Pregenerated sensors for GABPB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038766Ensembl transcript IDs: ENSMUST00000098873.11, ENSMUST00000107204.8, ENSMUST00000107209.8, ENSMUST00000136139.8
Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGGGAGGTCAGCAATGGGCCTGGGGTGGCTCCTTGCTGTGGCAGTaGTACCTGCTCCCTTTGTCACCTGAGCACTACAGGGCACAGACT | + |
Preference number: 1 (lower is better) Translates to: RGGQQWAWGGSLLWQ*YLLPLSPEHYRAQT Trigger: AGTCTGTGCCCTGTAGTGCTCAGGTGACAAAGGGAGCAGGTATCACTGCCACAGCAAGGAGCCACCCCAGGCCCATTGCTGACCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | AGGCTAGTTAGAATCCCAAGGACCTGCTTGCCTCTGCTCCCCAAGTaGAGGGATGAGAGCCCGTCACTGCTCCATCTGGTCATTTCCGGG | + |
Preference number: 1 (lower is better) Translates to: RLVRIPRTCLPLLPK*RDESPSLLHLVISG Trigger: CCCGGAAATGACCAGATGGAGCAGTGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGATTCTAACTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | GACTCAGAGCCCAGAAGCCTCTCTCTGGAAGCACAGCCTGGAGGGTaGTGCTCTGCACATAGCTTCTACCCATCAGCAGCACAGCTTCTC | + |
Preference number: 1 (lower is better) Translates to: DSEPRSLSLEAQPGG*CSAHSFYPSAAQLL Trigger: GAGAAGCTGTGCTGCTGATGGGTAGAAGCTATGTGCAGAGCAGCACCCTCCAGGCTGTGCTTCCAGAGAGAGGCTTCTGGGCTCTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | CTGTACAGCCCTAGGCTGCCTGGAACTCAGAGATCCACCTGTCTCTaGCTCCTGAGTGCAATATTAAAGGTGTGTGCCCCACGCCTGGCT | + |
Preference number: 1 (lower is better) Translates to: LYSPRLPGTQRSTCL*LLSAILKVCAPRLA Trigger: AGCCAGGCGTGGGGCACACACCTTTAATATTGCACTCAGGAGGCAGAGACAGGTGGATCTCTGAGTTCCAGGCAGCCTAGGGCTGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | GTTTCCATCTCAAGACCAGAGACTCAGAGCCCAGAAGCCTCTCTCTaGAAGCACAGCCTGGAGGGTGCTGCTCTGCACATAGCTTCTACC | + |
Preference number: 1 (lower is better) Translates to: VSISRPETQSPEASL*KHSLEGAALHIAST Trigger: GGTAGAAGCTATGTGCAGAGCAGCACCCTCCAGGCTGTGCTTCCAGAGAGAGGCTTCTGGGCTCTGAGTCTCTGGTCTTGAGATGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | GGACACTGTGAAAAGAATCCTGGGCTACCCACCCCTACATGGCCTTaGCAGAAGGACACATTGAGCAAGGCCAGGGAGCAGAGTTGCTAC | + |
Preference number: 1 (lower is better) Translates to: GHCEKNPGLPTPTWP*QKDTLSKAREQSCY Trigger: GTAGCAACTCTGCTCCCTGGCCTTGCTCAATGTGTCCTTCTGCCAAGGCCATGTAGGGGTGGGTAGCCCAGGATTCTTTTCACAGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | TGTGAAGACAGGGTCCCACTGTGTAGCCTTGCCTGGCCTGGAACTTaGTACGTAGACCACATGGCCTTGAACTCAACAGAGATCTGCCTG | + |
Preference number: 1 (lower is better) Translates to: CEDRVPLCSLAWPGT*YVDHMALNSTEICL Trigger: CAGGCAGATCTCTGTTGAGTTCAAGGCCATGTGGTCTACGTACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGACCCTGTCTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | ACAAGAGGACACTGTGAAAAGAATCCTGGGCTACCCACCCCTACATaGCCTTGGCAGAAGGACACATTGAGCAAGGCCAGGGAGCAGAGT | + |
Preference number: 1 (lower is better) Translates to: TRGHCEKNPGLPTPT*PWQKDTLSKAREQS Trigger: ACTCTGCTCCCTGGCCTTGCTCAATGTGTCCTTCTGCCAAGGCCATGTAGGGGTGGGTAGCCCAGGATTCTTTTCACAGTGTCCTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | TCCCCAGCCTGGTCAGTCTGCCACACTGCTTTGTGTTTGACAGAGTaGTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAA | + |
Preference number: 1 (lower is better) Translates to: SPAWSVCHTALCLTE*SVLQKAPVSHMTQK Trigger: TTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | AAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTaGTTTGTGTTTGACAGAGTGCTCAGTGCTACAGAAAGCACCAGT | + |
Preference number: 1 (lower is better) Translates to: KSTGANLPSLVSLPH*FVFDRVLSATESTS Trigger: ACTGGTGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | TGCTCTGCTATATGTGAAGACAGGGTCCCACTGTGTAGCCTTGCCTaGCCTGGAACTTGGTACGTAGACCACATGGCCTTGAACTCAACA | + |
Preference number: 1 (lower is better) Translates to: CSAICEDRVPLCSLA*PGTWYVDHMALNST Trigger: TGTTGAGTTCAAGGCCATGTGGTCTACGTACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGACCCTGTCTTCACATATAGCAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR TCA 90 bp | TTCAGGCTGGCCTTGCACTCATGTCAACCCTCCTCCTATAGCTCTTaGCTGCTAACAGGCATGAGTACCGTGCCCAGCTATACAAACACA | + |
Preference number: 1 (lower is better) Translates to: FRLALHSCQPSSYSS*LLTGMSTVPSYTNT Trigger: TGTGTTTGTATAGCTGGGCACGGTACTCATGCCTGTTAGCAGTCAAGAGCTATAGGAGGAGGGTTGACATGAGTGCAAGGCCAGCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | GTCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTaGCCCTCTTTTATTGAAGGACTCTCTTTAGCTCAGGCTGACCTC | + |
Preference number: 1 (lower is better) Translates to: VYFPSAGTQGMCHHI*PSFIEGLSLAQADL Trigger: GAGGTCAGCCTGAGCTAAAGAGAGTCCTTCAATAAAAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | GGAGACTTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGGATTGTaGAGCTGCCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAGATC | + |
Preference number: 1 (lower is better) Translates to: GDFEQQDEERKMSGL*SCLKAGQLSEPEKI Trigger: GATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAAGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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3UTR GCA 90 bp | ATAGTCTCTGTGGTCCATGTTGCCCTAGAGTACATCTCACTGTATTaGCTAGAAGTCTCATCTGAGACCCCCAGTGATCCTCTGAGTGGG | + |
Preference number: 1 (lower is better) Translates to: IVSVVHVALEYISLY*LEVSSETPSDPLSG Trigger: CCCACTCAGAGGATCACTGGGGGTCTCAGATGAGACTTCTAGGCAATACAGTGAGATGTACTCTAGGGCAACATGGACCACAGAGACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR TCA 90 bp | AGCAGCAGGACGAAGAAAGGAAGATGTCTGGATTGTGGAGCTGCCTaGAAGCTGGGCAGCTCTCAGAACCAGAAAAGATCTGTAGTCTTT | + |
Preference number: 1 (lower is better) Translates to: SSRTKKGRCLDCGAA*KLGSSQNQKRSVVF Trigger: AAAGACTACAGATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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3UTR GCA 90 bp | AGCTTCTCTCCTGAGTTTAAGTCTGCTGTCAACGGTTTTCTTCCCTaGACTTCTGCCCTCCTCTCGCTGTGTACATACAGTGTCAAAGGA | + |
Preference number: 1 (lower is better) Translates to: SFSPEFKSAVNGFLP*TSALLSLCTYSVKG Trigger: TCCTTTGACACTGTATGTACACAGCGAGAGGAGGGCAGAAGTGCAGGGAAGAAAACCGTTGACAGCAGACTTAAACTCAGGAGAGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | TTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGGATTGTGGAGCTaGCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAGATCTGTAGT | + |
Preference number: 1 (lower is better) Translates to: FEQQDEERKMSGLWS*LKAGQLSEPEKICS Trigger: ACTACAGATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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3UTR CCA 90 bp | CCTTCGTGTAGCCCGGGATGGCCTCTAACTCTGAATCCCAAGTGCTaGGATTTCTCACGTTGCCCTGTGCTTGACTATTCAATAATAATC | + |
Preference number: 1 (lower is better) Translates to: PSCSPGWPLTLNPKC*DFSRCPVLDYSIII Trigger: GATTATTATTGAATAGTCAAGCACAGGGCAACGTGAGAAATCCCAGCACTTGGGATTCAGAGTTAGAGGCCATCCCGGGCTACACGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | CTGACAAGGAGCCTTTGCATTTATTTTCTTGCTTCCCCACGAACATaGACCATCTCCTCGGGCCTCAACTTCCTTAATGCTCCCTCTACA | + |
Preference number: 1 (lower is better) Translates to: LTRSLCIYFLASPRT*TISSGLNFLNAPST Trigger: TGTAGAGGGAGCATTAAGGAAGTTGAGGCCCGAGGAGATGGTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | GTGACCAGAGTTCACCACGTGCCTCAGTTCTTACAGCATTGGAAGTaGCTGATGTTAGGGGATGTCCACCTTGGCATTCTTAGAATGAGT | + |
Preference number: 1 (lower is better) Translates to: VTRVHHVPQFLQHWK*LMLGDVHLGILRMS Trigger: ACTCATTCTAAGAATGCCAAGGTGGACATCCCCTAACATCAGCCACTTCCAATGCTGTAAGAACTGAGGCACGTGGTGAACTCTGGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | CAGAAAGTGACCAGAGTTCACCACGTGCCTCAGTTCTTACAGCATTaGAAGTGGCTGATGTTAGGGGATGTCCACCTTGGCATTCTTAGA | + |
Preference number: 1 (lower is better) Translates to: QKVTRVHHVPQFLQH*KWLMLGDVHLGILR Trigger: TCTAAGAATGCCAAGGTGGACATCCCCTAACATCAGCCACTTCCAATGCTGTAAGAACTGAGGCACGTGGTGAACTCTGGTCACTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR TCA 90 bp | TTGTACATAAAGCTGCCAGACAACTTGAAAAACAAGAGGACACTGTaGAAAGAATCCTGGGCTACCCACCCCTACATGGCCTTGGCAGAA | + |
Preference number: 1 (lower is better) Translates to: LYIKLPDNLKNKRTL*KESWATHPYMALAE Trigger: TTCTGCCAAGGCCATGTAGGGGTGGGTAGCCCAGGATTCTTTTCACAGTGTCCTCTTGTTTTTCAAGTTGTCTGGCAGCTTTATGTACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | GGGATGAGAGCCCGTCACTGCTCCATCTGGTCATTTCCGGGTTTTTaGTGTTATTTTGAGAAAGATCTCACTGAAGCCAAAGCTGATCTT | + |
Preference number: 1 (lower is better) Translates to: GMRARHCSIWSFPGF*CYFEKDLTEAKADL Trigger: AAGATCAGCTTTGGCTTCAGTGAGATCTTTCTCAAAATAACAGCAAAAACCCGGAAATGACCAGATGGAGCAGTGACGGGCTCTCATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | AACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTaGTCCTCCTTAAAGGTGGAAAGAAGCCCTGCTCAGAAGGGAGGA | + |
Preference number: 1 (lower is better) Translates to: NSETSCSKVTWNNET*SSLKVERSPAQKGG Trigger: TCCTCCCTTCTGAGCAGGGCTTCTTTCCACCTTTAAGGAGGACCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR TCA 90 bp | TGGTGTAAATTCATCTGCTCAAGTAGAGAACTGCAAGCTACTCTCTaGAACATCAGGACAGAAAGTGACCAGAGTTCACCACGTGCCTCA | + |
Preference number: 1 (lower is better) Translates to: WCKFICSSRELQATL*NIRTESDQSSPRAS Trigger: TGAGGCACGTGGTGAACTCTGGTCACTTTCTGTCCTGATGTTTCAGAGAGTAGCTTGCAGTTCTCTACTTGAGCAGATGAATTTACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CCA 90 bp | ACTAGGGATACAGGTGCACCTGAGACCATGCATGGTTTGTTAGAGTaGGTGCTAAGATCTGAATTTGGACCTTCAAATTTGTATATAGCA | + |
Preference number: 1 (lower is better) Translates to: TRDTGAPETMHGLLE*VLRSEFGPSNLYIA Trigger: TGCTATATACAAATTTGAAGGTCCAAATTCAGATCTTAGCACCCACTCTAACAAACCATGCATGGTCTCAGGTGCACCTGTATCCCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR GCA 90 bp | AGCACCAGAGGCTCAAAGCTATTTAATTCTAATTCACATCCTTCTTaGTTTTGGTCTCCTGGTAAGGATAGTCACAAGAAATGGAGCACA | + |
Preference number: 1 (lower is better) Translates to: STRGSKLFNSNSHPS*FWSPGKDSHKKWST Trigger: TGTGCTCCATTTCTTGTGACTATCCTTACCAGGAGACCAAAAGCAAGAAGGATGTGAATTAGAATTAAATAGCTTTGAGCCTCTGGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR TCA 90 bp | CAGAACCAGAAAAGATCTGTAGTCTTTAGCTTTGCAAAGACTACTTaGGAGGCTAGCTTTAGCTTTGGCTTTATAGTAAGACTCTATCTC | + |
Preference number: 1 (lower is better) Translates to: QNQKRSVVFSFAKTT*EASFSFGFIVRLYL Trigger: GAGATAGAGTCTTACTATAAAGCCAAAGCTAAAGCTAGCCTCTCAAGTAGTCTTTGCAAAGCTAAAGACTACAGATCTTTTCTGGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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3UTR GCA 90 bp | GCAACAAATTATCCCACTAATCAAGGTAACCAGAACCATGTTAACTaGCAAGCTCTTTCCAGGTTAAAAATGCATGTTTTCTTCATGATC | + |
Preference number: 1 (lower is better) Translates to: ATNYPTNQGNQNHVN*QALSRLKMHVFFMI Trigger: GATCATGAAGAAAACATGCATTTTTAACCTGGAAAGAGCTTGGCAGTTAACATGGTTCTGGTTACCTTGATTAGTGGGATAATTTGTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTCCTAGGCTCAGGCCTTaGGCCCGGCTATTGTTACCC | + |
Preference number: 2 (lower is better) Translates to: TKSTGANLPSLVSLPHCFPRLRP*ARLLLP Trigger: GGGTAACAATAGCCGGGCTCAAGGCCTGAGCCTAGG...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTCCTCTGCTCCCCAAGTaGAGGGATGAGAGCCCGTCA | + |
Preference number: 2 (lower is better) Translates to: TKSTGANLPSLVSLPHCFPLLPK*RDESPS Trigger: TGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAGG...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CAA 90 bp | GGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTGTGTTaGACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATG | + |
Preference number: 2 (lower is better) Translates to: GQTSPAWSVCHTALC*TECSVLQKAPVSHM Trigger: CATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGCCTGGGGTGGCTCCTTaGTGTGGCAGTGATACCTGC | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLPGVAP*CGSDTC Trigger: GCAGGTATCACTGCCACAGCAAGGAGCCACCCCAGG...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR CCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTCTGGAAGCACAGCCTaGAGGGTGCTGCTCTGCACA | + |
Preference number: 2 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSGSTA*RVLLCT Trigger: TGTGCAGAGCAGCACCCTCCAGGCTGTGCTTCCAGA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CAA 90 bp | GGGCATGATCCCTGGGAGCTGGATGGACATGTAATTGTGAGCAGCTaGACTCGGGTGCTAGGAATGGAACCCAGGTTCTCTGGAAGAGCA | + |
Preference number: 2 (lower is better) Translates to: GHDPWELDGHVIVSS*TRVLGMEPRFSGRA Trigger: TGCTCTTCCAGAGAACCTGGGTTCCATTCCTAGCACCCGAGTCAAGCTGCTCACAATTACATGTCCATCCAGCTCCCAGGGATCATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACCCCCTAAAGTGGCTCTaGGTTTTCCAGCTGCACACA | + |
Preference number: 2 (lower is better) Translates to: THTKSTGANLPSLVSLPHPLKWL*VFQLHT Trigger: TGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGG...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGTCCCAAGGACCTGCTTaGCTCTGCTCCCCAAGTGCA | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLSQGPA*LCSPSA Trigger: TGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGA...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACAACGGTTTTCTTCCCTaGACTTCTGCCCTCCTCTCG | + |
