Pregenerated sensors for GABBR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039809Ensembl transcript IDs: ENSMUST00000107749.4, ENSMUST00000205643.2
Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGGGCTaGGCCAGCTGCTGGGGACCTGGTGGCCCTGCTCACCTTCTCCCC | + |
Preference number: 1 (lower is better) Translates to: LPFLLTPCSREAEVG*ASCWGPGGPAHLLP Trigger: GGGGAGAAGGTGAGCAGGGCCACCAGGTCCCCAGCAGCTGGCCCAGCCCACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | TGGCCCTGCTCACCTTCTCCCCCAGAGTGGAGAAGGGCTGGTGTGTaGGGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGC | + |
Preference number: 1 (lower is better) Translates to: WPCSPSPPEWRRAGV*GRAPPMTCVQSAEG Trigger: GCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCCCCACACACCAGCCCTTCTCCACTCTGGGGGAGAAGGTGAGCAGGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | GGCTGGTGTGTGGGGGCGGGCACCACCGATGACGTGTGTGCAGAGTaGAGAGGGCCATTTCTGCAGAGCCCTTGCTCTGGCCACTTGGCG | + |
Preference number: 1 (lower is better) Translates to: GWCVGAGTTDDVCAE*RGPFLQSPCSGHLA Trigger: CGCCAAGTGGCCAGAGCAAGGGCTCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCCCCACACACCAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | CCCCAGAGTGGAGAAGGGCTGGTGTGTGGGGGCGGGCACCACCGATaGCGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGAGCCCTTG | + |
Preference number: 1 (lower is better) Translates to: PQSGEGLVCGGGHHR*RVCRVQRAISAEPL Trigger: CAAGGGCTCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCCCCACACACCAGCCCTTCTCCACTCTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | CATCTCTCTTCTGATGGATGTTCCCTGGGAGCATGCGCAGCTGCCTaGTCTGGTCCCCCAGCCCCAGGGCTGTGCCCGTCTGCCCTTCCT | + |
Preference number: 1 (lower is better) Translates to: HLSSDGCSLGACAAA*SGPPAPGLCPSALP Trigger: AGGAAGGGCAGACGGGCACAGCCCTGGGGCTGGGGGACCAGAGCAGGCAGCTGCGCATGCTCCCAGGGAACATCCATCAGAAGAGAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | ATACAGCCGACACAGTGGGTGCATGACAGACTGTCGGTTGCATCCTaGAGAGCACGTCTGCAGTGCGGTGCCCTGAATCCCCACAGTCCC | + |
Preference number: 1 (lower is better) Translates to: IQPTQWVHDRLSVAS*RARLQCGALNPHSP Trigger: GGGACTGTGGGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | TGGGCTGTCCTGTTCCTAGGTAGAGGGCCTTGCAGGAAGTTTCTCTaGGCCGCACTGTACCCCCAGCTTGTGGGAGGGCTGAAGGTCATG | + |
Preference number: 1 (lower is better) Translates to: WAVLFLGRGPCRKFL*AALYPQLVGGLKVM Trigger: CATGACCTTCAGCCCTCCCACAAGCTGGGGGTACAGTGCGGCCCAGAGAAACTTCCTGCAAGGCCCTCTACCTAGGAACAGGACAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | CCTCGTGAGAGTAAGACCGTCGTAGATAAGGCTCGAGATCCGTGCTaGGTCCCTCTCTGCCTGAGCGCCATTCCAGCAGTCTGGAGAGGC | + |
Preference number: 1 (lower is better) Translates to: PRESKTVVDKARDPC*VPLCLSAIPAVWRG Trigger: GCCTCTCCAGACTGCTGGAATGGCGCTCAGGCAGAGAGGGACTCAGCACGGATCTCGAGCCTTATCTACGACGGTCTTACTCTCACGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | GTGCATGACAGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTaGGGTGCCCTGAATCCCCACAGTCCCCAGAACGGGTGTTATTGT | + |
Preference number: 1 (lower is better) Translates to: VHDRLSVASCRARLQ*GALNPHSPQNGCYC Trigger: ACAATAACACCCGTTCTGGGGACTGTGGGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | GACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGGTGCCCTaGATCCCCACAGTCCCCAGAACGGGTGTTATTGTGTTAATGTGT | + |
Preference number: 1 (lower is better) Translates to: DCRLHPAEHVCSAVP*IPTVPRTGVIVLMC Trigger: ACACATTAACACAATAACACCCGTTCTGGGGACTGTGGGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | GGAAGTTTCTCTGGGCCGCACTGTACCCCCAGCTTGTGGGAGGGCTaGAGGTCATGGTCGTTACTAATACCTCACAGGTCAGAGCTGCTT | + |
Preference number: 1 (lower is better) Translates to: GSFSGPHCTPSLWEG*RSWSLLIPHRSELL Trigger: AAGCAGCTCTGACCTGTGAGGTATTAGTAACGACCATGACCTTCAGCCCTCCCACAAGCTGGGGGTACAGTGCGGCCCAGAGAAACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCACTAGCGTCACTGGAAGATaGCCTTGGGCGGAAGCCTCTAGGAAATGGACCGTGTGTTTGCTG | + |
Preference number: 1 (lower is better) Translates to: CVCVCVCVCTSVTGR*PWAEASRKWTVCLL Trigger: CAGCAAACACACGGTCCATTTCCTAGAGGCTTCCGCCCAAGGGCATCTTCCAGTGACGCTAGTGCACACACACACACACACACACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | AACCCTAAATTTGAACACAAGGATACAGCCGACACAGTGGGTGCATaGCAGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGG | + |
Preference number: 1 (lower is better) Translates to: NPKFEHKDTADTVGA*QTVGCILQSTSAVR Trigger: CCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTATCCTTGTGTTCAAATTTAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACTAGCGTCACTGGAAGATGCCCTTaGGCGGAAGCCTCTAGGAAATGGACCGTGTGTTTGCTGCATATA | + |
Preference number: 1 (lower is better) Translates to: CVCVCVCTSVTGRCP*AEASRKWTVCLLHI Trigger: TATATGCAGCAAACACACGGTCCATTTCCTAGAGGCTTCCGCCCAAGGGCATCTTCCAGTGACGCTAGTGCACACACACACACACACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | TTACCAGGAACCCTAAATTTGAACACAAGGATACAGCCGACACAGTaGGTGCATGACAGACTGTCGGTTGCATCCTGCAGAGCACGTCTG | + |
Preference number: 1 (lower is better) Translates to: LPGTLNLNTRIQPTQ*VHDRLSVASCRARL Trigger: CAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTATCCTTGTGTTCAAATTTAGGGTTCCTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTaGAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGAAT | + |
Preference number: 1 (lower is better) Translates to: AAFRISLGSKQTTHL*RRPWTVPFRLLAKN Trigger: ATTCTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | ACTAGCGTCACTGGAAGATGCCCTTGGGCGGAAGCCTCTAGGAAATaGACCGTGTGTTTGCTGCATATAAAAGAACAGAACCAGGAGATA | + |
Preference number: 1 (lower is better) Translates to: TSVTGRCPWAEASRK*TVCLLHIKEQNQEI Trigger: TATCTCCTGGTTCTGTTCTTTTATATGCAGCAAACACACGGTCCATTTCCTAGAGGCTTCCGCCCAAGGGCATCTTCCAGTGACGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | ATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTaGACGGTGCCATTCAGGCTTTTAGCAAAGAATGAACCTATCAAG | + |
Preference number: 1 (lower is better) Translates to: ISLGSKQTTHLCRRP*TVPFRLLAKNEPIK Trigger: CTTGATAGGTTCATTCTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 90 bp | CTGAATCCCCACAGTCCCCAGAACGGGTGTTATTGTGTTAATGTGTaGCATTTATCAGAGAGTAACAAACATCTCTCTTCTGATGGATGT | + |
Preference number: 1 (lower is better) Translates to: LNPHSPQNGCYCVNV*HLSESNKHLSSDGC Trigger: ACATCCATCAGAAGAGAGATGTTTGTTACTCTCTGATAAATGCCACACATTAACACAATAACACCCGTTCTGGGGACTGTGGGGATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 90 bp | GTGCACAATCTTTCTTTATCGTGTTTTCTGGGAGTAGACATTCCATaGTTAGCTCGGATGGTTCCCCTTATTACCAGGAACCCTAAATTT | + |
Preference number: 1 (lower is better) Translates to: VHNLSLSCFLGVDIP*LARMVPLITRNPKF Trigger: AAATTTAGGGTTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGAAAACACGATAAAGAAAGATTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR GCA 90 bp | GCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGGGCTGGCTTGGCCCAGCATGGTaGTGTCCCGGTGAGGCCCGG | + |
Preference number: 2 (lower is better) Translates to: ARLPFLLTPCSREAEVGWLGPAW*CPGEAR Trigger: CCGGGCCTCACCGGGACAGCACCATGCTGGGCCAAG...CCAGCCCACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTAGAAGGGCTGGTGTGTaGGGGCGGGCACCACCGATG | + |
Preference number: 2 (lower is better) Translates to: GLCPSALPADSLFQGGGSRRAGV*GRAPPM Trigger: CATCGGTGGTGCCCGCCCCCACACACCAGCCCTTCT...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | ACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGGGCTGGGCCAGCTGCTaGGGACCTGGTGGCCCTGCT | + |
Preference number: 2 (lower is better) Translates to: TTHLCRRPWTVPFRLLAKGWASC*GPGGPA Trigger: AGCAGGGCCACCAGGTCCCCAGCAGCTGGCCCAGCC...CTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | ACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGGCAGAGCCCTTGCTCTaGCCACTTGGCGAGGATAGC | + |
Preference number: 2 (lower is better) Translates to: TTHLCRRPWTVPFRLLAKAEPLL*PLGEDS Trigger: GCTATCCTCGCCAAGTGGCCAGAGCAAGGGCTCTGC...CTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | GTGACTTGCCCAAGGTCACGGAGAGAGTCTGAGGGGACTGAGGACTCAAATCCAAATCCCAGCAGCCCTTaGGCCCCCATGGGAGAGGTT | + |
Preference number: 2 (lower is better) Translates to: VTCPRSRRESEGTEDSNPNPSSP*APMGEV Trigger: AACCTCTCCCATGGGGGCCCAAGGGCTGCTGGGATT...TGGATTTGAGTCCTCAGTCCCCTCAGACTCTCTCCGTGACCTTGGGCAAGTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAGACACAGTGGGTGCATaGCAGACTGTCGGTTGCATC | + |
Preference number: 2 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPDTVGA*QTVGCI Trigger: GATGCAACCGACAGTCTGTCATGCACCCACTGTGTC...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR GCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCGGAGAGGCAGCATGGTaGCCAGCTTCTCGCCGCCGT | + |
Preference number: 2 (lower is better) Translates to: AAFRISLGSKQTTHLCRRGEAAW*PASRRR Trigger: ACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCC...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCAGTGGCAGGCGCCTTaGCCCAGCATGGTGCTGTCC | + |
Preference number: 2 (lower is better) Translates to: AAFRISLGSKQTTHLCRRQWQAP*PSMVLS Trigger: GGACAGCACCATGCTGGGCCAAGGCGCCTGCCACTG...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGACCAGGGAGGCGGAAGTaGGCTGGGCCAGCTGCTGGG | + |
Preference number: 2 (lower is better) Translates to: TYRISRQRCILWVNLEDRPGRRK*AGPAAG Trigger: CCCAGCAGCTGGCCCAGCCCACTTCCGCCTCCCTGG...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAATACAGCCGACACAGTaGGTGCATGACAGACTGTCG | + |
Preference number: 2 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPIQPTQ*VHDRLS Trigger: CGACAGTCTGTCATGCACCCACTGTGTCGGCTGTAT...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | TCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGAATGAGATCAAGTGTCCATGCAGTGCGGTGCCCTaGATCCCCACAGTCCCCAGA | + |
Preference number: 2 (lower is better) Translates to: SELLHSGKLSWMNEIKCPCSAVP*IPTVPR Trigger: TCTGGGGACTGTGGGGATTCAGGGCACCGCACTGCA...TGGACACTTGATCTCATTCATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | GTCGTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGCCATTCCAGCAGTCTaGAGAGGCAGCATGGTGCCC | + |
