Pregenerated sensors for GABRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010803Ensembl transcript IDs: ENSMUST00000020707.12, ENSMUST00000132971.3, ENSMUST00000153147.3, ENSMUST00000205546.2, ENSMUST00000206085.2, ENSMUST00000206105.2, ENSMUST00000207274.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTGCCCCTCTGAAAGCATCTTCATCATAAGAATAGAGAATTCTTaGGTGAATGGGCTATCTGGGAATAAGAGTAAAAAGGATAGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: ICPSESIFIIRIENS*VNGLSGNKSKKDSF Trigger: AAAACTATCCTTTTTACTCTTATTCCCAGATAGCCCATTCACCCAAGAATTCTCTATTCTTATGATGAAGATGCTTTCAGAGGGGCAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR TCA 90 bp | AATACATTCAACAATTCTAGAGCTTGCAAAATAGATTTGCCCCTCTaGAAGCATCTTCATCATAAGAATAGAGAATTCTTGGGTGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: NTFNNSRACKIDLPL*KHLHHKNREFLGEW Trigger: CCATTCACCCAAGAATTCTCTATTCTTATGATGAAGATGCTTTCAGAGGGGCAAATCTATTTTGCAAGCTCTAGAATTGTTGAATGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCGTCTGACATGCTTTTaGTCCCTGGCTTCCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMRLTCF*SLASSQ Trigger: CTGAGAGGAAGCCAGGGAGCAAAAGCATGTCAGACG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTATCTCCGTCTGACATaGTTTTGCTCCCTGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMYLRLT*FCSLAS Trigger: GGAAGCCAGGGAGCAAAAGCATGTCAGACGGAGATA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGACACTGGATTCAGAATaGTACAGTGATAGCCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMTLDSE*YSDSPT Trigger: GGTGGGGCTATCACTGTAGCATTCTGAATCCAGTGT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTCAGAATCCTGTCCCTaGGCTGAATACTCTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIISESCP*AEYSAL Trigger: CAGAGCAGAGTATTCAGCTCAGGGACAGGATTCTGA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTCAGAATCCTGTCCCTaGGCTGAATACTCTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SYSICFKWHLSPTGCSVLSESCP*AEYSAL Trigger: CAGAGCAGAGTATTCAGCTCAGGGACAGGATTCTGA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTATCTCCGTCTGACATaGTTTTGCTCCCTGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIIYLRLT*FCSLAS Trigger: GGAAGCCAGGGAGCAAAAGCATGTCAGACGGAGATA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTACACTGGATTCAGAATaGTACAGTGATAGCCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: SYSICFKWHLSPTGCSVLTLDSE*YSDSPT Trigger: GGTGGGGCTATCACTGTAGCATTCTGAATCCAGTGT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGATAGATTTGCCCCTCTaGAAGCATCTTCATCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMIDLPL*KHLHHK Trigger: CTTATGATGAAGATGCTTTCAGAGGGGCAAATCTAT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTTCACTGCACTAAGGTaGATCAACATTCAGTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMFTALR*INIQCH Trigger: ATGACACTGAATGTTGATGCACCTTAGTGCAGTGAA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCTAACAACTAAGAAATaGTGGCAATACGATCATTGC | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMLTTKK*WQYDHC Trigger: GCAATGATCGTATTGCCATCATTTCTTAGTTGTTAG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGCAGATAGGAATCACTaGGTTGAGAACAGAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIIADRNH*VENRKQ Trigger: TTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGCAGATAGGAATCACTaGGTTGAGAACAGAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SYSICFKWHLSPTGCSVLADRNH*VENRKQ Trigger: TTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGAATCTTGACTCAGTTTaGGTTTTATTGCCACTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: MRLKGFAKLWKARHAAAMNLDSV*VLLPLH Trigger: GTGAAGTGGCAATAAAACCCAAACTGAGTCAAGATT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTATAGATTTGCCCCTCTaGAAGCATCTTCATCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIIIDLPL*KHLHHK Trigger: CTTATGATGAAGATGCTTTCAGAGGGGCAAATCTAT...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTTTTGGCATAGCTCATaGAATTTAGGCAGGACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIIFWHSS*NLGRTK Trigger: TTTGGTCCTGCCTAAATTTCATGAGCTATGCCAAAA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGAAGCACATTTAAGATaGAACCAGAGATTTGTCGTT | + |
