Pregenerated sensors for GABPB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027361Ensembl transcript IDs: ENSMUST00000039978.13, ENSMUST00000089745.11, ENSMUST00000103226.10, ENSMUST00000103227.8, ENSMUST00000110424.9, ENSMUST00000110425.9, ENSMUST00000124972.8
Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCTAGACTGGCTGGAAAGTCAGCTACAGGAATCTACCTATATCTaGCCTCCCAATGCTGGGTTACAGGTCTATGCAGCCCTACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLDWLESQLQESTYI*PPNAGLQVYAALPG Trigger: GCCAGGTAGGGCTGCATAGACCTGTAACCCAGCATTGGGAGGGCAGATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR GCA 90 bp | GCGGACAGTGGCCCCTCTCCCAACACTGCCCACCAAGGCATTAAATaGACTCCAGCGTCCTGTTCAATATTAATCAGTACACAAACCCAA | + |
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Preference number: 1 (lower is better) Translates to: ADSGPSPNTAHQGIK*TPASCSILISTQTQ Trigger: TTGGGTTTGTGTACTGATTAATATTGAACAGGACGCTGGAGTGCATTTAATGCCTTGGTGGGCAGTGTTGGGAGAGGGGCCACTGTCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR GCA 90 bp | TATGTGCGACAGGATTTGAGCCAGAGTCTCAAAGCGTCAAGGACCTaGTCCACCACCGAGCTCTATGGTCCACATTTTATGAATGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: YVRQDLSQSLKASRT*STTELYGPHFMNVQ Trigger: CTGCACATTCATAAAATGTGGACCATAGAGCTCGGTGGTGGAGCAGGTCCTTGACGCTTTGAGACTCTGGCTCAAATCCTGTCGCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | TCCAGGCAGCCACTCTGGGGCTTTTCAAGGCATGAGGAGTCTAATTaGTTTCATATGGCAGAACGTGTCTCAGATTGTATGTGCGACAGG | + |
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Preference number: 1 (lower is better) Translates to: SRQPLWGFSRHEESN*FHMAERVSDCMCDR Trigger: CCTGTCGCACATACAATCTGAGACACGTTCTGCCATATGAAACCAATTAGACTCCTCATGCCTTGAAAAGCCCCAGAGTGGCTGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | AAAGTTACCCCAGGCACGAACCAGCACATTTCCAGGCAGCCACTCTaGGGCTTTTCAAGGCATGAGGAGTCTAATTGGTTTCATATGGCA | + |
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Preference number: 1 (lower is better) Translates to: KVTPGTNQHISRQPL*GFSRHEESNWFHMA Trigger: TGCCATATGAAACCAATTAGACTCCTCATGCCTTGAAAAGCCCCAGAGTGGCTGCCTGGAAATGTGCTGGTTCGTGCCTGGGGTAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | GGCTGTTATTTCTTTACCTGGTATGTACCTCAGGAGCATACCTCCTaGCCTGACCTTCCGCTCCGTTCATATTGGATTGCTCTTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: GCYFFTWYVPQEHTS*PDLPLRSYWIALAL Trigger: AAGGGCAAGAGCAATCCAATATGAACGGAGCGGAAGGTCAGGTCAGGAGGTATGCTCCTGAGGTACATACCAGGTAAAGAAATAACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR TCA 90 bp | AATCAGTACACAAACCCAAGCCACGTGTTCTCCAACGGCTTCCTGTaGCTGAAGGGCAAGCAGCTTCATGATGCTGAAAATGTAGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: NQYTNPSHVFSNGFL*LKGKQLHDAENVAC Trigger: GCAAGCTACATTTTCAGCATCATGAAGCTGCTTGCCCTTCAGTCACAGGAAGCCGTTGGAGAACACGTGGCTTGGGTTTGTGTACTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | AGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATaGCTGGGAGTGAAAGCAACACACGTGCGCCTGCAGCTGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: RSKLHPVSHGLQQNP*LGVKATHVRLQLLS Trigger: AGAAAGCAGCTGCAGGCGCACGTGTGTTGCTTTCACTCCCAGTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | TCTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTaGAAACTGTTAGAAGGAACTGATAAACGAGGGGTGAGGACATCT | + |
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Preference number: 1 (lower is better) Translates to: SSPQYRTARKLSQPT*KLLEGTDKRGVRTS Trigger: AGATGTCCTCACCCCTCGTTTATCAGTTCCTTCTAACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | AGCACCATTTCATTCCACTCTAGCCCTGTTATCTTTCAGCCTCTGTaGGCACTGCGACCTGCAGTTTCCTTATTAAGGATGGGATCAGCA | + |
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Preference number: 1 (lower is better) Translates to: STISFHSSPVIFQPL*ALRPAVSLLRMGSA Trigger: TGCTGATCCCATCCTTAATAAGGAAACTGCAGGTCGCAGTGCTCACAGAGGCTGAAAGATAACAGGGCTAGAGTGGAATGAAATGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR TCA 90 bp | CGTCAAGGACCTGCTCCACCACCGAGCTCTATGGTCCACATTTTATaGATGTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: RQGPAPPPSSMVHIL*MCSQNMSLHGAMWK Trigger: TTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATTCATAAAATGTGGACCATAGAGCTCGGTGGTGGAGCAGGTCCTTGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | AAAACAAGGCCTCTCACTGACCTGAAGTTTACCCTTTTGCTAGACTaGCTGGAAAGTCAGCTACAGGAATCTACCTATATCTGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: KTRPLTDLKFTLLLD*LESQLQESTYICPP Trigger: GGGAGGGCAGATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGGGTAAACTTCAGGTCAGTGAGAGGCCTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR CCA 90 bp | TTGCAGATTCGAGTTCTCTTGCAAGCTGCTCCAAGAACATTGTCATaGTCGCCAGTAAAACCAGCTGTGAGCTTACTCACTCTCAACGAC | + |
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Preference number: 1 (lower is better) Translates to: LQIRVLLQAAPRTLS*SPVKPAVSLLTLND Trigger: GTCGTTGAGAGTGAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTGCAAGAGAACTCGAATCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | GCATCTGTCCACAACTGGTTTTCAAAGCAGATCCGACAAAAGGCCTaGCTTCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: ASVHNWFSKQIRQKA*LQSYNGVTGSQGYK Trigger: TTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGCTTTGAAAACCAGTTGTGGACAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR TCA 90 bp | CATTATCTTAAAATCCAGCGCCTCAAAGTGCTCGTGTGGAAGTCATaGTGGAAGGAAGGCACAGAGCAGTCTCACATCCTCACAATACAA | + |
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Preference number: 1 (lower is better) Translates to: HYLKIQRLKVLVWKS*WKEGTEQSHILTIQ Trigger: TTGTATTGTGAGGATGTGAGACTGCTCTGTGCCTTCCTTCCATCATGACTTCCACACGAGCACTTTGAGGCGCTGGATTTTAAGATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | AGAACTACGAAGGCTGAGGTGGCAAGGTCACTAGAATTCATGACTTaGAGACTAGACTGTAACAGCGAGGCTGCATCTCAAAATGAATAC | + |
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Preference number: 1 (lower is better) Translates to: RTTKAEVARSLEFMT*RLDCNSEAASQNEY Trigger: GTATTCATTTTGAGATGCAGCCTCGCTGTTACAGTCTAGTCTCCAAGTCATGAATTCTAGTGACCTTGCCACCTCAGCCTTCGTAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | AAAAGAGAATGGAATAGTCTGTCAAATGTCCATACATTTCAGAATTaGCAATATTGTGAGAGAGTCGCAGCACAGGCCCGGAGCGCGTTC | + |
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Preference number: 1 (lower is better) Translates to: KREWNSLSNVHTFQN*QYCERVAAQARSAF Trigger: GAACGCGCTCCGGGCCTGTGCTGCGACTCTCTCACAATATTGTCAATTCTGAAATGTATGGACATTTGACAGACTATTCCATTCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR GCA 90 bp | TTAAGTCTGCACCGAAATCAAAAAGAATTCCCCGTAACAGTGGCTTaGTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACTCATTT | + |
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Preference number: 1 (lower is better) Translates to: LSLHRNQKEFPVTVA*CGLWISATSFINSF Trigger: AAATGAGTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGGGAATTCTTTTTGATTTCGGTGCAGACTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | GGCTTGCTGTTATTACTGAAGATCAAAATTACATCCTGTATCACATaGTCTCCAGCAGAACCCATGACTGGGAGTGAAAGCAACACACGT | + |
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Preference number: 1 (lower is better) Translates to: GLLLLLKIKITSCIT*SPAEPMTGSESNTR Trigger: ACGTGTGTTGCTTTCACTCCCAGTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGTAATAACAGCAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | AGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTaGCTTAAAACAAGGCCTCTCACTGACCTGAAGTTTACCCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: RKMLRQVVRCMCLPY*LKTRPLTDLKFTLL Trigger: CAAAAGGGTAAACTTCAGGTCAGTGAGAGGCCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR TCA 90 bp | TCGATGTGTTCCCAAAGTATCACATCAAAGATTCCTAGCATGAAATaGGAGATGCATCTGTCCACAACTGGTTTTCAAAGCAGATCCGAC | + |
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Preference number: 1 (lower is better) Translates to: SMCSQSITSKIPSMK*EMHLSTTGFQSRSD Trigger: GTCGGATCTGCTTTGAAAACCAGTTGTGGACAGATGCATCTCTCATTTCATGCTAGGAATCTTTGATGTGATACTTTGGGAACACATCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR GCA 90 bp | GCACTGCGACCTGCAGTTTCCTTATTAAGGATGGGATCAGCACTTTaGCTCTTTCTGGTGGCTGACACAAAAATAAAAATCAGAAATAGT | + |
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Preference number: 1 (lower is better) Translates to: ALRPAVSLLRMGSAL*LFLVADTKIKIRNS Trigger: ACTATTTCTGATTTTTATTTTTGTGTCAGCCACCAGAAAGAGGCAAAGTGCTGATCCCATCCTTAATAAGGAAACTGCAGGTCGCAGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR CCA 90 bp | AAACAAGTGTCACTAGTAGGTGGCAAATGCACTGGTAAACTGTTTTaGCGATCAGGATATCGATGTGTTCCCAAAGTATCACATCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: KQVSLVGGKCTGKLF*RSGYRCVPKVSHQR Trigger: TCTTTGATGTGATACTTTGGGAACACATCGATATCCTGATCGCCAAAACAGTTTACCAGTGCATTTGCCACCTACTAGTGACACTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR CCA 90 bp | CCCGAATACTTGTTACACGACACCCAATTGTTTCCTCGAATCACTTaGCTTGCTGTTATTACTGAAGATCAAAATTACATCCTGTATCAC | + |
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Preference number: 1 (lower is better) Translates to: PEYLLHDTQLFPRIT*LAVITEDQNYILYH Trigger: GTGATACAGGATGTAATTTTGATCTTCAGTAATAACAGCAAGCCAAGTGATTCGAGGAAACAATTGGGTGTCGTGTAACAAGTATTCGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | ACATTTGGTCTAAGAGACAACAACCACGCTTACAACTTCTGTTTCTaGGAAATTAAGTCTGCACCGAAATCAAAAAGAATTCCCCGTAAC | + |
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Preference number: 1 (lower is better) Translates to: TFGLRDNNHAYNFCF*EIKSAPKSKRIPRN Trigger: GTTACGGGGAATTCTTTTTGATTTCGGTGCAGACTTAATTTCTCAGAAACAGAAGTTGTAAGCGTGGTTGTTGTCTCTTAGACCAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR CCA 90 bp | GTCCCGTTATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATaGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VPLSSCSIFYYSVFP*LCPYCVQFKTIFFL Trigger: CAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATAACGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR TCA 90 bp | AGTAACAGGAAGTGTAGCCAACCAATTCTGAAAGAACTGCAGAGGTaGACACAAATTATAAGTAGGACTCTTGAAGAAAACAAAACACTG | + |
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Preference number: 1 (lower is better) Translates to: SNRKCSQPILKELQR*TQIISRTLEENKTL Trigger: CAGTGTTTTGTTTTCTTCAAGAGTCCTACTTATAATTTGTGTTCACCTCTGCAGTTCTTTCAGAATTGGTTGGCTACACTTCCTGTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTCCGTGGAGCGGACAGTaGCCCCTCTCCCAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: TRAPAAAFSVTTLRLCGAPWSGQ*PLSQHC Trigger: GCAGTGTTGGGAGAGGGGCCACTGTCCGCTCCACGG...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | CTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGACACTCAGGGGATGCTaGGCAGTGGGTGCTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: LTCLHPKEDAKAGCKVYVTLRGC*AVGAPP Trigger: GGGTGGAGCACCCACTGCTCAGCATCCCCTGAGTGT...CACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR GCA 90 bp | ATGATCTGGCAAGGTGGGACACACGACCACACTCAGGGGATGCTGAGCAGTGGGATGGGATCAGCACTTTaGCTCTTTCTGGTGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: MIWQGGTHDHTQGMLSSGMGSAL*LFLVAD Trigger: GTCAGCCACCAGAAAGAGGCAAAGTGCTGATCCCAT...CCCACTGCTCAGCATCCCCTGAGTGTGGTCGTGTGTCCCACCTTGCCAGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR TCA 90 bp | CTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGCCACCCTACCTCACGTaGGGTGAGCACCATTTCATT | + |
