTTCTTCAAGTATTGTAATGGTTTTGCATGGCTTAAGCTGGACCATGAGTCATTGTTAGAACAGTaGTTACTCCAAACACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ICFFKYCNGFAWLKLDHESLLEQ*LLQTQF Trigger: GAACTGTGTTTGGAGTAACAACTGTTCTAACAATGA...CTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCCTGGTATGAGTACAAATCATGCAAAAACACACAGTGAAATCATACTTATTTTGCTGACACTGTaGAAGGTTTTCTTGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CDPGMSTNHAKTHSEIILILLTL*KVFLAS Trigger: TGAAGCCAAGAAAACCTTCAACAGTGTCAGCAAAAT...AAGTATGATTTCACTGTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198625.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGTCATTGTTAGAACAGTaGTTACTCCAAACACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IVIKHWFHISSFLLVCVKSLLEQ*LLQTQF Trigger: GAACTGTGTTTGGAGTAACAACTGTTCTAACAATGA...CTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| CDS-3UTR CCA 90 bp | CGTGTAATGCGATCTAAGGAGTCCTACAGAGAGTGTCAGAGCTCCTACAGCACAGATTCGGGGCATAGTTaGCAACAGCTACCGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVMRSKESYRECQSSYSTDSGHS*QQLPHR Trigger: CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATC...TGTGCTGTAGGAGCTCTGACACTCTCTGTAGGACTCCTTAGATCGCATTACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGTACCTGGGACACCTATGAATTCTCATTCTTGGAGTTTTTGGCACAGCAGCACCAACCTGACTaGGTCCCACACCAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCTWDTYEFSFLEFLAQQHQPD*VPHQKN Trigger: GTTCTTCTGGTGTGGGACCCAGTCAGGTTGGTGCTG...CTGTGCCAAAAACTCCAAGAATGAGAATTCATAGGTGTCCCAGGTACAGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| 3UTR CAA 72 bp | GTTTTCTTGGCTTCAGCTGGCTTGTTCTCTGGCTTCTaGTTCGGTTCTGGCGTCGTTGCACTTTTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VFLASAGLFSGF*FGSGVVALLEM Trigger: CATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCAGAGAACAAGCCAGCTGAAGCCAAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCTTCCAATGACACTACAGCACCAACCTGACTaGGTCCCACACCAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WFHISSFLLVCVKLPMTLQHQPD*VPHQKN Trigger: GTTCTTCTGGTGTGGGACCCAGTCAGGTTGGTGCTG...TAGTGTCATTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCAAGCTGGCTTGTTCTCTaGCTTCTTGTTCGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVKLPMTLAGVLNTPKASWLVL*LLVRFW Trigger: CCAGAACCGAACAAGAAGCCAGAGAACAAGCCAGCT...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR TCA 90 bp | CACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATATATCATCATCCCATCGGGAGCAACCTaGACGGAGTCAGAAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKSSADNTYLESPYIIIPSGAT*TESEAL Trigger: CAATGCTTCTGACTCCGTTCAGGTTGCTCCCGATGG...GATGATGATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACACATACTGATTTAACCTaGAGCCATCGGGAGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RWQLSSFLQHQKSSADNTHTDLT*SHREQP Trigger: AGGTTGCTCCCGATGGCTCCAGGTTAAATCAGTATG...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR CAA 72 bp | TCTGGCTTCTTGTTCGGTTCTGGCGTCGTTGCACTTTaGGAAATGGTAGAGAGGACAGGATCTTTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGFLFGSGVVAL*EMVERTGSLER Trigger: TCTTTCCAAAGATCCTGTCCTCTCTACCATTTCCAAAAGTGCAACGACGCCAGAACCGAACAAGAAGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| 3UTR CAA 72 bp | ACAGGCCATCCCAAAATACAAAATATCCACAGAGCTTaGGAGAAGTTCTACCCAGCAGCTGATGCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: TGHPKIQNIHRA*EKFYPAADADT Trigger: GGTGTCTGCATCAGCTGCTGGGTAGAACTTCTCCAAAGCTCTGTGGATATTTTGTATTTTGGGATGGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATCGAAGCAGCTTGTTTaGCATTGTCATGTTATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWQLSSFLQHQKSSADNTSKQLV*HCHVMG Trigger: GCCCATAACATGACAATGCCAAACAAGCTGCTTCGA...