|
Preference number: 2 (lower is better) Translates to: LTPENNKINGNTDVRAIIEAHLR*NQRFVV Trigger: AACGACAAATCTCTGGTTTCATCTTAAATGTGCTTC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTAACAATTCTAGAGCTTaGAAAATAGATTTGCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SYSICFKWHLSPTGCSVLNNSRA*KIDLPL Trigger: GAGGGGCAAATCTATTTTGCAAGCTCTAGAATTGTT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR GCA 72 bp | CCCATTGAAAGGGTTTCCCCCACACTGGATTCAGAATaGTACAGTGATAGCCCCACCTTGCCCTATTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PIERVSPTLDSE*YSDSPTLPYLL Trigger: TAACAAATAGGGCAAGGTGGGGCTATCACTGTAGCATTCTGAATCCAGTGTGGGGGAAACCCTTTCAATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCCGTCTGACATGCTTTaGCTCCCTGGCTTCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MRLKGFAKLWKARHAAAMPSDML*LPGFLS Trigger: TGAGAGGAAGCCAGGGAGCAAAAGCATGTCAGACGG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR TCA 72 bp | TTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATaGGCAATCTTGACTCAGTTTGGGTTTTATTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLNSGKRDMQLP*AILTQFGFYCH Trigger: GTGGCAATAAAACCCAAACTGAGTCAAGATTGCTCATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGATAGGAATCACTGCGTaGAGAACAGAAAGCAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: MRLKGFAKLWKARHAAAMIGITA*RTESNS Trigger: AGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTAT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCCCACCTTGCCCTATTaGTTAGGCTTTCTTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LTPENNKINGNTDVRAIIPTLPY*LGFLTF Trigger: GAATGTAAGAAAGCCTAACAAATAGGGCAAGGTGGG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTCAGACAGGGGTCTCTaGTTCTTGTATGAAATATGG | + |
|
Preference number: 3 (lower is better) Translates to: SYSICFKWHLSPTGCSVLSDRGL*FLYEIW Trigger: CCATATTTCATACAAGAACAAGAGACCCCTGTCTGA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTAAGAATAGAGAATTCTaGGGTGAATGGGCTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SYSICFKWHLSPTGCSVLKNREF*GEWAIW Trigger: CCAGATAGCCCATTCACCCAAGAATTCTCTATTCTT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTATAGGAATCACTGCGTaGAGAACAGAAAGCAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SYSICFKWHLSPTGCSVLIGITA*RTESNS Trigger: AGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTAT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTGTTTTCCAACATCATaGGATAGCAGCTTTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTPENNKINGNTDVRAIICFPTS*DSSFLR Trigger: TCTCAAAAAGCTGCTATCCAATGATGTTGGAAAACA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| 3UTR TCA 72 bp | AACAATTCTAGAGCTTGCAAAATAGATTTGCCCCTCTaGAAGCATCTTCATCATAAGAATAGAGAATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NNSRACKIDLPL*KHLHHKNREFL Trigger: CAAGAATTCTCTATTCTTATGATGAAGATGCTTTCAGAGGGGCAAATCTATTTTGCAAGCTCTAGAATTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCACAGTGTGCTCAGAATaGGGGTCCAGGCCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCTVCSE*GSRPKD Trigger: ATCTTTGGGCCTGGACCCTCATTCTGAGCACACTGT...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCCTCCATATCGTGGTCTaGAACTGGTCCGAAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCLHIVV*NWSETG Trigger: ACCAGTTTCGGACCAGTTTCAGACCACGATATGGAG...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTTCTGCTACAACCACTaGACGGGCTGGCTCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMFCYNH*TGWLSG Trigger: ACCAGAGAGCCAGCCCGTTCAGTGGTTGTAGCAGAA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCAACGGGCTGGCTCTCTaGTCCACTCATAGACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCNGLAL*STHRQL Trigger: AAGTTGTCTATGAGTGGACCAGAGAGCCAGCCCGTT...