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Preference number: 2 (lower is better) Translates to: LTCLHPKEDAKAGCKVYVPPYLT*GEHHFI Trigger: AATGAAATGGTGCTCACCTCACGTGAGGTAGGGTGG...CACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR TCA 90 bp | CTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTGGAAACTGTGGAGCTAACCTGATGTaGGAACAAACTGCACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVLSTEQHGSFPSLRGNCGANLM*EQTALA Trigger: AGCCAGTGCAGTTTGTTCTCACATCAGGTTAGCTCC...ACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTGGAAACTGTGCTATGTCAACACAGTaGGAGATTTCTCTCGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: LVLSTEQHGSFPSLRGNCAMSTQ*EISLGR Trigger: TCGACCGAGAGAAATCTCTCACTGTGTTGACATAGC...ACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTCTAGAATTCATGACTTaGAGACTAGACTGTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: TRAPAAAFSVTTLRLCGALEFMT*RLDCNS Trigger: GCTGTTACAGTCTAGTCTCCAAGTCATGAATTCTAG...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTCCAGATCCGACATCCTaGATATCAGAAATTTACATT | + |
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Preference number: 2 (lower is better) Translates to: TRAPAAAFSVTTLRLCGAPDPTS*ISEIYI Trigger: AATGTAAATTTCTGATATTCAGGATGTCGGATCTGG...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGACAGTAAACATCACCCATGACTGGGAGTaGAAGCAACACACGTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: VKILETTLSNVALETVNITHDWE*KQHTCA Trigger: GGCGCACGTGTGTTGCTTTCACTCCCAGTCATGGGT...GATGTTTACTGTCTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR CCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACTATTCGGTATTCCCATaGCTGTGTCCTTACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: PVTVACCGLWISATSFINYSVFP*LCPYCV Trigger: TACACAGTAAGGACACAGCCATGGGAATACCGAATA...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGAGTCAGGTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGTATAGAGGCTCCTTGTaGTCCCCAGAAAGGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: AVSQVKILETTLSNVALEYRGSL*SPERQV Trigger: CACTTGCCTTTCTGGGGACCACAAGGAGCCTCTATA...CTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCACCTGACTCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGGAGGGCTCGACAGAGTaGAAGAGTCAATGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWEGSTE*KSQCRN Trigger: GTTTCTGCATTGACTCTTTCACTCTGTCGAGCCCTC...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR GCA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGATGCTGAGCAGTGGGTaGTCCACCCTACCTCACGTG | + |
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Preference number: 2 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRMLSSG*STLPHV Trigger: CACGTGAGGTAGGGTGGAGCACCCACTGCTCAGCAT...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAGCTTGCTGTGGCCTCTaGATCTCAGCAACAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIACCGL*ISATSF Trigger: GAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGC...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAAACAGTGGCTTGCTGTaGCCTCTGGATCTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KVPGRNLFAEYFQHQSTINSGLL*PLDLSN Trigger: GTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTT...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| 3UTR-3UTR TCA 90 bp | GCGTGTGCACACTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTACACTGCAATAAACTCTaGACAGATTTCTTAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: ACAHSHVCTPRKMLRQVVHCNKL*TDFLNR Trigger: CCTGTTTAAGAAATCTGTTCAGAGTTTATTGCAGTG...TACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAGTGTGCACACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| 3UTR-3UTR GCA 90 bp | CTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTGGAAACTGTGAGTACAAAAGGTCCTaGTCTGCATACAAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LVLSTEQHGSFPSLRGNCEYKRS*SAYKSN Trigger: ATTGCTTTTGTATGCAGAGCAGGACCTTTTGTACTC...ACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCGCTTGCTGTGGCCTCTaGATCTCAGCAACAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SENLRQLKSCTKVPGRNLACCGL*ISATSF Trigger: GAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGC...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAAGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATGACGCTTGCTGTGGCCTCTaGATCTCAGCAACAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TEDQNYILYHMVSSRTHDACCGL*ISATSF Trigger: GAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGC...GTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCAACACTGCCCACCAAGGCATTAAATGCACTCCAGCGTCCTGTTCAATATTACAACTTCTGTTTCTaGGAAATTAAGTCTGCACCG | + |
|
Preference number: 2 (lower is better) Translates to: LPTLPTKALNALQRPVQYYNFCF*EIKSAP Trigger: CGGTGCAGACTTAATTTCTCAGAAACAGAAGTTGTA...ATATTGAACAGGACGCTGGAGTGCATTTAATGCCTTGGTGGGCAGTGTTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCAGATTGTATGTGCGACAGGATTTGAGCCAGAGTCTCAAAGCGTCAAGGAGATTCGAGTTCTCTTaGAAGCTGCTCCAAGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: CLRLYVRQDLSQSLKASRRFEFS*KLLQEH Trigger: ATGTTCTTGGAGCAGCTTGCAAGAGAACTCGAATCT...CCTTGACGCTTTGAGACTCTGGCTCAAATCCTGTCGCACATACAATCTGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGATCCGACAAAAGGCCTGGCTTCAATCCTACAATGGTGTTACTGGCTCAACCTGGCTTTTTATATaGGTGCTGAGGCTTCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: KQIRQKAWLQSYNGVTGSTWLFI*VLRLQT Trigger: AGTTTGAAGCCTCAGCACCCATATAAAAAGCCAGGT...TGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR CAA 90 bp | TATATTTTGCAGATTCGAGTTCTCTTGCAAGCTGCTCCAAGAACATaGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YILQIRVLLQAAPRT*SWSPVKPAVSLLTL Trigger: GAGAGTGAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTGCAAGAGAACTCGAATCTGCAAAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTATACAACTTCTGTTTCTaGGAAATTAAGTCTGCACCG | + |
|
Preference number: 2 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLYNFCF*EIKSAP Trigger: CGGTGCAGACTTAATTTCTCAGAAACAGAAGTTGTA...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCTGTTTTCAGAGAACCTaGGACAACTTAAAAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLCFQRT*DNLKAV Trigger: TACAGCTTTTAAGTTGTCTCAGGTTCTCTGAAAACA...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCTTCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCTCAGGTCCTCGTGTTTaGAGAACAAATGCTCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LASILQWCYWLTGLQNKPSGPRV*RTNALT Trigger: GGTAAGAGCATTTGTTCTGCAAACACGAGGACCTGA...GGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGAAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR CCA 90 bp | TTACTGAAGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATGGTGGGTCACAACCACTaGAGGGTCATATACTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKIKITSCITWSPAEPMVGHNH*RVIYSS Trigger: GGAAGAGTATATGACCCTCCAGTGGTTGTGACCCAC...CATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAACAAATGCTCTTACCCAAGGAGGTAGCCCACGAAAACCCCATACCTCAAAAATATTGGATTGCTCTTaGCCTTGTAAACCCATGATC | + |
|
Preference number: 2 (lower is better) Translates to: RTNALTQGGSPRKPHTSKILDCS*PCKPMI Trigger: GATCATGGGTTTACAAGGGCAAGAGCAATCCAATAT...TTTTGAGGTATGGGGTTTTCGTGGGCTACCTCCTTGGGTAAGAGCATTTGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR CCA 90 bp | TCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAGGAAAACCCTTTTGCTAGACTaGCTGGAAAGTCAGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SILQWCYWLTGLQNKPRKTLLLD*LESQLQ Trigger: CTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGGGT...TTTCCTGGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR CCA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGTGTTATTTCTTTACCTaGTATGTACCTCAGGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWCYFFT*YVPQEH Trigger: ATGCTCCTGAGGTACATACCAGGTAAAGAAATAACA...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR CCA 90 bp | AATGTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTAACAGTGGCTTGCTGTaGCCTCTGGATCTCAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: NVQSKHESAWSYVESYLINSGLL*PLDLSN Trigger: GTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTT...AATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTTCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAAAGAACTGCAGAGGTaGACACAAATTATAAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LASILQWCYWLTGLQNKPKELQR*TQIISR Trigger: CCTACTTATAATTTGTGTTCACCTCTGCAGTTCTTT...GGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGAAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGACAGTAAACATCCAAAAGGTCCTGCTCTaGATACAAAAGCAATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VKILETTLSNVALETVNIQKVLL*IQKQFP Trigger: TGGAAATTGCTTTTGTATGCAGAGCAGGACCTTTTG...GATGTTTACTGTCTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CCA 90 bp | TTACTGAAGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATGTATTCGGTATTCCCATaGCTGTGTCCTTACTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLKIKITSCITWSPAEPMYSVFP*LCPYCV Trigger: TACACAGTAAGGACACAGCCATGGGAATACCGAATA...CATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGACAGTAAACATCCATGAGGAGTCTAATTaGTTTCATATGGCAGAACGT | + |
|
Preference number: 2 (lower is better) Translates to: VKILETTLSNVALETVNIHEESN*FHMAER Trigger: ACGTTCTGCCATATGAAACCAATTAGACTCCTCATG...GATGTTTACTGTCTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAGGAAACCTCTTTCTGGTGGCTaGCACAAAAATAAAAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SILQWCYWLTGLQNKPRKPLSGG*HKNKNQ Trigger: CTGATTTTTATTTTTGTGTCAGCCACCAGAAAGAGG...TTTCCTGGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR CAA 90 bp | AATACTTGTTACACGACACCCAATTGTTTCCTCGAATCACTTGGCTaGCTGTTATTACTGAAGATCAAAATTACATCCTGTATCACATGG | + |
|
Preference number: 2 (lower is better) Translates to: NTCYTTPNCFLESLG*LLLLKIKITSCITW Trigger: CCATGTGATACAGGATGTAATTTTGATCTTCAGTAATAACAGCAAGCCAAGTGATTCGAGGAAACAATTGGGTGTCGTGTAACAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CCA 90 bp | AATGTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTAGTCTCGCAGGTAACTaGTTCTTTATACAGATAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NVQSKHESAWSYVESYLISLAGN*FFIQIS Trigger: GCTTATCTGTATAAAGAACCAGTTACCTGCGAGACT...AATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR GCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACTATTTATTGAGGGCTTaGCATATGTTTAAGGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNYLLRA*HMFKAK Trigger: TTTGGCCTTAAACATATGGCAAGCCCTCAATAAATA...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| 3UTR CCA 72 bp | AGGGAGGCTGAGGAGCACTGCTATAGAGGCTCCTTGTaGTCCCCAGAAAGGCAAGTGAGAGAGGCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: REAEEHCYRGSL*SPERQVREAGT Trigger: TGTCCCAGCCTCTCTCACTTGCCTTTCTGGGGACCACAAGGAGCCTCTATAGCAGTGCTCCTCAGCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | GCTATAGAGGCTCCTTGTGGTCCCCAGAAAGGCAAGTaGGAGAGGCTGGGACACGGACCCTTTCTTACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AIEAPCGPQKGK*ERLGHGPFLTL Trigger: GAGGGTAAGAAAGGGTCCGTGTCCCAGCCTCTCTCACTTGCCTTTCTGGGGACCACAAGGAGCCTCTATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | CTGAGCAGTGGGTGCTCCACCCTACCTCACGTGAGGTaGGCACCATTTCATTCCACTCTAGCCCTGTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSGCSTLPHVR*APFHSTLALLS Trigger: AGATAACAGGGCTAGAGTGGAATGAAATGGTGCTCACCTCACGTGAGGTAGGGTGGAGCACCCACTGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR TCA 72 bp | GTTACCACCTTGAGGCTTTGCGGAGCTAACCTGATGTaGGAACAAACTGCACTGGCTACTCCGTGGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTTLRLCGANLM*EQTALATPWSG Trigger: TCCGCTCCACGGAGTAGCCAGTGCAGTTTGTTCTCACATCAGGTTAGCTCCGCAAAGCCTCAAGGTGGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | TATCACATGGTCTCCAGCAGAACCCATGACTGGGAGTaGAAGCAACACACGTGCGCCTGCAGCTGCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YHMVSSRTHDWE*KQHTCACSCFL Trigger: GAGAAAGCAGCTGCAGGCGCACGTGTGTTGCTTTCACTCCCAGTCATGGGTTCTGCTGGAGACCATGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGAGTCAGGTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGTTTGCTTTGGCCATGTaGGAGACTGAGCCCGGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: AVSQVKILETTLSNVALEFALAM*ETEPGS Trigger: CGACCCGGGCTCAGTCTCCAACATGGCCAAAGCAAA...CTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCACCTGACTCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR GCA 72 bp | ATGGGTGCTGAGGCTTCAAACTCAGGTCCTCGTGTTTaGAGAACAAATGCTCTTACCCAAGGAGGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MGAEASNSGPRV*RTNALTQGGSP Trigger: TGGGCTACCTCCTTGGGTAAGAGCATTTGTTCTGCAAACACGAGGACCTGAGTTTGAAGCCTCAGCACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | TCAGCTACAGGAATCTACCTATATCTGCCCTCCCAATaGTGGGTTACAGGTCTATGCAGCCCTACCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SATGIYLYLPSQ*WVTGLCSPTWL Trigger: AAGCCAGGTAGGGCTGCATAGACCTGTAACCCAGCATTGGGAGGGCAGATATAGGTAGATTCCTGTAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | TGGCTGGAAAGTCAGCTACAGGAATCTACCTATATCTaGCCTCCCAATGCTGGGTTACAGGTCTATGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLESQLQESTYI*PPNAGLQVYAA Trigger: GGCTGCATAGACCTGTAACCCAGCATTGGGAGGGCAGATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | CAGGATTTGAGCCAGAGTCTCAAAGCGTCAAGGACCTaGTCCACCACCGAGCTCTATGGTCCACATTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: QDLSQSLKASRT*STTELYGPHFM Trigger: CATAAAATGTGGACCATAGAGCTCGGTGGTGGAGCAGGTCCTTGACGCTTTGAGACTCTGGCTCAAATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | ATATTGGATTGCTCTTGCCCTTGTAAACCCATGATCTaGCAAGGTGGGACACACGACCACACTCAGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: ILDCSCPCKPMI*QGGTHDHTQGM Trigger: CATCCCCTGAGTGTGGTCGTGTGTCCCACCTTGCCAGATCATGGGTTTACAAGGGCAAGAGCAATCCAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGTGCACACTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTACTGAAGTTTACCCTTTaGCTAGACTGGCTGGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ACAHSHVCTPRKMLRQVVLKFTL*LDWLES Trigger: ACTTTCCAGCCAGTCTAGCAAAAGGGTAAACTTCAG...TACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAGTGTGCACACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | GGCCCCTCTCCCAACACTGCCCACCAAGGCATTAAATaGACTCCAGCGTCCTGTTCAATATTAATCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GPSPNTAHQGIK*TPASCSILIST Trigger: TGTACTGATTAATATTGAACAGGACGCTGGAGTGCATTTAATGCCTTGGTGGGCAGTGTTGGGAGAGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | CAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTaGAAACTGTTAGAAGGAACTGATAAACGAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QYRTARKLSQPT*KLLEGTDKRGV Trigger: CACCCCTCGTTTATCAGTTCCTTCTAACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | CCTGCTCCACCACCGAGCTCTATGGTCCACATTTTATaGATGTGCAGTCAAAACATGAGTCTGCATGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PAPPPSSMVHIL*MCSQNMSLHGA Trigger: AGCTCCATGCAGACTCATGTTTTGACTGCACATTCATAAAATGTGGACCATAGAGCTCGGTGGTGGAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR GCA 72 bp | CCCTGTTATCTTTCAGCCTCTGTGAGCACTGCGACCTaGAGTTTCCTTATTAAGGATGGGATCAGCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PCYLSASVSTAT*SFLIKDGISTL Trigger: CAAAGTGCTGATCCCATCCTTAATAAGGAAACTGCAGGTCGCAGTGCTCACAGAGGCTGAAAGATAACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | CACCGAAATCAAAAAGAATTCCCCGTAACAGTGGCTTaGTGTGGCCTCTGGATCTCAGCAACAAGCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: HRNQKEFPVTVA*CGLWISATSFI Trigger: GATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGGGAATTCTTTTTGATTTCGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | CGAGTTCTCTTGCAAGCTGCTCCAAGAACATTGTCATaGTCGCCAGTAAAACCAGCTGTGAGCTTACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RVLLQAAPRTLS*SPVKPAVSLLT Trigger: AGTGAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTGCAAGAGAACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | AAGGCTGAGGTGGCAAGGTCACTAGAATTCATGACTTaGAGACTAGACTGTAACAGCGAGGCTGCATCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KAEVARSLEFMT*RLDCNSEAASQ Trigger: TTGAGATGCAGCCTCGCTGTTACAGTCTAGTCTCCAAGTCATGAATTCTAGTGACCTTGCCACCTCAGCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAGATCCGACAAAAGGCCTGGCTTCAATCCTACAATGGTGTTACTGGCTCACTCAGGTCCTCGTGTTaGCAGAACAAATGCTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: KQIRQKAWLQSYNGVTGSLRSSC*QNKCSY Trigger: GTAAGAGCATTTGTTCTGCAAACACGAGGACCTGAG...TGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR TCA 72 bp | TCATTCCACTCTAGCCCTGTTATCTTTCAGCCTCTGTaGGCACTGCGACCTGCAGTTTCCTTATTAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SFHSSPVIFQPL*ALRPAVSLLRM Trigger: CATCCTTAATAAGGAAACTGCAGGTCGCAGTGCTCACAGAGGCTGAAAGATAACAGGGCTAGAGTGGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR CCA 72 bp | GCAGATCCGACAAAAGGCCTGGCTTCAATCCTACAATaGTGTTACTGGCTCACAGGGTTACAAAATAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: ADPTKGLASILQ*CYWLTGLQNKP Trigger: GGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR CCA 72 bp | CCTCTCACTGACCTGAAGTTTACCCTTTTGCTAGACTaGCTGGAAAGTCAGCTACAGGAATCTACCTATATC | + |
|
Preference number: 3 (lower is better) Translates to: PLTDLKFTLLLD*LESQLQESTYI Trigger: GATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGGGTAAACTTCAGGTCAGTGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR CCA 72 bp | CCACTCTGGGGCTTTTCAAGGCATGAGGAGTCTAATTaGTTTCATATGGCAGAACGTGTCTCAGATTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: PLWGFSRHEESN*FHMAERVSDCM Trigger: CATACAATCTGAGACACGTTCTGCCATATGAAACCAATTAGACTCCTCATGCCTTGAAAAGCCCCAGAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | TGGAATAGTCTGTCAAATGTCCATACATTTCAGAATTaGCAATATTGTGAGAGAGTCGCAGCACAGGCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: WNSLSNVHTFQN*QYCERVAAQAR Trigger: CCGGGCCTGTGCTGCGACTCTCTCACAATATTGTCAATTCTGAAATGTATGGACATTTGACAGACTATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | TCACTAGTAGGTGGCAAATGCACTGGTAAACTGTTTTaGCGATCAGGATATCGATGTGTTCCCAAAGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SLVGGKCTGKLF*RSGYRCVPKVS Trigger: TGATACTTTGGGAACACATCGATATCCTGATCGCCAAAACAGTTTACCAGTGCATTTGCCACCTACTAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | CCTGCAGTTTCCTTATTAAGGATGGGATCAGCACTTTaGCTCTTTCTGGTGGCTGACACAAAAATAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: PAVSLLRMGSAL*LFLVADTKIKI Trigger: GATTTTTATTTTTGTGTCAGCCACCAGAAAGAGGCAAAGTGCTGATCCCATCCTTAATAAGGAAACTGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR GCA 72 bp | GGACATCTCATCTCCTTTAGATTCTTGTCTACGGATTaGTTTCTCAGCAGTGAGTCAGGTGAAGATTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GHLISFRFLSTD*FLSSESGEDFR Trigger: TCTAAAATCTTCACCTGACTCACTGCTGAGAAAGCAATCCGTAGACAAGAATCTAAAGGAGATGAGATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | TTATTACTGAAGATCAAAATTACATCCTGTATCACATaGTCTCCAGCAGAACCCATGACTGGGAGTGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLKIKITSCIT*SPAEPMTGSES Trigger: GCTTTCACTCCCAGTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | TCCCAAAGTATCACATCAAAGATTCCTAGCATGAAATaGGAGATGCATCTGTCCACAACTGGTTTTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQSITSKIPSMK*EMHLSTTGFQS Trigger: GCTTTGAAAACCAGTTGTGGACAGATGCATCTCTCATTTCATGCTAGGAATCTTTGATGTGATACTTTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR TCA 72 bp | ATATACTCTTCCCCAGGGGTCCCAGATCCGACATCCTaGATATCAGAAATTTACATTACAGTTTATATCCGT | + |
|
Preference number: 3 (lower is better) Translates to: IYSSPGVPDPTS*ISEIYITVYIR Trigger: ACGGATATAAACTGTAATGTAAATTTCTGATATTCAGGATGTCGGATCTGGGACCCCTGGGGAAGAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | AAGTGTAGCCAACCAATTCTGAAAGAACTGCAGAGGTaGACACAAATTATAAGTAGGACTCTTGAAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KCSQPILKELQR*TQIISRTLEEN Trigger: GTTTTCTTCAAGAGTCCTACTTATAATTTGTGTTCACCTCTGCAGTTCTTTCAGAATTGGTTGGCTACACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| 3UTR TCA 72 bp | ATTGTTTCCTCGAATCACTTGGCTTGCTGTTATTACTaGAGATCAAAATTACATCCTGTATCACATGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IVSSNHLACCYY*RSKLHPVSHGL Trigger: GAGACCATGTGATACAGGATGTAATTTTGATCTTCAGTAATAACAGCAAGCCAAGTGATTCGAGGAAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | TCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATaGCTGTGTCCTTACTGTGTACAGTTCAAGACTATA | + |
|
Preference number: 3 (lower is better) Translates to: SSCSIFYYSVFP*LCPYCVQFKTI Trigger: TATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CCA 72 bp | TTGTTACACGACACCCAATTGTTTCCTCGAATCACTTaGCTTGCTGTTATTACTGAAGATCAAAATTACATC | + |
|
Preference number: 3 (lower is better) Translates to: LLHDTQLFPRIT*LAVITEDQNYI Trigger: GATGTAATTTTGATCTTCAGTAATAACAGCAAGCCAAGTGATTCGAGGAAACAATTGGGTGTCGTGTAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | CTAAGAGACAACAACCACGCTTACAACTTCTGTTTCTaGGAAATTAAGTCTGCACCGAAATCAAAAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LRDNNHAYNFCF*EIKSAPKSKRI Trigger: AATTCTTTTTGATTTCGGTGCAGACTTAATTTCTCAGAAACAGAAGTTGTAAGCGTGGTTGTTGTCTCTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR TCA 72 bp | CTATGGTCCACATTTTATGAATGTGCAGTCAAAACATaGGTCTGCATGGAGCTATGTGGAAAGTTATTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LWSTFYECAVKT*VCMELCGKLFN Trigger: ATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATTCATAAAATGTGGACCATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CATGATCTGGCAAGGTGGGACACACGACCACACTCAGGGGATGCTGAGCAGTGGTGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HDLARWDTRPHSGDAEQWCGQMK*RSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCA...CCACTGCTCAGCATCCCCTGAGTGTGGTCGTGTGTCCCACCTTGCCAGATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CCA 90 bp | CATGATCTGGCAAGGTGGGACACACGACCACACTCAGGGGATGCTGAGCAGTGGGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: HDLARWDTRPHSGDAEQWGPLWS*HLYLHR Trigger: CCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACC...CCACTGCTCAGCATCCCCTGAGTGTGGTCGTGTGTCCCACCTTGCCAGATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CCA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRAPAAAFSVTTLRLCGATHPTG*YGVQIP Trigger: GGGAATTTGCACTCCATACCAACCAGTGGGATGGGT...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | GCGTGTGCACACTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTATACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ACAHSHVCTPRKMLRQVVYCAAR*SGEVPN Trigger: GTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTA...TACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAGTGTGCACACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACCTTTGTTGGTCTGGATaGGTGTCATGGCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINLCWSG*VSWPPA Trigger: AGCTGGAGGCCATGACACGCATCCAGACCAACAAAG...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLSRHVQ*CPVHFG Trigger: ACCAAAGTGGACCGGACACCACTGCACATGGCGGCT...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTACACTGTCTCTTAGCTaGTGGCTCTTCACTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRAPAAAFSVTTLRLCGATLSLS*WLFTDD Trigger: GTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTGT...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCCGAACTTCATCATCTTaGCCGGCTCGTGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLRTSSS*PARAAS Trigger: AGAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCG...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCCTGTTTCATCTGTaGGGTTCACCACCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLLLFHL*GSPPLR Trigger: CCGGAGGGGTGGTGAACCTCACAGATGAAACAGGAG...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINEMPIL*GQMKWR Trigger: TCTCCACTTCATCTGGCCGCACAGTATGGGCATTTC...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCCTGCCTGTAGGCCTCTaGCTCCTGCTCCTTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLLPVGL*LLLLLK Trigger: CTTAAGAAGGAGCAGGAGGCAGAGGCCTACAGGCAG...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CTCACTAACTCCTGTAAAGTTACCCCAGGCACGAACCAGCACATTTCCAGGCAGCTTTGTTGGTCTGGATaGGTGTCATGGCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSCKVTPGTNQHISRQLCWSG*VSWPPA Trigger: AGCTGGAGGCCATGACACGCATCCAGACCAACAAAG...CTGCCTGGAAATGTGCTGGTTCGTGCCTGGGGTAACTTTACAGGAGTTAGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINVSGPL*SWHLYL Trigger: TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACAC...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGCTAGACTGGCTGGAAAGTCAGCTACAGGAATCTACCTATATCTGCCCAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFARLAGKSATGIYLYLPSRHVQ*CPVHFG Trigger: ACCAAAGTGGACCGGACACCACTGCACATGGCGGCT...GGGCAGATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCTACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLYCAAR*SGEVPN Trigger: GTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTA...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CTCACTAACTCCTGTAAAGTTACCCCAGGCACGAACCAGCACATTTCCAGGCAGATCGTGATGACTTGCTaGCCCCCTGAGCTAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSCKVTPGTNQHISRQIVMTC*PPELTT Trigger: AGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGAT...CTGCCTGGAAATGTGCTGGTTCGTGCCTGGGGTAACTTTACAGGAGTTAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCAACACTGCCCACCAAGGCATTAAATGCACTCCAGCGTCCTGTTCAATATTCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLPTKALNALQRPVQYSTMLA*PSEAAM Trigger: CATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA...ATATTGAACAGGACGCTGGAGTGCATTTAATGCCTTGGTGGGCAGTGTTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CTCACTAACTCCTGTAAAGTTACCCCAGGCACGAACCAGCACATTTCCAGGCAGTCCCACTGGTTGGTATaGAGTGCAAATTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSCKVTPGTNQHISRQSHWLV*SANSPA Trigger: AGCTGGGGAATTTGCACTCCATACCAACCAGTGGGA...CTGCCTGGAAATGTGCTGGTTCGTGCCTGGGGTAACTTTACAGGAGTTAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACCTGTCTCTTAGCTGGTaGCTCTTCACTGATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINLSLSW*LFTDDS Trigger: ACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAG...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCGAACTTCATCATCTTaGCCGGCTCGTGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWRTSSS*PARAAS Trigger: AGAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCG...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCCCGGGTCGCGTAAGCATAGATCAAGTGAATTCAAAAGTTCAACACTACTCCTGTTTCATCTGTaGGGTTCACCACCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TEPGSRKHRSSEFKSSTLLLFHL*GSPPLR Trigger: CCGGAGGGGTGGTGAACCTCACAGATGAAACAGGAG...TAGTGTTGAACTTTTGAATTCACTTGATCTATGCTTACGCGACCCGGGCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACGAGCTAACTACTTGCTaGATTGCACCATCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINELTTC*IAPSTD Trigger: ATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTC...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLVSGPL*SWHLYL Trigger: TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACAC...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVSRHVQ*CPVHFG Trigger: ACCAAAGTGGACCGGACACCACTGCACATGGCGGCT...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTATCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLSTMLA*PSEAAM Trigger: CATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLTHPTG*YGVQIP Trigger: GGGAATTTGCACTCCATACCAACCAGTGGGATGGGT...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAGGCCACTGGAGTTTCTaGAGAATTGGACAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPGHWSF*RIGQWG Trigger: GCCCCATTGTCCAATTCTTCAGAAACTCCAGTGGCC...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTCAGATTGTATGTGCGACAGGATTTGAGCCAGAGTCTCAAAGCGTCAAGGGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLRLYVRQDLSQSLKASRDLLTP*ANYLLN Trigger: ATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTC...CCTTGACGCTTTGAGACTCTGGCTCAAATCCTGTCGCACATACAATCTGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGTTTCCTTATTAAGGATGGGATCAGCACTTTGCCTCTTTCTGGTGGCTGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAVSLLRMGSALCLFLVAEMPIL*GQMKWR Trigger: TCTCCACTTCATCTGGCCGCACAGTATGGGCATTTC...AGCCACCAGAAAGAGGCAAAGTGCTGATCCCATCCTTAATAAGGAAACTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCACCATCCACAGATTCTaGGGTAACCACTTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLTIHRF*GNHFLC Trigger: ACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGT...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACAACTACTTGCTGAATTaGACCATCCACAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINNYLLN*TIHRFC Trigger: GCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTT...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCCTGGTTGGTATGGAGTaGAAATTCCCCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLLVGME*KFPSWI Trigger: AATCCAGCTGGGGAATTTGCACTCCATACCAACCAG...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATACTGCCTGTAGGCCTCTaGCTCCTGCTCCTTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTILPVGL*LLLLLK Trigger: CTTAAGAAGGAGCAGGAGGCAGAGGCCTACAGGCAG...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCACTTTGTTGGTCTGGATaGGTGTCATGGCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPLCWSG*VSWPPA Trigger: AGCTGGAGGCCATGACACGCATCCAGACCAACAAAG...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGCTAGACTGGCTGGAAAGTCAGCTACAGGAATCTACCTATATCTGCCCGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PFARLAGKSATGIYLYLPVSGPL*SWHLYL Trigger: TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACAC...GGGCAGATATAGGTAGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTATCCCACTGGTTGGTATaGAGTGCAAATTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLSHWLV*SANSPA Trigger: AGCTGGGGAATTTGCACTCCATACCAACCAGTGGGA...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAGCTGACCCATCCCACTaGTTGGTATGGAGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLADPSH*LVWSAN Trigger: ATTTGCACTCCATACCAACCAGTGGGATGGGTCAGC...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCCTGTCTCTTAGCTGGTaGCTCTTCACTGATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLLSLSW*LFTDDS Trigger: ACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAG...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CAA 72 bp | GTAGCTTGCAGTTTTTCAAACTTAGCGTTATGCATTTaGCTTTGGCCATGTTGGAGACTGAGCCCGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VACSFSNLALCI*LWPCWRLSPGR Trigger: GCGACCCGGGCTCAGTCTCCAACATGGCCAAAGCAAAATGCATAACGCTAAGTTTGAAAAACTGCAAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGCTCCTGTTTCATCTGTaGGGTTCACCACCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRLLFHL*GSPPLR Trigger: CCGGAGGGGTGGTGAACCTCACAGATGAAACAGGAG...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGCTCCTGTTTCATCTGTaGGGTTCACCACCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWLLFHL*GSPPLR Trigger: CCGGAGGGGTGGTGAACCTCACAGATGAAACAGGAG...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPDLLTP*ANYLLN Trigger: ATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTC...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACTTGACGTCAGCACCATaGTTAAGCAAAACTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVACCGLWISATSFINLTSAP*LSKTST Trigger: AGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATCCTTCTTAAGCAGCTaGTGTCGGTATTTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPSFLSS*CRYFWA Trigger: GGCCCAGAAATACCGACAGCAGCTGCTTAAGAAGGA...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATATGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTICGQMK*RSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCA...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTTGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVCGQMK*RSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCA...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVGPLWS*HLYLHR Trigger: CCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACC...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATCCCACTGGTTGGTATaGAGTGCAAATTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPSHWLV*SANSPA Trigger: AGCTGGGGAATTTGCACTCCATACCAACCAGTGGGA...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGACTCCTGTTTCATCTGTaGGGTTCACCACCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRDSALLHQQMSVEEEGLLFHL*GSPPLR Trigger: CCGGAGGGGTGGTGAACCTCACAGATGAAACAGGAG...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLEEFPN*TADTPV Trigger: AACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTC...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGGTCACAATGATGGGCTaGCCCATCCCACTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWVTMMG*PIPLVG Trigger: ACCAACCAGTGGGATGGGTCAGCCCATCATTGTGAC...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTAACCTGGAGTTTCTaGAGAATTGGACAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWLTWSF*RIGQWG Trigger: GCCCCATTGTCCAATTCTTCAGAAACTCCAGGTTAG...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVEMPIL*GQMKWR Trigger: TCTCCACTTCATCTGGCCGCACAGTATGGGCATTTC...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTGGAAACTGTATGATTATGTTCTGTTaGCCAATGCAGAGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSTEQHGSFPSLRGNCMIMFC*PMQSCH Trigger: ATGACAGCTCTGCATTGGGCAACAGAACATAATCAT...ACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAACCATCCACAGATTCTaGGGTAACCACTTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPTIHRF*GNHFLC Trigger: ACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGT...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCACTGGTTGGTATGGAGTaGAAATTCCCCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPLVGME*KFPSWI Trigger: AATCCAGCTGGGGAATTTGCACTCCATACCAACCAG...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLGPLWS*HLYLHR Trigger: CCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACC...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGACGAACTTCATCATCTTaGCCGGCTCGTGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRDSALLHQQMSVEEEGRTSSS*PARAAS Trigger: AGAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCG...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAGAGCTAACTACTTGCTaGATTGCACCATCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPELTTC*IAPSTD Trigger: ATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTC...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCATCGTGATGACTTGCTaGCCCCCTGAGCTAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLIVMTC*PPELTT Trigger: AGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGAT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATACACTACTGGAGTTTCTaGAGAATTGGACAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIHYWSF*RIGQWG Trigger: GCCCCATTGTCCAATTCTTCAGAAACTCCAGTAGTG...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATATCATCCAGCTGTTTCTaGAGCGCTTCTCTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTISSSCF*SASLSS Trigger: TGAAGAGAGAGAAGCGCTTCAGAAACAGCTGGATGA...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTTCATCCAGCTGTTTCTaGAGCGCTTCTCTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVSSSCF*SASLSS Trigger: TGAAGAGAGAGAAGCGCTTCAGAAACAGCTGGATGA...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAAACTACTTGCTGAATTaGACCATCCACAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLNYLLN*TIHRFC Trigger: GCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTT...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGACAGTAAACATCTCCTTCTTAAGCAGCTaGTGTCGGTATTTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKILETTLSNVALETVNISFLSS*CRYFWA Trigger: GGCCCAGAAATACCGACAGCAGCTGCTTAAGAAGGA...GATGTTTACTGTCTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWGPLWS*HLYLHR Trigger: CCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACC...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTSRHVQ*CPVHFG Trigger: ACCAAAGTGGACCGGACACCACTGCACATGGCGGCT...