Preference number: 2 (lower is better) Translates to: VVTNTSQVRAASQWKAILAIPAV*RGSMVP Trigger: GGGCACCATGCTGCCTCTCCAGACTGCTGGAATGGC...CAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGCTGCTGGGGACCTGGTaGCCCTGCTCACCTTCTCCC | + |
Preference number: 2 (lower is better) Translates to: IDTMQWGKRNASFLHLILLLGTW*PCSPSP Trigger: GGGAGAAGGTGAGCAGGGCCACCAGGTCCCCAGCAG...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCGGGCACTCATAGGTTaGGGCTGGAAGGGCACTGGA | + |
Preference number: 2 (lower is better) Translates to: AAFRISLGSKQTTHLCRRRALIG*GWKGTG Trigger: TCCAGTGCCCTTCCAGCCCCAACCTATGAGTGCCCG...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | TCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGAATGAGATCAAGTGTCCACCTTCTCCCCCAGAGTaGAGAAGGGCTGGTGTGTGG | + |
Preference number: 2 (lower is better) Translates to: SELLHSGKLSWMNEIKCPPSPPE*RRAGVW Trigger: CCACACACCAGCCCTTCTCCACTCTGGGGGAGAAGG...TGGACACTTGATCTCATTCATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCTCAGAGAGACACTGGTaGCTTGCCCAAGGTCACGGA | + |
Preference number: 2 (lower is better) Translates to: AAFRISLGSKQTTHLCRRSERHW*LAQGHG Trigger: TCCGTGACCTTGGGCAAGTCACCAGTGTCTCTCTGA...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR GCA 90 bp | GTCGTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGAGCCGACACAGTGGGTaGATGACAGACTGTCGGTTG | + |
Preference number: 2 (lower is better) Translates to: VVTNTSQVRAASQWKAILSRHSG*MTDCRL Trigger: CAACCGACAGTCTGTCATGCACCCACTGTGTCGGCT...CAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAACTGATGGATGTTCCCTaGGAGCATGCGCAGCTGCCT | + |
Preference number: 2 (lower is better) Translates to: SGSRHSMISSDGSPYYQELMDVP*EHAQLP Trigger: AGGCAGCTGCGCATGCTCCCAGGGAACATCCATCAG...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 90 bp | GAAGCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTaGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAG | + |
Preference number: 2 (lower is better) Translates to: EAAFRISLGSKQTTH*CRRPWTVPFRLLAK Trigger: CTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGAGAAGAGCCTCCCTCTaGCTGGGCTGTCCTGTTCCT | + |
Preference number: 2 (lower is better) Translates to: IDTMQWGKRNASFLHLILRRASL*LGCPVP Trigger: AGGAACAGGACAGCCCAGTCAGAGGGAGGCTCTTCT...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | AGACAGAGCACAGTTCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGAGCCCCTGATTCACTTTaGTCAAAAACAAAGTCAGTG | + |
Preference number: 2 (lower is better) Translates to: RQSTVRSHKGLQTHAHLRAPDSL*SKTKSV Trigger: CACTGACTTTGTTTTTGACCAAAGTGAATCAGGGGC...TCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGAACTGTGCTCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGAAGGATAGCTGGAGTCTaGGGCCTCTCTCCTTTGTCT | + |
Preference number: 2 (lower is better) Translates to: TYRISRQRCILWVNLEDRRIAGV*GLSPLS Trigger: AGACAAAGGAGAGAGGCCTCAGACTCCAGCTATCCT...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGCAAACATCTCTCTTCTaGTGGATGTTCCCTGGGAGC | + |
Preference number: 2 (lower is better) Translates to: IDTMQWGKRNASFLHLILQTSLF*WMFPGS Trigger: GCTCCCAGGGAACATCCATCAGAAGAGAGATGTTTG...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | ATCTTGTGGGTTAACCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACTCAGGAACACAGAGATaGCTTTTAGCAGAATGCCCC | + |
Preference number: 2 (lower is better) Translates to: ILWVNLEDRAQFGVTRDYSGTQR*LLAECP Trigger: GGGGCATTCTGCTAAAAGTCATCTCTGTGTTCCTGA...GTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGGTTAACCCACAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 90 bp | CTGGAGTCTGAGGCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTaGCAAGTTTCTGACATCCCAACTCCTCTTTGTTTGCAGACGCCA | + |
Preference number: 2 (lower is better) Translates to: LESEASLLCLEFDLF*QVSDIPTPLCLQTP Trigger: TGGCGTCTGCAAACAAAGAGGAGTTGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGCCTCAGACTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGGCTATCCTGGATGAATaGGATCAAGTGTCCATCCTC | + |
Preference number: 2 (lower is better) Translates to: IDTMQWGKRNASFLHLILAILDE*DQVSIL Trigger: GAGGATGGACACTTGATCTCATTCATCCAGGATAGC...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR TCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAAGGAGTAGACATTCCATaGTTAGCTCGGATGGTTCCC | + |
Preference number: 2 (lower is better) Translates to: QEKRLIFTLDSASSGLIEGVDIP*LARMVP Trigger: GGGAACCATCCGAGCTAATCATGGAATGTCTACTCC...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAAGAAGCCTCTAGGAAATaGACCGTGTGTTTGCTGCAT | + |
Preference number: 2 (lower is better) Translates to: QEKRLIFTLDSASSGLIEEASRK*TVCLLH Trigger: ATGCAGCAAACACACGGTCCATTTCCTAGAGGCTTC...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
||
3UTR-3UTR CCA 90 bp | TCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGACAATCCAATACTTTTTTTTCCTGCTATGCTaGAGTAATATTTCTACAGGT | + |
Preference number: 2 (lower is better) Translates to: SESQGITDTRSPPTIQYFFFLLC*SNISTG Trigger: ACCTGTAGAAATATTACTCCAGCATAGCAGGAAAAA...AAAGTATTGGATTGTCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGA 42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAAAAAGCAAGGGAATACTaGTTAACACACACAGTGAGT | + |
Preference number: 2 (lower is better) Translates to: QEKRLIFTLDSASSGLIEKAREY*LTHTVS Trigger: ACTCACTGTGTGTGTTAACCAGTATTCCCTTGCTTT...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | GTGGGGGCGGGCACCACCGATGACGTGTGTGCAGAGTaGAGAGGGCCATTTCTGCAGAGCCCTTGCTCTGGC | + |
Preference number: 3 (lower is better) Translates to: VGAGTTDDVCAE*RGPFLQSPCSG Trigger: GCCAGAGCAAGGGCTCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCCCCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | GGGGCTGGAAGGGCACTGGAGGGCTACCTTCTGGAAGCCAGGGAGCCCTGGGCCATGACAGACTGTCGGTaGCATCCTGCAGAGCACGTC | + |
Preference number: 3 (lower is better) Translates to: GAGRALEGYLLEAREPWAMTDCR*HPAEHV Trigger: GACGTGCTCTGCAGGATGCAACCGACAGTCTGTCAT...GGCCCAGGGCTCCCTGGCTTCCAGAAGGTAGCCCTCCAGTGCCCTTCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | AGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTaGGGTGCCCTGAATCCCCACAGTCCCCAGAACGGG | + |
Preference number: 3 (lower is better) Translates to: RLSVASCRARLQ*GALNPHSPQNG Trigger: CCCGTTCTGGGGACTGTGGGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | GTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGGTaGCCTGAATCCCCACAGTCCCCAGAACGGGTGTTA | + |
Preference number: 3 (lower is better) Translates to: VGCILQSTSAVR*PESPQSPERVL Trigger: TAACACCCGTTCTGGGGACTGTGGGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | ATAAGGCTCGAGATCCGTGCTGAGTCCCTCTCTGCCTaGGCGCCATTCCAGCAGTCTGGAGAGGCAGCATGG | + |
Preference number: 3 (lower is better) Translates to: IRLEIRAESLSA*APFQQSGEAAW Trigger: CCATGCTGCCTCTCCAGACTGCTGGAATGGCGCTCAGGCAGAGAGGGACTCAGCACGGATCTCGAGCCTTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | ACACAGTGGGTGCATGACAGACTGTCGGTTGCATCCTaGAGAGCACGTCTGCAGTGCGGTGCCCTGAATCCC | + |
Preference number: 3 (lower is better) Translates to: TQWVHDRLSVAS*RARLQCGALNP Trigger: GGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | TCTGACTGGGCTGTCCTGTTCCTAGGTAGAGGGCCTTaGAGGAAGTTTCTCTGGGCCGCACTGTACCCCCAG | + |
Preference number: 3 (lower is better) Translates to: SDWAVLFLGRGP*RKFLWAALYPQ Trigger: CTGGGGGTACAGTGCGGCCCAGAGAAACTTCCTGCAAGGCCCTCTACCTAGGAACAGGACAGCCCAGTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | AGAGTGCAGAGGGCCATTTCTGCAGAGCCCTTGCTCTaGCCACTTGGCGAGGATAGCTGGAGTCTGAGGCCT | + |
Preference number: 3 (lower is better) Translates to: RVQRAISAEPLL*PLGEDSWSLRP Trigger: AGGCCTCAGACTCCAGCTATCCTCGCCAAGTGGCCAGAGCAAGGGCTCTGCAGAAATGGCCCTCTGCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | AGTAAGACCGTCGTAGATAAGGCTCGAGATCCGTGCTaGGTCCCTCTCTGCCTGAGCGCCATTCCAGCAGTC | + |
Preference number: 3 (lower is better) Translates to: SKTVVDKARDPC*VPLCLSAIPAV Trigger: GACTGCTGGAATGGCGCTCAGGCAGAGAGGGACTCAGCACGGATCTCGAGCCTTATCTACGACGGTCTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | ACCTATCAAGGACTGTCAGAAGAGCCTCCCTCTGACTaGGCTGTCCTGTTCCTAGGTAGAGGGCCTTGCAGG | + |
Preference number: 3 (lower is better) Translates to: TYQGLSEEPPSD*AVLFLGRGPCR Trigger: CCTGCAAGGCCCTCTACCTAGGAACAGGACAGCCCAGTCAGAGGGAGGCTCTTCTGACAGTCCTTGATAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | TCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGAATGAGATCAAGTGTCCACCAGTGGCAGGCGCCTaGGCCCAGCATGGTGCTGTC | + |
Preference number: 3 (lower is better) Translates to: SELLHSGKLSWMNEIKCPPVAGA*AQHGAV Trigger: GACAGCACCATGCTGGGCCAAGGCGCCTGCCACTGG...TGGACACTTGATCTCATTCATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | GAGAGTCTGAGGGGACTGAGGACTCAAATCCAGGTCTaGCTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTC | + |
Preference number: 3 (lower is better) Translates to: ESLRGLRTQIQV*LPGRCSLGFNF Trigger: GAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATTTGAGTCCTCAGTCCCCTCAGACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | AGAGTAACAAACATCTCTCTTCTGATGGATGTTCCCTaGGAGCATGCGCAGCTGCCTGCTCTGGTCCCCCAG | + |
Preference number: 3 (lower is better) Translates to: RVTNISLLMDVP*EHAQLPALVPQ Trigger: CTGGGGGACCAGAGCAGGCAGCTGCGCATGCTCCCAGGGAACATCCATCAGAAGAGAGATGTTTGTTACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | TTTGAACACAAGGATACAGCCGACACAGTGGGTGCATaGCAGACTGTCGGTTGCATCCTGCAGAGCACGTCT | + |
Preference number: 3 (lower is better) Translates to: FEHKDTADTVGA*QTVGCILQSTS Trigger: AGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTATCCTTGTGTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAACCTTGCTCTGGCCACTaGGCGAGGATAGCTGGAGTC | + |
Preference number: 3 (lower is better) Translates to: SGSRHSMISSDGSPYYQEPCSGH*ARIAGV Trigger: GACTCCAGCTATCCTCGCCAAGTGGCCAGAGCAAGG...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | AGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGGTGCCCTGAATCCCGAGTTTGATTTGTTTTaGCAAGTTTCTGACATCCCA | + |