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCTGGTCCGAAACTGGTaGCGAAAATGTCGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMLVRNW*RKCRSS Trigger: TGAAGACCGACATTTTCGTCACCAGTTTCGGACCAG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTTCTGCTACAACCACTaGACGGGCTGGCTCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLFCYNH*TGWLSG Trigger: ACCAGAGAGCCAGCCCGTTCAGTGGTTGTAGCAGAA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCTCTCCAGTACTGGACTaGACAATTCCAGAGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCSPVLD*TIPEST Trigger: AGTTGACTCTGGAATTGTTCAGTCCAGTACTGGAGA...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGGGCATGGTCATGTTGTaGGCCACAGACTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMGMVML*ATDFFP Trigger: TGGAAAGAAGTCTGTGGCCCACAACATGACCATGCC...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTTTAGTGGGCAGGCATaGGCATCCATAGGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMFSGQA*ASIGKS Trigger: AGACTTCCCTATGGATGCCCATGCCTGCCCACTAAA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGAACGGGCTGGCTCTCTaGTCCACTCATAGACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMNGLAL*STHRQL Trigger: AAGTTGTCTATGAGTGGACCAGAGAGCCAGCCCGTT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTACAGTGTGCTCAGAATaGGGGTCCAGGCCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLTVCSE*GSRPKD Trigger: ATCTTTGGGCCTGGACCCTCATTCTGAGCACACTGT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGGTCCAAAATTCTTGTaGAGACAGTGGTGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCGPKFL*RQWCCL Trigger: AAGACAACACCACTGTCTTCACAAGAATTTTGGACC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGAGTTCTTGCTGGTACTaGCTCTCTGTTGAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMSSCWY*LSVEPE Trigger: TTCTGGCTCAACAGAGAGTCAGTACCAGCAAGAACT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCCATACCCTCTCTTGGTaGAATAGTTTACTGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCHTLSW*NSLLWQ Trigger: TTGCCACAGTAAACTATTTCACCAAGAGAGGGTATG...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR GCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCCAGTCCATAGCTGTTaGATAAGCCACCTTCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIPVHSC*ISHLRE Trigger: CTCCCGAAGGTGGCTTATGCAACAGCTATGGACTGG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCAGCCAGAAGGAGACTTaGGAGAGAATAACTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCSQKET*ERITVI Trigger: AATGACAGTTATTCTCTCCCAAGTCTCCTTCTGGCT...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCTTTCTTTGGCTTTTCTaGAACCACGCTTTTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCFLWLF*NHAFAI Trigger: GATGGCAAAAGCGTGGTTCCAGAAAAGCCAAAGAAA...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCTGGTCCGAAACTGGTaGCGAAAATGTCGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIILVRNW*RKCRSS Trigger: TGAAGACCGACATTTTCGTCACCAGTTTCGGACCAG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCAAAGGCATAGCATACTaGAATAAACCAGTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCKGIAY*NKPVHS Trigger: GCTATGGACTGGTTTATTGCAGTATGCTATGCCTTT...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGGCATGGTCATGTTGTaGGCCACAGACTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLGMVML*ATDFFP Trigger: TGGAAAGAAGTCTGTGGCCCACAACATGACCATGCC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTCACGGTCAACCTCATaGTGTACAGCAGAGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLSRSTS*CTAECH Trigger: ATGGCACTCTGCTGTACACCATGAGGTTGACCGTGA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTTTAGTGGGCAGGCATaGGCATCCATAGGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLFSGQA*ASIGKS Trigger: AGACTTCCCTATGGATGCCCATGCCTGCCCACTAAA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCCATATTCTCCAGTACTaGACTGAACAATTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCHILQY*TEQFQS Trigger: ACTCTGGAATTGTTCAGTCCAGTACTGGAGAATATG...