Preference number: 2 (lower is better) Translates to: THTKSTGANLPSLVSLPHNGFLP*TSALLS Trigger: CGAGAGGAGGGCAGAAGTGCAGGGAAGAAAACCGTT...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCGCCGTCTGACCTCTTaGCTCCCTCGCCCAGTTCTG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSRRLTS*LPRPVL Trigger: CAGAACTGGGCGAGGGAGGCAAGAGGTCAGACGGCG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR CCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGGGTCAGCAATGGGCCTaGGGTGGCTCCTTGCTGTGG | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMGQQWA*GGSLLW Trigger: CCACAGCAAGGAGCCACCCCAGGCCCATTGCTGACC...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR CCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCGGTCAGCAATGGGCCTaGGGTGGCTCCTTGCTGTGG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSGQQWA*GGSLLW Trigger: CCACAGCAAGGAGCCACCCCAGGCCCATTGCTGACC...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGAGGGGAGGTCAGCAATaGGCCTGGGGTGGCTCCTTG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWRGGQQ*AWGGSL Trigger: CAAGGAGCCACCCCAGGCCCATTGCTGACCTCCCCT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | GAGGAACAGACGCCGGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCATGGGGGAGGAGACTTTaGGCAGCAGGACGAAGAAAG | + |
Preference number: 2 (lower is better) Translates to: EEQTPGRFLKAPLTVKGAWGRRL*AAGRRK Trigger: CTTTCTTCGTCCTGCTGCTCAAAGTCTCCTCCCCCA...TGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCCGGCGTCTGTTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCCTCTGCTCCCCAAGTaGAGGGATGAGAGCCCGTCA | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWPLLPK*RDESPS Trigger: TGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAGG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGGCTGTAATCCCCACTTaGAGGGTCACTGGACCCTCT | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLAVIPT*RVTGPS Trigger: AGAGGGTCCAGTGACCCTCCAAGTGGGGATTACAGC...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTGGCCTTCTCCCTGCTaGAGGCCCAGCTCTGAACAC | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWWPSPC*RPSSEH Trigger: GTGTTCAGAGCTGGGCCTCCAGCAGGGAGAAGGCCA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 90 bp | GGAGGAGACTTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGGATaGTGGAGCTGCCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAG | + |
Preference number: 2 (lower is better) Translates to: GGDFEQQDEERKMSG*WSCLKAGQLSEPEK Trigger: CTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAAGTCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR-3UTR TCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGACACTAGATCATCCCTaGTGCTCAGATCCCTGGAGC | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLTLDHP*CSDPWS Trigger: GCTCCAGGGATCTGAGCATCAGGGATGATCTAGTGT...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTCTGAGTTTTCCAGCTaGACACACAGCCTTCCTAGG | + |
Preference number: 2 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSEFSS*THSLPR Trigger: CCTAGGAAGGCTGTGTGTGCAGCTGGAAAACTCAGA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGGTCTCACCTCCCAAGTaGTGGGATTATAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLVSPPK*WDYRLC Trigger: GCACAGCCTATAATCCCAGCACTTGGGAGGTGAGAC...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGTCCCAAGGACCTGCTTaGCTCTGCTCCCCAAGTGCA | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMSQGPA*LCSPSA Trigger: TGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGA...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTCCCAAGGACCTGCTTaGCTCTGCTCCCCAAGTGCA | + |
Preference number: 2 (lower is better) Translates to: DRVLSATESTSVPHDTENSQGPA*LCSPSA Trigger: TGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGAACGGTTTTCTTCCCTaGACTTCTGCCCTCCTCTCG | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLNGFLP*TSALLS Trigger: CGAGAGGAGGGCAGAAGTGCAGGGAAGAAAACCGTT...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCCAGAAGCCTCTCTCTaGAAGCACAGCCTGGAGGGT | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWPEASL*KHSLEG Trigger: ACCCTCCAGGCTGTGCTTCCAGAGAGAGGCTTCTGG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATCCAGAAGCCTCTCTCTaGAAGCACAGCCTGGAGGGT | + |
Preference number: 2 (lower is better) Translates to: DRVLSATESTSVPHDTENPEASL*KHSLEG Trigger: ACCCTCCAGGCTGTGCTTCCAGAGAGAGGCTTCTGG...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGCAAACCTCCCCAGCCTaGTCAGTCTGCCACACTGCT | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMQTSPA*SVCHTA Trigger: AGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTG...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGGCAATGGGCCTGGGGTaGCTCCTTGCTGTGGCAGTG | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFEAMGLG*LLAVAV Trigger: CACTGCCACAGCAAGGAGCCACCCCAGGCCCATTGC...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAAAGAGTTGTGGGGGGAGCTGCCTGAAAGCTaGGCAGCTCTCAGAACCAGA | + |
Preference number: 2 (lower is better) Translates to: GKILESPTNSKGSKELWGELPES*AALRTR Trigger: TCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTC...CCCCCACAACTCTTTGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR CAA 90 bp | TCTCGCTGTGTACATACAGTGTCAAAGGACGAACCCAGGGCTTCCTaGCAAGCTAAGCACCACGTTCTACCACTGAACTATGTCCTCAGG | + |
Preference number: 2 (lower is better) Translates to: SRCVHTVSKDEPRAS*QAKHHVLPLNYVLR Trigger: CCTGAGGACATAGTTCAGTGGTAGAACGTGGTGCTTAGCTTGCAAGGAAGCCCTGGGTTCGTCCTTTGACACTGTATGTACACAGCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGCCTAGGCTCAGGCCTTaGGCCCGGCTATTGTTACCC | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFEPRLRP*ARLLLP Trigger: GGGTAACAATAGCCGGGCTCAAGGCCTGAGCCTAGG...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGAGCAACGATATGAGCTaGGAGATTTGGTCCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLSNDMS*EIWSWS Trigger: GGACCAGGACCAAATCTCTCAGCTCATATCGTTGCT...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCCTGTTGCAGCTTCCTaGGTGCTGACATCACAGGTG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWPVAAS*VLTSQV Trigger: CACCTGTGATGTCAGCACTCAGGAAGCTGCAACAGG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCCTGTTGCAGCTTCCTaGGTGCTGACATCACAGGTG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSPVAAS*VLTSQV Trigger: CACCTGTGATGTCAGCACTCAGGAAGCTGCAACAGG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACCAAATAACTTCCTGTTaGAGCTTCCTGAGTGCTGAC | + |
Preference number: 2 (lower is better) Translates to: THTKSTGANLPSLVSLPHQITSC*SFLSAD Trigger: GTCAGCACTCAGGAAGCTGCAACAGGAAGTTATTTG...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGTCTTCCCTGCACTTCTaGCCTCCTCTCGCTGTGTAC | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMSSLHF*PPLAVY Trigger: GTACACAGCGAGAGGAGGGCAGAAGTGCAGGGAAGA...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 90 bp | GGTGGCTCACTTTGGTCCCTATCACTGTGCACTGACAAGGAGCCTTaGCATTTATTTTCTTGCTTCCCCACGAACATGGACCATCTCCTC | + |
Preference number: 2 (lower is better) Translates to: GGSLWSLSLCTDKEP*HLFSCFPTNMDHLL Trigger: GAGGAGATGGTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAGTGCACAGTGATAGGGACCAAAGTGAGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGGTGCTCTGCTATATGTaGAGACAGGGTCCCACTGTG | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMVLCYM*RQGPTV Trigger: CACAGTGGGACCCTGTCTTCACATATAGCAGAGCAC...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCGTGCTCTGCTATATGTaGAGACAGGGTCCCACTGTG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSVLCYM*RQGPTV Trigger: CACAGTGGGACCCTGTCTTCACATATAGCAGAGCAC...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTGCCAGAAAAGGGCATaGTCCCTGGGAGCTGGATGG | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFECQKRA*SLGAGW Trigger: CCATCCAGCTCCCAGGGATCATGCCCTTTTCTGGCA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGACTTCCTCTGCTACGTaGTTCCCACTAACCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWTSSAT*FPLTQL Trigger: GAGCTGGGTTAGTGGGAATCACGTAGCAGAGGAAGT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATATGAGAGCCCGTCACTaGTCCATCTGGTCATTTCCG | + |
Preference number: 2 (lower is better) Translates to: DRVLSATESTSVPHDTENMRARH*SIWSFP Trigger: CGGAAATGACCAGATGGAGCAGTGACGGGCTCTCAT...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGATGAGAGCCCGTCACTaGTCCATCTGGTCATTTCCG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWMRARH*SIWSFP Trigger: CGGAAATGACCAGATGGAGCAGTGACGGGCTCTCAT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAGGACCTGCTTGCCTCTaGTCCCCAAGTGCAGGGATG | + |
Preference number: 2 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLGPACL*SPSAGM Trigger: CATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCC...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGCCAGCCTGGTCAGTCTaGCACACTGCTTTGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMPAWSV*HTALCL Trigger: CAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGG...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTACCTGGGGTGGCTCCTTaGTGTGGCAGTGATACCTGC | + |
Preference number: 2 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLPGVAP*CGSDTC Trigger: GCAGGTATCACTGCCACAGCAAGGAGCCACCCCAGG...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGACTCTGAATCCCAAGTaGTGGGATTTCTCACGTTGC | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLTLNPK*WDFSRC Trigger: GCAACGTGAGAAATCCCAGCACTTGGGATTCAGAGT...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGCCAGAAGCCTCTCTCTaGAAGCACAGCCTGGAGGGT | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFEPEASL*KHSLEG Trigger: ACCCTCCAGGCTGTGCTTCCAGAGAGAGGCTTCTGG...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAGGTCAGCAATGGGCCTaGGGTGGCTCCTTGCTGTGG | + |
Preference number: 2 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRGQQWA*GGSLLW Trigger: CCACAGCAAGGAGCCACCCCAGGCCCATTGCTGACC...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCGAAGGGAGGACTAGATaGACAGATCCCATCCCCACA | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSEGRTR*TDPIPT Trigger: TGTGGGGATGGGATCTGTCCATCTAGTCCTCCCTTC...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCAAAGAATATGATGAGTaGGCACAAGTTGTAGCCGTT | + |
Preference number: 2 (lower is better) Translates to: PSDAPKVALSFPAAHTAFKEYDE*AQVVAV Trigger: AACGGCTACAACTTGTGCTCACTCATCATATTCTTT...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAGCAACGATATGAGCTaGGAGATTTGGTCCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSNDMS*EIWSWS Trigger: GGACCAGGACCAAATCTCTCAGCTCATATCGTTGCT...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAGCTCCCTTTGTCACCTaGGCACTACAGGGCACAGAC | + |
Preference number: 2 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLAPFVT*ALQGTD Trigger: GTCTGTGCCCTGTAGTGCTCAGGTGACAAAGGGAGC...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTCTCCACCCCAGCTGTaGTCTGCTATATGTGAAGAC | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSPPQL*SAICED Trigger: GTCTTCACATATAGCAGAGCACAGCTGGGGTGGAGA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTCTTCCCTGCACTTCTaGCCTCCTCTCGCTGTGTAC | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFESSLHF*PPLAVY Trigger: GTACACAGCGAGAGGAGGGCAGAAGTGCAGGGAAGA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCCAAGGCAGAAAGATTaGCCTGAGTCTGAGGCAAGT | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSPRQKD*PESEAS Trigger: ACTTGCCTCAGACTCAGGGCAATCTTTCTGCCTTGG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGAATATTAAAGGTGTGTaGCCCACGCCTGGCTCTGAG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWNIKGV*PTPGSE Trigger: CTCAGAGCCAGGCGTGGGGCACACACCTTTAATATT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAATATTAAAGGTGTGTaGCCCACGCCTGGCTCTGAG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSNIKGV*PTPGSE Trigger: CTCAGAGCCAGGCGTGGGGCACACACCTTTAATATT...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAAGGGGAGGTCAGCAATaGGCCTGGGGTGGCTCCTTG | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKRGGQQ*AWGGSL Trigger: CAAGGAGCCACCCCAGGCCCATTGCTGACCTCCCCT...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTCCCTCGCCCAGTTCTaGGACTGTAGACATGTACTA | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSLAQF*DCRHVL Trigger: TAGTACATGTCTACAGTCCCAGAACTGGGCGAGGGA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGCACCAGTGTCCCACATaGCACAGAAAATTTGGCCAA | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMHQCPT*HRKFGQ Trigger: TTGGCCAAATTTTCTGTGTCATGTGGGACACTGGTG...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCACCAGTGTCCCACATaGCACAGAAAATTTGGCCAA | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWHQCPT*HRKFGQ Trigger: TTGGCCAAATTTTCTGTGTCATGTGGGACACTGGTG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTCCTCCTATAGCTCTTaGCTGCTAACAGGCATGAGT | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWSSYSS*LLTGMS Trigger: ACTCATGCCTGTTAGCAGTCAAGAGCTATAGGAGGA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAGCAGGCCTCAAACTTaGGAAATTGCCAAGGATGAC | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSRPQT*EIAKDD Trigger: GTCATCCTTGGCAATTTCTCAAGTTTGAGGCCTGCT...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGGGACCTGCTTGCCTCTaGTCCCCAAGTGCAGGGATG | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWGPACL*SPSAGM Trigger: CATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCC...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGGTCAGTCTGCCACACTaGTTTGTGTTTGACAGAGTG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWVSLPH*FVFDRV Trigger: CACTCTGTCAAACACAAAGCAGTGTGGCAGACTGAC...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGCCAGCCTGGTCAGTCTaGCACACTGCTTTGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFEPAWSV*HTALCL Trigger: CAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGG...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACGCCGTCTGACCTCTTaGCTCCCTCGCCCAGTTCTG | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVRRLTS*LPRPVL Trigger: CAGAACTGGGCGAGGGAGGCAAGAGGTCAGACGGCG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGCCTGGCCTTCTCCCTaGTGGAGGCCCAGCTCTGAA | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVAWPSP*WRPSSE Trigger: TTCAGAGCTGGGCCTCCAGCAGGGAGAAGGCCAGGC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCAGCCATGTGGTCTCTaGTCTGACCTTGCAATAATG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWQPCGL*SDLAIM Trigger: CATTATTGCAAGGTCAGAGCAGAGACCACATGGCTG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGCAATGGGCCTGGGGTaGCTCCTTGCTGTGGCAGTG | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVAMGLG*LLAVAV Trigger: CACTGCCACAGCAAGGAGCCACCCCAGGCCCATTGC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | AGAGTTGTGGGGGAGGAGACTTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGAATCTGAGATTGCCCTaGGCTACTTTAGATACTGTC | + |