Preference number: 3 (lower is better) Translates to: RLSVASCRARLQCGALNPEFDLF*QVSDIP Trigger: TGGGATGTCAGAAACTTGCAAAAACAAATCAAACTC...GGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | CCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGAATaGACCTATCAAGGACTGTCAGAAGAGCCTCCCTCT | + |
Preference number: 3 (lower is better) Translates to: PLDGAIQAFSKE*TYQGLSEEPPS Trigger: AGAGGGAGGCTCTTCTGACAGTCCTTGATAGGTTCATTCTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | GGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTaGACGGTGCCATTCAGGCTTTTAGCAAAGAATGAA | + |
Preference number: 3 (lower is better) Translates to: GSKQTTHLCRRP*TVPFRLLAKNE Trigger: TTCATTCTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | GGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATaGATGAGATCAAGTGTCCATCCTCAGAGTGACCCT | + |
Preference number: 3 (lower is better) Translates to: GQSCFTVESYPG*MRSSVHPQSDP Trigger: AGGGTCACTCTGAGGATGGACACTTGATCTCATTCATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | AGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTaGAGACGCCCCTGGACGGTGCCATTCAGGCTTTTA | + |
Preference number: 3 (lower is better) Translates to: RISLGSKQTTHL*RRPWTVPFRLL Trigger: TAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | ACCCTAAATTTGAACACAAGGATACAGCCGACACAGTaGGTGCATGACAGACTGTCGGTTGCATCCTGCAGA | + |
Preference number: 3 (lower is better) Translates to: TLNLNTRIQPTQ*VHDRLSVASCR Trigger: TCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTATCCTTGTGTTCAAATTTAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | ATCTTGTGGGTTAACCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACCCAGGAACCCTAAATTaGAACACAAGGATACAGCCG | + |
Preference number: 3 (lower is better) Translates to: ILWVNLEDRAQFGVTRDYPGTLN*NTRIQP Trigger: CGGCTGTATCCTTGTGTTCAAATTTAGGGTTCCTGG...GTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGGTTAACCCACAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR-3UTR CAA 90 bp | ATCTTGTGGGTTAACCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACGAGAAGGACATCAACTaGACCTGTGATGTGTTGACA | + |
Preference number: 3 (lower is better) Translates to: ILWVNLEDRAQFGVTRDYEKDIN*TCDVLT Trigger: TGTCAACACATCACAGGTCAAGTTGATGTCCTTCTC...GTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGGTTAACCCACAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR GCA 72 bp | TGTGTTCCTGACTGCAGTGGTCTGGAAAGAGATTATTaGCTGCCCGTTGAAGCTGCCTTTAGGATTTCTTTA | + |
Preference number: 3 (lower is better) Translates to: CVPDCSGLERDY*LPVEAAFRISL Trigger: TAAAGAAATCCTAAAGGCAGCTTCAACGGGCAGGCAATAATCTCTTTCCAGACCACTGCAGTCAGGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | AAAAGCAAGGGAATACTGGTTAACACACACAGTGAGTaGCAACATGGAGTTTGGGTGCCTAAACAGAGAAGG | + |
Preference number: 3 (lower is better) Translates to: KSKGILVNTHSE*QHGVWVPKQRR Trigger: CCTTCTCTGTTTAGGCACCCAAACTCCATGTTGTCACTCACTGTGTGTGTTAACCAGTATTCCCTTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR TCA 72 bp | CTTTCTTTATCGTGTTTTCTGGGAGTAGACATTCCATaGTTAGCTCGGATGGTTCCCCTTATTACCAGGAAC | + |
Preference number: 3 (lower is better) Translates to: LSLSCFLGVDIP*LARMVPLITRN Trigger: GTTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGAAAACACGATAAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CCA 72 bp | CACAGTCCCCAGAACGGGTGTTATTGTGTTAATGTGTaGCATTTATCAGAGAGTAACAAACATCTCTCTTCT | + |
Preference number: 3 (lower is better) Translates to: HSPQNGCYCVNV*HLSESNKHLSS Trigger: AGAAGAGAGATGTTTGTTACTCTCTGATAAATGCCACACATTAACACAATAACACCCGTTCTGGGGACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 72 bp | CTTCTCGCCGCCGTCAGCGTGCCAGTGGCAGGCGCCTaGGCCCAGCATGGTGCTGTCCCGGTGAGGCCCGGC | + |
Preference number: 4 (lower is better) Translates to: LLAAVSVPVAGA*AQHGAVPVRPG Trigger: GCCGGGCCTCACCGGGACAGCACCATGCTGGGCCAAGGCGCCTGCCACTGGCACGCTGACGGCGGCGAGAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GGGGCTGGAAGGGCACTGGAGGGCTACCTTCTGGAAGCCAGGGAGCCCTGGGCCGCACGCCGCGCCCGATaGTGCCCTTGGCCACCTCCT | + |
Preference number: 4 (lower is better) Translates to: GAGRALEGYLLEAREPWAARRAR*CPWPPP Trigger: AGGAGGTGGCCAAGGGCAGCATCGGGCGCGGCGTGC...GGCCCAGGGCTCCCTGGCTTCCAGAAGGTAGCCCTCCAGTGCCCTTCCAGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GGGGCTGGAAGGGCACTGGAGGGCTACCTTCTGGAAGCCAGGGAGCCCTGGGCCACAGGCCCGAGACCATaGCTCGGAAGGAGGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: GAGRALEGYLLEAREPWATGPRP*LGRRVV Trigger: TACCACCCTCCTTCCGAGTCATGGTCTCGGGCCTGT...GGCCCAGGGCTCCCTGGCTTCCAGAAGGTAGCCCTCCAGTGCCCTTCCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGGGCTGGCGTACCAGCCCGGGATaGTCCACTGGTACTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: ARLPFLLTPCSREAEVGWRTSPG*STGTCC Trigger: GCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACG...CCAGCCCACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGGGCTGGAGGGGGTCCACAGCCTaGCAGCAGATCAGGATGCAC | + |
Preference number: 4 (lower is better) Translates to: ARLPFLLTPCSREAEVGWRGSTA*QQIRMH Trigger: GTGCATCCTGATCTGCTGGCAGGCTGTGGACCCCCT...CCAGCCCACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCATGCGGATCTGCTCGATaGCTAGCTCCACGGCGGGGA | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPCGSAR*LAPRRG Trigger: TCCCCGCCGTGGAGCTAGCCATCGAGCAGATCCGCA...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTCGATGTAGCCTTCCATaGCAGCCAGGAGGCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: GLCPSALPADSLFQGGGSRCSLP*QPGGSC Trigger: GCAGGAGCCTCCTGGCTGCCATGGAAGGCTACATCG...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCAGCAGTGTTCCAGCAGTaGGCGGATGGAGATGTCCCG | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPAVFQQ*ADGDVP Trigger: CGGGACATCTCCATCCGCCCACTGCTGGAACACTGC...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGACTCGGAAGGAGGGTaGTACGTGTCTGTGGCGAGG | + |
Preference number: 4 (lower is better) Translates to: GLCPSALPADSLFQGGGSDSEGG*YVSVAR Trigger: CCTCGCCACAGACACGTACCACCCTCCTTCCGAGTC...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | CTTCTCGCCGCCGTCAGCGTGCCAGTGGCAGGCGCCTTGGCCCAGCATGGTGCTGAAGCTCTCCGTGTCTaGGATCTCAATGTCTTCCCC | + |
Preference number: 4 (lower is better) Translates to: LLAAVSVPVAGALAQHGAEALRV*DLNVFP Trigger: GGGGAAGACATTGAGATCTCAGACACGGAGAGCTTC...AGCACCATGCTGGGCCAAGGCGCCTGCCACTGGCACGCTGACGGCGGCGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCACAAACTGGCCAAGGATaGTCCGCACGTCGTTCCCCT | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPQTGQG*SARRSP Trigger: AGGGGAACGACGTGCGGATCATCCTTGGCCAGTTTG...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCACGGTGGTTTTCTGACTaGAGTCCCTCCAGGCGTGAC | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPRWFSD*SPSRRD Trigger: GTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCG...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGGCTGGAAGGGCACTGGAGGGCTACCTTCTGGAAGCCAGGGAGCCCTGGGCCCAATGCCGAGCCAGATaGTCATGTGGGTGTTTTCGC | + |
Preference number: 4 (lower is better) Translates to: GAGRALEGYLLEAREPWAQCRAR*SCGCFR Trigger: GCGAAAACACCCACATGACCATCTGGCTCGGCATTG...GGCCCAGGGCTCCCTGGCTTCCAGAAGGTAGCCCTCCAGTGCCCTTCCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGAGCAGGGTCTTGGCGATaGCCCAGATGCCATCGTAGG | + |
Preference number: 4 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRAGSWR*PRCHRR Trigger: CCTACGATGGCATCTGGGTCATCGCCAAGACCCTGC...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGAGATGTCCCGTCCTGCTaGGTCCGGCTCCATGCTGTA | + |
Preference number: 4 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRDVPSC*VRLHAV Trigger: TACAGCATGGAGCCGGACCCAGCAGGACGGGACATC...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTACCAGGTTCCAGCCTTaGAGGGATTCCGCGATGATA | + |
Preference number: 4 (lower is better) Translates to: GLCPSALPADSLFQGGGSTRFQP*RDSAMI Trigger: TATCATCGCGGAATCCCTCCAAGGCTGGAACCTGGT...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGACAAGAACAGGCGTGGTaGCGGCGAAGGAAAGCTGCA | + |
Preference number: 4 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRQEQAW*RRRKAA Trigger: TGCAGCTTTCCTTCGCCGCCACCACGCCTGTTCTTG...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 72 bp | TACAGCCGACACAGTGGGTGCATGACAGACTGTCGGTaGCATCCTGCAGAGCACGTCTGCAGTGCGGTGCCC | + |
Preference number: 4 (lower is better) Translates to: YSRHSGCMTDCR*HPAEHVCSAVP Trigger: GGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCTGTCATGCACCCACTGTGTCGGCTGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCATCCCTGAGATGGTCTTaGTTTGTTTGGAGCTCAGGG | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPSLRWS*FVWSSG Trigger: CCCTGAGCTCCAAACAAATCAAGACCATCTCAGGGA...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCAAGGGGCTTGACATCTTaGTCAGCTTTTGGTTCCGGT | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPRGLTS*SAFGSG Trigger: ACCGGAACCAAAAGCTGATCAAGATGTCAAGCCCCT...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTTTCGCTGCCATGTTCTaGTCAAACTGGCCAAGGATG | + |
Preference number: 4 (lower is better) Translates to: GLCPSALPADSLFQGGGSFAAMF*SNWPRM Trigger: CATCCTTGGCCAGTTTGACCAGAACATGGCAGCGAA...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | AGCAGTCTGGAGAGGCAGCATGGTGCCCAGCTTCTCGCCGCCGTCAGCGTGCCAGAGATCTTCCGAAGCTaGTCTAGAATGATGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: SSLERQHGAQLLAAVSVPEIFRS*SRMMVL Trigger: CAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTC...TGGCACGCTGACGGCGGCGAGAAGCTGGGCACCATGCTGCCTCTCCAGACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGCCAGCAGTGGGCGGATaGAGATGTCCCGTCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKPAVGG*RCPVLL Trigger: CAGCAGGACGGGACATCTCCATCCGCCCACTGCTGG...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGCCTGGTTCACGCTGGTaGCTGAGGTGGAGGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKPGSRW*LRWRSS Trigger: CGAAGACCTCCACCTCAGTCACCAGCGTGAACCAGG...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAGACTCGTTGCGGATCTaGTCGATGGCTAGCTCCACG | + |
Preference number: 4 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPDSLRI*SMASST Trigger: CGTGGAGCTAGCCATCGAGCAGATCCGCAACGAGTC...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GTGACTTGCCCAAGGTCACGGAGAGAGTCTGAGGGGACTGAGGACTCAAATCCACAGCAGCTTCAGGATTaGCGGGTTCACCGCGTTGTC | + |