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCTCTTCAAGTGGAAGTaGGTCGTCATAACCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMLFKWK*VVITTY Trigger: ATATGTGGTTATGACGACTCACTTCCACTTGAAGAG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTAGTTCTTGCTGGTACTaGCTCTCTGTTGAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLSSCWY*LSVEPE Trigger: TTCTGGCTCAACAGAGAGTCAGTACCAGCAAGAACT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCATACCCTCTCTTGGTaGAATAGTTTACTGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MRLKGFAKLWKARHAAAMHTLSW*NSLLWQ Trigger: TTGCCACAGTAAACTATTTCACCAAGAGAGGGTATG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTCGGAAAGGCTATTCTTaGCAGTCGGTCGATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLRKGYS*QSVDFA Trigger: AGCAAAATCGACCGACTGTCAAGAATAGCCTTTCCG...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLVGAFS*GSLFKY Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGTGGGGGCTTTTAGCTaGGGCTCTCTGTTTAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIVGAFS*GSLFKY Trigger: GTATTTAAACAGAGAGCCTCAGCTAAAAGCCCCCAC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCCTCATAGACAACTTCTaGTCTTGTATAAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVKQIGITALRTESNSRCLIDNF*SCISIA Trigger: AGCTATGCTTATACAAGAGCAGAAGTTGTCTATGAG...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTTTCTTGGGTTCTGGTaGTTTTGTCTCAGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLFLGFW*FCLRLD Trigger: GTCAAGCCTGAGACAAAACCACCAGAACCCAAGAAA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTTTCTTGGGTTCTGGTaGTTTTGTCTCAGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIFLGFW*FCLRLD Trigger: GTCAAGCCTGAGACAAAACCACCAGAACCCAAGAAA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTCTCTTCAAGTGGAAGTaGGTCGTCATAACCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLLFKWK*VVITTY Trigger: ATATGTGGTTATGACGACTCACTTCCACTTGAAGAG...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGTATACTCCATATCGTaGTCTGAAACTGGTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLVYSIS*SETGPK Trigger: TTTCGGACCAGTTTCAGACCACGATATGGAGTATAC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGTATACTCCATATCGTaGTCTGAAACTGGTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIVYSIS*SETGPK Trigger: TTTCGGACCAGTTTCAGACCACGATATGGAGTATAC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCCAAGAAGGTCATACTaGTTTAAACGTGACCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIPRRSY*FKRDPS Trigger: AGATGGGTCACGTTTAAACCAGTATGACCTTCTTGG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTAAACTCAATCAGAGCTaGGAAAACAAAGGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIKLNQS*ENKGIA Trigger: TGCTATGCCTTTGTTTTCTCAGCTCTGATTGAGTTT...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTAAACTCAATCAGAGCTaGGAAAACAAAGGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLKLNQS*ENKGIA Trigger: TGCTATGCCTTTGTTTTCTCAGCTCTGATTGAGTTT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR GCA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTAAAGGCATAGCATACTaGAATAAACCAGTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYSICFKWHLSPTGCSVLKGIAY*NKPVHS Trigger: GCTATGGACTGGTTTATTGCAGTATGCTATGCCTTT...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCATATTCTCCAGTACTaGACTGAACAATTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIIHILQY*TEQFQS Trigger: ACTCTGGAATTGTTCAGTCCAGTACTGGAGAATATG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR TCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCTGTCATGGGTCCTTTaGATTTTAATCTTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIILSWVL*ILIFHP Trigger: AGGATGAAAGATTAAAATTCAAAGGACCCATGACAG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR GCA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTCTCATAGACAACTTCTaGTCTTGTATAAGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPENNKINGNTDVRAIILIDNF*SCISIA Trigger: AGCTATGCTTATACAAGAGCAGAAGTTGTCTATGAG...