Preference number: 2 (lower is better) Translates to: RVVGEETLSSRTKKGRCLNLRLP*ATLDTV Trigger: GACAGTATCTAAAGTAGCCCAGGGCAATCTCAGATT...CAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAAGTCTCCTCCCCCACAACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR-3UTR TCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATGCCAGAAAAGGGCATaGTCCCTGGGAGCTGGATGG | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKCQKRA*SLGAGW Trigger: CCATCCAGCTCCCAGGGATCATGCCCTTTTCTGGCA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTGTGCTGTCTATATGTaGGTGTGGTGTACATGCATG | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWCAVYM*VWCTCM Trigger: CATGCATGTACACCACACTCACATATAGACAGCACA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAGTTCTCTCTCAACATaGGATTCTGAGCTGGGAATG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSSLST*DSELGM Trigger: CATTCCCAGCTCAGAATCTCATGTTGAGAGAGAACT...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCTGCAAGCTACTCTCTaGAACATCAGGACAGAAAGT | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSLQATL*NIRTES Trigger: ACTTTCTGTCCTGATGTTTCAGAGAGTAGCTTGCAG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGGACCTGCTTGCCTCTaGTCCCCAAGTGCAGGGATG | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVGPACL*SPSAGM Trigger: CATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGAGATCCACCTGTCTCTaGCTCCTGAGTGCAATATTA | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWRSTCL*LLSAIL Trigger: TAATATTGCACTCAGGAGGCAGAGACAGGTGGATCT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTCTGGAAGCACAGCCTaGAGGGTGCTGCTCTGCACA | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWSGSTA*RVLLCT Trigger: TGTGCAGAGCAGCACCCTCCAGGCTGTGCTTCCAGA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAGTCTCACCTCCCAAGTaGTGGGATTATAGGCTGTGC | + |
Preference number: 2 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRVSPPK*WDYRLC Trigger: GCACAGCCTATAATCCCAGCACTTGGGAGGTGAGAC...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTTGTGTTTGACAGAGTaGTCAGTGCTACAGAAAGCA | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWLCLTE*SVLQKA Trigger: TGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGTTGTGTTTGACAGAGTaGTCAGTGCTACAGAAAGCA | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMLCLTE*SVLQKA Trigger: TGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAA...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCAGAACCATGTTAACTaGCAAGCTCTTTCCAGGTTA | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWQNHVN*QALSRL Trigger: TAACCTGGAAAGAGCTTGGCAGTTAACATGGTTCTG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACACGCCTCCTCCCTGTaGTCCCACAACACTCTCTAC | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVHASSL*SHNTLY Trigger: GTAGAGAGTGTTGTGGGAGCACAGGGAGGAGGCGTG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAACTCAGAGACCTCATaGTCAAAAGTGACTTGGAAC | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSNSETS*SKVTWN Trigger: GTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTT...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGATTCAAAAGTGTACTTaGCACCTGTACAATAAGGCA | + |
Preference number: 2 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLIQKCT*HLYNKA Trigger: TGCCTTATTGTACAGGTGCCAAGTACACTTTTGAAT...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATAAAGAATATGATGAGTaGGCACAAGTTGTAGCCGTT | + |
Preference number: 2 (lower is better) Translates to: DRVLSATESTSVPHDTENKEYDE*AQVVAV Trigger: AACGGCTACAACTTGTGCTCACTCATCATATTCTTT...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGCCCCTAAAGTGGCTCTaGGTTTTCCAGCTGCACACA | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWPLKWL*VFQLHT Trigger: TGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGG...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACCTGTTGCAGCTTCCTaGGTGCTGACATCACAGGTG | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVPVAAS*VLTSQV Trigger: CACCTGTGATGTCAGCACTCAGGAAGCTGCAACAGG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGGTGCTCTGCTATATGTaGAGACAGGGTCCCACTGTG | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWVLCYM*RQGPTV Trigger: CACAGTGGGACCCTGTCTTCACATATAGCAGAGCAC...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAAAAGGCAGCCAGCCATaGTGGTGGCTCACTTTGGTC | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVKGSQP*WWLTLV Trigger: GACCAAAGTGAGCCACCATCATGGCTGGCTGCCTTT...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACATCAGGACAGAAAGTaGCCAGAGTTCACCACGTGC | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKHQDRK*PEFTTC Trigger: GCACGTGGTGAACTCTGGTCACTTTCTGTCCTGATG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGATCTCCACCCCAGCTGTaGTCTGCTATATGTGAAGAC | + |
Preference number: 2 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRSPPQL*SAICED Trigger: GTCTTCACATATAGCAGAGCACAGCTGGGGTGGAGA...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAATGAGAGCCCGTCACTaGTCCATCTGGTCATTTCCG | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKMRARH*SIWSFP Trigger: CGGAAATGACCAGATGGAGCAGTGACGGGCTCTCAT...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTGCTCAAAAGTGACTTaGAACAATGAAACTTGGTCC | + |
Preference number: 2 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWCSKVT*NNETWS Trigger: GGACCAAGTTTCATTGTTCCAAGTCACTTTTGAGCA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTAGCAACGATATGAGCTaGGAGATTTGGTCCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFSNDMS*EIWSWS Trigger: GGACCAGGACCAAATCTCTCAGCTCATATCGTTGCT...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTCTGAGTTTTCCAGCTaGACACACAGCCTTCCTAGG | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWSEFSS*THSLPR Trigger: CCTAGGAAGGCTGTGTGTGCAGCTGGAAAACTCAGA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCGAGGCTTCCTACAACTaGATCAATCTCATAAATCTA | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSEASYN*INLINL Trigger: TAGATTTATGAGATTGATGCAGTTGTAGGAAGCCTC...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTCTCCACCCCAGCTGTaGTCTGCTATATGTGAAGAC | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWSPPQL*SAICED Trigger: GTCTTCACATATAGCAGAGCACAGCTGGGGTGGAGA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAAAATCTGCCTGCCTCTaGCTCCCAAGTGCTGGGATT | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVKSACL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTT...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTGGTGTAAATTCATCTaGTCAAGTAGAGAACTGCAA | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSWCKFI*SSRELQ Trigger: TTGCAGTTCTCTACTTGAGCAGATGAATTTACACCA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGAAGGGAGGACTAGATaGACAGATCCCATCCCCACA | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVEGRTR*TDPIPT Trigger: TGTGGGGATGGGATCTGTCCATCTAGTCCTCCCTTC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACACTTGGAGGGTCACTaGACCCTCTTTTTGCCTATC | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKHLEGH*TLFLPI Trigger: GATAGGCAAAAAGAGGGTCCAGTGACCCTCCAAGTG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCGATAGTCACAAGAAATaGAGCACAAACTCCAAAAAG | + |
Preference number: 2 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSDSHKK*STNSKK Trigger: CTTTTTGGAGTTTGTGCTCCATTTCTTGTGACTATC...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGAAAGAATATGATGAGTaGGCACAAGTTGTAGCCGTT | + |
Preference number: 2 (lower is better) Translates to: GLQARGTMLRCLIFVVFEKEYDE*AQVVAV Trigger: AACGGCTACAACTTGTGCTCACTCATCATATTCTTT...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGCACCAGTGTCCCACATaGCACAGAAAATTTGGCCAA | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWHQCPT*HRKFGQ Trigger: TTGGCCAAATTTTCTGTGTCATGTGGGACACTGGTG...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATCCTCCTATAGCTCTTaGCTGCTAACAGGCATGAGT | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKSSYSS*LLTGMS Trigger: ACTCATGCCTGTTAGCAGTCAAGAGCTATAGGAGGA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTCAACATGAGATTCTaGGCTGGGAATGCAGAGCCT | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVLNMRF*AGNAEP Trigger: AGGCTCTGCATTCCCAGCTCAGAATCTCATGTTGAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTTTGTATGCAGTACCTaGAGTCTATACTTTCTTCTT | + |
Preference number: 2 (lower is better) Translates to: DRVLSATESTSVPHDTENFVCST*SLYFLL Trigger: AAGAAGAAAGTATAGACTGCAGGTACTGCATACAAA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGCTCTTTACAACTGTATaGTATCCTTTACTTTTCCTC | + |
Preference number: 2 (lower is better) Translates to: VVFETGSHNVVQAGLALMLFTTV*YPLLFL Trigger: GAGGAAAAGTAAAGGATAGCATACAGTTGTAAAGAG...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGACAATCCCTCTCTGAGTaGTTATTCCTCTCCCACTTT | + |
Preference number: 2 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRQSLSE*LFLSHF Trigger: AAAGTGGGAGAGGAATAAGCACTCAGAGAGGGATTG...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACAGCCATGTGGTCTCTaGTCTGACCTTGCAATAATG | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKQPCGL*SDLAIM Trigger: CATTATTGCAAGGTCAGAGCAGAGACCACATGGCTG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACCAGAGTTCACCACGTaGCTCAGTTCTTACAGCATT | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKPEFTT*LSSYSI Trigger: AATGCTGTAAGAACTGAGGCACGTGGTGAACTCTGG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAAGCAGGCCTCAAACTTaGGAAATTGCCAAGGATGAC | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVSRPQT*EIAKDD Trigger: GTCATCCTTGGCAATTTCTCAAGTTTGAGGCCTGCT...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACAAATAACTTCCTGTTaGAGCTTCCTGAGTGCTGAC | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKQITSC*SFLSAD Trigger: GTCAGCACTCAGGAAGCTGCAACAGGAAGTTATTTG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGACAGAACCATGTTAACTaGCAAGCTCTTTCCAGGTTA | + |
Preference number: 2 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRQNHVN*QALSRL Trigger: TAACCTGGAAAGAGCTTGGCAGTTAACATGGTTCTG...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 90 bp | GGTTTGTTAGAGTGGGTGCTAAGATCTGAATTTGGACCTTCAAATTaGTATATAGCAACAAGACAGCTGATCATTGTGCCTCATGCTGTA | + |
Preference number: 2 (lower is better) Translates to: GLLEWVLRSEFGPSN*YIATRQLIIVPHAV Trigger: TACAGCATGAGGCACAATGATCAGCTGTCTTGTTGCTATATACAAATTTGAAGGTCCAAATTCAGATCTTAGCACCCACTCTAACAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR TCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTATGCATGTTTTCTTCATaGTCACTAATCAGGAAACCT | + |
Preference number: 2 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLCMFSS*SLIRKP Trigger: AGGTTTCCTGATTAGTGATCATGAAGAAAACATGCA...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAGAGGCTTCCTACAACTaGATCAATCTCATAAATCTA | + |
Preference number: 2 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLEASYN*INLINL Trigger: TAGATTTATGAGATTGATGCAGTTGTAGGAAGCCTC...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAAACTCAGAGACCTCATaGTCAAAAGTGACTTGGAAC | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKNSETS*SKVTWN Trigger: GTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTT...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTATTGTGTTTGACAGAGTaGTCAGTGCTACAGAAAGCA | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVLCLTE*SVLQKA Trigger: TGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAA...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAAATTCACATCCTTCTTaGTTTTGGTCTCCTGGTAAG | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKNSHPS*FWSPGK Trigger: CTTACCAGGAGACCAAAAGCAAGAAGGATGTGAATT...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR-3UTR GCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTGAGGCTTCCTACAACTaGATCAATCTCATAAATCTA | + |