Preference number: 4 (lower is better) Translates to: VTCPRSRRESEGTEDSNPQQLQD*RVHRVV Trigger: GACAACGCGGTGAACCCGGCAATCCTGAAGCTGCTG...TGGATTTGAGTCCTCAGTCCCCTCAGACTCTCTCCGTGACCTTGGGCAAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGAAGGTCTTTGCAAACATaGCTCCAAAGGCGGTTGTGT | + |
Preference number: 4 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRRSLQT*LQRRLC Trigger: ACACAACCGCCTTTGGAGCCATGTTTGCAAAGACCT...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGGTGCCCTGAATCCCCAGAGTGATGAGCTTTaGCACAAACACCAGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: RLSVASCRARLQCGALNPQSDEL*HKHQAE Trigger: CTCTGCCTGGTGTTTGTGCCAAAGCTCATCACTCTG...GGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGACTGTGGAGTCTTCCCTaGGATGGTCTTGATTTGTTT | + |
Preference number: 4 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRLWSLP*DGLDLF Trigger: AAACAAATCAAGACCATCTCAGGGAAGACTCCACAG...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | ACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGTGGAATCGCCTGTTCTaGGTGGCTGCGTCAGGGTTT | + |
Preference number: 4 (lower is better) Translates to: TTHLCRRPWTVPFRLLAKWNRLF*VAASGF Trigger: AAACCCTGACGCAGCCACTCAGAACAGGCGATTCCA...CTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCAGCCAGGAGGCTCCTaGGCAGGCAGCGTGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: AAFRISLGSKQTTHLCRRQPGGS*AGSVRS Trigger: ACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTG...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGAAGTCCTGGATCCGCTaGTGCCTGCTACTGGCATGC | + |
Preference number: 4 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKKSWIR*CLLLAC Trigger: GCATGCCAGTAGCAGGCACCAGCGGATCCAGGACTT...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GTGACTTGCCCAAGGTCACGGAGAGAGTCTGAGGGGACTGAGGACTCAAATCCAAACTGCACGTTGGGCTaGTCACGTGTCAGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: VTCPRSRRESEGTEDSNPNCTLG*SRVRKE Trigger: CTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTT...TGGATTTGAGTCCTCAGTCCCCTCAGACTCTCTCCGTGACCTTGGGCAAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GTCGTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGGAGATGTCCCGTCCTaGTGGGTCCGGCTCCATGCT | + |
Preference number: 4 (lower is better) Translates to: VVTNTSQVRAASQWKAILGDVPS*WVRLHA Trigger: AGCATGGAGCCGGACCCAGCAGGACGGGACATCTCC...CAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AGACAGAGCACAGTTCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGATGCAGAACTGCACGTTaGGCTGGTCACGTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: RQSTVRSHKGLQTHAHLRCRTAR*AGHVSG Trigger: TCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCA...TCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGAACTGTGCTCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGTAGGGGCGCAGGAGTaGCTCGTTGCGGATCTGCTC | + |
Preference number: 4 (lower is better) Translates to: VTNTSQVRAASQWKAILDVGAQE*LVADLL Trigger: GAGCAGATCCGCAACGAGTCACTCCTGCGCCCCTAC...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | AGACAGAGCACAGTTCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGAGTCTTTGCATGTTCTTaGGGGCTCGGTCGTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: RQSTVRSHKGLQTHAHLRVFACS*GLGRVP Trigger: TGGAACACGACCGAGCCCTCAAGAACATGCAAAGAC...TCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGAACTGTGCTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GCTGCCTTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCAGCCGGCGCTGGATGTaGTCTGGGGAGTTGATGTCC | + |
Preference number: 4 (lower is better) Translates to: AAFRISLGSKQTTHLCRRSRRWM*SGELMS Trigger: GGACATCAACTCCCCAGAGCACATCCAGCGCCGGCT...GCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | ATCTTGTGGGTTAACCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACGTCTCCATGGCCCTCTaGAGGGTCTTGGCGATGACC | + |
Preference number: 4 (lower is better) Translates to: ILWVNLEDRAQFGVTRDYVSMAL*RVLAMT Trigger: GGTCATCGCCAAGACCCTGCAGAGGGCCATGGAGAC...GTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGGTTAACCCACAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGAGCCAGATGGTCATGTaGGTGTTTTCGCAGTGTTCC | + |
Preference number: 4 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKSQMVM*VFSQCS Trigger: GGAACACTGCGAAAACACCCACATGACCATCTGGCT...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCACTTGTAGCTGCATGGTaGCTTCTTCCAAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPLVAAW*LLPSLC Trigger: ACAAAGACTTGGAAGAAGTCACCATGCAGCTACAAG...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAAGGATCCGCTGGTGCCTaGTACTGGCATGCAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: SGSRHSMISSDGSPYYQEGSAGA*YWHAVS Trigger: AGACACTGCATGCCAGTAGCAGGCACCAGCGGATCC...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | CAACTCCTCTTTGTTTGCAGACGCCAAGGAGAAGTCATTGCCATTCCTCTCCCTGCCAGCAGATCAGGATaGACAGATCGATCAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: QLLFVCRRQGEVIAIPLPASRSG*TDRSAA Trigger: TGCTGCTGATCGATCTGTGCATCCTGATCTGCTGGC...AGGGAGAGGAATGGCAATGACTTCTCCTTGGCGTCTGCAAACAAAGAGGAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGAGGTGGTACGTGTCTGTaGCGAGGGCTGGCTGTAGGG | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRGGTCL*RGLAVG Trigger: CCCTACAGCCAGCCCTCGCCACAGACACGTACCACC...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GTCGTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGTGTGGTCTGTGTAGTTaGAGTCCTGGATCCGCTGGT | + |
Preference number: 4 (lower is better) Translates to: VVTNTSQVRAASQWKAILCGLCS*SPGSAG Trigger: ACCAGCGGATCCAGGACTTCAACTACACAGACCACA...CAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAACGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | TCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGAATGAGATCAAGTGTCCAGCAGGAGTGACTCGTTaGGGATCTGCTCGATGGCTA | + |
Preference number: 4 (lower is better) Translates to: SELLHSGKLSWMNEIKCPAGVTR*GSARWL Trigger: TAGCCATCGAGCAGATCCGCAACGAGTCACTCCTGC...TGGACACTTGATCTCATTCATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATGATCGATCAGCAGCATaGCCCCCACAATCACGAGCA | + |
Preference number: 4 (lower is better) Translates to: VTNTSQVRAASQWKAILDDRSAA*PPQSRA Trigger: TGCTCGTGATTGTGGGGGGCATGCTGCTGATCGATC...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGACCGCAAGAACAGGCGTaGTGGCGGCGAAGGAAAGCT | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRPQEQA*WRRRKA Trigger: AGCTTTCCTTCGCCGCCACCACGCCTGTTCTTGCGG...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGCATGCAGTGTCTCCATaGCCCTCTGCAGGGTCTTGG | + |
Preference number: 4 (lower is better) Translates to: IDTMQWGKRNASFLHLILHAVSP*PSAGSW Trigger: CCAAGACCCTGCAGAGGGCCATGGAGACACTGCATG...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 72 bp | TTTAGGATTTCTTTAGGGAGTAAGCAAACCACGCATTaGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTT | + |
Preference number: 4 (lower is better) Translates to: FRISLGSKQTTH*CRRPWTVPFRL Trigger: AAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGAAATCCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | GCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTTGCAAGTTTCTGACATCCCATTGTGTAGCCCACGGTaGGAATCCAGGTCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: ASLLCLEFDLFLQVSDIPLCSPR*ESRSGP Trigger: CGGTCCGGACCTGGATTCTCACCGTGGGCTACACAA...TGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | TCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGACAATCCAATACTTTTGTAGGCGTAGACAATaGCGAGCCAGATGGTCATGT | + |
Preference number: 4 (lower is better) Translates to: SESQGITDTRSPPTIQYFCRRRQ*RARWSC Trigger: ACATGACCATCTGGCTCGGCATTGTCTACGCCTACA...AAAGTATTGGATTGTCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGAGCCACGATGCAGAACTaGACGTTGGGCTGGTCACGT | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRATMQN*TLGWSR Trigger: ACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGC...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | AATGTGTGGCATTTATCAGAGAGTAACAAACATCTCTCTTCTGATGGATGTTCCCGTCCACGCCTCCAATaGACGGGAGGTAGGCGTGGT | + |
Preference number: 4 (lower is better) Translates to: NVWHLSESNKHLSSDGCSRPRLQ*TGGRRG Trigger: ACCACGCCTACCTCCCGTCCATTGGAGGCGTGGACG...GGAACATCCATCAGAAGAGAGATGTTTGTTACTCTCTGATAAATGCCACACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTTGCAAGTTTCTGACATCCCATCCTGGATCCGCTGGTaGCTGCTACTGGCATGCAGT | + |
Preference number: 4 (lower is better) Translates to: ASLLCLEFDLFLQVSDIPSWIRW*LLLACS Trigger: ACTGCATGCCAGTAGCAGGCACCAGCGGATCCAGGA...TGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTTGCAAGTTTCTGACATCCCAACCCATGGAACTTGCTaGGCCCTACACCCGAACGCT | + |
Preference number: 4 (lower is better) Translates to: ASLLCLEFDLFLQVSDIPTHGTC*ALHPNA Trigger: AGCGTTCGGGTGTAGGGCCCAGCAAGTTCCATGGGT...TGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAAGCTGGTGCCTGCTACTaGCATGCAGTGTCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEAGACY*HAVSPW Trigger: CCATGGAGACACTGCATGCCAGTAGCAGGCACCAGC...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | GTCGTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGACCAAAGAGGAAGATaGATGCATAGGACAGCATCC | + |
Preference number: 4 (lower is better) Translates to: VVTNTSQVRAASQWKAILDQRGR*MHRTAS Trigger: GGATGCTGTCCTATGCATCCATCTTCCTCTTTGGTC...CAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAACGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | CAACTCCTCTTTGTTTGCAGACGCCAAGGAGAAGTCATTGCCATTCCTCTCCCTTCATTTTCACATTTTTaGAGATGGCATGGACCCTCC | + |
Preference number: 4 (lower is better) Translates to: QLLFVCRRQGEVIAIPLPSFSHF*RWHGPS Trigger: GGAGGGTCCATGCCATCTTCAAAAATGTGAAAATGA...AGGGAGAGGAATGGCAATGACTTCTCCTTGGCGTCTGCAAACAAAGAGGAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAATCTTCTGGTTCTGTGTaGACTGGAATCGCCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: SGSRHSMISSDGSPYYQESSGSV*TGIACS Trigger: AGAACAGGCGATTCCAGTTCACACAGAACCAGAAGA...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAACCTGTTCTGAGTGGCTaGGTCAGGGTTTGTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEPVLSG*VRVCPQ Trigger: CTGAGGACAAACCCTGACGCAGCCACTCAGAACAGG...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGATGTTCTGGTCAAACTaGCCAAGGATGATCCGCACG | + |