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS TCA 90 bp | GATCGCTCCAGACCCGGGAGAAAAGTGTGGGAGAGAGGATCGCGGTaGGTCGGAGCTGCGCGAGTCTGCGAGCGCGGGCGCGCCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DRSRPGRKVWERGSR*VGAARVCERGRAGR Trigger: CCGCCCGGCGCGCCCGCGCTCGCAGACTCGCGCAGCTCCGACTCACCGCGATCCTCTCTCCCACACTTTTCTCCCGGGTCTGGAGCGATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS TCA 90 bp | GCGCCGGGCGGAGGGCGTCCTCGCGCCGCGCTCACTCACACGGTCTaGGGCATCATGGACTCTGCGTGCTCCTGCACTGGAGATTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: APGGGRPRAALTHTV*GIMDSACSCTGDFI Trigger: TATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCGGCGCGAGGACGCCCTCCGCCCGGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS CCA 90 bp | GAGGGCGTCCTCGCGCCGCGCTCACTCACACGGTCTGAGGCATCATaGACTCTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGVLAPRSLTRSEAS*TLRAPALEISYPNL Trigger: CAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCGGCGCGAGGACGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS GCA 90 bp | TCCTCGCGCCGCGCTCACTCACACGGTCTGAGGCATCATGGACTCTaGGTGCTCCTGCACTGGAGATTTCATACCCAAATTTGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRRAHSHGLRHHGL*VLLHWRFHTQICFP Trigger: TGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCGGCGCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS GCA 90 bp | TGCACTGGAGATTTCATACCCAAATTTGCTTCCCAATATCCAATCTaGAGACGTGTGGAGAGCGCTCTGTCCTCGACTTGCTCTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CTGDFIPKFASQYPI*RRVESALSSTCSPS Trigger: CGAGGGAGAGCAAGTCGAGGACAGAGCGCTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS GCA 90 bp | CATGGACTCTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTTaGTTCCCAATATCCAATCTGCAGACGTGTGGAGAGCGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGLCVLLHWRFHTQI*FPISNLQTCGERSV Trigger: GACAGAGCGCTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS CCA 90 bp | ATTTCATACCCAAATTTGCTTCCCAATATCCAATCTGCAGACGTGTaGAGAGCGCTCTGTCCTCGACTTGCTCTCCCTCGCACACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISYPNLLPNIQSADV*RALCPRLALPRTLP Trigger: TGGGAGTGTGCGAGGGAGAGCAAGTCGAGGACAGAGCGCTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS CCA 90 bp | CACTCACACGGTCTGAGGCATCATGGACTCTGCGTGCTCCTGCACTaGAGATTTCATACCCAAATTTGCTTCCCAATATCCAATCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSHGLRHHGLCVLLH*RFHTQICFPISNLQ Trigger: CTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS CCA 90 bp | AACGTGACCCATCTTCTGCTACAACCACTGAACGGGCTGGCTCTCTaGTCCACTCATAGACAACTTCTGCTCTTGTATAAGCATAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVTHLLLQPLNGLAL*STHRQLLLLYKHSF Trigger: GAAGCTATGCTTATACAAGAGCAGAAGTTGTCTATGAGTGGACCAGAGAGCCAGCCCGTTCAGTGGTTGTAGCAGAAGATGGGTCACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 ENSMUST00000206105.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGGTACTGACTCTCTGTaGAGCCAGAAGGAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCGTDSL*SQKETW Trigger: CCAAGTCTCCTTCTGGCTCAACAGAGAGTCAGTACC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTCTGGAACCACGCTTTaGCCATCCCACGCATACCCT | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMSGTTL*PSHAYP Trigger: AGGGTATGCGTGGGATGGCAAAAGCGTGGTTCCAGA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGCGGAAAGGCTATTCTaGACAGTCGGTCGATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCAERLF*TVGRFC Trigger: GCAAAATCGACCGACTGTCAAGAATAGCCTTTCCGC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGAGCCAGAAGGAGACTaGGGAGAGAATAACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCEPEGD*GENNCH Trigger: ATGACAGTTATTCTCTCCCAAGTCTCCTTCTGGCTC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTCTGGAACCACGCTTTaGCCATCCCACGCATACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIISGTTL*PSHAYP Trigger: AGGGTATGCGTGGGATGGCAAAAGCGTGGTTCCAGA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACGC | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCDPLLS*AFLEPR Trigger: GCGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGGTCTTTAAGTTCATCTaGGGAGGGCTGTCCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMVFKFI*GGLSIA Trigger: AGCTATGGACAGCCCTCCCAAGATGAACTTAAAGAC...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGTTAGGCATGGTCATGTaGTGGGCCACAGACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMLGMVM*WATDFF Trigger: AAAGAAGTCTGTGGCCCACAACATGACCATGCCTAA...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGGAGCCAGAAGGAGACTaGGGAGAGAATAACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMEPEGD*GENNCH Trigger: ATGACAGTTATTCTCTCCCAAGTCTCCTTCTGGCTC...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGGTACTGACTCTCTGTaGAGCCAGAAGGAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYSICFKWHLSPTGCSVLGTDSL*SQKETW Trigger: CCAAGTCTCCTTCTGGCTCAACAGAGAGTCAGTACC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGCTCCAAAGACAGTTCTaGCTGGTACTGACTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMLQRQF*LVLTLC Trigger: ACAGAGAGTCAGTACCAGCAAGAACTGTCTTTGGAG...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGCACGGCAGATATGTTaGAATAACAAAGTAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCARQIC*NNKVAN Trigger: ATTGGCTACTTTGTTATTCAAACATATCTGCCGTGC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGCGGAAAGGCTATTCTaGACAGTCGGTCGATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIIAERLF*TVGRFC Trigger: GCAAAATCGACCGACTGTCAAGAATAGCCTTTCCGC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGTCTTTAAGTTCATCTaGGGAGGGCTGTCCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYSICFKWHLSPTGCSVLVFKFI*GGLSIA Trigger: AGCTATGGACAGCCCTCCCAAGATGAACTTAAAGAC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGGAAAAACACATCTATaGTATACTCCATATCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCGKTHL*YTPYRG Trigger: ACCACGATATGGAGTATACAATAGATGTGTTTTTCC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCACTGTCATGGGTCCTTaGAATTTTAATCTTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCTVMGP*NFNLSS Trigger: GGATGAAAGATTAAAATTCAAAGGACCCATGACAGT...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTTAGGCATGGTCATGTaGTGGGCCACAGACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIILGMVM*WATDFF Trigger: AAAGAAGTCTGTGGCCCACAACATGACCATGCCTAA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTAAAGCAGATAGGAATCACTGCGTTGAGAACAGAAAGCAATTCTCGGTGCGTAGGAGCATATGTGTaGTTTTTCTTAATGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVKQIGITALRTESNSRCVGAYV*FFLMRG Trigger: TCCTCTCATTAAGAAAAACAACACATATGCTCCTAC...GCACCGAGAATTGCTTTCTGTTCTCAACGCAGTGATTCCTATCTGCTTTACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGACAGTCGGTCGATTTaGCTGACGCTGTTAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SYSICFKWHLSPTGCSVLDSRSI*LTLLKV Trigger: AACCTTTAACAGCGTCAGCAAAATCGACCGACTGTC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTTCCAGAGTCAACTGTTaGTCCAAGAAGGTCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: SYSICFKWHLSPTGCSVLSRVNC*SKKVIL Trigger: CAGTATGACCTTCTTGGACAAACAGTTGACTCTGGA...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTTCCAGAGTCAACTGTTaGTCCAAGAAGGTCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIISRVNC*SKKVIL Trigger: CAGTATGACCTTCTTGGACAAACAGTTGACTCTGGA...