Preference number: 2 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFEASYN*INLINL Trigger: TAGATTTATGAGATTGATGCAGTTGTAGGAAGCCTC...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTGACAAGGAGCCTTTaGATTTATTTTCTTGCTTCC | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVLTRSL*IYFLAS Trigger: GGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACATGGTTTGTTAGAGTaGGTGCTAAGATCTGAATTT | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKHGLLE*VLRSEF Trigger: AAATTCAGATCTTAGCACCCACTCTAACAAACCATG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTTTGTATGCAGTACCTaGAGTCTATACTTTCTTCTT | + |
Preference number: 2 (lower is better) Translates to: FSNSETSCSKVTWNNETWFVCST*SLYFLL Trigger: AAGAAGAAAGTATAGACTGCAGGTACTGCATACAAA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTTTTGTATGCAGTACCTaGAGTCTATACTTTCTTCTT | + |
Preference number: 2 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFFVCST*SLYFLL Trigger: AAGAAGAAAGTATAGACTGCAGGTACTGCATACAAA...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACTCTTTACAACTGTATaGTATCCTTTACTTTTCCTC | + |
Preference number: 2 (lower is better) Translates to: TCVEFRNYLPSPNPREVKLFTTV*YPLLFL Trigger: GAGGAAAAGTAAAGGATAGCATACAGTTGTAAAGAG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAACAAATACACTAATGTaGACGCAGCAAAGGGATATA | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVTNTLM*TQQRDI Trigger: TATATCCCTTTGCTGCGTGCACATTAGTGTATTTGT...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTCTTTACAACTGTATaGTATCCTTTACTTTTCCTC | + |
Preference number: 2 (lower is better) Translates to: EDREDHNFLLLTSLITCVLFTTV*YPLLFL Trigger: GAGGAAAAGTAAAGGATAGCATACAGTTGTAAAGAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | AGAGGGGAGGTCAGCAATGGGCCTGGGGTGGCTCCTTaGTGTGGCAGTGATACCTGCTCCCTTTGTCACCTG | + |
Preference number: 3 (lower is better) Translates to: RGEVSNGPGVAP*CGSDTCSLCHL Trigger: CAGGTGACAAAGGGAGCAGGTATCACTGCCACAGCAAGGAGCCACCCCAGGCCCATTGCTGACCTCCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CCTACCCAGCCAGGGTCTCACTGTACAGCCCTAGGCTaGCTGGAACTCAGAGATCCACCTGTCTCTGCCTCC | + |
Preference number: 3 (lower is better) Translates to: PTQPGSHCTALG*LELRDPPVSAS Trigger: GGAGGCAGAGACAGGTGGATCTCTGAGTTCCAGGCAGCCTAGGGCTGTACAGTGAGACCCTGGCTGGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | AAGGACCTGCTTGCCTCTGCTCCCCAAGTGCAGGGATaGGAGCCCGTCACTGCTCCATCTGGTCATTTCCGG | + |
Preference number: 3 (lower is better) Translates to: KDLLASAPQVQG*EPVTAPSGHFR Trigger: CCGGAAATGACCAGATGGAGCAGTGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | CAGCAATGGGCCTGGGGTGGCTCCTTGCTGTGGCAGTaGTACCTGCTCCCTTTGTCACCTGAGCACTACAGG | + |
Preference number: 3 (lower is better) Translates to: QQWAWGGSLLWQ*YLLPLSPEHYR Trigger: CCTGTAGTGCTCAGGTGACAAAGGGAGCAGGTATCACTGCCACAGCAAGGAGCCACCCCAGGCCCATTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | AGAATCCCAAGGACCTGCTTGCCTCTGCTCCCCAAGTaGAGGGATGAGAGCCCGTCACTGCTCCATCTGGTC | + |
Preference number: 3 (lower is better) Translates to: RIPRTCLPLLPK*RDESPSLLHLV Trigger: GACCAGATGGAGCAGTGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTATCCCAAGGACCTGCTaGCCTCTGCTCCCCAAGTGC | + |
Preference number: 3 (lower is better) Translates to: TKSTGANLPSLVSLPHCFIPRTC*PLLPKC Trigger: GCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGAT...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GCAGACGGATCCTCAACCTCACACGCCTCCTCCCTGTaGTCCCACAACACTCTCTACACACTAGATCATCCC | + |
Preference number: 3 (lower is better) Translates to: ADGSSTSHASSL*SHNTLYTLDHP Trigger: GGGATGATCTAGTGTGTAGAGAGTGTTGTGGGAGCACAGGGAGGAGGCGTGTGAGGTTGAGGATCCGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | CTTGCTGTGGCAGTGATACCTGCTCCCTTTGTCACCTaGGCACTACAGGGCACAGACTCCATGGCCACACTA | + |
Preference number: 3 (lower is better) Translates to: LAVAVIPAPFVT*ALQGTDSMATL Trigger: TAGTGTGGCCATGGAGTCTGTGCCCTGTAGTGCTCAGGTGACAAAGGGAGCAGGTATCACTGCCACAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTaGTTTGTGTTTGACAGAGTGCTCAGTGCTACAGAA | + |
Preference number: 3 (lower is better) Translates to: GANLPSLVSLPH*FVFDRVLSATE Trigger: TTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | TCTCCCTGCTGGAGGCCCAGCTCTGAACACTTCCTCTaGTACGTGATTCCCACTAACCCAGCTCCACTAATC | + |
Preference number: 3 (lower is better) Translates to: SPCWRPSSEHFL*YVIPTNPAPLI Trigger: GATTAGTGGAGCTGGGTTAGTGGGAATCACGTAGCAGAGGAAGTGTTCAGAGCTGGGCCTCCAGCAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | AGGGTCCCACTGTGTAGCCTTGCCTGGCCTGGAACTTaGTACGTAGACCACATGGCCTTGAACTCAACAGAG | + |
Preference number: 3 (lower is better) Translates to: RVPLCSLAWPGT*YVDHMALNSTE Trigger: CTCTGTTGAGTTCAAGGCCATGTGGTCTACGTACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | GGTCTGAGTAATCCTGCTAGGCTGGAACTGACCCTGTaGGCCAGGCTAGTTAGAATCCCAAGGACCTGCTTG | + |
Preference number: 3 (lower is better) Translates to: GLSNPARLELTL*ARLVRIPRTCL Trigger: CAAGCAGGTCCTTGGGATTCTAACTAGCCTGGCCCACAGGGTCAGTTCCAGCCTAGCAGGATTACTCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | CACTGTGAAAAGAATCCTGGGCTACCCACCCCTACATaGCCTTGGCAGAAGGACACATTGAGCAAGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: HCEKNPGLPTPT*PWQKDTLSKAR Trigger: CCTGGCCTTGCTCAATGTGTCCTTCTGCCAAGGCCATGTAGGGGTGGGTAGCCCAGGATTCTTTTCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTGAACCCAGGGCTTCCTaGCAAGCTAAGCACCACGTT | + |
Preference number: 3 (lower is better) Translates to: TKSTGANLPSLVSLPHCFEPRAS*QAKHHV Trigger: AACGTGGTGCTTAGCTTGCAAGGAAGCCCTGGGTTC...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | TACCCACCCCTACATGGCCTTGGCAGAAGGACACATTaGGCAAGGCCAGGGAGCAGAGTTGCTACTGTAACA | + |
Preference number: 3 (lower is better) Translates to: YPPLHGLGRRTH*ARPGSRVATVT Trigger: TGTTACAGTAGCAACTCTGCTCCCTGGCCTTGCTCAATGTGTCCTTCTGCCAAGGCCATGTAGGGGTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTCTGCTCCCCAAGTGCAGGGATGAGAGCCCGTCACTaGTCCATCTGGTCATTTCCGGGTTTTTGCTGTTAT | + |
Preference number: 3 (lower is better) Translates to: LCSPSAGMRARH*SIWSFPGFCCY Trigger: ATAACAGCAAAAACCCGGAAATGACCAGATGGAGCAGTGACGGGCTCTCATCCCTGCACTTGGGGAGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CCTAGGCTGCCTGGAACTCAGAGATCCACCTGTCTCTaGCTCCTGAGTGCAATATTAAAGGTGTGTGCCCCA | + |
Preference number: 3 (lower is better) Translates to: PRLPGTQRSTCL*LLSAILKVCAP Trigger: TGGGGCACACACCTTTAATATTGCACTCAGGAGGCAGAGACAGGTGGATCTCTGAGTTCCAGGCAGCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | TCAACAGAGATCTGCCTGTGTCTACTTCCCGAGTGCTaGAACTCAAGGCATGTGTCACCACATCTGGCCCTC | + |
Preference number: 3 (lower is better) Translates to: STEICLCLLPEC*NSRHVSPHLAL Trigger: GAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGACACAGGCAGATCTCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | GCCTTGCACTCATGTCAACCCTCCTCCTATAGCTCTTaGCTGCTAACAGGCATGAGTACCGTGCCCAGCTAT | + |
Preference number: 3 (lower is better) Translates to: ALHSCQPSSYSS*LLTGMSTVPSY Trigger: ATAGCTGGGCACGGTACTCATGCCTGTTAGCAGTCAAGAGCTATAGGAGGAGGGTTGACATGAGTGCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | AACTCAACAGAGATCTGCCTGTGTCTACTTCCCGAGTaGTGGAACTCAAGGCATGTGTCACCACATCTGGCC | + |
Preference number: 3 (lower is better) Translates to: NSTEICLCLLPE*WNSRHVSPHLA Trigger: GGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGACACAGGCAGATCTCTGTTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTAGCACCCCATTTCCTGGGTGTCTCAGAAGAGCGCTaGAAACAGAAGAATCCACAGCAGACGGATCCTCAA | + |
Preference number: 3 (lower is better) Translates to: LAPHFLGVSEER*KQKNPQQTDPQ Trigger: TTGAGGATCCGTCTGCTGTGGATTCTTCTGTTTGCAGCGCTCTTCTGAGACACCCAGGAAATGGGGTGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTGCTCCAGAAAGGAAGGCGGCTGAGCAGCCTTTGGTaGAAACAGGAGATAAGCAAAAGCCCGTATATCCGA | + |
Preference number: 3 (lower is better) Translates to: LLQKGRRLSSLW*KQEISKSPYIR Trigger: TCGGATATACGGGCTTTTGCTTATCTCCTGTTTGCACCAAAGGCTGCTCAGCCGCCTTCCTTTCTGGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR CCA 72 bp | CTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTaGTCAGTCTGCCACACTGCTTTGTGTTTGACAGAG | + |
Preference number: 3 (lower is better) Translates to: LTLNQQGQTSPA*SVCHTALCLTE Trigger: CTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | GGTATAAAGGCAGCCAGCCATGATGGTGGCTCACTTTaGTCCCTATCACTGTGCACTGACAAGGAGCCTTTG | + |
Preference number: 3 (lower is better) Translates to: GIKAASHDGGSL*SLSLCTDKEPL Trigger: CAAAGGCTCCTTGTCAGTGCACAGTGATAGGGACCAAAGTGAGCCACCATCATGGCTGGCTGCCTTTATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | ACCAGAGTTCACCACGTGCCTCAGTTCTTACAGCATTaGAAGTGGCTGATGTTAGGGGATGTCCACCTTGGC | + |
Preference number: 3 (lower is better) Translates to: TRVHHVPQFLQH*KWLMLGDVHLG Trigger: GCCAAGGTGGACATCCCCTAACATCAGCCACTTCCAATGCTGTAAGAACTGAGGCACGTGGTGAACTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGTCCCACTGTGTAGCCTaGCCTGGCCTGGAACTTGGT | + |
Preference number: 3 (lower is better) Translates to: VVFETGSHNVVQAGLALMSHCVA*PGLELG Trigger: ACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGA...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTCCCACTGTGTAGCCTaGCCTGGCCTGGAACTTGGT | + |
Preference number: 3 (lower is better) Translates to: DRVLSATESTSVPHDTENSHCVA*PGLELG Trigger: ACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGTTTGGTCCTGGTCCTTaGGTCCCTCAGATGCCCCTA | + |
Preference number: 3 (lower is better) Translates to: VVFETGSHNVVQAGLALMFGPGP*VPQMPL Trigger: TAGGGGCATCTGAGGGACCAAAGGACCAGGACCAAA...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGGAACCCAGGGCTTCCTaGCAAGCTAAGCACCACGTT | + |
Preference number: 3 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWEPRAS*QAKHHV Trigger: AACGTGGTGCTTAGCTTGCAAGGAAGCCCTGGGTTC...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | GGGGTTTTCTTCAACAGGTATAAAGGCAGCCAGCCATaGTGGTGGCTCACTTTGGTCCCTATCACTGTGCAC | + |
Preference number: 3 (lower is better) Translates to: GVFFNRYKGSQP*WWLTLVPITVH Trigger: GTGCACAGTGATAGGGACCAAAGTGAGCCACCATCATGGCTGGCTGCCTTTATACCTGTTGAAGAAAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | TGGTCAGTCTGCCACACTGCTTTGTGTTTGACAGAGTaGTCAGTGCTACAGAAAGCACCAGTGTCCCACATG | + |
Preference number: 3 (lower is better) Translates to: WSVCHTALCLTE*SVLQKAPVSHM Trigger: CATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | TACGTTACCCATCACCTACCCCAATCCCTCTCTGAGTaGTTATTCCTCTCCCACTTTGGTGTAAGCAGGCCT | + |
Preference number: 3 (lower is better) Translates to: YVTHHLPQSLSE*LFLSHFGVSRP Trigger: AGGCCTGCTTACACCAAAGTGGGAGAGGAATAAGCACTCAGAGAGGGATTGGGGTAGGTGATGGGTAACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GTAATCCCCACTTGGAGGGTCACTGGACCCTCTTTTTaGCTATCCATTGAGCCATTTCTCCAGCCGCATCTT | + |
Preference number: 3 (lower is better) Translates to: VIPTWRVTGPSF*LSIEPFLQPHL Trigger: AAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGAGGGTCCAGTGACCCTCCAAGTGGGGATTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | ACAGTCCTAGCACTCAAGAGGCCAAGGCAGAAAGATTaGCCTGAGTCTGAGGCAAGTCTGAGCTACAGAGTA | + |
Preference number: 3 (lower is better) Translates to: TVLALKRPRQKD*PESEASLSYRV Trigger: TACTCTGTAGCTCAGACTTGCCTCAGACTCAGGGCAATCTTTCTGCCTTGGCCTCTTGAGTGCTAGGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTGTGCACTGACAAGGAGCCTTTGCATTTATTTTCTTaGTTCCCCACGAACATGGACCATCTCCTCGGGCCT | + |
Preference number: 3 (lower is better) Translates to: LCTDKEPLHLFS*FPTNMDHLLGP Trigger: AGGCCCGAGGAGATGGTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAGTGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CAGGACGAAGAAAGGAAGATGTCTGGATTGTGGAGCTaGCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAG | + |
Preference number: 3 (lower is better) Translates to: QDEERKMSGLWS*LKAGQLSEPEK Trigger: CTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTTTCTGCCTGTTCACTaGAGACAGCGTCTCTCCCTG | + |
Preference number: 3 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSFLPVH*RQRLSL Trigger: CAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | AAGCTGCCAGACAACTTGAAAAACAAGAGGACACTGTaGAAAGAATCCTGGGCTACCCACCCCTACATGGCC | + |
Preference number: 3 (lower is better) Translates to: KLPDNLKNKRTL*KESWATHPYMA Trigger: GGCCATGTAGGGGTGGGTAGCCCAGGATTCTTTTCACAGTGTCCTCTTGTTTTTCAAGTTGTCTGGCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CCTGAGTTTAAGTCTGCTGTCAACGGTTTTCTTCCCTaGACTTCTGCCCTCCTCTCGCTGTGTACATACAGT | + |
Preference number: 3 (lower is better) Translates to: PEFKSAVNGFLP*TSALLSLCTYS Trigger: ACTGTATGTACACAGCGAGAGGAGGGCAGAAGTGCAGGGAAGAAAACCGTTGACAGCAGACTTAAACTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GTGGTCCATGTTGCCCTAGAGTACATCTCACTGTATTaGCTAGAAGTCTCATCTGAGACCCCCAGTGATCCT | + |
Preference number: 3 (lower is better) Translates to: VVHVALEYISLY*LEVSSETPSDP Trigger: AGGATCACTGGGGGTCTCAGATGAGACTTCTAGGCAATACAGTGAGATGTACTCTAGGGCAACATGGACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GTATATAGCAACAAGACAGCTGATCATTGTGCCTCATaGTGTAATCCCCACTTGGAGGGTCACTGGACCCTC | + |