Preference number: 4 (lower is better) Translates to: IDTMQWGKRNASFLHLILMFWSN*PRMIRT Trigger: CGTGCGGATCATCCTTGGCCAGTTTGACCAGAACAT...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAAATCGCCTGTTCTGAGTaGCTGCGTCAGGGTTTGTCC | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEIACSE*LRQGLS Trigger: GGACAAACCCTGACGCAGCCACTCAGAACAGGCGAT...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGAGGCTTTCAGTCCCTTTaGATTGTCACACTCGGTGTC | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRGFQSL*IVTLGV Trigger: GACACCGAGTGTGACAATGCAAAGGGACTGAAAGCC...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAACCTCTATGGGGTCTTTaGATGTTCTTGAGGGCTCGG | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEPLWGL*MFLRAR Trigger: CCGAGCCCTCAAGAACATGCAAAGACCCCATAGAGG...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | CAACTCCTCTTTGTTTGCAGACGCCAAGGAGAAGTCATTGCCATTCCTCTCCCTCCAAACACCATCAAATaGTTCGGCCCATACTTTATT | + |
Preference number: 4 (lower is better) Translates to: QLLFVCRRQGEVIAIPLPPNTIK*FGPYFI Trigger: AATAAAGTATGGGCCGAACCATTTGATGGTGTTTGG...AGGGAGAGGAATGGCAATGACTTCTCCTTGGCGTCTGCAAACAAAGAGGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAATGGTGCAGGGATCATTaGAGAAGCTCTCCGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEWCRDH*RSSPCL Trigger: CAGACACGGAGAGCTTCTCCAATGATCCCTGCACCA...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGATTCATTCGTAGGCGGTaGTTTTCTGACTGCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRFIRRR*FSDCSP Trigger: GGGACTGCAGTCAGAAAACCACCGCCTACGAATGAA...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | ATCTTGTGGGTTAACCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACCGGCCCATACTTTATTaGATCATAGAAGGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: ILWVNLEDRAQFGVTRDYRPILY*IIEGFQ Trigger: CTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCG...GTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGGTTAACCCACAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR GCA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATTATTCTCTTTCGTATTaGTGTGGAGTCTTCCCTGAG | + |
Preference number: 4 (lower is better) Translates to: VTNTSQVRAASQWKAILDYSLSY*CGVFPE Trigger: CTCAGGGAAGACTCCACAGCAATACGAAAGAGAATA...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR TCA 90 bp | ACCTACAGGATCAGTAGACAGAGATGTATCTTGTGGGTTAACCTAGAAGACAGATTCAAAGGTCTTTTCTaGGACGAAGGATCCATCGAG | + |
Preference number: 4 (lower is better) Translates to: TYRISRQRCILWVNLEDRFKGLF*DEGSIE Trigger: CTCGATGGATCCTTCGTCTCAGAAAAGACCTTTGAA...TCTGTCTTCTAGGTTAACCCACAAGATACATCTCTGTCTACTGATCCTGTAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAAATCTTGATCAGCTTTTaGTTCCGGTTCTTGATGTTG | + |
Preference number: 4 (lower is better) Translates to: SGSRHSMISSDGSPYYQEILISF*FRFLML Trigger: CAACATCAAGAACCGGAACCAAAAGCTGATCAAGAT...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CCA 90 bp | CAAGAGAAACGCCTCATTTTTACACTTGATTCTGCCAGTTCCGGTCTAATTGAATTTTTGAAGATGGCATaGACCCTCCAGGTCTTTGCA | + |
Preference number: 4 (lower is better) Translates to: QEKRLIFTLDSASSGLIEFLKMA*TLQVFA Trigger: TGCAAAGACCTGGAGGGTCCATGCCATCTTCAAAAA...TTCAATTAGACCGGAACTGGCAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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3UTR CAA 72 bp | GAGGCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTaGCAAGTTTCTGACATCCCAACTCCTCTTTGTTTG | + |
Preference number: 4 (lower is better) Translates to: EASLLCLEFDLF*QVSDIPTPLCL Trigger: CAAACAAAGAGGAGTTGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | CCAGGAAGTAGGGGCGCAGGAGTGACTCGTTGCGGATCTGCTCGATaGCTAGCTCCACGGCGGGGAGCACGCCGCGCCCGATGCTGCCCT | + |
Preference number: 5 (lower is better) Translates to: PGSRGAGVTRCGSAR*LAPRRGARRARCCP Trigger: AGGGCAGCATCGGGCGCGGCGTGCTCCCCGCCGTGGAGCTAGCCATCGAGCAGATCCGCAACGAGTCACTCCTGCGCCCCTACTTCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | GCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTTGGCCTCCACGTaGACCTGTTCCCACCACGCAGGCTCGTACCAGCCCGGGATGATC | + |
Preference number: 5 (lower is better) Translates to: ARRLLRRQREELAST*TCSHHAGSYQPGMI Trigger: GATCATCCCGGGCTGGTACGAGCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | CGTAGAGTCGCAGGTCCAGGAAGTAGGGGCGCAGGAGTGACTCGTTaGGGATCTGCTCGATGGCTAGCTCCACGGCGGGGAGCACGCCGC | + |
Preference number: 5 (lower is better) Translates to: RRVAGPGSRGAGVTR*GSARWLAPRRGARR Trigger: GCGGCGTGCTCCCCGCCGTGGAGCTAGCCATCGAGCAGATCCGCAACGAGTCACTCCTGCGCCCCTACTTCCTGGACCTGCGACTCTACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | ACCCCAGTCAGGTCGTTCCTCACCTCGGAGAAGCGCTGCACGTCCTaGGTGAGTGTGCCCACGCGCCGCCAGCGGAAGTGCTTCAGCAGC | + |
Preference number: 5 (lower is better) Translates to: TPVRSFLTSEKRCTS*VSVPTRRQRKCFSS Trigger: GCTGCTGAAGCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCGCTTCTCCGAGGTGAGGAACGACCTGACTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | CTTCCATGGCAGCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTTaGCCTCCACGTGCACCTGTTCCCACCACGCAGGCTCGTACCAGC | + |
Preference number: 5 (lower is better) Translates to: LPWQPGGSCAGSVRS*PPRAPVPTTQARTS Trigger: GCTGGTACGAGCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | GATGTAGCCTTCCATGGCAGCCAGGAGGCTCCTGCGCAGGCAGCGTaGGGAGTTGGCCTCCACGTGCACCTGTTCCCACCACGCAGGCTC | + |
Preference number: 5 (lower is better) Translates to: DVAFHGSQEAPAQAA*GVGLHVHLFPPRRL Trigger: GAGCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAGGCTACATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | CGCTGCACGTCCTGCGTGAGTGTGCCCACGCGCCGCCAGCGGAAGTaGTTCAGCAGCTTCAGGATTGCCGGGTTCACCGCGTTGTCTGAG | + |
Preference number: 5 (lower is better) Translates to: RCTSCVSVPTRRQRK*FSSFRIAGFTALSE Trigger: CTCAGACAACGCGGTGAACCCGGCAATCCTGAAGCTGCTGAAGCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | CAGTCAGGTCGTTCCTCACCTCGGAGAAGCGCTGCACGTCCTGCGTaGGTGTGCCCACGCGCCGCCAGCGGAAGTGCTTCAGCAGCTTCA | + |
Preference number: 5 (lower is better) Translates to: QSGRSSPRRSAARPA*VCPRAASGSASAAS Trigger: TGAAGCTGCTGAAGCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCGCTTCTCCGAGGTGAGGAACGACCTGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | CGAAGTCCACTCCGATGTAGCCTTCCATGGCAGCCAGGAGGCTCCTaGGCAGGCAGCGTGAGGAGTTGGCCTCCACGTGCACCTGTTCCC | + |
Preference number: 5 (lower is better) Translates to: RSPLRCSLPWQPGGS*AGSVRSWPPRAPVP Trigger: GGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAGGCTACATCGGAGTGGACTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | TACAGGCCCGAGACCATGACTCGGAAGGAGGGTGGTACGTGTCTGTaGCGAGGGCTGGCTGTAGGGCTGACACAGGGGCTGACGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: YRPETMTRKEGGTCL*RGLAVGLTQGLTQL Trigger: CAGCTGCGTCAGCCCCTGTGTCAGCCCTACAGCCAGCCCTCGCCACAGACACGTACCACCCTCCTTCCGAGTCATGGTCTCGGGCCTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GGGGCTGGAAGGGCACTGGAGGGCTACCTTCTGGAAGCCAGGGAGCCCTGGGCCGGACCCTCCAGGTCTTaGCAAACATGGCTCCAAAGG | + |
Preference number: 5 (lower is better) Translates to: GAGRALEGYLLEAREPWAGPSRS*QTWLQR Trigger: CCTTTGGAGCCATGTTTGCAAAGACCTGGAGGGTCC...GGCCCAGGGCTCCCTGGCTTCCAGAAGGTAGCCCTCCAGTGCCCTTCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | GTTTGGAGCTCAGGGGCTCGAAGTCCACTCCGATGTAGCCTTCCATaGCAGCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTTGGCCT | + |
Preference number: 5 (lower is better) Translates to: VWSSGARSPLRCSLP*QPGGSCAGSVRSWP Trigger: AGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAGGCTACATCGGAGTGGACTTCGAGCCCCTGAGCTCCAAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | GCCGAGCCAGATGGTCATGTGGGTGTTTTCGCAGTGTTCCAGCAGTaGGCGGATGGAGATGTCCCGTCCTGCTGGGTCCGGCTCCATGCT | + |
Preference number: 5 (lower is better) Translates to: AEPDGHVGVFAVFQQ*ADGDVPSCWVRLHA Trigger: AGCATGGAGCCGGACCCAGCAGGACGGGACATCTCCATCCGCCCACTGCTGGAACACTGCGAAAACACCCACATGACCATCTGGCTCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GGGCTGTGCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTCTCATCCCAATGTACTaGCTGTCGTTGAGGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: GLCPSALPADSLFQGGGSLIPMY*LSLRAG Trigger: CCCTGCCCTCAACGACAGCAAGTACATTGGGATGAG...ACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGCACAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | GTGATGGTGCTACAGAAGATGATGACCAGGGCCACGATGCAGAACTaGACGTTGGGCTGGTCACGTGTCAGGAAGGAGACGGCGGCCCCG | + |
Preference number: 5 (lower is better) Translates to: VMVLQKMMTRATMQN*TLGWSRVRKETAAP Trigger: CGGGGCCGCCGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCATCATCTTCTGTAGCACCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CCA 90 bp | ACAGGCGTGGTGGCGGCGAAGGAAAGCTGCACCAGGTTCCAGCCTTaGAGGGATTCCGCGATGATAGAGGTGACAGACGGACAGACGCCT | + |
Preference number: 5 (lower is better) Translates to: TGVVAAKESCTRFQP*RDSAMIEVTDGQTP Trigger: AGGCGTCTGTCCGTCTGTCACCTCTATCATCGCGGAATCCCTCCAAGGCTGGAACCTGGTGCAGCTTTCCTTCGCCGCCACCACGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | CCACGTGCACCTGTTCCCACCACGCAGGCTCGTACCAGCCCGGGATaGTCCACTGGTACTTGCTGCCAAACATGCTCTCCTCAAAGGCAC | + |
Preference number: 5 (lower is better) Translates to: PRAPVPTTQARTSPG*STGTCCQTCSPQRH Trigger: GTGCCTTTGAGGAGAGCATGTTTGGCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACGAGCCTGCGTGGTGGGAACAGGTGCACGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | AGATGGTCATGTGGGTGTTTTCGCAGTGTTCCAGCAGTGGGCGGATaGAGATGTCCCGTCCTGCTGGGTCCGGCTCCATGCTGTACCGCT | + |
Preference number: 5 (lower is better) Translates to: RWSCGCFRSVPAVGG*RCPVLLGPAPCCTA Trigger: AGCGGTACAGCATGGAGCCGGACCCAGCAGGACGGGACATCTCCATCCGCCCACTGCTGGAACACTGCGAAAACACCCACATGACCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | CAGAAGATGATGACCAGGGCCACGATGCAGAACTGCACGTTGGGCTaGTCACGTGTCAGGAAGGAGACGGCGGCCCCGATGATGCACATG | + |