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGTCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRSTMLA*PSEAAM Trigger: CATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGTCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWSTMLA*PSEAAM Trigger: CATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGTCAGGTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGGGGTTGGTGTTGATTTaGTTCTGCATAGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSQVKILETTLSNVALEGLVLI*FCIAIC Trigger: ACAGATTGCTATGCAGAACCAAATCAACACCAACCC...CTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCACCTGACTCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| 3UTR CAA 72 bp | AAAACAAGGCCTCTCACTGACCTGAAGTTTACCCTTTaGCTAGACTGGCTGGAAAGTCAGCTACAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KTRPLTDLKFTL*LDWLESQLQES Trigger: AGATTCCTGTAGCTGACTTTCCAGCCAGTCTAGCAAAAGGGTAAACTTCAGGTCAGTGAGAGGCCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGATCGTGATGACTTGCTaGCCCCCTGAGCTAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEIVMTC*PPELTT Trigger: AGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGAT...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | GTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTGTAGTCACAATGATGGGCTaGCCCATCCCACTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQSKHESAWSYVESYLIVVTMMG*PIPLVG Trigger: ACCAACCAGTGGGATGGGTCAGCCCATCATTGTGAC...TACAATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGTCTGTGGTAGAGAAATaGCCATACTGTGCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKESVVEK*PYCAAR Trigger: TCTGGCCGCACAGTATGGGCATTTCTCTACCACAGA...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | CTAGTCCTCAGTACAGAACAGCACGGAAGCTTTCCCAGCCTACGTGGAAACTGTGTGTTGATTTGGTTCTaGATAGCAATCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LVLSTEQHGSFPSLRGNCVLIWF*IAICNI Trigger: GATATTACAGATTGCTATGCAGAACCAAATCAACAC...ACAGTTTCCACGTAGGCTGGGAAAGCTTCCGTGCTGTTCTGTACTGAGGACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCACCATCCACAGATTCTaGGGTAACCACTTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLTIHRF*GNHFLC Trigger: ACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCCTGGTTGGTATGGAGTaGAAATTCCCCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLLVGME*KFPSWI Trigger: AATCCAGCTGGGGAATTTGCACTCCATACCAACCAG...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTATTCAGCAATGTCTGTTaGTGGTACTGTCAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLFSNVC*WYCQYL Trigger: CAAGTATTGACAGTACCAGCAACAGACATTGCTGAA...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEVSGPL*SWHLYL Trigger: TAAGTAGAGATGCCAGGACCAAAGTGGACCGGACAC...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSSRHVQ*CPVHFG Trigger: ACCAAAGTGGACCGGACACCACTGCACATGGCGGCT...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGATCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLRDSALLHQQMSVEEEGSTMLA*PSEAAM Trigger: CATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGTCCCACTGGTTGGTATaGAGTGCAAATTCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKESHWLV*SANSPA Trigger: AGCTGGGGAATTTGCACTCCATACCAACCAGTGGGA...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWTHPTG*YGVQIP Trigger: GGGAATTTGCACTCCATACCAACCAGTGGGATGGGT...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCACACTGTCTCTTAGCTaGTGGCTCTTCACTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLTLSLS*WLFTDD Trigger: GTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTGT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTCGAACTTCATCATCTTaGCCGGCTCGTGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IESSWLKSRYQAVVFSIIRTSSS*PARAAS Trigger: AGAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCG...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AATGTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTCGAACTTCATCATCTTaGCCGGCTCGTGCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVQSKHESAWSYVESYLIRTSSS*PARAAS Trigger: AGAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCG...AATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | GTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTGTATACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSKHESAWSYVESYLIVYCAAR*SGEVPN Trigger: GTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTA...TACAATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATACATCAGCACCATATTTaGTTAAAAGCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIHQHHI*LKAPPP Trigger: AGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATG...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACGTCACAATGATGGGCTaGCCCATCCCACTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNVTMMG*PIPLVG Trigger: ACCAACCAGTGGGATGGGTCAGCCCATCATTGTGAC...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAATGATTATGTTCTGTTaGCCAATGCAGAGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPMIMFC*PMQSCH Trigger: ATGACAGCTCTGCATTGGGCAACAGAACATAATCAT...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGCTGGTTGGTATGGAGTaGAAATTCCCCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKELVGME*KFPSWI Trigger: AATCCAGCTGGGGAATTTGCACTCCATACCAACCAG...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGCCTTACTTCAATTTCTaGACATTCCACCCGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEPYFNF*TFHPAL Trigger: GAGAGCCGGGTGGAATGTGCAGAAATTGAAGTAAGG...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAACTGCCTGTAGGCCTCTaGCTCCTGCTCCTTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKLPVGL*LLLLLK Trigger: CTTAAGAAGGAGCAGGAGGCAGAGGCCTACAGGCAG...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTGGGTTGGTGTTGATTTaGTTCTGCATAGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVGLVLI*FCIAIC Trigger: ACAGATTGCTATGCAGAACCAAATCAACACCAACCC...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAGGGTTGGTGTTGATTTaGTTCTGCATAGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIGLVLI*FCIAIC Trigger: ACAGATTGCTATGCAGAACCAAATCAACACCAACCC...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATATGCAAATTCCCCAGCTaGATTCCATCTGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTICKFPS*IPSVTI Trigger: GATAGTTACAGATGGAATCCAGCTGGGGAATTTGCA...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| 3UTR CAA 72 bp | GTCAGAAAAGCATATATTTTGCAGATTCGAGTTCTCTaGCAAGCTGCTCCAAGAACATTGTCATGGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRKAYILQIRVL*QAAPRTLSWSP Trigger: TGGCGACCATGACAATGTTCTTGGAGCAGCTTGCAAGAGAACTCGAATCTGCAAAATATATGCTTTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR TCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACTACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNYCAAR*SGEVPN Trigger: GTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTA...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAATACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKYCAAR*SGEVPN Trigger: GTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTA...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR TCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEEEFPN*TADTPV Trigger: AACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTC...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | CAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAGGAAAAGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSYNGVTGSQGYKINPGKEEFPN*TADTPV Trigger: AACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTC...TTTTCCTGGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWEEFPN*TADTPV Trigger: AACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTC...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR TCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGGCCACTGGAGTTTCTaGAGAATTGGACAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSGHWSF*RIGQWG Trigger: GCCCCATTGTCCAATTCTTCAGAAACTCCAGTGGCC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAGGCCACTGGAGTTTCTaGAGAATTGGACAATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKGHWSF*RIGQWG Trigger: GCCCCATTGTCCAATTCTTCAGAAACTCCAGTGGCC...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 |
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| CDS-3UTR GCA 90 bp | CTGGCTTCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCTTGACGTCAGCACCATaGTTAAGCAAAACTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: LASILQWCYWLTGLQNKPLTSAP*LSKTST Trigger: AGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA...GGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGAAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTATGATTATGTTCTGTTaGCCAATGCAGAGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVMIMFC*PMQSCH Trigger: ATGACAGCTCTGCATTGGGCAACAGAACATAATCAT...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATATTCAGCAATGTCTGTTaGTGGTACTGTCAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIFSNVC*WYCQYL Trigger: CAAGTATTGACAGTACCAGCAACAGACATTGCTGAA...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCATGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSCGQMK*RSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCA...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTTGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IESSWLKSRYQAVVFSIICGQMK*RSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCA...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNGPLWS*HLYLHR Trigger: CCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACC...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCTGCAAATTCCCCAGCTaGATTCCATCTGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: SENLRQLKSCTKVPGRNLCKFPS*IPSVTI Trigger: GATAGTTACAGATGGAATCCAGCTGGGGAATTTGCA...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTGCTGACCCATCCCACTaGTTGGTATGGAGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTADPSH*LVWSAN Trigger: ATTTGCACTCCATACCAACCAGTGGGATGGGTCAGC...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGCATCAGCACCATATTTaGTTAAAAGCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEHQHHI*LKAPPP Trigger: AGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATG...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGCATCAGCACCATATTTaGTTAAAAGCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRHQHHI*LKAPPP Trigger: AGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATG...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNDLLTP*ANYLLN Trigger: ATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTC...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKDLLTP*ANYLLN Trigger: ATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTC...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTATCGTGATGACTTGCTaGCCCCCTGAGCTAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: IESSWLKSRYQAVVFSIIIVMTC*PPELTT Trigger: AGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGAT...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSEMPIL*GQMKWR Trigger: TCTCCACTTCATCTGGCCGCACAGTATGGGCATTTC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATGACTTGACGTCAGCACCATaGTTAAGCAAAACTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TEDQNYILYHMVSSRTHDLTSAP*LSKTST Trigger: AGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA...GTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGGTGTTGATTTGGTTCTaGATAGCAATCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWVLIWF*IAICNI Trigger: GATATTACAGATTGCTATGCAGAACCAAATCAACAC...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAGTGTTGATTTGGTTCTaGATAGCAATCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: QKFLGEISLQSISSISPPVLIWF*IAICNI Trigger: GATATTACAGATTGCTATGCAGAACCAAATCAACAC...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAATCCTTCTTAAGCAGCTaGTGTCGGTATTTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKSFLSS*CRYFWA Trigger: GGCCCAGAAATACCGACAGCAGCTGCTTAAGAAGGA...