Preference number: 3 (lower is better) Translates to: VYSNKTADHCAS*CNPHLEGHWTL Trigger: GAGGGTCCAGTGACCCTCCAAGTGGGGATTACAGCATGAGGCACAATGATCAGCTGTCTTGTTGCTATATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | CAGCTGATCATTGTGCCTCATGCTGTAATCCCCACTTaGAGGGTCACTGGACCCTCTTTTTGCCTATCCATT | + |
Preference number: 3 (lower is better) Translates to: QLIIVPHAVIPT*RVTGPSFCLSI Trigger: AATGGATAGGCAAAAAGAGGGTCCAGTGACCCTCCAAGTGGGGATTACAGCATGAGGCACAATGATCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | GTTCACCACGTGCCTCAGTTCTTACAGCATTGGAAGTaGCTGATGTTAGGGGATGTCCACCTTGGCATTCTT | + |
Preference number: 3 (lower is better) Translates to: VHHVPQFLQHWK*LMLGDVHLGIL Trigger: AAGAATGCCAAGGTGGACATCCCCTAACATCAGCCACTTCCAATGCTGTAAGAACTGAGGCACGTGGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGGAACCCAGGGCTTCCTaGCAAGCTAAGCACCACGTT | + |
Preference number: 3 (lower is better) Translates to: GLQARGTMLRCLIFVVFEEPRAS*QAKHHV Trigger: AACGTGGTGCTTAGCTTGCAAGGAAGCCCTGGGTTC...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTTTCTCTGTGTAGCCTaGGCTGTCCTGGAACTCACT | + |
Preference number: 3 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSFLCVA*AVLELT Trigger: AGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | ATTCTACGTTACCCATCACCTACCCCAATCCCTCTCTaGGTGCTTATTCCTCTCCCACTTTGGTGTAAGCAG | + |
Preference number: 3 (lower is better) Translates to: ILRYPSPTPIPL*VLIPLPLWCKQ Trigger: CTGCTTACACCAAAGTGGGAGAGGAATAAGCACTCAGAGAGGGATTGGGGTAGGTGATGGGTAACGTAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | ACGAAGAAAGGAAGATGTCTGGATTGTGGAGCTGCCTaGAAGCTGGGCAGCTCTCAGAACCAGAAAAGATCT | + |
Preference number: 3 (lower is better) Translates to: TKKGRCLDCGAA*KLGSSQNQKRS Trigger: AGATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR GCA 72 bp | ATGTGCACGCAGCAAAGGGATATAAAAACTGTCTGTTaGCAGGTGCCTTTAATTCCAGCACTTGGGAGGTGG | + |
Preference number: 3 (lower is better) Translates to: MCTQQRDIKTVC*QVPLIPALGRW Trigger: CCACCTCCCAAGTGCTGGAATTAAAGGCACCTGGCAACAGACAGTTTTTATATCCCTTTGCTGCGTGCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | TGGATATACACACATGCCAGAAAAGGGCATGATCCCTaGGAGCTGGATGGACATGTAATTGTGAGCAGCTTG | + |
Preference number: 3 (lower is better) Translates to: WIYTHARKGHDP*ELDGHVIVSSL Trigger: CAAGCTGCTCACAATTACATGTCCATCCAGCTCCCAGGGATCATGCCCTTTTCTGGCATGTGTGTATATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | CCAAGTGCAGGGATGAGAGCCCGTCACTGCTCCATCTaGTCATTTCCGGGTTTTTGCTGTTATTTTGAGAAA | + |
Preference number: 3 (lower is better) Translates to: PSAGMRARHCSI*SFPGFCCYFEK Trigger: TTTCTCAAAATAACAGCAAAAACCCGGAAATGACCAGATGGAGCAGTGACGGGCTCTCATCCCTGCACTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCTCAAACTTGAGAAATaGCCAAGGATGACTCTCGCC | + |
Preference number: 3 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSLKLEK*PRMTLA Trigger: GGCGAGAGTCATCCTTGGCAATTTCTCAAGTTTGAG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATCCCACTGTGTAGCCTaGCCTGGCCTGGAACTTGGT | + |
Preference number: 3 (lower is better) Translates to: TCVEFRNYLPSPNPREVKSHCVA*PGLELG Trigger: ACCAAGTTCCAGGCCAGGCAAGGCTACACAGTGGGA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCTCCAGCCGCATCTTTaGTTTCTAAGATACTGCCTT | + |
Preference number: 3 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSLQPHL*FLRYCL Trigger: AAGGCAGTATCTTAGAAACAAAAGATGCGGCTGGAG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | AGAGTTGTGGGGGAGGAGACTTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGATTCAAAATCTGAGATaGCCCTGGGCTACTTTAGAT | + |
Preference number: 3 (lower is better) Translates to: RVVGEETLSSRTKKGRCLIQNLR*PWATLD Trigger: ATCTAAAGTAGCCCAGGGCAATCTCAGATTTTGAAT...CAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAAGTCTCCTCCCCCACAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR TCA 72 bp | ATGTGTGTGGATATACACACATGCCAGAAAAGGGCATaGTCCCTGGGAGCTGGATGGACATGTAATTGTGAG | + |
Preference number: 3 (lower is better) Translates to: MCVDIHTCQKRA*SLGAGWTCNCE Trigger: CTCACAATTACATGTCCATCCAGCTCCCAGGGATCATGCCCTTTTCTGGCATGTGTGTATATCCACACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | TTCTCTTGCACTAAGATCCCACACTGTAGCCTAGGCTaGCCTGTAACTCACAATGGAGTTCAAGCTGGCTTT | + |
Preference number: 3 (lower is better) Translates to: FSCTKIPHCSLG*PVTHNGVQAGF Trigger: AAAGCCAGCTTGAACTCCATTGTGAGTTACAGGTCAGCCTAGGCTACAGTGTGGGATCTTAGTGCAAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | TTGGAGGGTCACTGGACCCTCTTTTTGCCTATCCATTaGGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAG | + |
Preference number: 3 (lower is better) Translates to: LEGHWTLFLPIH*AISPAASFVSK Trigger: CTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGAGGGTCCAGTGACCCTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | CACCTTGGCATTCTTAGAATGAGTTCTCTCTCAACATaGGATTCTGAGCTGGGAATGCAGAGCCTAGGCCAT | + |
Preference number: 3 (lower is better) Translates to: HLGILRMSSLST*DSELGMQSLGH Trigger: ATGGCCTAGGCTCTGCATTCCCAGCTCAGAATCTCATGTTGAGAGAGAACTCATTCTAAGAATGCCAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | ATGGTGGCTCAGTCTGTAATCTTAGTACATGGGAGATaGAGGCATAAGGATTGCTGTGAGTCCTGGGCTAGT | + |
Preference number: 3 (lower is better) Translates to: MVAQSVILVHGR*RHKDCCESWAS Trigger: ACTAGCCCAGGACTCACAGCAATCCTTATGCCTTCATCTCCCATGTACTAAGATTACAGACTGAGCCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | TTTGGTCCCTATCACTGTGCACTGACAAGGAGCCTTTaGATTTATTTTCTTGCTTCCCCACGAACATGGACC | + |
Preference number: 3 (lower is better) Translates to: FGPYHCALTRSL*IYFLASPRTWT Trigger: GGTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAGTGCACAGTGATAGGGACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | AGCCATGATGGTGGCTCACTTTGGTCCCTATCACTGTaGACTGACAAGGAGCCTTTGCATTTATTTTCTTGC | + |
Preference number: 3 (lower is better) Translates to: SHDGGSLWSLSL*TDKEPLHLFSC Trigger: GCAAGAAAATAAATGCAAAGGCTCCTTGTCAGTGCACAGTGATAGGGACCAAAGTGAGCCACCATCATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | AGCCTTTGCATTTATTTTCTTGCTTCCCCACGAACATaGACCATCTCCTCGGGCCTCAACTTCCTTAATGCT | + |
Preference number: 3 (lower is better) Translates to: SLCIYFLASPRT*TISSGLNFLNA Trigger: AGCATTAAGGAAGTTGAGGCCCGAGGAGATGGTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTTTGGTCCTGGTCCTTaGGTCCCTCAGATGCCCCTA | + |
Preference number: 3 (lower is better) Translates to: FSNSETSCSKVTWNNETWFGPGP*VPQMPL Trigger: TAGGGGCATCTGAGGGACCAAAGGACCAGGACCAAA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | ACTAGATGGACAGATCCCATCCCCACAGATACTACTTaGGATAACGAGGTGGTTAGGTACAGTTATCCTCTG | + |
Preference number: 3 (lower is better) Translates to: TRWTDPIPTDTT*DNEVVRYSYPL Trigger: CAGAGGATAACTGTACCTAACCACCTCGTTATCTCAAGTAGTATCTGTGGGGATGGGATCTGTCCATCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | CTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATaGAACTTGGTCCTCCTTAAAGGTGGAAAGAAGCCC | + |
Preference number: 3 (lower is better) Translates to: LRDLMLKSDLEQ*NLVLLKGGKKP Trigger: GGGCTTCTTTCCACCTTTAAGGAGGACCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | GCCCGTCACTGCTCCATCTGGTCATTTCCGGGTTTTTaGTGTTATTTTGAGAAAGATCTCACTGAAGCCAAA | + |
Preference number: 3 (lower is better) Translates to: ARHCSIWSFPGF*CYFEKDLTEAK Trigger: TTTGGCTTCAGTGAGATCTTTCTCAAAATAACAGCAAAAACCCGGAAATGACCAGATGGAGCAGTGACGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | ATCTCACTGAAGCCAAAGCTGATCTTTAACTTACAGTaGTCTTCCGTCTCACCTCCCAAGTGCTGGGATTAT | + |
Preference number: 3 (lower is better) Translates to: ISLKPKLIFNLQ*SSVSPPKCWDY Trigger: ATAATCCCAGCACTTGGGAGGTGAGACGGAAGACCACTGTAAGTTAAAGATCAGCTTTGGCTTCAGTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | ACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTaGTCCTCCTTAAAGGTGGAAAGAAGCCCTGCTCAG | + |
Preference number: 3 (lower is better) Translates to: TSCSKVTWNNET*SSLKVERSPAQ Trigger: CTGAGCAGGGCTTCTTTCCACCTTTAAGGAGGACCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTATAAAAACTGTCTGTaGCCAGGTGCCTTTAATTCC | + |
Preference number: 3 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSYKNCL*PGAFNS Trigger: GGAATTAAAGGCACCTGGCAACAGACAGTTTTTATA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | AGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTaGGACAGGTTCACACAATGTAGTTCAGGCTGGCCT | + |
Preference number: 3 (lower is better) Translates to: RHNAQVSNFCGF*DRFTQCSSGWP Trigger: AGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | TTCATCTGCTCAAGTAGAGAACTGCAAGCTACTCTCTaGAACATCAGGACAGAAAGTGACCAGAGTTCACCA | + |
Preference number: 3 (lower is better) Translates to: FICSSRELQATL*NIRTESDQSSP Trigger: TGGTGAACTCTGGTCACTTTCTGTCCTGATGTTTCAGAGAGTAGCTTGCAGTTCTCTACTTGAGCAGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CCA 72 bp | ACAGGTGCACCTGAGACCATGCATGGTTTGTTAGAGTaGGTGCTAAGATCTGAATTTGGACCTTCAAATTTG | + |
Preference number: 3 (lower is better) Translates to: TGAPETMHGLLE*VLRSEFGPSNL Trigger: CAAATTTGAAGGTCCAAATTCAGATCTTAGCACCCACTCTAACAAACCATGCATGGTCTCAGGTGCACCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGGTCTGCCACACTGCTTaGTGTTTGACAGAGTGCTCA | + |
Preference number: 3 (lower is better) Translates to: FSNSETSCSKVTWNNETWVCHTA*CLTECS Trigger: TGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGAC...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATTGCAGTCCTGGGGATaGAACCCAGGACCTCATAAA | + |
Preference number: 3 (lower is better) Translates to: TCVEFRNYLPSPNPREVKLQSWG*NPGPHK Trigger: TTTATGAGGTCCTGGGTTCAATCCCCAGGACTGCAA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTATTTCTGCCTGTTCACTaGAGACAGCGTCTCTCCCTG | + |
Preference number: 3 (lower is better) Translates to: EDREDHNFLLLTSLITCVFLPVH*RQRLSL Trigger: CAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAA...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATTTCTCTGTGTAGCCTaGGCTGTCCTGGAACTCACT | + |
Preference number: 3 (lower is better) Translates to: TCVEFRNYLPSPNPREVKFLCVA*AVLELT Trigger: AGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | AGCAAGGCCAGGGAGCAGAGTTGCTACTGTAACAGTTaGCATAGCAAGATGTCAGAAACTAAGTGGAAATAT | + |
Preference number: 3 (lower is better) Translates to: SKAREQSCYCNS*HSKMSETKWKY Trigger: ATATTTCCACTTAGTTTCTGACATCTTGCTATGTCAACTGTTACAGTAGCAACTCTGCTCCCTGGCCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | GTGTTGTGCACTAGTGATCCAGGGCACACATGTGCATaGATTCTAAGGCATGTTCCTCCAAATTGTAACATT | + |
Preference number: 3 (lower is better) Translates to: VLCTSDPGHTCA*ILRHVPPNCNI Trigger: AATGTTACAATTTGGAGGAACATGCCTTAGAATTCATGCACATGTGTGCCCTGGATCACTAGTGCACAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR GCA 72 bp | ACTGTCTGTCTCTCCTTTTCTAACTCAGAGACCTCATaGTCAAAAGTGACTTGGAACAATGAAACTTGGTCC | + |
Preference number: 3 (lower is better) Translates to: TVCLSFSNSETS*SKVTWNNETWS Trigger: GGACCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAAGGAGAGACAGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTTTTTGCCTATCCATaGAGCCATTTCTCCAGCCGC | + |
Preference number: 3 (lower is better) Translates to: EDREDHNFLLLTSLITCVLFAYP*SHFSSR Trigger: GCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTAACTCTGAATCCCAAGTGCTGGGATTTCTCACGTTaGCCTGTGCTTGACTATTCAATAATAATCTCTAAC | + |
Preference number: 3 (lower is better) Translates to: LTLNPKCWDFSR*PVLDYSIIISN Trigger: GTTAGAGATTATTATTGAATAGTCAAGCACAGGGCAACGTGAGAAATCCCAGCACTTGGGATTCAGAGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTCAAACTTGAGAAATaGCCAAGGATGACTCTCGCC | + |
Preference number: 3 (lower is better) Translates to: EDREDHNFLLLTSLITCVLKLEK*PRMTLA Trigger: GGCGAGAGTCATCCTTGGCAATTTCTCAAGTTTGAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | GTAGGGTCTATAATTCCCTGTATTAATCTACAGCCCTaGCTTAACACTGTATTCCTGAAAGCAGCTTTACTG | + |
Preference number: 3 (lower is better) Translates to: VGSIIPCINLQP*LNTVFLKAALL Trigger: CAGTAAAGCTGCTTTCAGGAATACAGTGTTAAGTCAGGGCTGTAGATTAATACAGGGAATTATAGACCCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | CTTTTCAGTAGGTTAACTAGGGAGAACTTGTGTGCCTaGTCTTTACAACTGTATGCTATCCTTTACTTTTCC | + |
Preference number: 3 (lower is better) Translates to: LFSRLTRENLCA*SLQLYAILYFS Trigger: GGAAAAGTAAAGGATAGCATACAGTTGTAAAGAGCAGGCACACAAGTTCTCCCTAGTTAACCTACTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATACTTATTTGGGCGTTaGTGTGTGCTGTCTATATGT | + |
Preference number: 3 (lower is better) Translates to: TCVEFRNYLPSPNPREVKYLFGR*CVLSIC Trigger: ACATATAGACAGCACACACAAACGCCCAAATAAGTA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | GACCATGCATGGTTTGTTAGAGTGGGTGCTAAGATCTaGATTTGGACCTTCAAATTTGTATATAGCAACAAG | + |
Preference number: 3 (lower is better) Translates to: DHAWFVRVGAKI*IWTFKFVYSNK Trigger: CTTGTTGCTATATACAAATTTGAAGGTCCAAATTCAGATCTTAGCACCCACTCTAACAAACCATGCATGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR GCA 72 bp | TCCTTTACTTTTCCTCAAGAGGAGGCTTCCTACAACTaGATCAATCTCATAAATCTAAGGCATATTTTCAGG | + |