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGATCCTTTACTTTCTTaGGCTTTTCTGGAACCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIIDPLLS*AFLEPR Trigger: GCGTGGTTCCAGAAAAGCCAAAGAAAGTAAAGGATC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTAAAAGGTTTTGCTAAACTCTGGAAAGCGAGACATGCAGCTGCCATGACAGACTTCTTTCCATaGTGGAAAAATGTATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MRLKGFAKLWKARHAAAMTDFFP*WKNVSG Trigger: TCCAGATACATTTTTCCACAATGGAAAGAAGTCTGT...CATGGCAGCTGCATGTCTCGCTTTCCAGAGTTTAGCAAAACCTTTTAATCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTAGACAACTTCTGCTCTaGTATAAGCATAGCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIIRQLLL*YKHSFR Trigger: TCGGAAGCTATGCTTATACAAGAGCAGAAGTTGTCT...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTGCACGGCAGATATGTTaGAATAACAAAGTAGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIIARQIC*NNKVAN Trigger: ATTGGCTACTTTGTTATTCAAACATATCTGCCGTGC...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTCAATATGTTTTAAGTGGCATCTGTCTCCTACAGGCTGTTCTGTTCTTGGAAAAACACATCTATaGTATACTCCATATCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SYSICFKWHLSPTGCSVLGKTHL*YTPYRG Trigger: ACCACGATATGGAGTATACAATAGATGTGTTTTTCC...AAGAACAGAACAGCCTGTAGGAGACAGATGCCACTTAAAACATATTGAGTATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS-3UTR CAA 90 bp | TTAACGCCGGAAAATAACAAGATAAACGGCAACACGGATGTTAGAGCCATAATTACAGACTTCTTTCCATaGTGGAAAAATGTATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTPENNKINGNTDVRAIITDFFP*WKNVSG Trigger: TCCAGATACATTTTTCCACAATGGAAAGAAGTCTGT...AATTATGGCTCTAACATCCGTGTTGCCGTTTATCTTGTTATTTTCCGGCGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS TCA 72 bp | AGACCCGGGAGAAAAGTGTGGGAGAGAGGATCGCGGTaGGTCGGAGCTGCGCGAGTCTGCGAGCGCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPGRKVWERGSR*VGAARVCERGR Trigger: GCGCCCGCGCTCGCAGACTCGCGCAGCTCCGACTCACCGCGATCCTCTCTCCCACACTTTTCTCCCGGGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS TCA 72 bp | GGAGGGCGTCCTCGCGCCGCGCTCACTCACACGGTCTaGGGCATCATGGACTCTGCGTGCTCCTGCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGRPRAALTHTV*GIMDSACSCTG Trigger: TCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCGGCGCGAGGACGCCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS CCA 72 bp | CTCGCGCCGCGCTCACTCACACGGTCTGAGGCATCATaGACTCTGCGTGCTCCTGCACTGGAGATTTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LAPRSLTRSEAS*TLRAPALEISY Trigger: GTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCGGCGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS TCA 72 bp | GCTGTCCATAGCTTCTTCCCGACAGTGTGCTCAGAATaGGGGTCCAGGCCCAAAGATAGTCAGAGAGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: AVHSFFPTVCSE*GSRPKDSQRDP Trigger: GGGGTCTCTCTGACTATCTTTGGGCCTGGACCCTCATTCTGAGCACACTGTCGGGAAGAAGCTATGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020707.12 ENSMUST00000132971.3 ENSMUST00000153147.3 ENSMUST00000205546.2 ENSMUST00000206105.2 ENSMUST00000207274.2 |
||
| CDS GCA 72 bp | CGCGCTCACTCACACGGTCTGAGGCATCATGGACTCTaGGTGCTCCTGCACTGGAGATTTCATACCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: RAHSHGLRHHGL*VLLHWRFHTQI Trigger: AATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACCGTGTGAGTGAGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS CAA 90 bp | TCATGGACTCTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTaGCTTCCCAATATCCAATCTGCAGACGTGTGGAGAGCGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SWTLRAPALEISYPN*LPNIQSADVWRALC Trigger: ACAGAGCGCTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS CCA 72 bp | GGTCTGAGGCATCATGGACTCTGCGTGCTCCTGCACTaGAGATTTCATACCCAAATTTGCTTCCCAATATCC | + |
|
Preference number: 6 (lower is better) Translates to: GLRHHGLCVLLH*RFHTQICFPIS Trigger: GGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGATGCCTCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132971.3 ENSMUST00000206085.2 |