Preference number: 5 (lower is better) Translates to: QKMMTRATMQNCTLG*SRVRKETAAPMMHM Trigger: CATGTGCATCATCGGGGCCGCCGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCATCATCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS-3UTR CAA 90 bp | AGACTGTCGGTTGCATCCTGCAGAGCACGTCTGCAGTGCGGTGCCCTGAATCCCATGCAGAACTGCACGTaGGGCTGGTCACGTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: RLSVASCRARLQCGALNPMQNCT*GWSRVR Trigger: CCTGACACGTGACCAGCCCAACGTGCAGTTCTGCAT...GGGATTCAGGGCACCGCACTGCAGACGTGCTCTGCAGGATGCAACCGACAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | TTGTCCAGCTCTGTGATCTTCATTCGTAGGCGGTGGTTTTCTGACTaGAGTCCCTCCAGGCGTGACGTGCTCGCCTGGTTCACGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: LSSSVIFIRRRWFSD*SPSRRDVLAWFTLV Trigger: CACCAGCGTGAACCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCGCCTACGAATGAAGATCACAGAGCTGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | CGGTGGTTTTCTGACTGCAGTCCCTCCAGGCGTGACGTGCTCGCCTaGTTCACGCTGGTGACTGAGGTGGAGGTCTTCGAATCTTCTTTC | + |
Preference number: 5 (lower is better) Translates to: RWFSDCSPSRRDVLA*FTLVTEVEVFESSF Trigger: GAAAGAAGATTCGAAGACCTCCACCTCAGTCACCAGCGTGAACCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GCCCGTCTGCCCTTCCTGCTGACTCCCTGTTCCAGGGAGGCGGAAGTGGGCTGGTCGGCCCATACTTTATaGCATCATAGAAGGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: ARLPFLLTPCSREAEVGWSAHTL*HHRRLS Trigger: TGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGA...CCAGCCCACTTCCGCCTCCCTGGAACAGGGAGTCAGCAGGAAGGGCAGACGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | ACTGCAGTCCCTCCAGGCGTGACGTGCTCGCCTGGTTCACGCTGGTaGCTGAGGTGGAGGTCTTCGAATCTTCTTTCTTCTGGTTCTGTG | + |
Preference number: 5 (lower is better) Translates to: TAVPPGVTCSPGSRW*LRWRSSNLLSSGSV Trigger: CACAGAACCAGAAGAAAGAAGATTCGAAGACCTCCACCTCAGTCACCAGCGTGAACCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | ACCTGTTCCCACCACGCAGGCTCGTACCAGCCCGGGATGATCCACTaGTACTTGCTGCCAAACATGCTCTCCTCAAAGGCACAACAGAAG | + |
Preference number: 5 (lower is better) Translates to: TCSHHAGSYQPGMIH*YLLPNMLSSKAQQK Trigger: CTTCTGTTGTGCCTTTGAGGAGAGCATGTTTGGCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACGAGCCTGCGTGGTGGGAACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGACAATCCAATACTTTCCCTTGGCCACCTCCTaGGTGAGCGGCATGAGGCCC | + |
Preference number: 5 (lower is better) Translates to: SESQGITDTRSPPTIQYFPLATS*VSGMRP Trigger: GGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGG...AAAGTATTGGATTGTCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGCGCAGGAGTGACTCGTaGCGGATCTGCTCGATGGCT | + |
Preference number: 5 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKRRSDS*RICSMA Trigger: AGCCATCGAGCAGATCCGCAACGAGTCACTCCTGCG...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | ACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCATTCAGGCTTTTAGCAAAGCACCAGGTTCCAGCCTaGGAGGGATTCCGCGATGAT | + |
Preference number: 5 (lower is better) Translates to: TTHLCRRPWTVPFRLLAKHQVPA*EGFRDD Trigger: ATCATCGCGGAATCCCTCCAAGGCTGGAACCTGGTG...CTTTGCTAAAAGCCTGAATGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAGCATACCCATGGAACTaGCTGGGCCCTACACCCGAA | + |
Preference number: 5 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPAYPWN*LGPTPE Trigger: TTCGGGTGTAGGGCCCAGCAAGTTCCATGGGTATGC...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | TCTTCCAAGTCTTTGTCCAGCTCTGTGATCTTCATTCGTAGGCGGTaGTTTTCTGACTGCAGTCCCTCCAGGCGTGACGTGCTCGCCTGG | + |
Preference number: 5 (lower is better) Translates to: SSKSLSSSVIFIRRR*FSDCSPSRRDVLAW Trigger: CCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCGCCTACGAATGAAGATCACAGAGCTGGACAAAGACTTGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GTGACTTGCCCAAGGTCACGGAGAGAGTCTGAGGGGACTGAGGACTCAAATCCAATGTACTTGCTGTCGTaGAGGGCAGGGATGCTCACG | + |
Preference number: 5 (lower is better) Translates to: VTCPRSRRESEGTEDSNPMYLLS*RAGMLT Trigger: CGTGAGCATCCCTGCCCTCAACGACAGCAAGTACAT...TGGATTTGAGTCCTCAGTCCCCTCAGACTCTCTCCGTGACCTTGGGCAAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | GAAGAGGAAGGCGCTGGCCATGATCATGCCGAGGATAGTGAGAGCTaGCAGGATGCTATACAGTGGAAGCGAGATCTTCCGAAGCTGCTC | + |
Preference number: 5 (lower is better) Translates to: EEEGAGHDHAEDSES*QDAIQWKRDLPKLL Trigger: GAGCAGCTTCGGAAGATCTCGCTTCCACTGTATAGCATCCTGTCAGCTCTCACTATCCTCGGCATGATCATGGCCAGCGCCTTCCTCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | AGAGCTGACAGGATGCTATACAGTGGAAGCGAGATCTTCCGAAGCTaGTCTAGAATGATGGTCTTGTCCTTGGGTGGCTCCGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: RADRMLYSGSEIFRS*SRMMVLSLGGSDPW Trigger: CCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCCACTGTATAGCATCCTGTCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAGTTTCGTTCATGGCGTaGAGGATGATTCTGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPVSFMA*RMILPR Trigger: CCTGGGCAGAATCATCCTCAACGCCATGAACGAAAC...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGATTTTGGTTCCGGTTCTaGATGTTGAAGAAGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRFWFRF*MLKKRK Trigger: CTTCCTCTTCTTCAACATCAAGAACCGGAACCAAAA...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | GGATGCTATACAGTGGAAGCGAGATCTTCCGAAGCTGCTCTAGAATaGTGGTCTTGTCCTTGGGTGGCTCCGACCCCTGGAACCTTATGG | + |
Preference number: 5 (lower is better) Translates to: GCYTVEARSSEAALE*WSCPWVAPTPGTLW Trigger: CCATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCCACTGTATAGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | ATGCTCTCCTCAAAGGCACAACAGAAGACTTTCGCTGCCATGTTCTaGTCAAACTGGCCAAGGATGATCCGCACGTCGTTCCCCTTGAGC | + |
Preference number: 5 (lower is better) Translates to: MLSSKAQQKTFAAMF*SNWPRMIRTSFPLS Trigger: GCTCAAGGGGAACGACGTGCGGATCATCCTTGGCCAGTTTGACCAGAACATGGCAGCGAAAGTCTTCTGTTGTGCCTTTGAGGAGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GGGCGGGCACCACCGATGACGTGTGTGCAGAGTGCAGAGGGCCATTTCTGCAGAAGCAGCTTCTGGTCTTaGATGATCTTCTTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: GRAPPMTCVQSAEGHFCRSSFWS*MIFFFI Trigger: AATGAAGAAGAAGATCATCAAAGACCAGAAGCTGCT...TCTGCAGAAATGGCCCTCTGCACTCTGCACACACGTCATCGGTGGTGCCCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | AATCCAGGTCTGACTCCCAGGCCGGTGCTCTTTGGGGTTCAATTTCAAGGGAAGTCCTCTATGGGGTCTTaGCATGTTCTTGAGGGCTCG | + |
Preference number: 5 (lower is better) Translates to: NPGLTPRPVLFGVQFQGKSSMGS*HVLEGS Trigger: CGAGCCCTCAAGAACATGCAAAGACCCCATAGAGGA...CTTCCCTTGAAATTGAACCCCAAAGAGCACCGGCCTGGGAGTCAGACCTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GCCTCTCTCCTTTGTCTAGAGTTTGATTTGTTTTTGCAAGTTTCTGACATCCCACGCCCGATGCTGCCCTaGGCCACCTCCTTGGTGAGC | + |
Preference number: 5 (lower is better) Translates to: ASLLCLEFDLFLQVSDIPRPMLP*ATSLVS Trigger: GCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGGCG...TGGGATGTCAGAAACTTGCAAAAACAAATCAAACTCTAGACAAAGGAGAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | CCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACAGACACACGCTCACATGTGCTCTGGGGAGTaGATGTCCTCTATGGGGTCT | + |
Preference number: 5 (lower is better) Translates to: PRRQSTVRSHKGLQTHAHMCSGE*MSSMGS Trigger: AGACCCCATAGAGGACATCAACTCCCCAGAGCACAT...GTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 90 bp | TCAAAGGCACAACAGAAGACTTTCGCTGCCATGTTCTGGTCAAACTaGCCAAGGATGATCCGCACGTCGTTCCCCTTGAGCTTTTTGACG | + |
Preference number: 5 (lower is better) Translates to: SKAQQKTFAAMFWSN*PRMIRTSFPLSFLT Trigger: CGTCAAAAAGCTCAAGGGGAACGACGTGCGGATCATCCTTGGCCAGTTTGACCAGAACATGGCAGCGAAAGTCTTCTGTTGTGCCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | CAACTCCTCTTTGTTTGCAGACGCCAAGGAGAAGTCATTGCCATTCCTCTCCCTTTCCCCTTGAGCTTTTaGACGCTGGTGCAGGGATCA | + |
Preference number: 5 (lower is better) Translates to: QLLFVCRRQGEVIAIPLPFPLSF*TLVQGS Trigger: TGATCCCTGCACCAGCGTCAAAAAGCTCAAGGGGAA...AGGGAGAGGAATGGCAATGACTTCTCCTTGGCGTCTGCAAACAAAGAGGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | CCTAGAAGACAGAGCACAGTTCGGAGTCACAAGGGATTACAGACACACGCTCACGTGACTCCGAAGAAGTaGGTTTCGTTCATGGCGTTG | + |
Preference number: 5 (lower is better) Translates to: PRRQSTVRSHKGLQTHAHVTPKK*VSFMAL Trigger: CAACGCCATGAACGAAACCAACTTCTTCGGAGTCAC...GTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGAACTGTGCTCTGTCTTCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAAACCTTATGGTGTCGTaGATGATCTCCAGTGTGTCA | + |
Preference number: 5 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPNLMVS*MISSVS Trigger: TGACACACTGGAGATCATCAACGACACCATAAGGTT...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGATGATGGTCTTGTCCTaGGGTGGCTCCGACCCCTGG | + |
Preference number: 5 (lower is better) Translates to: IDTMQWGKRNASFLHLILMMVLS*GGSDPW Trigger: CCAGGGGTCGGAGCCACCCAAGGACAAGACCATCAT...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCTTTAGGGAGTAAGCAAACCACGCATTTGTGCAGACGCCCCTGGACGGTGCCAACTTCTTCCAAGTCTTaGTCCAGCTCTGTGATCTTC | + |
Preference number: 5 (lower is better) Translates to: SLGSKQTTHLCRRPWTVPTSSKS*SSSVIF Trigger: GAAGATCACAGAGCTGGACAAAGACTTGGAAGAAGT...TGGCACCGTCCAGGGGCGTCTGCACAAATGCGTGGTTTGCTTACTCCCTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | CTGGGCCCTACACCCGAACGCTTGCTGTTGTATTCTCTTTCGTATTaGTGTGGAGTCTTCCCTGAGATGGTCTTGATTTGTTTGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: LGPTPERLLLYSLSY*CGVFPEMVLICLEL Trigger: GAGCTCCAAACAAATCAAGACCATCTCAGGGAAGACTCCACAGCAATACGAAAGAGAATACAACAGCAAGCGTTCGGGTGTAGGGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATCTGGTGCAGGGATCATaGGAGAAGCTCTCCGTGTCT | + |
Preference number: 5 (lower is better) Translates to: VTNTSQVRAASQWKAILDLVQGS*EKLSVS Trigger: AGACACGGAGAGCTTCTCCAATGATCCCTGCACCAG...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCTGGGAGTAGACATTCCATGATTAGCTCGGATGGTTCCCCTTATTACCAGGAAGGTCTTTGCATGTTCTaGAGGGCTCGGTCGTGTTCC | + |
Preference number: 5 (lower is better) Translates to: SGSRHSMISSDGSPYYQEGLCMF*RARSCS Trigger: GGAACACGACCGAGCCCTCAAGAACATGCAAAGACC...TTCCTGGTAATAAGGGGAACCATCCGAGCTAATCATGGAATGTCTACTCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 90 bp | GAGAATCCAGGTCCGGACCGTGCAGAGTGTTTCAAAGGTCTTTTCTaGGACGAAGGATCCATCGAGACCAAAGAGGAAGATGGATGCATA | + |