Preference number: 3 (lower is better) Translates to: SFTFPQEEASYN*INLINLRHIFR Trigger: CCTGAAAATATGCCTTAGATTTATGAGATTGATGCAGTTGTAGGAAGCCTCCTCTTGAGGAAAAGTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATTAATTTCTACTTATTaGGGCGTTTGTGTGTGCTGT | + |
Preference number: 3 (lower is better) Translates to: TCVEFRNYLPSPNPREVKLISTY*GVCVCC Trigger: ACAGCACACACAAACGCCCAAATAAGTAGAAATTAA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR TCA 72 bp | TCAGTCTATTTTGAGCCAAAAATGATTCTATACCTCTaGAACACTGCAACAAATTATCCCACTAATCAAGGT | + |
Preference number: 3 (lower is better) Translates to: SVYFEPKMILYL*NTATNYPTNQG Trigger: ACCTTGATTAGTGGGATAATTTGTTGCAGTGTTTCAGAGGTATAGAATCATTTTTGGCTCAAAATAGACTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | CTGTGGGCCAGGCTAGTTAGAATCCCAAGGACCTGCTaGCCTCTGCTCCCCAAGTGCAGGGATGAGAGCCCG | + |
Preference number: 4 (lower is better) Translates to: LWARLVRIPRTC*PLLPKCRDESP Trigger: CGGGCTCTCATCCCTGCACTTGGGGAGCAGAGGCAAGCAGGTCCTTGGGATTCTAACTAGCCTGGCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTCGACGACATCCCGGTaGTGGTGCTCTGTGGCCCAG | + |
Preference number: 4 (lower is better) Translates to: THTKSTGANLPSLVSLPHSTTSR*WCSVAQ Trigger: CTGGGCCACAGAGCACCATCACCGGGATGTCGTCGA...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GAGGAACAGACGCCGGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCATCGACGACATCCCGGTaGTGGTGCTCTGTGGCCCAG | + |
Preference number: 4 (lower is better) Translates to: EEQTPGRFLKAPLTVKGASTTSR*WCSVAQ Trigger: CTGGGCCACAGAGCACCATCACCGGGATGTCGTCGA...TGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCCGGCGTCTGTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR TCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACGTCTCCTCTGCAACCTaGCCAGCAGGCACAGTTAGA | + |
Preference number: 4 (lower is better) Translates to: THTKSTGANLPSLVSLPHVSSAT*PAGTVR Trigger: TCTAACTGTGCCTGCTGGTCAGGTTGCAGAGGAGAC...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | CTACCCACCCCTACATGGCCTTGGCAGAAGGACACATaGAGCAAGGCCAGGGAGCAGAGTTGCTACTGTAAC | + |
Preference number: 4 (lower is better) Translates to: LPTPTWPWQKDT*SKAREQSCYCN Trigger: GTTACAGTAGCAACTCTGCTCCCTGGCCTTGCTCAATGTGTCCTTCTGCCAAGGCCATGTAGGGGTGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGTACTGGGCTGCAAGGTaGAGCGGTGATGTTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLYWAAR*SGDVPS Trigger: GCTCGGAACATCACCGCTTCACCTTGCAGCCCAGTA...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTCAGCTGCAGCCATATaGAAAGGGGTCCTGTCCACT | + |
Preference number: 4 (lower is better) Translates to: THTKSTGANLPSLVSLPHSAAAI*KGVLST Trigger: AGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGA...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGGGTGATGGTGCTCTGTaGCCCAGTGCAGAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLGDGAL*PSAELS Trigger: TGACAGCTCTGCACTGGGCCACAGAGCACCATCACC...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTCACAGGGTTAGCCACTaGGTTGGCTCTCTCGTGGTT | + |
Preference number: 4 (lower is better) Translates to: TKSTGANLPSLVSLPHCFHRVSH*VGSLVV Trigger: AACCACGAGAGAGCCAACCCAGTGGCTAACCCTGTG...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | CCCTGGGAGCTGGATGGACATGTAATTGTGAGCAGCTaGACTCGGGTGCTAGGAATGGAACCCAGGTTCTCT | + |
Preference number: 4 (lower is better) Translates to: PWELDGHVIVSS*TRVLGMEPRFS Trigger: AGAGAACCTGGGTTCCATTCCTAGCACCCGAGTCAAGCTGCTCACAATTACATGTCCATCCAGCTCCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAAAGAGTTGTGGGGGCGAGCCAGTCTGTGGTaGATGGAGCCCCATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: GKILESPTNSKGSKELWGRASLW*MEPHLP Trigger: TGGCAAATGGGGCTCCATTCACCACAGACTGGCTCG...CCCCCACAACTCTTTGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR TCA 90 bp | GGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAAAGAGTTGTGGGGGTACTGGGCTGCAAGGTaGAGCGGTGATGTTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: GKILESPTNSKGSKELWGYWAAR*SGDVPS Trigger: GCTCGGAACATCACCGCTTCACCTTGCAGCCCAGTA...CCCCCACAACTCTTTGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR GCA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCGAATGGAGCCCCATTTaGCATCAGTGTCCTCACTTC | + |
Preference number: 4 (lower is better) Translates to: PSDAPKVALSFPAAHTAFEWSPI*HQCPHF Trigger: GAAGTGAGGACACTGATGGCAAATGGGGCTCCATTC...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | CAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTaGTGTTTGACAGAGTGCTCAGTGCTACAGAAAGCA | + |
Preference number: 4 (lower is better) Translates to: QTSPAWSVCHTA*CLTECSVLQKA Trigger: TGCTTTCTGTAGCACTGAGCACTCTGTCAAACACAAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | GACCAGAGTTCACCACGTGCCTCAGTTCTTACAGCATaGGAAGTGGCTGATGTTAGGGGATGTCCACCTTGG | + |
Preference number: 4 (lower is better) Translates to: DQSSPRASVLTA*EVADVRGCPPW Trigger: CCAAGGTGGACATCCCCTAACATCAGCCACTTCCAATGCTGTAAGAACTGAGGCACGTGGTGAACTCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTACTGGGCTGCAAGGTaGAGCGGTGATGTTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWYWAAR*SGDVPS Trigger: GCTCGGAACATCACCGCTTCACCTTGCAGCCCAGTA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSSSTM*TCPSAA Trigger: TGCAGCTGATGGACATGTTCACATCGTGGAACTGCT...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTGAATGGAGCCCCATTTaGCATCAGTGTCCTCACTTC | + |
Preference number: 4 (lower is better) Translates to: STSRVLELKACVTTSGPLEWSPI*HQCPHF Trigger: GAAGTGAGGACACTGATGGCAAATGGGGCTCCATTC...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACGAGCTGAGGTTGCTTTaGTGTTGGCTGAAGAGACAA | + |
Preference number: 4 (lower is better) Translates to: THTKSTGANLPSLVSLPHELRLL*CWLKRQ Trigger: TTGTCTCTTCAGCCAACACCAAAGCAACCTCAGCTC...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGATGGTGATGACCCTCTaGCCTCCACTCCCCACCACT | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWMVMTL*PPLPTT Trigger: AGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCAT...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCCATCTCTGCCATCCTTaGTCTCTTCACCAATGGCAA | + |
Preference number: 4 (lower is better) Translates to: PSDAPKVALSFPAAHTAFHLCHP*SLHQWQ Trigger: TTGCCATTGGTGAAGAGACCAAGGATGGCAGAGATG...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTGGTGTCTGTACTCCTaGGCTCTTCGGTTGGCCTCC | + |
Preference number: 4 (lower is better) Translates to: DRVLSATESTSVPHDTENWCLYS*ALRLAS Trigger: GGAGGCCAACCGAAGAGCCCAGGAGTACAGACACCA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTCTTTCTTGAGGAGCTaGTGTCTGTACTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSFLRS*CLYSWA Trigger: AGCCCAGGAGTACAGACACCAGCTCCTCAAGAAAGA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTATCGACGACATCCCGGTaGTGGTGCTCTGTGGCCCAG | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLSTTSR*WCSVAQ Trigger: CTGGGCCACAGAGCACCATCACCGGGATGTCGTCGA...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GTCCTCCATTACTTTCTGCCTGTTCACTTGAGACAGCGTCTCTCCCTGAACCTGTGCTTTGGTGTTGGCTaGAGAGACAAAGCTAGCGAG | + |
Preference number: 4 (lower is better) Translates to: VLHYFLPVHLRQRLSLNLCFGVG*RDKASE Trigger: CTCGCTAGCTTTGTCTCTTCAGCCAACACCAAAGCA...CAGGTTCAGGGAGAGACGCTGTCTCAAGTGAACAGGCAGAAAGTAATGGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGGCCTCCAGCAGGGAGTaGTGTTTGGATGTTACCCAG | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWASSRE*CLDVTQ Trigger: CTGGGTAACATCCAAACATCACTCCCTGCTGGAGGC...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GTGGTTTTTGAGACAGGTTCACACAATGTAGTTCAGGCTGGCCTTGCACTCATGGCCTCCAGCAGGGAGTaGTGTTTGGATGTTACCCAG | + |
Preference number: 4 (lower is better) Translates to: VVFETGSHNVVQAGLALMASSRE*CLDVTQ Trigger: CTGGGTAACATCCAAACATCACTCCCTGCTGGAGGC...CATGAGTGCAAGGCCAGCCTGAACTACATTGTGTGAACCTGTCTCAAAAACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGGTCTCCTCTGCAACCTaGCCAGCAGGCACAGTTAGA | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWVSSAT*PAGTVR Trigger: TCTAACTGTGCCTGCTGGTCAGGTTGCAGAGGAGAC...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | GGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAAAGAGTTGTGGGGGTCAGCTGCAGCCATATaGAAAGGGGTCCTGTCCACT | + |
Preference number: 4 (lower is better) Translates to: GKILESPTNSKGSKELWGSAAAI*KGVLST Trigger: AGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGA...CCCCCACAACTCTTTGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR CCA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTCATCTCTGCCATCCTTaGTCTCTTCACCAATGGCAA | + |
Preference number: 4 (lower is better) Translates to: STSRVLELKACVTTSGPLHLCHP*SLHQWQ Trigger: TTGCCATTGGTGAAGAGACCAAGGATGGCAGAGATG...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | TTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGGATaGTGGAGCTGCCTGAAAGCTGGGCAGCTCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: FEQQDEERKMSG*WSCLKAGQLSE Trigger: TTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCACAATCCAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR TCA 90 bp | ACTCACACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTTCTGCATTGCTTCCTaGAGCATGACCAAAATCTCA | + |
Preference number: 4 (lower is better) Translates to: THTKSTGANLPSLVSLPHFCIAS*SMTKIS Trigger: TGAGATTTTGGTCATGCTTCAGGAAGCAATGCAGAA...GTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGTGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | TGGAGCTGCCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAGATCTGTAGTCTTGAATGGAGCCCCATTTaGCATCAGTGTCCTCACTTC | + |
Preference number: 4 (lower is better) Translates to: WSCLKAGQLSEPEKICSLEWSPI*HQCPHF Trigger: GAAGTGAGGACACTGATGGCAAATGGGGCTCCATTC...AAGACTACAGATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
3UTR CAA 72 bp | ACAGCTGATCATTGTGCCTCATGCTGTAATCCCCACTaGGAGGGTCACTGGACCCTCTTTTTGCCTATCCAT | + |
Preference number: 4 (lower is better) Translates to: TADHCASCCNPH*EGHWTLFLPIH Trigger: ATGGATAGGCAAAAAGAGGGTCCAGTGACCCTCCAAGTGGGGATTACAGCATGAGGCACAATGATCAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTGCAAGGTGAAGCGGTaGTGTTCCGAGCCAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFECKVKR*CSEPVC Trigger: ACAGACTGGCTCGGAACATCACCGCTTCACCTTGCA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTTCCATTTCTTCTAAATaGGCTGAGGTTGCTTTGGTG | + |
Preference number: 4 (lower is better) Translates to: STSRVLELKACVTTSGPLSISSK*AEVALV Trigger: CACCAAAGCAACCTCAGCTCATTTAGAAGAAATGGA...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGGTCTCCTCTGCAACCTaGCCAGCAGGCACAGTTAGA | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFEVSSAT*PAGTVR Trigger: TCTAACTGTGCCTGCTGGTCAGGTTGCAGAGGAGAC...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR TCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTCCTTCCTGACTTCATaGCTTGTGTTGCTCTTTCTA | + |
Preference number: 4 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSFLTS*LVLLFL Trigger: TAGAAAGAGCAACACAAGTCATGAAGTCAGGAAGGA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGGTTACAATAAATGGCTaGCCAATGCCTCCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWVTING*PMPPAG Trigger: CCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAAC...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTGGTCTCTTCACCAATaGCAATTTCTCTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: TKSTGANLPSLVSLPHCFWSLHQ*QFLFFL Trigger: GAGGAAGAAGAGAAATTGCCATTGGTGAAGAGACCA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGTCTTTCTTGAGGAGCTaGTGTCTGTACTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWSFLRS*CLYSWA Trigger: AGCCCAGGAGTACAGACACCAGCTCCTCAAGAAAGA...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CAA 72 bp | GTACATACAGTGTCAAAGGACGAACCCAGGGCTTCCTaGCAAGCTAAGCACCACGTTCTACCACTGAACTAT | + |
Preference number: 4 (lower is better) Translates to: VHTVSKDEPRAS*QAKHHVLPLNY Trigger: ATAGTTCAGTGGTAGAACGTGGTGCTTAGCTTGCAAGGAAGCCCTGGGTTCGTCCTTTGACACTGTATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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3UTR CAA 72 bp | TGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTaGTTTCTAAGATACTGCCTTCGTGTAGCCCGGGAT | + |
Preference number: 4 (lower is better) Translates to: CLSIEPFLQPHL*FLRYCLRVARD Trigger: ATCCCGGGCTACACGAAGGCAGTATCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR GCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCTTCATGACTTGTGTTaGTCTTTCTACCTCGTCCCC | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWLHDLC*SFYLVP Trigger: GGGGACGAGGTAGAAAGAGCAACACAAGTCATGAAG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAATGGTGATGACCCTCTaGCCTCCACTCCCCACCACT | + |