||
| CDS GCA 72 bp | GATTTCATACCCAAATTTGCTTCCCAATATCCAATCTaGAGACGTGTGGAGAGCGCTCTGTCCTCGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DFIPKFASQYPI*RRVESALSSTC Trigger: GCAAGTCGAGGACAGAGCGCTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS GCA 72 bp | TGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTTaGTTCCCAATATCCAATCTGCAGACGTGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CVLLHWRFHTQI*FPISNLQTCGE Trigger: CTCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS CCA 72 bp | CATCTTCTGCTACAACCACTGAACGGGCTGGCTCTCTaGTCCACTCATAGACAACTTCTGCTCTTGTATAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLLLQPLNGLAL*STHRQLLLLYK Trigger: CTTATACAAGAGCAGAAGTTGTCTATGAGTGGACCAGAGAGCCAGCCCGTTCAGTGGTTGTAGCAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 ENSMUST00000206105.2 |
||
| CDS CAA 72 bp | CTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTaGCTTCCCAATATCCAATCTGCAGACGTGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRAPALEISYPN*LPNIQSADVWR Trigger: TCTCCACACGTCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132971.3 |
||
| CDS CAA 72 bp | TCTTGTGAAGACAGTGGTGTTGTCTTTAAGTTCATCTaGGGAGGGCTGTCCATAGCTTCTTCCCGACAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCEDSGVVFKFI*GGLSIASSRQC Trigger: ACACTGTCGGGAAGAAGCTATGGACAGCCCTCCCAAGATGAACTTAAAGACAACACCACTGTCTTCACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020707.12 ENSMUST00000153147.3 ENSMUST00000205546.2 ENSMUST00000206105.2 ENSMUST00000207274.2 |
||
| CDS CAA 72 bp | CTGGCTCTCTGGTCCACTCATAGACAACTTCTGCTCTaGTATAAGCATAGCTTCCGAATTTTAGTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LALWSTHRQLLL*YKHSFRILVGR Trigger: CCTGCCCACTAAAATTCGGAAGCTATGCTTATACAAGAGCAGAAGTTGTCTATGAGTGGACCAGAGAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 ENSMUST00000206105.2 |
||
| CDS CAA 72 bp | AGCAGCGGAAAGGCTATTCTTGACAGTCGGTCGATTTaGCTGACGCTGTTAAAGGTTTTCTTGGGTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSGKAILDSRSI*LTLLKVFLGSG Trigger: ACCAGAACCCAAGAAAACCTTTAACAGCGTCAGCAAAATCGACCGACTGTCAAGAATAGCCTTTCCGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS CAA 72 bp | CTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTCTGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRAPALEISYPN*LPNIQSAALIK Trigger: TTTGATCAGAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206085.2 |
||
| CDS CAA 90 bp | ATTCCAAATAGCAGCGGAAAGGCTATTCTTGACAGTCGGTCGATTTaGCTGACGCTGTTAAAGGTTTTCTTGGGTTCTGGTGGTTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IPNSSGKAILDSRSI*LTLLKVFLGSGGFV Trigger: GACAAAACCACCAGAACCCAAGAAAACCTTTAACAGCGTCAGCAAAATCGACCGACTGTCAAGAATAGCCTTTCCGCTGCTATTTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS CAA 90 bp | TCATGGACTCTGCGTGCTCCTGCACTGGAGATTTCATACCCAAATTaGCTTCCCAATATCCAATCTGCAGCTCTGATCAAATATTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: SWTLRAPALEISYPN*LPNIQSAALIKYLT Trigger: GGTTAAATATTTGATCAGAGCTGCAGATTGGATATTGGGAAGCAAATTTGGGTATGAAATCTCCAGTGCAGGAGCACGCAGAGTCCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206085.2 |
||
| CDS CCA 72 bp | TTTGCTGACGCTGTTAAAGGTTTTCTTGGGTTCTGGTaGTTTTGTCTCAGGCTTGACTTCTTTCGGTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: FADAVKGFLGFW*FCLRLDFFRFY Trigger: ATAGAACCGAAAGAAGTCAAGCCTGAGACAAAACCACCAGAACCCAAGAAAACCTTTAACAGCGTCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 |
||
| CDS TCA 72 bp | GAAAAACACATCTATTGTATACTCCATATCGTGGTCTaGAACTGGTCCGAAACTGGTGACGAAAATGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EKHIYCILHIVV*NWSETGDENVG Trigger: ACCGACATTTTCGTCACCAGTTTCGGACCAGTTTCAGACCACGATATGGAGTATACAATAGATGTGTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020707.12 ENSMUST00000205546.2 ENSMUST00000206105.2 ENSMUST00000207274.2 |
||