Preference number: 5 (lower is better) Translates to: ENPGPDRAECFKGLF*DEGSIETKEEDGCI Trigger: TATGCATCCATCTTCCTCTTTGGTCTCGATGGATCCTTCGTCTCAGAAAAGACCTTTGAAACACTCTGCACGGTCCGGACCTGGATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | GTTCGGCCCATACTTTATTGCATCATAGAAGGCTTTCAGTCCCTTTaGATTGTCACACTCGGTGTCGTAGAGTCGCAGGTCCAGGAAGTA | + |
Preference number: 5 (lower is better) Translates to: VRPILYCIIEGFQSL*IVTLGVVESQVQEV Trigger: TACTTCCTGGACCTGCGACTCTACGACACCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | CTTCATTTTCACATTTTTGAAGATGGCATGGACCCTCCAGGTCTTTaGAAACATGGCTCCAAAGGCGGTTGTGTAGCCCACGGTGAGAAT | + |
Preference number: 5 (lower is better) Translates to: LHFHIFEDGMDPPGL*KHGSKGGCVAHGEN Trigger: ATTCTCACCGTGGGCTACACAACCGCCTTTGGAGCCATGTTTGCAAAGACCTGGAGGGTCCATGCCATCTTCAAAAATGTGAAAATGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS-3UTR CAA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATATGGTCTTGATTTGTTaGGAGCTCAGGGGCTCGAAG | + |
Preference number: 5 (lower is better) Translates to: VTNTSQVRAASQWKAILDMVLIC*ELRGSK Trigger: CTTCGAGCCCCTGAGCTCCAAACAAATCAAGACCAT...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | TCGGAGTCACAAGGGATTACAGACACACGCTCACCTCCGACAATCCAATACTTTTTCCCTGAGATGGTCTaGATTTGTTTGGAGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: SESQGITDTRSPPTIQYFFPEMV*ICLELR Trigger: CCTGAGCTCCAAACAAATCAAGACCATCTCAGGGAA...AAAGTATTGGATTGTCGGAGGTGAGCGTGTGTCTGTAATCCCTTGTGACTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | GTTACTAATACCTCACAGGTCAGAGCTGCTTCACAGTGGAAAGCTATCCTGGATTTCCGGTTCTTGATGTaGAAGAAGAGGAAGGCGCTG | + |
Preference number: 5 (lower is better) Translates to: VTNTSQVRAASQWKAILDFRFLM*KKRKAL Trigger: CAGCGCCTTCCTCTTCTTCAACATCAAGAACCGGAA...ATCCAGGATAGCTTTCCACTGTGAAGCAGCTCTGACCTGTGAGGTATTAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 90 bp | ACAGACGCCTCCAAACACCATCAAATGGTTCGGCCCATACTTTATTaGATCATAGAAGGCTTTCAGTCCCTTTGCATTGTCACACTCGGT | + |
Preference number: 5 (lower is better) Translates to: TDASKHHQMVRPILY*IIEGFQSLCIVTLG Trigger: ACCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAACCATTTGATGGTGTTTGGAGGCGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS-3UTR CAA 90 bp | ATCGATACCATGCAGTGGGGCAAGAGAAACGCCTCATTTTTACACTTGATTCTGCACATGATCCCCACATaGTACACACTCATCCCAATG | + |
Preference number: 5 (lower is better) Translates to: IDTMQWGKRNASFLHLILHMIPT*YTLIPM Trigger: CATTGGGATGAGTGTGTACAATGTGGGGATCATGTG...CAGAATCAAGTGTAAAAATGAGGCGTTTCTCTTGCCCCACTGCATGGTATCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | ACGGCGGGGAGCACGCCGCGCCCGATGCTGCCCTTGGCCACCTCCTaGGTGAGCGGCATGAGGCCCATGATGGAGAGCGGCGGGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: TAGSTPRPMLPLATS*VSGMRPMMESGGLL Trigger: CAGCAGCCCGCCGCTCTCCATCATGGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGGCGCGGCGTGCTCCCCGCCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | TCCACGGCGGGGAGCACGCCGCGCCCGATGCTGCCCTaGGCCACCTCCTTGGTGAGCGGCATGAGGCCCATG | + |
Preference number: 6 (lower is better) Translates to: STAGSTPRPMLP*ATSLVSGMRPM Trigger: CATGGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGGCGCGGCGTGCTCCCCGCCGTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | AGGGGCGCAGGAGTGACTCGTTGCGGATCTGCTCGATaGCTAGCTCCACGGCGGGGAGCACGCCGCGCCCGA | + |
Preference number: 6 (lower is better) Translates to: RGAGVTRCGSAR*LAPRRGARRAR Trigger: TCGGGCGCGGCGTGCTCCCCGCCGTGGAGCTAGCCATCGAGCAGATCCGCAACGAGTCACTCCTGCGCCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | ATGGCTAGCTCCACGGCGGGGAGCACGCCGCGCCCGATGCTGCCCTaGGCCACCTCCTTGGTGAGCGGCATGAGGCCCATGATGGAGAGC | + |
Preference number: 6 (lower is better) Translates to: MASSTAGSTPRPMLP*ATSLVSGMRPMMES Trigger: GCTCTCCATCATGGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGGCGCGGCGTGCTCCCCGCCGTGGAGCTAGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | AGCACGCCGCGCCCGATGCTGCCCTTGGCCACCTCCTaGGTGAGCGGCATGAGGCCCATGATGGAGAGCGGC | + |
Preference number: 6 (lower is better) Translates to: STPRPMLPLATS*VSGMRPMMESG Trigger: GCCGCTCTCCATCATGGGCCTCATGCCGCTCACCAAGGAGGTGGCCAAGGGCAGCATCGGGCGCGGCGTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | GCAGCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTaGGCCTCCACGTGCACCTGTTCCCACCACGCAGGC | + |
Preference number: 6 (lower is better) Translates to: AARRLLRRQREE*ASTCTCSHHAG Trigger: GCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | AGGTCGTTCCTCACCTCGGAGAAGCGCTGCACGTCCTaGGTGAGTGTGCCCACGCGCCGCCAGCGGAAGTGC | + |
Preference number: 6 (lower is better) Translates to: RSFLTSEKRCTS*VSVPTRRQRKC Trigger: GCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCGCTTCTCCGAGGTGAGGAACGACCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | ACCCCAGTCAGGTCGTTCCTCACCTCGGAGAAGCGCTaGACGTCCTGCGTGAGTGTGCCCACGCGCCGCCAG | + |
Preference number: 6 (lower is better) Translates to: TPVRSFLTSEKR*TSCVSVPTRRQ Trigger: CTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCGCTTCTCCGAGGTGAGGAACGACCTGACTGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | CAGCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTTaGCCTCCACGTGCACCTGTTCCCACCACGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: QPGGSCAGSVRS*PPRAPVPTTQA Trigger: AGCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | CCTTCCATGGCAGCCAGGAGGCTCCTGCGCAGGCAGCGTGAGGAGTaGGCCTCCACGTGCACCTGTTCCCACCACGCAGGCTCGTACCAG | + |
Preference number: 6 (lower is better) Translates to: PSMAARRLLRRQREE*ASTCTCSHHAGSYQ Trigger: CTGGTACGAGCCTGCGTGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | CGTTCCTCACCTCGGAGAAGCGCTGCACGTCCTGCGTaGGTGTGCCCACGCGCCGCCAGCGGAAGTGCTTCA | + |
Preference number: 6 (lower is better) Translates to: RSSPRRSAARPA*VCPRAASGSAS Trigger: TGAAGCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGACGTGCAGCGCTTCTCCGAGGTGAGGAACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | TCCTGCGTGAGTGTGCCCACGCGCCGCCAGCGGAAGTaGTTCAGCAGCTTCAGGATTGCCGGGTTCACCGCG | + |
Preference number: 6 (lower is better) Translates to: SCVSVPTRRQRK*FSSFRIAGFTA Trigger: CGCGGTGAACCCGGCAATCCTGAAGCTGCTGAAGCACTTCCGCTGGCGGCGCGTGGGCACACTCACGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | TTCCATGGCAGCCAGGAGGCTCCTGCGCAGGCAGCGTaGGGAGTTGGCCTCCACGTGCACCTGTTCCCACCA | + |
Preference number: 6 (lower is better) Translates to: FHGSQEAPAQAA*GVGLHVHLFPP Trigger: TGGTGGGAACAGGTGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | CTCCGATGTAGCCTTCCATGGCAGCCAGGAGGCTCCTaGGCAGGCAGCGTGAGGAGTTGGCCTCCACGTGCA | + |
Preference number: 6 (lower is better) Translates to: LRCSLPWQPGGS*AGSVRSWPPRA Trigger: TGCACGTGGAGGCCAACTCCTCACGCTGCCTGCGCAGGAGCCTCCTGGCTGCCATGGAAGGCTACATCGGAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | GTGTTCCAGCAGTGGGCGGATGGAGATGTCCCGTCCTaGTGGGTCCGGCTCCATGCTGTACCGCTCCACTGT | + |
Preference number: 6 (lower is better) Translates to: VFQQWADGDVPS*WVRLHAVPLHC Trigger: ACAGTGGAGCGGTACAGCATGGAGCCGGACCCAGCAGGACGGGACATCTCCATCCGCCCACTGCTGGAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | ATGACCAGGGCCACGATGCAGAACTGCACGTTGGGCTaGTCACGTGTCAGGAAGGAGACGGCGGCCCCGATG | + |
Preference number: 6 (lower is better) Translates to: MTRATMQNCTLG*SRVRKETAAPM Trigger: CATCGGGGCCGCCGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CCA 72 bp | GAGACCATGACTCGGAAGGAGGGTGGTACGTGTCTGTaGCGAGGGCTGGCTGTAGGGCTGACACAGGGGCTG | + |
Preference number: 6 (lower is better) Translates to: ETMTRKEGGTCL*RGLAVGLTQGL Trigger: CAGCCCCTGTGTCAGCCCTACAGCCAGCCCTCGCCACAGACACGTACCACCCTCCTTCCGAGTCATGGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | GTGTGCCCACGCGCCGCCAGCGGAAGTGCTTCAGCAGCTTCAGGATaGCCGGGTTCACCGCGTTGTCTGAGGGCACCGTCCGGAAGAAAT | + |
Preference number: 6 (lower is better) Translates to: VCPRAASGSASAASG*PGSPRCLRAPSGRN Trigger: ATTTCTTCCGGACGGTGCCCTCAGACAACGCGGTGAACCCGGCAATCCTGAAGCTGCTGAAGCACTTCCGCTGGCGGCGCGTGGGCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | TACCGCTCCACTGTCCTCCGCAGGGGGTCCACAGCCTaGCAGCAGATCAGGATGCACAGATCGATCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: YRSTVLRRGSTA*QQIRMHRSISS Trigger: GCTGCTGATCGATCTGTGCATCCTGATCTGCTGGCAGGCTGTGGACCCCCTGCGGAGGACAGTGGAGCGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CCA 72 bp | TGTGGGTGTTTTCGCAGTGTTCCAGCAGTGGGCGGATaGAGATGTCCCGTCCTGCTGGGTCCGGCTCCATGC | + |
Preference number: 6 (lower is better) Translates to: CGCFRSVPAVGG*RCPVLLGPAPC Trigger: GCATGGAGCCGGACCCAGCAGGACGGGACATCTCCATCCGCCCACTGCTGGAACACTGCGAAAACACCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | AACAGGCGTGGTGGCGGCGAAGGAAAGCTGCACCAGGTTCCAGCCTaGGAGGGATTCCGCGATGATAGAGGTGACAGACGGACAGACGCC | + |
Preference number: 6 (lower is better) Translates to: NRRGGGEGKLHQVPA*EGFRDDRGDRRTDA Trigger: GGCGTCTGTCCGTCTGTCACCTCTATCATCGCGGAATCCCTCCAAGGCTGGAACCTGGTGCAGCTTTCCTTCGCCGCCACCACGCCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | GATGGTCATGTGGGTGTTTTCGCAGTGTTCCAGCAGTaGGCGGATGGAGATGTCCCGTCCTGCTGGGTCCGG | + |
Preference number: 6 (lower is better) Translates to: DGHVGVFAVFQQ*ADGDVPSCWVR Trigger: CCGGACCCAGCAGGACGGGACATCTCCATCCGCCCACTGCTGGAACACTGCGAAAACACCCACATGACCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | TCTGACTGCAGTCCCTCCAGGCGTGACGTGCTCGCCTaGTTCACGCTGGTGACTGAGGTGGAGGTCTTCGAA | + |
Preference number: 6 (lower is better) Translates to: SDCSPSRRDVLA*FTLVTEVEVFE Trigger: TTCGAAGACCTCCACCTCAGTCACCAGCGTGAACCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | AAGATGATGACCAGGGCCACGATGCAGAACTGCACGTaGGGCTGGTCACGTGTCAGGAAGGAGACGGCGGCC | + |
Preference number: 6 (lower is better) Translates to: KMMTRATMQNCT*GWSRVRKETAA Trigger: GGCCGCCGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCATCATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 90 bp | GTGCTACAGAAGATGATGACCAGGGCCACGATGCAGAACTGCACGTaGGGCTGGTCACGTGTCAGGAAGGAGACGGCGGCCCCGATGATG | + |