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGGACTTTTTCCCATTGTaGAAGAAGGTATCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPFSSTRKVQLTTHTWDFFPL*KKVSGV Trigger: GACTCCTGATACCTTCTTTCACAATGGGAAAAAGTC...CCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR TCA 90 bp | AGATGGCAGCTTTCTTCCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACACATGTTATGGGCCACTaGCTTTTTCCCATTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RWQLSSFLQHQKSSADNTHVMGH*LFPIVK Trigger: TTTCACAATGGGAAAAAGTCAGTGGCCCATAACATG...TGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGGAAGAAAGCTGCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGCTTCCAATGACACTACGGTTCTGGCGTCGTTaGACTTTTGGAAATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WFHISSFLLVCVKLPMTLRFWRR*TFGNGR Trigger: TCTACCATTTCCAAAAGTGCAACGACGCCAGAACCG...TAGTGTCATTGGAAGCTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAATTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKLASSS*MLASTN Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATATATCAGAGGACAGGATCTTTaGAAAGATTCGGGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQHQKSSADNTYLESPYIRGQDL*KDSGHS Trigger: ACTATGCCCCGAATCTTTCCAAAGATCCTGTCCTCT...GATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAATACAAAATATCCACAGAGCTTTGGAGAAGTTCTACCCAGCAGCTGATGTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKYKISTELWRSSTQQLMLASSS*MLASTN Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...CATCAGCTGCTGGGTAGAACTTCTCCAAAGCTCTGTGGATATTTTGTATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCAGCTTACCATTTGCCTTCAAATGTCACACCACTTCACACTTCTGTACAATGTTCCATCATCCTaGATTCGAAGCAGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEQLTICLQMSHHFTLLYNVPSS*IRSSLF Trigger: AAACAAGCTGCTTCGAATCCAGGATGATGGAACATT...GTACAGAAGTGTGAAGTGGTGTGACATTTGAAGGCAAATGGTAAGCTGCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATATATCAAGTCCAAATATATGTaGCTTCTGAGGTTGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQHQKSSADNTYLESPYIKSKYM*LLRLCK Trigger: CTTACACAACCTCAGAAGTCACATATATTTGGACTT...GATATATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | ATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGTTTCTTGGCTTCAGCTaGCTTGTTCTCTGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IVIKHWFHISSFLLVCVKFLGFS*LVLWLL Trigger: AAGAAGCCAGAGAACAAGCCAGCTGAAGCCAAGAAA...CTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| 3UTR CAA 72 bp | AATAGTCCATCTGCTTCTTCAAGTATTGTAATGGTTTaGCATGGCTTAAGCTGGACCATGAGAAAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSPSASSSIVMV*HGLSWTMRKHQ Trigger: CTGATGCTTTCTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGATGGACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| 3UTR CAA 72 bp | GGTGCTCCTTTTATTGATGTTGTGAACAGACCTGGTTaGCACTCTACTCAAATACTGTACAAAACTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAPFIDVVNRPG*HSTQILYKTAR Trigger: TCTTGCAGTTTTGTACAGTATTTGAGTAGAGTGCAAACCAGGTCTGTTCACAACATCAATAAAAGGAGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACTGTTTCCTTCCCAATTaGCTGGCCCAGCAAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: VGHKLAVISQTVQSKNQNCFLPN*LAQQII Trigger: TATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACA...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR TCA 90 bp | TACATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCCGTTGTTCTGTATCATaGCGGAGCCTTTCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIVIKHWFHISSFLLVCVRCSVS*RSLSLF Trigger: AAAAAGAGAAAGGCTCCGTCATGATACAGAACAACG...GACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACTCCAAACACAGTTCTTaGTGGCACCGATTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGHKLAVISQTVQSKNQNSKHSS*WHRFSV Trigger: AACAGAGAATCGGTGCCAGCAAGAACTGTGTTTGGA...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACTTAGCCTCATCTTCTTaGATGTTAGCCAGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGHKLAVISQTVQSKNQNLASSS*MLASTN Trigger: GTTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAA...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGTCATAAATTAGCAGTTATTAGTCAGACTGTACAAAGCAAAAACCAAAACCCCATCCTCTTTTTGTaGAGTAATTCACGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGHKLAVISQTVQSKNQNPILFL*SNSRLQ Trigger: TTGCAACCGTGAATTACTTCACAAAAAGAGGATGGG...GTTTTGGTTTTTGCTTTGTACAGTCTGACTAATAACTGCTAATTTATGACCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | GGACAGGATCTTTGGAAAGATTCGGGGCATAGTTGGCAACAGCTACCGCATAGGAGCAGAGACCATACATaGCATGTGCTCAATTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQDLWKDSGHSWQQLPHRSRDHT*HVLNFV Trigger: GACAAAATTGAGCACATGCAATGTATGGTCTCTGCT...CCTATGCGGTAGCTGTTGCCAACTATGCCCCGAATCTTTCCAAAGATCCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000572.7 ENSMUST00000198625.5 |
||
| CDS-3UTR CAA 90 bp | CGTGTAATGCGATCTAAGGAGTCCTACAGAGAGTGTCAGAGCTCCTACAGCACATTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RVMRSKESYRECQSSYSTFSLIF*DVSQHQ Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...TGTGCTGTAGGAGCTCTGACACTCTCTGTAGGACTCCTTAGATCGCATTACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCAGCAGCTTGTTTGGCATaGTCATGTTATGGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVKLPMTLAGVLNTPKAAACLA*SCYGPL Trigger: CAGTGGCCCATAACATGACAATGCCAAACAAGCTGC...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGTTATCCTCTGAGCTCTCTCTGCCACCCTAAACTGTTCTTAACGTCTCTCCAAACACAGTTCTaGCTGGCACCGATTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MCCYPLSSLCHPKLFLTSLQTQF*LAPILC Trigger: ACAGAGAATCGGTGCCAGCAAGAACTGTGTTTGGAG...AGACGTTAAGAACAGTTTAGGGTGGCAGAGAGAGCTCAGAGGATAACAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTCCAGCACCAGAAAAGTTCAGCTGACAACACATACCTGGAAAGTCCATTTGTTCTCTGGCTTCTaGTTCGGTTCTGGCGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFSSTRKVQLTTHTWKVHLFSGF*FGSGVV Trigger: AACGACGCCAGAACCGAACAAGAAGCCAGAGAACAA...ATGGACTTTCCAGGTATGTGTTGTCAGCTGAACTTTTCTGGTGCTGGAGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGTTATCCTCTGAGCTCTCTCTGCCACCCTAAACTGTTCTTAACGTCTAGCAGAGACCATACATaGCATGTGCTCAATTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MCCYPLSSLCHPKLFLTSSRDHT*HVLNFV Trigger: GACAAAATTGAGCACATGCAATGTATGGTCTCTGCT...AGACGTTAAGAACAGTTTAGGGTGGCAGAGAGAGCTCAGAGGATAACAGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | AGGATAGGAGGAAGGATTGTAAGCCCCAAAGGGGATAGGAACTCCACAAGAAAATGGATTCGAAGCAGCTaGTTTGGCATTGTCATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RIGGRIVSPKGDRNSTRKWIRSS*FGIVML Trigger: TAACATGACAATGCCAAACAAGCTGCTTCGAATCCA...TTTTCTTGTGGAGTTCCTATCCCCTTTGGGGCTTACAATCCTTCCTCCTATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAATTGTTTCCTTCCCAATaGACTGGCCCAGCAAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVCVKLPMTLAGVLNTPKLFPSQ*TGPANH Trigger: ATGATTTGCTGGGCCAGTCAATTGGGAAGGAAACAA...TTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | CGTGTAATGCGATCTAAGGAGTCCTACAGAGAGTGTCAGAGCTCCTACAGCACATCATTGTTAGAACAGTaGTTACTCCAAACACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVMRSKESYRECQSSYSTSLLEQ*LLQTQF Trigger: GAACTGTGTTTGGAGTAACAACTGTTCTAACAATGA...TGTGCTGTAGGAGCTCTGACACTCTCTGTAGGACTCCTTAGATCGCATTACACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTCAAGCTTCCAATGACACTAGCAGGGGTTCTAAACACTCCTAAAGCAGAAAGAAAACATCTATaGTATACTCCTCCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVKLPMTLAGVLNTPKAERKHL*YTPPSP Trigger: AGGACTGGGAGGAGTATACAATAGATGTTTTCTTTC...TGCTTTAGGAGTGTTTAGAACCCCTGCTAGTGTCATTGGAAGCTTGACACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| CDS-3UTR CAA 90 bp | AGGATAGGAGGAAGGATTGTAAGCCCCAAAGGGGATAGGAACTCCACAAGAAAATCAGGAGTCCAGATTTaGCTGGCCATTAAATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RIGGRIVSPKGDRNSTRKSGVQI*LAIKLL Trigger: TAACAATTTAATGGCCAGCAAAATCTGGACTCCTGA...TTTTCTTGTGGAGTTCCTATCCCCTTTGGGGCTTACAATCCTTCCTCCTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | ATCTGCTTCTTCAAGTATTGTAATGGTTTTGCATGGCTTAAGCTGGACCATGAGTTTAGCCTCATCTTCTaGGATGTTAGCCAGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ICFFKYCNGFAWLKLDHEFSLIF*DVSQHQ Trigger: TTGGTGCTGGCTAACATCCAAGAAGATGAGGCTAAA...CTCATGGTCCAGCTTAAGCCATGCAAAACCATTACAATACTTGAAGAAGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000572.7 |
||
| CDS-3UTR CAA 90 bp | AGGATAGGAGGAAGGATTGTAAGCCCCAAAGGGGATAGGAACTCCACAAGAAAATTGCTGGCCATTAAATaGTTAAGTCGAAGGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: RIGGRIVSPKGDRNSTRKLLAIK*LSRRIF Trigger: GAATATCCTTCGACTTAACAATTTAATGGCCAGCAA...TTTTCTTGTGGAGTTCCTATCCCCTTTGGGGCTTACAATCCTTCCTCCTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
||
| CDS-3UTR CAA 90 bp | TGTGACCCTGGTATGAGTACAAATCATGCAAAAACACACAGTGAAATCATACTTTTGGCTTCAGCTGGCTaGTTCTCTGGCTTCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: CDPGMSTNHAKTHSEIILLASAG*FSGFLF Trigger: GAACAAGAAGCCAGAGAACAAGCCAGCTGAAGCCAA...AAGTATGATTTCACTGTGTGTTTTTGCATGATTTGTACTCATACCAGGGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197284.5 |
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| CDS-3UTR CAA 90 bp | ATAGTAATTAAACACTGGTTTCACATCTCTAGCTTTCTCCTTGTGTGTGTCAAGAGCAGAGACCATACATaGCATGTGCTCAATTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: IVIKHWFHISSFLLVCVKSRDHT*HVLNFV Trigger: GACAAAATTGAGCACATGCAATGTATGGTCTCTGCT...CTTGACACACACAAGGAGAAAGCTAGAGATGTGAAACCAGTGTTTAATTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000572.7 ENSMUST00000197284.5 ENSMUST00000198625.5 |
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