Preference number: 4 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRMVMTL*PPLPTT Trigger: AGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCAT...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCATCTCTGCCATCCTTaGTCTCTTCACCAATGGCAA | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWHLCHP*SLHQWQ Trigger: TTGCCATTGGTGAAGAGACCAAGGATGGCAGAGATG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGCGAGCCAGTCTGTGGTaGATGGAGCCCCATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWRASLW*MEPHLP Trigger: TGGCAAATGGGGCTCCATTCACCACAGACTGGCTCG...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTACTGGGCTGCAAGGTaGAGCGGTGATGTTCCGAGC | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWYWAAR*SGDVPS Trigger: GCTCGGAACATCACCGCTTCACCTTGCAGCCCAGTA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTATCAGCTGCAGCCATATaGAAAGGGGTCCTGTCCACT | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLSAAAI*KGVLST Trigger: AGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGA...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTCCTGGAGCTGTTGCTaGAGTAGCTCTCTTTCACTG | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFESWSCC*SSSLSL Trigger: CAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAGGTGATGGTGCTCTGTaGCCCAGTGCAGAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: TCVEFRNYLPSPNPREVKGDGAL*PSAELS Trigger: TGACAGCTCTGCACTGGGCCACAGAGCACCATCACC...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGATGGTGATGACCCTCTaGCCTCCACTCCCCACCACT | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWMVMTL*PPLPTT Trigger: AGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCAT...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | CCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCAAAGACAAGAGCCATGGCATAGTTACAATAAATaGCTGGCCAATGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PTNYVPVPGKAFQRQEPWHSYNK*LANASS Trigger: GCTGGAGGCATTGGCCAGCCATTTATTGTAACTATG...CCATGGCTCTTGTCTTTGGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTGGTGTCTGTACTCCTaGGCTCTTCGGTTGGCCTCC | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWWCLYS*ALRLAS Trigger: GGAGGCCAACCGAAGAGCCCAGGAGTACAGACACCA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTCTTTCTTGAGGAGCTaGTGTCTGTACTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFESFLRS*CLYSWA Trigger: AGCCCAGGAGTACAGACACCAGCTCCTCAAGAAAGA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | AATGTGCACGCAGCAAAGGGATATAAAAACTGTCTGTaGCCAGGTGCCTTTAATTCCAGCACTTGGGAGGTG | + |
Preference number: 4 (lower is better) Translates to: NVHAAKGYKNCL*PGAFNSSTWEV Trigger: CACCTCCCAAGTGCTGGAATTAAAGGCACCTGGCAACAGACAGTTTTTATATCCCTTTGCTGCGTGCACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | CTTTGGTCCCTATCACTGTGCACTGACAAGGAGCCTTaGCATTTATTTTCTTGCTTCCCCACGAACATGGAC | + |
Preference number: 4 (lower is better) Translates to: LWSLSLCTDKEP*HLFSCFPTNMD Trigger: GTCCATGTTCGTGGGGAAGCAAGAAAATAAATGCAAAGGCTCCTTGTCAGTGCACAGTGATAGGGACCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACGAGCCAGTCTGTGGTaGATGGAGCCCCATTTGCCA | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVRASLW*MEPHLP Trigger: TGGCAAATGGGGCTCCATTCACCACAGACTGGCTCG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLSSSTM*TCPSAA Trigger: TGCAGCTGATGGACATGTTCACATCGTGGAACTGCT...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTTCTGCATTGCTTCCTaGAGCATGACCAAAATCTCA | + |
Preference number: 4 (lower is better) Translates to: DRVLSATESTSVPHDTENFCIAS*SMTKIS Trigger: TGAGATTTTGGTCATGCTTCAGGAAGCAATGCAGAA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GACAGAGTGCTCAGTGCTACAGAAAGCACCAGTGTCCCACATGACACAGAAAATTCCATTTCTTCTAAATaGGCTGAGGTTGCTTTGGTG | + |
Preference number: 4 (lower is better) Translates to: DRVLSATESTSVPHDTENSISSK*AEVALV Trigger: CACCAAAGCAACCTCAGCTCATTTAGAAGAAATGGA...ATTTTCTGTGTCATGTGGGACACTGGTGCTTTCTGTAGCACTGAGCACTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTCCATTTCTTCTAAATaGGCTGAGGTTGCTTTGGTG | + |
Preference number: 4 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSSISSK*AEVALV Trigger: CACCAAAGCAACCTCAGCTCATTTAGAAGAAATGGA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | TGGAGCTGCCTGAAAGCTGGGCAGCTCTCAGAACCAGAAAAGATCTGTAGTCTTAACACACCTGAAGCATaGCCAAAATCTCAGTATTGT | + |
Preference number: 4 (lower is better) Translates to: WSCLKAGQLSEPEKICSLNTPEA*PKSQYC Trigger: ACAATACTGAGATTTTGGTCATGCTTCAGGTGTGTT...AAGACTACAGATCTTTTCTGGTTCTGAGAGCTGCCCAGCTTTCAGGCAGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGGTGATGGTGCTCTGTaGCCCAGTGCAGAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVGDGAL*PSAELS Trigger: TGACAGCTCTGCACTGGGCCACAGAGCACCATCACC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGATGCTTTGGTGTTGGCTaGAGAGACAAAGCTAGCGAG | + |
Preference number: 4 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRCFGVG*RDKASE Trigger: CTCGCTAGCTTTGTCTCTTCAGCCAACACCAAAGCA...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAAAGAGTTGTGGGGGATAAAGAAACACACCTaGAGCATGACCAAAATCTCA | + |
Preference number: 4 (lower is better) Translates to: GKILESPTNSKGSKELWGIKKHT*SMTKIS Trigger: TGAGATTTTGGTCATGCTTCAGGTGTGTTTCTTTAT...CCCCCACAACTCTTTGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAGAATGGAGCCCCATTTaGCATCAGTGTCCTCACTTC | + |
Preference number: 4 (lower is better) Translates to: SFCLSIEPFLQPHLLFLREWSPI*HQCPHF Trigger: GAAGTGAGGACACTGATGGCAAATGGGGCTCCATTC...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTCAGCTGCAGCCATATaGAAAGGGGTCCTGTCCACT | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWSAAAI*KGVLST Trigger: AGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTGCCTCCTGGAGCTGTTaGTGCAGTAGCTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFASWSC*CSSSLS Trigger: TGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGC...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAAGCCTCCTGGAGCTGTTaGTGCAGTAGCTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: TCVEFRNYLPSPNPREVKASWSC*CSSSLS Trigger: TGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGC...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | GTCATCTTTAATTACATTCAAAATCTGAGATTGCCCTGGGCTACTTTAGATACTGGTGATGGTGCTCTGTaGCCCAGTGCAGAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: VIFNYIQNLRLPWATLDTGDGAL*PSAELS Trigger: TGACAGCTCTGCACTGGGCCACAGAGCACCATCACC...AGTATCTAAAGTAGCCCAGGGCAATCTCAGATTTTGAATGTAATTAAAGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR CCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAGAGCTGAGGTTGCTTTaGTGTTGGCTGAAGAGACAA | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLELRLL*CWLKRQ Trigger: TTGTCTCTTCAGCCAACACCAAAGCAACCTCAGCTC...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | GTCATCTTTAATTACATTCAAAATCTGAGATTGCCCTGGGCTACTTTAGATACTTGCAAGGTGAAGCGGTaGTGTTCCGAGCCAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: VIFNYIQNLRLPWATLDTCKVKR*CSEPVC Trigger: ACAGACTGGCTCGGAACATCACCGCTTCACCTTGCA...AGTATCTAAAGTAGCCCAGGGCAATCTCAGATTTTGAATGTAATTAAAGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
||
CDS-3UTR TCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTCCTTCCTGACTTCATaGCTTGTGTTGCTCTTTCTA | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFESFLTS*LVLLFL Trigger: TAGAAAGAGCAACACAAGTCATGAAGTCAGGAAGGA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGTCGAAGGAGCACTTCTaGTGTGGAATAATGACCATA | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFESKEHF*CGIMTI Trigger: TATGGTCATTATTCCACAGCAGAAGTGCTCCTTCGA...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGGTAGCTCTCTTTCACTaGCTTCCTTCATTTCCTCAA | + |
Preference number: 4 (lower is better) Translates to: GLQARGTMLRCLIFVVFEVALFH*LPSFPQ Trigger: TTGAGGAAATGAAGGAAGGCAGTGAAAGAGAGCTAC...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTCCTGGAGCTGTTGCTaGAGTAGCTCTCTTTCACTG | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWSWSCC*SSSLSL Trigger: CAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGCCTCCTGGAGCTGTTaGTGCAGTAGCTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVASWSC*CSSSLS Trigger: TGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTGTTACAATAAATGGCTaGCCAATGCCTCCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFVTING*PMPPAG Trigger: CCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAAC...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR TCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVSSSTM*TCPSAA Trigger: TGCAGCTGATGGACATGTTCACATCGTGGAACTGCT...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTATCCTGGAGCTGTTGCTaGAGTAGCTCTCTTTCACTG | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVSWSCC*SSSLSL Trigger: CAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGA...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR GCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACTTCATGACTTGTGTTaGTCTTTCTACCTCGTCCCC | + |
Preference number: 4 (lower is better) Translates to: TCVEFRNYLPSPNPREVKLHDLC*SFYLVP Trigger: GGGGACGAGGTAGAAAGAGCAACACAAGTCATGAAG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGTTACAATAAATGGCTaGCCAATGCCTCCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVVTING*PMPPAG Trigger: CCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAAC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTATGGTCTCTTCACCAATaGCAATTTCTCTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLWSLHQ*QFLFFL Trigger: GAGGAAGAAGAGAAATTGCCATTGGTGAAGAGACCA...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR TCA 90 bp | GTCATCTTTAATTACATTCAAAATCTGAGATTGCCCTGGGCTACTTTAGATACTAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: VIFNYIQNLRLPWATLDTSSSTM*TCPSAA Trigger: TGCAGCTGATGGACATGTTCACATCGTGGAACTGCT...AGTATCTAAAGTAGCCCAGGGCAATCTCAGATTTTGAATGTAATTAAAGATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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CDS-3UTR TCA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTATTGCTTCCTGAAGCATaGCCAAAATCTCAGTATTGT | + |
Preference number: 4 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLLLPEA*PKSQYC Trigger: ACAATACTGAGATTTTGGTCATGCTTCAGGAAGCAA...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR GCA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAGTAGCTCTCTTTCACTaGCTTCCTTCATTTCCTCAA | + |
Preference number: 4 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRVALFH*LPSFPQ Trigger: TTGAGGAAATGAAGGAAGGCAGTGAAAGAGAGCTAC...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR GCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACTTCATGACTTGTGTTaGTCTTTCTACCTCGTCCCC | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVLHDLC*SFYLVP Trigger: GGGGACGAGGTAGAAAGAGCAACACAAGTCATGAAG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGAGCTGAGGTTGCTTTaGTGTTGGCTGAAGAGACAA | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVELRLL*CWLKRQ Trigger: TTGTCTCTTCAGCCAACACCAAAGCAACCTCAGCTC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTCATAGTTACAATAAATaGCTGGCCAATGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFHSYNK*LANASS Trigger: GCTGGAGGCATTGGCCAGCCATTTATTGTAACTATG...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATTCTGCATTGCTTCCTaGAGCATGACCAAAATCTCA | + |
Preference number: 4 (lower is better) Translates to: TCVEFRNYLPSPNPREVKFCIAS*SMTKIS Trigger: TGAGATTTTGGTCATGCTTCAGGAAGCAATGCAGAA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAATCCTTCCTGACTTCATaGCTTGTGTTGCTCTTTCTA | + |
Preference number: 4 (lower is better) Translates to: TCVEFRNYLPSPNPREVKSFLTS*LVLLFL Trigger: TAGAAAGAGCAACACAAGTCATGAAGTCAGGAAGGA...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACATAGTTACAATAAATaGCTGGCCAATGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: EDREDHNFLLLTSLITCVHSYNK*LANASS Trigger: GCTGGAGGCATTGGCCAGCCATTTATTGTAACTATG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR CCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTGGTCTCTTCACCAATaGCAATTTCTCTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWWSLHQ*QFLFFL Trigger: GAGGAAGAAGAGAAATTGCCATTGGTGAAGAGACCA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | GAGTGGGTGCTAAGATCTGAATTTGGACCTTCAAATTaGTATATAGCAACAAGACAGCTGATCATTGTGCCT | + |
Preference number: 4 (lower is better) Translates to: EWVLRSEFGPSN*YIATRQLIIVP Trigger: AGGCACAATGATCAGCTGTCTTGTTGCTATATACAAATTTGAAGGTCCAAATTCAGATCTTAGCACCCACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS-3UTR TCA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGTTGCTTCCTGAAGCATaGCCAAAATCTCAGTATTGT | + |
Preference number: 4 (lower is better) Translates to: FSNSETSCSKVTWNNETWLLPEA*PKSQYC Trigger: ACAATACTGAGATTTTGGTCATGCTTCAGGAAGCAA...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
3UTR CAA 72 bp | TCACATCCTGTCTATAAGACGTTTAAATATTGTTTTTaGCAGTCCTGGGGATTGAACCCAGGACCTCATAAA | + |
Preference number: 4 (lower is better) Translates to: SHPVYKTFKYCF*QSWGLNPGPHK Trigger: TTTATGAGGTCCTGGGTTCAATCCCCAGGACTGCAAAAAACAATATTTAAACGTCTTATAGACAGGATGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
||
CDS TCA 90 bp | TCCTCAACTACGGTGACATCAACTTCAACTCCGTTGGTCTGCTGCTaGGCCATAGCCTCCAGCCTGAGCCGATACTGCTCGGCCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: SSTTVTSTSTPLVCC*AIASSLSRYCSASC Trigger: GCAGGAGGCCGAGCAGTATCGGCTCAGGCTGGAGGCTATGGCTCAGCAGCAGACCAACGGAGTTGAAGTTGATGTCACCGTAGTTGAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: TKSTGANLPSLVSLPHCFGVLST*VRASLL Trigger: TAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCC...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCTCCACTCCCCACCACTaGCTGGGTCGAGGAGTCAAG | + |