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGGGGTTGGTGTTGATTTaGTTCTGCATAGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEGLVLI*FCIAIC Trigger: ACAGATTGCTATGCAGAACCAAATCAACACCAACCC...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | TCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAGGAAAGGGTTGGTGTTGATTTaGTTCTGCATAGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SILQWCYWLTGLQNKPRKGLVLI*FCIAIC Trigger: ACAGATTGCTATGCAGAACCAAATCAACACCAACCC...TTTCCTGGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNTHPTG*YGVQIP Trigger: GGGAATTTGCACTCCATACCAACCAGTGGGATGGGT...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGCTGACCCATCCCACTaGTTGGTATGGAGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSADPSH*LVWSAN Trigger: ATTTGCACTCCATACCAACCAGTGGGATGGGTCAGC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAGCTGACCCATCCCACTaGTTGGTATGGAGTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKADPSH*LVWSAN Trigger: ATTTGCACTCCATACCAACCAGTGGGATGGGTCAGC...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CCA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTACACTGTCTCTTAGCTaGTGGCTCTTCACTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTTLSLS*WLFTDD Trigger: GTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTGT...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTEEFPN*TADTPV Trigger: AACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTC...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CTTCATGATGCTGAAAATGTAGCTTGCAGTTTTTCAAACTTAGCGTTATGCATTTCATCCAGCTGTTTCTaGAGCGCTTCTCTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHDAENVACSFSNLALCISSSCF*SASLSS Trigger: TGAAGAGAGAGAAGCGCTTCAGAAACAGCTGGATGA...AATGCATAACGCTAAGTTTGAAAAACTGCAAGCTACATTTTCAGCATCATGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | TCAATCCTACAATGGTGTTACTGGCTCACAGGGTTACAAAATAAACCCAGGAAAATGATTATGTTCTGTTaGCCAATGCAGAGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SILQWCYWLTGLQNKPRKMIMFC*PMQSCH Trigger: ATGACAGCTCTGCATTGGGCAACAGAACATAATCAT...TTTCCTGGGTTTATTTTGTAACCCTGTGAGCCAGTAACACCATTGTAGGATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR GCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACACCATCCACAGATTCTaGGGTAACCACTTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNTIHRF*GNHFLC Trigger: ACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGT...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGAAACTACTTGCTGAATTaGACCATCCACAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRDSALLHQQMSVEEEGNYLLN*TIHRFC Trigger: GCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTT...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGTTCAGCAATGTCTGTTaGTGGTACTGTCAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEFSNVC*WYCQYL Trigger: CAAGTATTGACAGTACCAGCAACAGACATTGCTGAA...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCACTGTCTCTTAGCTGGTaGCTCTTCACTGATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSLSLSW*LFTDDS Trigger: ACTGTCATCAGTGAAGAGCCACCAGCTAAGAGACAG...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACACACTGTCTCTTAGCTaGTGGCTCTTCACTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNTLSLS*WLFTDD Trigger: GTCATCAGTGAAGAGCCACCAGCTAAGAGACAGTGT...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTCATCAGCACCATATTTaGTTAAAAGCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTHQHHI*LKAPPP Trigger: AGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATG...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACGAGCTAACTACTTGCTaGATTGCACCATCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNELTTC*IAPSTD Trigger: ATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTC...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR TCA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTGAGCTAACTACTTGCTaGATTGCACCATCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IESSWLKSRYQAVVFSIIELTTC*IAPSTD Trigger: ATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTC...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGATTGACGTCAGCACCATaGTTAAGCAAAACTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: KLRDSALLHQQMSVEEEGLTSAP*LSKTST Trigger: AGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| 3UTR CAA 72 bp | TACACGACACCCAATTGTTTCCTCGAATCACTTGGCTaGCTGTTATTACTGAAGATCAAAATTACATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTTPNCFLESLG*LLLLKIKITSC Trigger: ACAGGATGTAATTTTGATCTTCAGTAATAACAGCAAGCCAAGTGATTCGAGGAAACAATTGGGTGTCGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR TCA 90 bp | CTTCATGATGCTGAAAATGTAGCTTGCAGTTTTTCAAACTTAGCGTTATGCATTCATCAGCACCATATTTaGTTAAAAGCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LHDAENVACSFSNLALCIHQHHI*LKAPPP Trigger: AGGTGGTGGAGCTTTTAATCAAATATGGTGCTGATG...AATGCATAACGCTAAGTTTGAAAAACTGCAAGCTACATTTTCAGCATCATGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGGTGTTGATTTGGTTCTaGATAGCAATCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWVLIWF*IAICNI Trigger: GATATTACAGATTGCTATGCAGAACCAAATCAACAC...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAAACTACTTGCTGAATTaGACCATCCACAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKNYLLN*TIHRFC Trigger: GCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTT...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCATGCAAATTCCCCAGCTaGATTCCATCTGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSCKFPS*IPSVTI Trigger: GATAGTTACAGATGGAATCCAGCTGGGGAATTTGCA...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
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| CDS-3UTR CCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAATGCAAATTCCCCAGCTaGATTCCATCTGTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKCKFPS*IPSVTI Trigger: GATAGTTACAGATGGAATCCAGCTGGGGAATTTGCA...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAATTGACGTCAGCACCATaGTTAAGCAAAACTTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLCTVQDYILSGQKVKLTSAP*LSKTST Trigger: AGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAATGATTATGTTCTGTTaGCCAATGCAGAGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSMIMFC*PMQSCH Trigger: ATGACAGCTCTGCATTGGGCAACAGAACATAATCAT...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR GCA 90 bp | AATGTGCAGTCAAAACATGAGTCTGCATGGAGCTATGTGGAAAGTTATTTAATTTTCAGCAATGTCTGTTaGTGGTACTGTCAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQSKHESAWSYVESYLIFSNVC*WYCQYL Trigger: CAAGTATTGACAGTACCAGCAACAGACATTGCTGAA...AATTAAATAACTTTCCACATAGCTCCATGCAGACTCATGTTTTGACTGCACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR GCA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACGTGTTGATTTGGTTCTaGATAGCAATCTGTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNVLIWF*IAICNI Trigger: GATATTACAGATTGCTATGCAGAACCAAATCAACAC...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS CCA 90 bp | CATGGCCCTCAGAAGCCGCCATGTGCAGTGGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTACACCGGCTCGGAGAAGAACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HGPQKPPCAVVSGPL*SWHLYLHRLGEEPL Trigger: CAGAGGTTCTTCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ATGATCTGGCAAGGTGGGACACACGACCACACTCAGGGGATGCTGAGCAGTGGGGCGAACTTCATCATCTaGACCGGCTCGTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MIWQGGTHDHTQGMLSSGANFII*TGSCRF Trigger: GAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCGC...CCCACTGCTCAGCATCCCCTGAGTGTGGTCGTGTGTCCCACCTTGCCAGATCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| CDS CCA 90 bp | AACTTCTACTATGTTGGCATGGCCCTCAGAAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGTCCTGGCATCTCTACTTACACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NFYYVGMALRSRHVQ*CPVHFGPGISTYTG Trigger: GCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CCCGTAACAGTGGCTTGCTGTGGCCTCTGGATCTCAGCAACAAGCTTCATCAACGCGAACTTCATCATCTaGACCGGCTCGTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVTVACCGLWISATSFINANFII*TGSCRF Trigger: GAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCGC...GTTGATGAAGCTTGTTGCTGAGATCCAGAGGCCACAGCAAGCCACTGTTACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTTCAGGACTCTCCGGGTaGGTGTTGATTTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRAPAAAFSVTTLRLCGASGLSG*VLIWFC Trigger: GCAGAACCAAATCAACACCAACCCGGAGAGTCCTGA...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS CCA 90 bp | TTCATCTGTGAGGTTCACCACCCCTCCGGGTCCAATGATGAACTGTaGTGTGGCAGCGTGTATTGTCACAGTGTCAGGACTCTCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FICEVHHPSGSNDEL*CGSVYCHSVRTLRV Trigger: AACCCGGAGAGTCCTGACACTGTGACAATACACGCTGCCACACCACAGTTCATCATTGGACCCGGAGGGGTGGTGAACCTCACAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS TCA 90 bp | ACTGTCAATACTTGCTGTCCATCGGGCATCGTCACAATGATGGGCTaGCCCATCCCACTGGTTGGTATGGAGTGCAAATTCCCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVNTCCPSGIVTMMG*PIPLVGMECKFPSW Trigger: CCAGCTGGGGAATTTGCACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATGCCCGATGGACAGCAAGTATTGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ACACGTGCGCCTGCAGCTGCTTTCTCTGTTACCACCTTGAGGCTTTGCGGAGCTAAAACTTCTACTATGTaGGCATGGCCCTCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRAPAAAFSVTTLRLCGAKTSTM*AWPSEA Trigger: GGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTT...AGCTCCGCAAAGCCTCAAGGTGGTAACAGAGAAAGCAGCTGCAGGCGCACGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGCACACTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTAGTGTGGCAGCGTGTATaGTCACAGTGTCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ACAHSHVCTPRKMLRQVVVWQRV*SQCQDS Trigger: AGAGTCCTGACACTGTGACAATACACGCTGCCACAC...TACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAGTGTGCACACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS GCA 90 bp | AGCAAAACTTCTACTATGTTGGCATGGCCCTCAGAAGCCGCCATGTaGAGTGGTGTCCGGTCCACTTTGGTCCTGGCATCTCTACTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SKTSTMLAWPSEAAM*SGVRSTLVLASLLT Trigger: TGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS CCA 90 bp | TTGACGTCAGCACCATGCTTAAGCAAAACTTCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATGTGCAGTGGTGTCCGGTCCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTSAPCLSKTSTMLA*PSEAAMCSGVRSTL Trigger: CAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS TCA 90 bp | TTGCTGGTACTGTCAATACTTGCTGTCCATCGGGCATCGTCACAATaGTGGGCTGACCCATCCCACTGGTTGGTATGGAGTGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLSILAVHRASSQ*WADPSHWLVWSANS Trigger: GGAATTTGCACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATGCCCGATGGACAGCAAGTATTGACAGTACCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS GCA 90 bp | ACCGGCTCGGAGAAGAACCTCTGTGGTAGAGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGAAGTTCCCAACCAGTCTGTAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGSEKNLCGREMPIL*GQMKWRSSQPVCSK Trigger: TTTACTACAGACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTTCTCTACCACAGAGGTTCTTCTCCGAGCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 ENSMUST00000124972.8 |
||