Preference number: 5 (lower is better) Translates to: PSDAPKVALSFPAAHTAFSTPHH*LGRGVK Trigger: CTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGA...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 90 bp | ATGTTACCCAGAGGGACTCCATCAGTCACGATGGTGATGACCCTCTaGCCTCCACTCCCCACCACTTGCTGGGTCGAGGAGTCAAGAGAA | + |
Preference number: 5 (lower is better) Translates to: MLPRGTPSVTMVMTL*PPLPTTCWVEESRE Trigger: TTCTCTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCATCGTGACTGATGGAGTCCCTCTGGGTAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GAGGAACAGACGCCGGGAAGATTCTTGAAAGCCCCACTAACAGTAAAGGGAGCAGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: EEQTPGRFLKAPLTVKGAGVLST*VRASLL Trigger: TAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCC...TGCTCCCTTTACTGTTAGTGGGGCTTTCAAGAATCTTCCCGGCGTCTGTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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CDS-3UTR CAA 90 bp | ACTAAATCAACAGGGGCAAACCTCCCCAGCCTGGTCAGTCTGCCACACTGCTTTTCCACTCCCCACCACTaGCTGGGTCGAGGAGTCAAG | + |
Preference number: 5 (lower is better) Translates to: TKSTGANLPSLVSLPHCFSTPHH*LGRGVK Trigger: CTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGA...AAAGCAGTGTGGCAGACTGACCAGGCTGGGGAGGTTTGCCCCTGTTGATTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 90 bp | TTGAGGAGCTGGTGTCTGTACTCCTGGGCTCTTCGGTTGGCCTCCTaGAGCTGTTGCTGCAGTAGCTCTCTTTCACTGCCTTCCTTCATT | + |
Preference number: 5 (lower is better) Translates to: LRSWCLYSWALRLAS*SCCCSSSLSLPSFI Trigger: AATGAAGGAAGGCAGTGAAAGAGAGCTACTGCAGCAACAGCTCCAGGAGGCCAACCGAAGAGCCCAGGAGTACAGACACCAGCTCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | AGAGTTGTGGGGGAGGAGACTTTGAGCAGCAGGACGAAGAAAGGAAGATGTCTGCGTCTTGGCCTTTCCTaGCAGCTTCTAGCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: RVVGEETLSSRTKKGRCLRLGLS*QLLAAS Trigger: AGAGGCTGCTAGAAGCTGCAAGGAAAGGCCAAGACG...CAGACATCTTCCTTTCTTCGTCCTGCTGCTCAAAGTCTCCTCCCCCACAACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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CDS-3UTR CAA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTCCTCACTTCATCGTCTaGGCCTTTCCTTGCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: STSRVLELKACVTTSGPLPHFIV*AFPCSF Trigger: GAAGCTGCAAGGAAAGGCCAAGACGATGAAGTGAGG...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 90 bp | AGAGGTGAAGATGAACGGAGCAGTCACAGTCACAGGGTTAGCCACTaGGTTGGCTCTCTCGTGGTTAGTGTTCACCTGATTCTGCATTGC | + |
Preference number: 5 (lower is better) Translates to: RGEDERSSHSHRVSH*VGSLVVSVHLILHC Trigger: GCAATGCAGAATCAGGTGAACACTAACCACGAGAGAGCCAACCCAGTGGCTAACCCTGTGACTGTGACTGCTCCGTTCATCTTCACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCTTTCCTCAACCCTGTTaGTCATCTCTGCCATCCTTG | + |
Preference number: 5 (lower is better) Translates to: PSDAPKVALSFPAAHTAFFPQPC*SSLPSL Trigger: CAAGGATGGCAGAGATGACAAACAGGGTTGAGGAAA...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS TCA 90 bp | TTTGCGTTCACATCTGCACCACTCCTAACAAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCAGCCATATGCAAAGGGGTCCTGTCC | + |
Preference number: 5 (lower is better) Translates to: FAFTSAPLLTSSSTM*TCPSAAAICKGVLS Trigger: GGACAGGACCCCTTTGCATATGGCTGCAGCTGATGGACATGTTCACATCGTGGAACTGCTTGTTAGGAGTGGTGCAGATGTGAACGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 90 bp | GTTACAATAAATGGCTGGCCAATGCCTCCAGCAGGGAGTGATGTTTaGATGTTACCCAGAGGGACTCCATCAGTCACGATGGTGATGACC | + |
Preference number: 5 (lower is better) Translates to: VTINGWPMPPAGSDV*MLPRGTPSVTMVMT Trigger: GGTCATCACCATCGTGACTGATGGAGTCCCTCTGGGTAACATCCAAACATCACTCCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCCGTCTTGGCCTTTCCTaGCAGCTTCTAGCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSRLGLS*QLLAAS Trigger: AGAGGCTGCTAGAAGCTGCAAGGAAAGGCCAAGACG...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTCTAAATGAGCTGAGGTaGCTTTGGTGTTGGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: STSRVLELKACVTTSGPLLNELR*LWCWLK Trigger: CTTCAGCCAACACCAAAGCAACCTCAGCTCATTTAG...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTTTTCCTCAACCCTGTTaGTCATCTCTGCCATCCTTG | + |
Preference number: 5 (lower is better) Translates to: STSRVLELKACVTTSGPLFPQPC*SSLPSL Trigger: CAAGGATGGCAGAGATGACAAACAGGGTTGAGGAAA...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGAGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRGVLST*VRASLL Trigger: TAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCC...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS TCA 90 bp | TTGCATAGTTACAATAAATGGCTGGCCAATGCCTCCAGCAGGGAGTaGTGTTTGGATGTTACCCAGAGGGACTCCATCAGTCACGATGGT | + |
Preference number: 5 (lower is better) Translates to: LHSYNKWLANASSRE*CLDVTQRDSISHDG Trigger: ACCATCGTGACTGATGGAGTCCCTCTGGGTAACATCCAAACATCACTCCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAACTATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGCGTCTTGGCCTTTCCTaGCAGCTTCTAGCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: GLQARGTMLRCLIFVVFERLGLS*QLLAAS Trigger: AGAGGCTGCTAGAAGCTGCAAGGAAAGGCCAAGACG...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCCTCAGATGCCCCTAAAGTGGCTCTGAGTTTTCCAGCTGCACACACAGCCTTCACATCAGCTCCATATTaGATAAGTAACTCGACGACA | + |
Preference number: 5 (lower is better) Translates to: PSDAPKVALSFPAAHTAFTSAPY*ISNSTT Trigger: TGTCGTCGAGTTACTTATCAAATATGGAGCTGATGT...GAAGGCTGTGTGTGCAGCTGGAAAACTCAGAGCCACTTTAGGGGCATCTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTAGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTA | + |
Preference number: 5 (lower is better) Translates to: EDREDHNFLLLTSLITCVGVLST*VRASLL Trigger: TAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCC...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCACAGACTAGAGATGACCAACTAATTATGTTCCAGTGCCTGGCAAAGCCTTCCTTTCCTCAACCCTGTTaGTCATCTCTGCCATCCTTG | + |
Preference number: 5 (lower is better) Translates to: PQTRDDQLIMFQCLAKPSFPQPC*SSLPSL Trigger: CAAGGATGGCAGAGATGACAAACAGGGTTGAGGAAA...GGAAGGCTTTGCCAGGCACTGGAACATAATTAGTTGGTCATCTCTAGTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTACTTCCCGAGTGCTGGAACTCAAGGCATGTGTCACCACATCTGGCCCTCTTTATTGTTTTTCTCCATaGCTATGTCAAAGGCAGACT | + |
Preference number: 5 (lower is better) Translates to: STSRVLELKACVTTSGPLYCFSP*LCQRQT Trigger: AGTCTGCCTTTGACATAGCAATGGAGAAAAACAATA...AAGAGGGCCAGATGTGGTGACACATGCCTTGAGTTCCAGCACTCGGGAAGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTATCCACTCCCCACCACTaGCTGGGTCGAGGAGTCAAG | + |
Preference number: 5 (lower is better) Translates to: EDREDHNFLLLTSLITCVSTPHH*LGRGVK Trigger: CTTGACTCCTCGACCCAGCAAGTGGTGGGGAGTGGA...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 90 bp | ACAGTTAGAACTTGCTGTCCATCTTGCATAGTTACAATAAATGGCTaGCCAATGCCTCCAGCAGGGAGTGATGTTTGGATGTTACCCAGA | + |
Preference number: 5 (lower is better) Translates to: TVRTCCPSCIVTING*PMPPAGSDVWMLPR Trigger: TCTGGGTAACATCCAAACATCACTCCCTGCTGGAGGCATTGGCCAGCCATTTATTGTAACTATGCAAGATGGACAGCAAGTTCTAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGCTAAATGAGCTGAGGTaGCTTTGGTGTTGGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: GLQARGTMLRCLIFVVFELNELR*LWCWLK Trigger: CTTCAGCCAACACCAAAGCAACCTCAGCTCATTTAG...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GAAGACAGAGAGGATCACAATTTCCTGCTATTAACAAGCCTAATTACTTGTGTACGTCTTGGCCTTTCCTaGCAGCTTCTAGCAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: EDREDHNFLLLTSLITCVRLGLS*QLLAAS Trigger: AGAGGCTGCTAGAAGCTGCAAGGAAAGGCCAAGACG...TACACAAGTAATTAGGCTTGTTAATAGCAGGAAATTGTGATCCTCTCTGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | ACTTGTGTAGAGTTTAGGAATTATCTTCCTTCCCCTAACCCTAGAGAGGTTAAACTAAATGAGCTGAGGTaGCTTTGGTGTTGGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: TCVEFRNYLPSPNPREVKLNELR*LWCWLK Trigger: CTTCAGCCAACACCAAAGCAACCTCAGCTCATTTAG...TTTAACCTCTCTAGGGTTAGGGGAAGGAAGATAATTCCTAAACTCTACACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | ATGTGCTCTAAGGATGTAAACAAAAGCCACCTACAAAGAAACCTGCTCCCTCTAACATCAGCTCCATATTaGATAAGTAACTCGACGACA | + |
Preference number: 5 (lower is better) Translates to: MCSKDVNKSHLQRNLLPLTSAPY*ISNSTT Trigger: TGTCGTCGAGTTACTTATCAAATATGGAGCTGATGT...TAGAGGGAGCAGGTTTCTTTGTAGGTGGCTTTTGTTTACATCCTTAGAGCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GGATTACAGGCACGAGGCACAATGCTCAGGTGTCTAATTTTTGTGGTTTTTGAGAACTTGCTGTCCATCTaGCATAGTTACAATAAATGG | + |
Preference number: 5 (lower is better) Translates to: GLQARGTMLRCLIFVVFENLLSI*HSYNKW Trigger: CCATTTATTGTAACTATGCAAGATGGACAGCAAGTT...CTCAAAAACCACAAAAATTAGACACCTGAGCATTGTGCCTCGTGCCTGTAATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | CCTGTAACTCACAATGGAGTTCAAGCTGGCTTTAAACTCGTAATCTTTCTGTTTACATCAGCTCCATATTaGATAAGTAACTCGACGACA | + |
Preference number: 5 (lower is better) Translates to: PVTHNGVQAGFKLVIFLFTSAPY*ISNSTT Trigger: TGTCGTCGAGTTACTTATCAAATATGGAGCTGATGT...AAACAGAAAGATTACGAGTTTAAAGCCAGCTTGAACTCCATTGTGAGTTACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTTTTTGCCTATCCATTGAGCCATTTCTCCAGCCGCATCTTTTGTTTCTAAGATATTGTTTTTCTCCATaGCTATGTCAAAGGCAGACT | + |
Preference number: 5 (lower is better) Translates to: SFCLSIEPFLQPHLLFLRYCFSP*LCQRQT Trigger: AGTCTGCCTTTGACATAGCAATGGAGAAAAACAATA...TCTTAGAAACAAAAGATGCGGCTGGAGAAATGGCTCAATGGATAGGCAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | TCTGTAATTCCAGCATATGTGAGGCAGGAAGATTACGAGTCATCTTTAATTACAACATCAGCTCCATATTaGATAAGTAACTCGACGACA | + |
Preference number: 5 (lower is better) Translates to: SVIPAYVRQEDYESSLITTSAPY*ISNSTT Trigger: TGTCGTCGAGTTACTTATCAAATATGGAGCTGATGT...TGTAATTAAAGATGACTCGTAATCTTCCTGCCTCACATATGCTGGAATTACAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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CDS-3UTR CAA 90 bp | TTTTCTAACTCAGAGACCTCATGCTCAAAAGTGACTTGGAACAATGAAACTTGGAACTTGCTGTCCATCTaGCATAGTTACAATAAATGG | + |
Preference number: 5 (lower is better) Translates to: FSNSETSCSKVTWNNETWNLLSI*HSYNKW Trigger: CCATTTATTGTAACTATGCAAGATGGACAGCAAGTT...CCAAGTTTCATTGTTCCAAGTCACTTTTGAGCATGAGGTCTCTGAGTTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS-3UTR CAA 90 bp | GTCATCTTTAATTACATTCAAAATCTGAGATTGCCCTGGGCTACTTTAGATACTTATTGTTTTTCTCCATaGCTATGTCAAAGGCAGACT | + |
Preference number: 5 (lower is better) Translates to: VIFNYIQNLRLPWATLDTYCFSP*LCQRQT Trigger: AGTCTGCCTTTGACATAGCAATGGAGAAAAACAATA...AGTATCTAAAGTAGCCCAGGGCAATCTCAGATTTTGAATGTAATTAAAGATGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107204.8 |
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CDS CCA 72 bp | AGAGGGACTCCATCAGTCACGATGGTGATGACCCTCTaGCCTCCACTCCCCACCACTTGCTGGGTCGAGGAG | + |
Preference number: 6 (lower is better) Translates to: RGTPSVTMVMTL*PPLPTTCWVEE Trigger: CTCCTCGACCCAGCAAGTGGTGGGGAGTGGAGGCCAGAGGGTCATCACCATCGTGACTGATGGAGTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CCA 72 bp | CGATACTGCTCGGCCTCCTGCTCTTTCTTGAGGAGCTaGTGTCTGTACTCCTGGGCTCTTCGGTTGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: RYCSASCSFLRS*CLYSWALRLAS Trigger: GGAGGCCAACCGAAGAGCCCAGGAGTACAGACACCAGCTCCTCAAGAAAGAGCAGGAGGCCGAGCAGTATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098873.11 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CAA 72 bp | TCAGCTGCAGCCATATGCAAAGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTAACGCCAGCTCGAAGG | + |
Preference number: 6 (lower is better) Translates to: SAAAICKGVLST*VRASLLTPARR Trigger: CCTTCGAGCTGGCGTTAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS CAA 90 bp | ACATGTCCATCAGCTGCAGCCATATGCAAAGGGGTCCTGTCCACTTaGGTCCGGGCATCCCTGCTAACGCCAGCTCGAAGGAGCACTTCT | + |
Preference number: 6 (lower is better) Translates to: TCPSAAAICKGVLST*VRASLLTPARRSTS Trigger: AGAAGTGCTCCTTCGAGCTGGCGTTAGCAGGGATGCCCGGACCAAAGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGATGGACATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS GCA 72 bp | TGTTCCGAGCCAGTCTGTGGTGAATGGAGCCCCATTTaGCATCAGTGTCCTCACTTCATCGTCTTGGCCTTT | + |
Preference number: 6 (lower is better) Translates to: CSEPVCGEWSPI*HQCPHFIVLAF Trigger: AAAGGCCAAGACGATGAAGTGAGGACACTGATGGCAAATGGGGCTCCATTCACCACAGACTGGCTCGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS TCA 72 bp | ACATCTGCACCACTCCTAACAAGCAGTTCCACGATGTaGACATGTCCATCAGCTGCAGCCATATGCAAAGGG | + |
Preference number: 6 (lower is better) Translates to: TSAPLLTSSSTM*TCPSAAAICKG Trigger: CCCTTTGCATATGGCTGCAGCTGATGGACATGTTCACATCGTGGAACTGCTTGTTAGGAGTGGTGCAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |
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CDS GCA 72 bp | AACAAGCAGTTCCACGATGTGAACATGTCCATCAGCTaGAGCCATATGCAAAGGGGTCCTGTCCACTTTGGT | + |
Preference number: 6 (lower is better) Translates to: NKQFHDVNMSIS*SHMQRGPVHFG Trigger: ACCAAAGTGGACAGGACCCCTTTGCATATGGCTGCAGCTGATGGACATGTTCACATCGTGGAACTGCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098873.11 ENSMUST00000107204.8 ENSMUST00000107209.8 ENSMUST00000136139.8 |