| CDS CCA 90 bp | TCCATCGGGCATCGTCACAATGATGGGCTGACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCCCAGCTGGATTCCATCTGTAACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SIGHRHNDGLTHPTG*YGVQIPQLDSICNY Trigger: ATAGTTACAGATGGAATCCAGCTGGGGAATTTGCACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATGCCCGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCAGCGAACTTCATCATCTaGACCGGCTCGTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QKFLGEISLQSISSISPPANFII*TGSCRF Trigger: GAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCGC...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAGATCCGACAAAAGGCCTGGCTTCAATCCTACAATGGTGTTACTGGCTCAGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: KQIRQKAWLQSYNGVTGSGVRST*VLASLL Trigger: AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACC...TGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGCACACTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTACGGGTTGGTGTTGATTaGGTTCTGCATAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACAHSHVCTPRKMLRQVVRVGVD*VLHSNL Trigger: CAGATTGCTATGCAGAACCAAATCAACACCAACCCG...TACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAGTGTGCACACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | GCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTACTCGACCCATCCCACTGGTaGGTATGGAGTGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPRTLSWSPVKPAVSLLDPSHW*VWSANS Trigger: GGAATTTGCACTCCATACCAACCAGTGGGATGGGTC...GAGTAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAGTGTGGCAGCGTGTATaGTCACAGTGTCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLVWQRV*SQCQDS Trigger: AGAGTCCTGACACTGTGACAATACACGCTGCCACAC...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS TCA 90 bp | AGAAGAACCTCTGTGGTAGAGAAATGCCCATACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAACCAGTCTGTAGTAAAAGGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRTSVVEKCPYCAAR*SGEVPNQSVVKGAP Trigger: TGGAGCTCCTTTTACTACAGACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTTCTCTACCACAGAGGTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 ENSMUST00000124972.8 |
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| CDS TCA 90 bp | CAGCTGGATTCCATCTGTAACTATCGTGATGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAATTGCACCATCCACAGATTCTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLDSICNYRDDLLTP*ANYLLNCTIHRFCG Trigger: ACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGATAGTTACAGATGGAATCCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCCCGGGTCGCGTAAGCATAGATCAAGTGAATTCAAAAGTTCAACACTAGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: TEPGSRKHRSSEFKSSTLGVRST*VLASLL Trigger: AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACC...TAGTGTTGAACTTTTGAATTCACTTGATCTATGCTTACGCGACCCGGGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGTCAGGACTCTCCGGGTaGGTGTTGATTTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPRKMLRQVVRCMCLPYWSGLSG*VLIWFC Trigger: GCAGAACCAAATCAACACCAACCCGGAGAGTCCTGA...CCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | CTCCCAACACTGCCCACCAAGGCATTAAATGCACTCCAGCGTCCTGTTCAATATGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTLPTKALNALQRPVQYGVSEE*DNGAEA Trigger: AGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCC...ATATTGAACAGGACGCTGGAGTGCATTTAATGCCTTGGTGGGCAGTGTTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AAGCAGATCCGACAAAAGGCCTGGCTTCAATCCTACAATGGTGTTACTGGCTCAAAAACTTCTACTATGTaGGCATGGCCCTCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQIRQKAWLQSYNGVTGSKTSTM*AWPSEA Trigger: GGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTT...TGAGCCAGTAACACCATTGTAGGATTGAAGCCAGGCCTTTTGTCGGATCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAGACCCATCCCACTGGTaGGTATGGAGTGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIDPSHW*VWSANS Trigger: GGAATTTGCACTCCATACCAACCAGTGGGATGGGTC...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS TCA 90 bp | AAGGCAGCTAACGTAGCTAATACTGACGTAGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTTTCATCTGTGAGGTTCACCACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAANVANTDVEEFPN*TADTPVSSVRFTTP Trigger: AGGGGTGGTGAACCTCACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGTATTAGCTACGTTAGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CTCACATGTCTGCACCCCAAGGAAGATGCTAAGGCAGGTTGTAAGGTGTATGTGAACATATCCTTTGCATaGACGTCAGCACCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTCLHPKEDAKAGCKVYVNISFA*TSAPCL Trigger: TAAGCATGGTGCTGACGTCAATGCAAAGGATATGTT...CACATACACCTTACAACCTGCCTTAGCATCTTCCTTGGGGTGCAGACATGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAGATGATTATGTTCTGTaGCCCAATGCAGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLDDYVL*PNAELS Trigger: TGACAGCTCTGCATTGGGCAACAGAACATAATCATC...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGTCAGGTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGGATGATTATGTTCTGTaGCCCAATGCAGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVSQVKILETTLSNVALEDDYVL*PNAELS Trigger: TGACAGCTCTGCATTGGGCAACAGAACATAATCATC...CTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCACCTGACTCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCACGGGTTGGTGTTGATTaGGTTCTGCATAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKFLGEISLQSISSISPPRVGVD*VLHSNL Trigger: CAGATTGCTATGCAGAACCAAATCAACACCAACCCG...TGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | CCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAATTGTTCTCTCCGGGTTGGTGTaGATTTGGTTCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRNLFAEYFQHQSTIIVLSGLV*IWFCIA Trigger: TGCTATGCAGAACCAAATCAACACCAACCCGGAGAG...AACAATTATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | ACTGAAGATCAAAATTACATCCTGTATCACATGGTCTCCAGCAGAACCCATGACGACCCATCCCACTGGTaGGTATGGAGTGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEDQNYILYHMVSSRTHDDPSHW*VWSANS Trigger: GGAATTTGCACTCCATACCAACCAGTGGGATGGGTC...GTCATGGGTTCTGCTGGAGACCATGTGATACAGGATGTAATTTTGATCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| CDS GCA 90 bp | GCTGCAGCAAAACACACCGGGTATAAGGCTCCTTACTTCAATTTCTaGACATTCCACCCGGCTCTCAATTATTTCCATACACTGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AAAKHTGYKAPYFNF*TFHPALNYFHTLSL Trigger: AAGAGACAGTGTATGGAAATAATTGAGAGCCGGGTGGAATGTGCAGAAATTGAAGTAAGGAGCCTTATACCCGGTGTGTTTTGCTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 |
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| CDS-3UTR CAA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGAGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: KLRDSALLHQQMSVEEEGGVRST*VLASLL Trigger: AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACC...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTCCAAGAACATTGTCATGGTCGCCAGTAAAACCAGCTGTGAGCTTAAACATATCCTTTGCATaGACGTCAGCACCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QAAPRTLSWSPVKPAVSLNISFA*TSAPCL Trigger: TAAGCATGGTGCTGACGTCAATGCAAAGGATATGTT...TAAGCTCACAGCTGGTTTTACTGGCGACCATGACAATGTTCTTGGAGCAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | GCAGTGAGTCAGGTGAAGATTTTAGAGACAACACTGTCCAATGTGGCTCTGGAGAACATATCCTTTGCATaGACGTCAGCACCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AVSQVKILETTLSNVALENISFA*TSAPCL Trigger: TAAGCATGGTGCTGACGTCAATGCAAAGGATATGTT...CTCCAGAGCCACATTGGACAGTGTTGTCTCTAAAATCTTCACCTGACTCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | CCTGCAGTTTCCTTATTAAGGATGGGATCAGCACTTTGCCTCTTTCTGGTGGCTACATCAGCACCATATTaGATTAAAAGCTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: PAVSLLRMGSALCLFLVATSAPY*IKSSTT Trigger: GGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGT...AGCCACCAGAAAGAGGCAAAGTGCTGATCCCATCCTTAATAAGGAAACTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
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| CDS-3UTR CAA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATACGGGTTGGTGTTGATTaGGTTCTGCATAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIRVGVD*VLHSNL Trigger: CAGATTGCTATGCAGAACCAAATCAACACCAACCCG...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGGTGTGGCAGCGTGTATaGTCACAGTGTCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWVWQRV*SQCQDS Trigger: AGAGTCCTGACACTGTGACAATACACGCTGCCACAC...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVPGRNLFAEYFQHQSTIGVSEE*DNGAEA Trigger: AGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCC...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTCAGATTGTATGTGCGACAGGATTTGAGCCAGAGTCTCAAAGCGTCAAGGCTTCAGCAATGTCTGTaGCTGGTACTGTCAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: CLRLYVRQDLSQSLKASRLQQCL*LVLSIL Trigger: AAGTATTGACAGTACCAGCAACAGACATTGCTGAAG...CCTTGACGCTTTGAGACTCTGGCTCAAATCCTGTCGCACATACAATCTGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGCGAACTTCATCATCTaGACCGGCTCGTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSANFII*TGSCRF Trigger: GAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCGC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTGCGAACTTCATCATCTaGACCGGCTCGTGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IESSWLKSRYQAVVFSIIANFII*TGSCRF Trigger: GAAGCGGCACGAGCCGGTCAAGATGATGAAGTTCGC...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTGVRST*VLASLL Trigger: AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACC...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCAAAACTTCTACTATGTaGGCATGGCCCTCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SENLRQLKSCTKVPGRNLKTSTM*AWPSEA Trigger: GGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGCTCTCCGGGTTGGTGTaGATTTGGTTCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRLSGLV*IWFCIA Trigger: TGCTATGCAGAACCAAATCAACACCAACCCGGAGAG...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SENLRQLKSCTKVPGRNLGVSEE*DNGAEA Trigger: AGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCC...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VSLLCTVQDYILSGQKVKGVRST*VLASLL Trigger: AAGTAGAGATGCCAGGACCAAAGTGGACCGGACACC...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATAACATCAGCACCATATTaGATTAAAAGCTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KVPGRNLFAEYFQHQSTITSAPY*IKSSTT Trigger: GGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGT...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGCGGGTTGGTGTTGATTaGGTTCTGCATAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKEDGVSNTLNEFSSSKERVGVD*VLHSNL Trigger: CAGATTGCTATGCAGAACCAAATCAACACCAACCCG...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGCGGGTTGGTGTTGATTaGGTTCTGCATAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWRVGVD*VLHSNL Trigger: CAGATTGCTATGCAGAACCAAATCAACACCAACCCG...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AAACTAAGAGATAGTGCTTTGTTACACCAACAAATGAGTGTGGAAGAGGAAGGACTCTCCGGGTTGGTGTaGATTTGGTTCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLRDSALLHQQMSVEEEGLSGLV*IWFCIA Trigger: TGCTATGCAGAACCAAATCAACACCAACCCGGAGAG...TCCTTCCTCTTCCACACTCATTTGTTGGTGTAACAAAGCACTATCTCTTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTTCAGGACTCTCCGGGTaGGTGTTGATTTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTSGLSG*VLIWFC Trigger: GCAGAACCAAATCAACACCAACCCGGAGAGTCCTGA...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEGVSEE*DNGAEA Trigger: AGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCC...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRGVSEE*DNGAEA Trigger: AGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCC...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTGGGCGAAATCTCTTTGCAGAGTATTTCCAGCATCAGTCCACCATACTTCAGCAATGTCTGTaGCTGGTACTGTCAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: KVPGRNLFAEYFQHQSTILQQCL*LVLSIL Trigger: AAGTATTGACAGTACCAGCAACAGACATTGCTGAAG...TATGGTGGACTGATGCTGGAAATACTCTGCAAAGAGATTTCGCCCAGGAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCAACATATCCTTTGCATaGACGTCAGCACCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SENLRQLKSCTKVPGRNLNISFA*TSAPCL Trigger: TAAGCATGGTGCTGACGTCAATGCAAAGGATATGTT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGGATGATTATGTTCTGTaGCCCAATGCAGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKEDGVSNTLNEFSSSKEDDYVL*PNAELS Trigger: TGACAGCTCTGCATTGGGCAACAGAACATAATCATC...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATGCTAAGGCAGGTTGTAAGGTGTATGTGTCTACCTTATTGGCTTAAAACAAGGGATGATTATGTTCTGTaGCCCAATGCAGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLRQVVRCMCLPYWLKTRDDYVL*PNAELS Trigger: TGACAGCTCTGCATTGGGCAACAGAACATAATCATC...CCTTGTTTTAAGCCAATAAGGTAGACACATACACCTTACAACCTGCCTTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089745.11 |
||
| CDS-3UTR CAA 90 bp | TCAGAGAACCTGAGACAACTTAAAAGCTGTACAAAAGTTCCTGGGCGAAATCTCACATCAGCACCATATTaGATTAAAAGCTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SENLRQLKSCTKVPGRNLTSAPY*IKSSTT Trigger: GGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGT...GAGATTTCGCCCAGGAACTTTTGTACAGCTTTTAAGTTGTCTCAGGTTCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | TATCAAGCTGTAGTATTTTCTATTATTCGGTATTCCCATGGCTGTGTCCTTACTCTCTCCGGGTTGGTGTaGATTTGGTTCTGCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YQAVVFSIIRYSHGCVLTLSGLV*IWFCIA Trigger: TGCTATGCAGAACCAAATCAACACCAACCCGGAGAG...AGTAAGGACACAGCCATGGGAATACCGAATAATAGAAAATACTACAGCTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACTCAGGACTCTCCGGGTaGGTGTTGATTTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNSGLSG*VLIWFC Trigger: GCAGAACCAAATCAACACCAACCCGGAGAGTCCTGA...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTTCAGGACTCTCCGGGTaGGTGTTGATTTGGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IESSWLKSRYQAVVFSIISGLSG*VLIWFC Trigger: GCAGAACCAAATCAACACCAACCCGGAGAGTCCTGA...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGTGTGGCAGCGTGTATaGTCACAGTGTCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSVWQRV*SQCQDS Trigger: AGAGTCCTGACACTGTGACAATACACGCTGCCACAC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTGTGTGGCAGCGTGTATaGTCACAGTGTCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: IESSWLKSRYQAVVFSIIVWQRV*SQCQDS Trigger: AGAGTCCTGACACTGTGACAATACACGCTGCCACAC...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAGACCCATCCCACTGGTaGGTATGGAGTGCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSDPSHW*VWSANS Trigger: GGAATTTGCACTCCATACCAACCAGTGGGATGGGTC...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
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| CDS-3UTR CAA 90 bp | AGGAAGGAGGATGGTGTTAGCAATACTCTAAATGAATTCAGTTCCTCAAAGGAGCTTCAGCAATGTCTGTaGCTGGTACTGTCAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKEDGVSNTLNEFSSSKELQQCL*LVLSIL Trigger: AAGTATTGACAGTACCAGCAACAGACATTGCTGAAG...CTCCTTTGAGGAACTGAATTCATTTAGAGTATTGCTAACACCATCCTCCTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | TATTCCCATGGCTGTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGCTTCAGCAATGTCTGTaGCTGGTACTGTCAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: YSHGCVLTVYSSRLYSFWLQQCL*LVLSIL Trigger: AAGTATTGACAGTACCAGCAACAGACATTGCTGAAG...CCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACACAGCCATGGGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAAAAACTTCTACTATGTaGGCATGGCCCTCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSKTSTM*AWPSEA Trigger: GGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTT...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | GTGTCCTTACTGTGTACAGTTCAAGACTATATTCTTTCTGGACAAAAGGTAAAAGATGATTATGTTCTGTaGCCCAATGCAGAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLLCTVQDYILSGQKVKDDYVL*PNAELS Trigger: TGACAGCTCTGCATTGGGCAACAGAACATAATCATC...TTTTACCTTTTGTCCAGAAAGAATATAGTCTTGAACTGTACACAGTAAGGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS-3UTR CAA 90 bp | CCAAGTGTTACCAGGTTAACAAACTTTGTTACAAACAAATTCTGCACTCATTCAAACATATCCTTTGCATaGACGTCAGCACCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSVTRLTNFVTNKFCTHSNISFA*TSAPCL Trigger: TAAGCATGGTGCTGACGTCAATGCAAAGGATATGTT...TGAATGAGTGCAGAATTTGTTTGTAACAAAGTTTGTTAACCTGGTAACACTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | AAATCAGAGATGGAATTTAAAAACCAAAGACAGTCCAAGTGTTACCAGGTTAACACATCAGCACCATATTaGATTAAAAGCTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: KSEMEFKNQRQSKCYQVNTSAPY*IKSSTT Trigger: GGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGT...GTTAACCTGGTAACACTTGGACTGTCTTTGGTTTTTAAATTCCATCTCTGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039978.13 |
||
| CDS-3UTR CAA 90 bp | ATTGAGAGCTCATGGCTTAAGTCCCGTTATCAAGCTGTAGTATTTTCTATTATTACATCAGCACCATATTaGATTAAAAGCTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: IESSWLKSRYQAVVFSIITSAPY*IKSSTT Trigger: GGTGGTGGAGCTTTTAATCAAATATGGTGCTGATGT...AATAATAGAAAATACTACAGCTTGATAACGGGACTTAAGCCATGAGCTCTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CAA 90 bp | GCATGGCCCTCAGAAGCCGCCATGTGCAGTGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTTACACCGGCTCGGAGAAGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWPSEAAMCSGVRST*VLASLLTPARRRTS Trigger: AGAGGTTCTTCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | CCGCCATGTGCAGTGGTGTCCGGTCCACTTTGGTCCTaGCATCTCTACTTACACCGGCTCGGAGAAGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: PPCAVVSGPLWS*HLYLHRLGEEP Trigger: AGGTTCTTCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | CAGAAGCCGCCATGTGCAGTGGTGTCCGGTCCACTTTaGTCCTGGCATCTCTACTTACACCGGCTCGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QKPPCAVVSGPL*SWHLYLHRLGE Trigger: TTCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CAA 72 bp | TCAGAAGCCGCCATGTGCAGTGGTGTCCGGTCCACTTaGGTCCTGGCATCTCTACTTACACCGGCTCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SEAAMCSGVRST*VLASLLTPARR Trigger: TCTCCGAGCCGGTGTAAGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS GCA 72 bp | TCTACTATGTTGGCATGGCCCTCAGAAGCCGCCATGTaGAGTGGTGTCCGGTCCACTTTGGTCCTGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: STMLAWPSEAAM*SGVRSTLVLAS Trigger: AGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | TATGTTGGCATGGCCCTCAGAAGCCGCCATGTGCAGTaGTGTCCGGTCCACTTTGGTCCTGGCATCTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: YVGMALRSRHVQ*CPVHFGPGIST Trigger: AGTAGAGATGCCAGGACCAAAGTGGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | GAGGTTCACCACCCCTCCGGGTCCAATGATGAACTGTaGTGTGGCAGCGTGTATTGTCACAGTGTCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: EVHHPSGSNDEL*CGSVYCHSVRT Trigger: AGTCCTGACACTGTGACAATACACGCTGCCACACCACAGTTCATCATTGGACCCGGAGGGGTGGTGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | GCACCATGCTTAAGCAAAACTTCTACTATGTTGGCATaGCCCTCAGAAGCCGCCATGTGCAGTGGTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: APCLSKTSTMLA*PSEAAMCSGVR Trigger: CCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTTGCTTAAGCATGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS TCA 72 bp | ACTTGCTGTCCATCGGGCATCGTCACAATGATGGGCTaGCCCATCCCACTGGTTGGTATGGAGTGCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: TCCPSGIVTMMG*PIPLVGMECKF Trigger: GAATTTGCACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATGCCCGATGGACAGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS TCA 72 bp | CTGTCAATACTTGCTGTCCATCGGGCATCGTCACAATaGTGGGCTGACCCATCCCACTGGTTGGTATGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSILAVHRASSQ*WADPSHWLVWS Trigger: ACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATGCCCGATGGACAGCAAGTATTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS CCA 72 bp | CATCGTCACAATGATGGGCTGACCCATCCCACTGGTTaGTATGGAGTGCAAATTCCCCAGCTGGATTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HRHNDGLTHPTG*YGVQIPQLDSI Trigger: GATGGAATCCAGCTGGGGAATTTGCACTCCATACCAACCAGTGGGATGGGTCAGCCCATCATTGTGACGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS CAA 90 bp | TTTGCATTGACGTCAGCACCATGCTTAAGCAAAACTTCTACTATGTaGGCATGGCCCTCAGAAGCCGCCATGTGCAGTGGTGTCCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FALTSAPCLSKTSTM*AWPSEAAMCSGVRS Trigger: GGACCGGACACCACTGCACATGGCGGCTTCTGAGGGCCATGCCAACATAGTAGAAGTTTTGCTTAAGCATGGTGCTGACGTCAATGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
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| CDS GCA 72 bp | GAGAAGAACCTCTGTGGTAGAGAAATGCCCATACTGTaGGGCCAGATGAAGTGGAGAAGTTCCCAACCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EKNLCGREMPIL*GQMKWRSSQPV Trigger: GACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTTCTCTACCACAGAGGTTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 ENSMUST00000124972.8 |
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| CDS CAA 72 bp | ACCACTTCCTCTGTGGCCACTGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCTTCAGCTAAGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TTSSVATGVSEE*DNGAEASAKAA Trigger: AGCTGCCTTAGCTGAAGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCCAGTGGCCACAGAGGAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039978.13 ENSMUST00000103227.8 ENSMUST00000110424.9 |
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| CDS GCA 72 bp | GCTAACTACTTGCTGAATTGCACCATCCACAGATTCTaGGGTAACCACTTCCTCTGTGGCCACTGGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ANYLLNCTIHRF*GNHFLCGHWSF Trigger: GAAACTCCAGTGGCCACAGAGGAAGTGGTTACCGCAGAATCTGTGGATGGTGCAATTCAGCAAGTAGTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039978.13 ENSMUST00000103227.8 ENSMUST00000110424.9 |
||
| CDS CCA 72 bp | GGTAGAGAAATGCCCATACTGTGCGGCCAGATGAAGTaGAGAAGTTCCCAACCAGTCTGTAGTAAAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GREMPILCGQMK*RSSQPVCSKRS Trigger: GCTCCTTTTACTACAGACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTTCTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 ENSMUST00000124972.8 |
||
| CDS CCA 72 bp | CTTCCTCTGTGGCCACTACTGGAGTTTCTGAAGAATTaGACAATGGGGCAGAAGCTTCAGCTAAGGCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LPLWPLLEFLKN*TMGQKLQLRQL Trigger: TAGCTGCCTTAGCTGAAGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCCAGTAGTGGCCACAGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103226.10 ENSMUST00000110425.9 |
||
| CDS CAA 72 bp | ACTTCCTCTGTGGCCACTACTGGAGTTTCTGAAGAATaGGACAATGGGGCAGAAGCTTCAGCTAAGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSVATTGVSEE*DNGAEASAKAA Trigger: AGCTGCCTTAGCTGAAGCTTCTGCCCCATTGTCCAATTCTTCAGAAACTCCAGTAGTGGCCACAGAGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103226.10 ENSMUST00000110425.9 |
||
| CDS TCA 72 bp | TCTGTGGTAGAGAAATGCCCATACTGTGCGGCCAGATaGAGTGGAGAAGTTCCCAACCAGTCTGTAGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SVVEKCPYCAAR*SGEVPNQSVVK Trigger: TTTTACTACAGACTGGTTGGGAACTTCTCCACTTCATCTGGCCGCACAGTATGGGCATTTCTCTACCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 ENSMUST00000124972.8 |
||
| CDS TCA 72 bp | TCCATCTGTAACTATCGTGATGACTTGCTGACCCCCTaGGCTAACTACTTGCTGAATTGCACCATCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SICNYRDDLLTP*ANYLLNCTIHR Trigger: TCTGTGGATGGTGCAATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGATAGTTACAGATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS CAA 90 bp | GTGGCAGCGTGTATTGTCACAGTGTCAGGACTCTCCGGGTTGGTGTaGATTTGGTTCTGCATAGCAATCTGTAATATCTCTGCTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: VAACIVTVSGLSGLV*IWFCIAICNISAKS Trigger: AGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACCCGGAGAGTCCTGACACTGTGACAATACACGCTGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS TCA 72 bp | AACGTAGCTAATACTGACGTAGAGGAGTTTCCAAACTaGACAGCAGATACTCCTGTTTCATCTGTGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NVANTDVEEFPN*TADTPVSSVRF Trigger: GAACCTCACAGATGAAACAGGAGTATCTGCTGTTCAGTTTGGAAACTCCTCTACGTCAGTATTAGCTACGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039978.13 ENSMUST00000089745.11 ENSMUST00000103226.10 ENSMUST00000103227.8 ENSMUST00000110424.9 ENSMUST00000110425.9 |
||
| CDS GCA 72 bp | AAACACACCGGGTATAAGGCTCCTTACTTCAATTTCTaGACATTCCACCCGGCTCTCAATTATTTCCATACA | + |
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Preference number: 6 (lower is better) Translates to: KHTGYKAPYFNF*TFHPALNYFHT Trigger: TGTATGGAAATAATTGAGAGCCGGGTGGAATGTGCAGAAATTGAAGTAAGGAGCCTTATACCCGGTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039978.13 ENSMUST00000103226.10 |
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