Preference number: 6 (lower is better) Translates to: VLQKMMTRATMQNCT*GWSRVRKETAAPMM Trigger: CATCATCGGGGCCGCCGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCATCATCTTCTGTAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS TCA 72 bp | CCTGTTCCCACCACGCAGGCTCGTACCAGCCCGGGATaGTCCACTGGTACTTGCTGCCAAACATGCTCTCCT | + |
Preference number: 6 (lower is better) Translates to: PVPTTQARTSPG*STGTCCQTCSP Trigger: AGGAGAGCATGTTTGGCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACGAGCCTGCGTGGTGGGAACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | GTCTTGTCCTTGGGTGGCTCCGACCCCTGGAACCTTATGGTGTCGTaGATGATCTCCAGTGTGTCAGCCACAGCGTTGTACTCGCCGACC | + |
Preference number: 6 (lower is better) Translates to: VLSLGGSDPWNLMVS*MISSVSATALYSPT Trigger: GGTCGGCGAGTACAACGCTGTGGCTGACACACTGGAGATCATCAACGACACCATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | GTCAGGAAGGAGACGGCGGCCCCGATGATGCACATGATCCCCACATaGTACACACTCATCCCAATGTACTTGCTGTCGTTGAGGGCAGGG | + |
Preference number: 6 (lower is better) Translates to: VRKETAAPMMHMIPT*YTLIPMYLLSLRAG Trigger: CCCTGCCCTCAACGACAGCAAGTACATTGGGATGAGTGTGTACAATGTGGGGATCATGTGCATCATCGGGGCCGCCGTCTCCTTCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS TCA 72 bp | CCTCCAGGCGTGACGTGCTCGCCTGGTTCACGCTGGTaGCTGAGGTGGAGGTCTTCGAATCTTCTTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: PPGVTCSPGSRW*LRWRSSNLLSS Trigger: AGAAGAAAGAAGATTCGAAGACCTCCACCTCAGTCACCAGCGTGAACCAGGCGAGCACGTCACGCCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | CTACAGAAGATGATGACCAGGGCCACGATGCAGAACTaGACGTTGGGCTGGTCACGTGTCAGGAAGGAGACG | + |
Preference number: 6 (lower is better) Translates to: LQKMMTRATMQN*TLGWSRVRKET Trigger: CGTCTCCTTCCTGACACGTGACCAGCCCAACGTGCAGTTCTGCATCGTGGCCCTGGTCATCATCTTCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS GCA 72 bp | TCTGTGATCTTCATTCGTAGGCGGTGGTTTTCTGACTaGAGTCCCTCCAGGCGTGACGTGCTCGCCTGGTTC | + |
Preference number: 6 (lower is better) Translates to: SVIFIRRRWFSD*SPSRRDVLAWF Trigger: GAACCAGGCGAGCACGTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCGCCTACGAATGAAGATCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | GGAGCCCCTTGTAGGCGTAGACAATGCCGAGCCAGATaGTCATGTGGGTGTTTTCGCAGTGTTCCAGCAGTG | + |
Preference number: 6 (lower is better) Translates to: GAPCRRRQCRAR*SCGCFRSVPAV Trigger: CACTGCTGGAACACTGCGAAAACACCCACATGACCATCTGGCTCGGCATTGTCTACGCCTACAAGGGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | GCAGGCTCGTACCAGCCCGGGATGATCCACTGGTACTaGCTGCCAAACATGCTCTCCTCAAAGGCACAACAG | + |
Preference number: 6 (lower is better) Translates to: AGSYQPGMIHWY*LPNMLSSKAQQ Trigger: CTGTTGTGCCTTTGAGGAGAGCATGTTTGGCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACGAGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | TGGAGGGACAGCCGGCGCTGGATGTGCTCTGGGGAGTaGATGTCCTCTATGGGGTCTTTGCATGTTCTTGAG | + |
Preference number: 6 (lower is better) Translates to: WRDSRRWMCSGE*MSSMGSLHVLE Trigger: CTCAAGAACATGCAAAGACCCCATAGAGGACATCAACTCCCCAGAGCACATCCAGCGCCGGCTGTCCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | TCCCACCACGCAGGCTCGTACCAGCCCGGGATGATCCACTGGTACTaGCTGCCAAACATGCTCTCCTCAAAGGCACAACAGAAGACTTTC | + |
Preference number: 6 (lower is better) Translates to: SHHAGSYQPGMIHWY*LPNMLSSKAQQKTF Trigger: GAAAGTCTTCTGTTGTGCCTTTGAGGAGAGCATGTTTGGCAGCAAGTACCAGTGGATCATCCCGGGCTGGTACGAGCCTGCGTGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | ACAGTGGAAGCGAGATCTTCCGAAGCTGCTCTAGAATaGTGGTCTTGTCCTTGGGTGGCTCCGACCCCTGGA | + |
Preference number: 6 (lower is better) Translates to: TVEARSSEAALE*WSCPWVAPTPG Trigger: TCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | GGCGCTGGCCATGATCATGCCGAGGATAGTGAGAGCTaGCAGGATGCTATACAGTGGAAGCGAGATCTTCCG | + |
Preference number: 6 (lower is better) Translates to: GAGHDHAEDSES*QDAIQWKRDLP Trigger: CGGAAGATCTCGCTTCCACTGTATAGCATCCTGTCAGCTCTCACTATCCTCGGCATGATCATGGCCAGCGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | CAAACATGGCTCCAAAGGCGGTTGTGTAGCCCACGGTaGGAATCCAGGTCCGGACCGTGCAGAGTGTTTCAA | + |
Preference number: 6 (lower is better) Translates to: QTWLQRRLCSPR*ESRSGPCRVFQ Trigger: TTGAAACACTCTGCACGGTCCGGACCTGGATTCTCACCGTGGGCTACACAACCGCCTTTGGAGCCATGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | ATGGGTACTTCTTCTTATCCGCAAGAACAGGCGTGGTaGCGGCGAAGGAAAGCTGCACCAGGTTCCAGCCTT | + |
Preference number: 6 (lower is better) Translates to: MGTSSYPQEQAW*RRRKAAPGSSL Trigger: AAGGCTGGAACCTGGTGCAGCTTTCCTTCGCCGCCACCACGCCTGTTCTTGCGGATAAGAAGAAGTACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | CCCAGATGCCATCGTAGGCATACCCATGGAACTTGCTaGGCCCTACACCCGAACGCTTGCTGTTGTATTCTC | + |
Preference number: 6 (lower is better) Translates to: PRCHRRHTHGTC*ALHPNACCCIL Trigger: GAGAATACAACAGCAAGCGTTCGGGTGTAGGGCCCAGCAAGTTCCATGGGTATGCCTACGATGGCATCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | TTGGGTGGCTCCGACCCCTGGAACCTTATGGTGTCGTaGATGATCTCCAGTGTGTCAGCCACAGCGTTGTAC | + |
Preference number: 6 (lower is better) Translates to: LGGSDPWNLMVS*MISSVSATALY Trigger: GTACAACGCTGTGGCTGACACACTGGAGATCATCAACGACACCATAAGGTTCCAGGGGTCGGAGCCACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | GCTGGTGCAGGGATCATTGGAGAAGCTCTCCGTGTCTaGGATCTCAATGTCTTCCCCGTACAGAACCCCAGT | + |
Preference number: 6 (lower is better) Translates to: AGAGIIGEALRV*DLNVFPVQNPS Trigger: ACTGGGGTTCTGTACGGGGAAGACATTGAGATCTCAGACACGGAGAGCTTCTCCAATGATCCCTGCACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | GGAGTTGATGTCCTCTATGGGGTCTTTGCATGTTCTTaGGGGCTCGGTCGTGTTCCACTGGAGCTGAGGGTT | + |
Preference number: 6 (lower is better) Translates to: GVDVLYGVFACS*GLGRVPLELRV Trigger: AACCCTCAGCTCCAGTGGAACACGACCGAGCCCTCAAGAACATGCAAAGACCCCATAGAGGACATCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | AATATGGGTACTTCTTCTTATCCGCAAGAACAGGCGTaGTGGCGGCGAAGGAAAGCTGCACCAGGTTCCAGC | + |
Preference number: 6 (lower is better) Translates to: NMGTSSYPQEQA*WRRRKAAPGSS Trigger: GCTGGAACCTGGTGCAGCTTTCCTTCGCCGCCACCACGCCTGTTCTTGCGGATAAGAAGAAGTACCCATATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | CAACAGAAGACTTTCGCTGCCATGTTCTGGTCAAACTaGCCAAGGATGATCCGCACGTCGTTCCCCTTGAGC | + |
Preference number: 6 (lower is better) Translates to: QQKTFAAMFWSN*PRMIRTSFPLS Trigger: GCTCAAGGGGAACGACGTGCGGATCATCCTTGGCCAGTTTGACCAGAACATGGCAGCGAAAGTCTTCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | TCTTTGTCCAGCTCTGTGATCTTCATTCGTAGGCGGTaGTTTTCTGACTGCAGTCCCTCCAGGCGTGACGTG | + |
Preference number: 6 (lower is better) Translates to: SLSSSVIFIRRR*FSDCSPSRRDV Trigger: CACGTCACGCCTGGAGGGACTGCAGTCAGAAAACCACCGCCTACGAATGAAGATCACAGAGCTGGACAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | ATCTTCCGAAGCTGCTCTAGAATGATGGTCTTGTCCTaGGGTGGCTCCGACCCCTGGAACCTTATGGTGTCG | + |
Preference number: 6 (lower is better) Translates to: IFRSCSRMMVLS*GGSDPWNLMVS Trigger: CGACACCATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | AGCGAGATCTTCCGAAGCTGCTCTAGAATGATGGTCTaGTCCTTGGGTGGCTCCGACCCCTGGAACCTTATG | + |
Preference number: 6 (lower is better) Translates to: SEIFRSCSRMMV*SLGGSDPWNLM Trigger: CATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | GAGACGGCGGCCCCGATGATGCACATGATCCCCACATaGTACACACTCATCCCAATGTACTTGCTGTCGTTG | + |
Preference number: 6 (lower is better) Translates to: ETAAPMMHMIPT*YTLIPMYLLSL Trigger: CAACGACAGCAAGTACATTGGGATGAGTGTGTACAATGTGGGGATCATGTGCATCATCGGGGCCGCCGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 72 bp | ATGTGCTCTGGGGAGTTGATGTCCTCTATGGGGTCTTaGCATGTTCTTGAGGGCTCGGTCGTGTTCCACTGG | + |
Preference number: 6 (lower is better) Translates to: MCSGELMSSMGS*HVLEGSVVFHW Trigger: CCAGTGGAACACGACCGAGCCCTCAAGAACATGCAAAGACCCCATAGAGGACATCAACTCCCCAGAGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | GGAAGCGAGATCTTCCGAAGCTGCTCTAGAATGATGGTCTTGTCCTaGGGTGGCTCCGACCCCTGGAACCTTATGGTGTCGTTGATGATC | + |
Preference number: 6 (lower is better) Translates to: GSEIFRSCSRMMVLS*GGSDPWNLMVSLMI Trigger: GATCATCAACGACACCATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | TACAGTGGAAGCGAGATCTTCCGAAGCTGCTCTAGAATGATGGTCTaGTCCTTGGGTGGCTCCGACCCCTGGAACCTTATGGTGTCGTTG | + |
Preference number: 6 (lower is better) Translates to: YSGSEIFRSCSRMMV*SLGGSDPWNLMVSL Trigger: CAACGACACCATAAGGTTCCAGGGGTCGGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCCACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | CATTGTACACACTCATCCCAATGTACTTGCTGTCGTTaGGGGCAGGGATGCTCACGTTGCGGGTTTCCCATG | + |
Preference number: 6 (lower is better) Translates to: HCTHSSQCTCCR*GQGCSRCGFPM Trigger: CATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACATTGGGATGAGTGTGTACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 90 bp | CTCATCCCAATGTACTTGCTGTCGTTGAGGGCAGGGATGCTCACGTaGCGGGTTTCCCATGCTAAGAAACAACCGAACAACATGAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LIPMYLLSLRAGMLT*RVSHAKKQPNNMRS Trigger: GCTCCTCATGTTGTTCGGTTGTTTCTTAGCATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACATTGGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | CTCATCCCAATGTACTTGCTGTCGTTGAGGGCAGGGATGCTCACGTaGCGGGTTTCCCATGCTAAGAAACAACCGAACAACTCCATGCTG | + |
Preference number: 6 (lower is better) Translates to: LIPMYLLSLRAGMLT*RVSHAKKQPNNSML Trigger: CAGCATGGAGTTGTTCGGTTGTTTCTTAGCATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACATTGGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205643.2 |
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CDS TCA 72 bp | TTCTTCTGGTTCTGTGTGAACTGGAATCGCCTGTTCTaGGTGGCTGCGTCAGGGTTTGTCCTCAGAGTGATG | + |
Preference number: 6 (lower is better) Translates to: FFWFCVNWNRLF*VAASGFVLRVM Trigger: CATCACTCTGAGGACAAACCCTGACGCAGCCACTCAGAACAGGCGATTCCAGTTCACACAGAACCAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS GCA 72 bp | AGGATGCTATACAGTGGAAGCGAGATCTTCCGAAGCTaGTCTAGAATGATGGTCTTGTCCTTGGGTGGCTCC | + |
Preference number: 6 (lower is better) Translates to: RMLYSGSEIFRS*SRMMVLSLGGS Trigger: GGAGCCACCCAAGGACAAGACCATCATTCTAGAGCAGCTTCGGAAGATCTCGCTTCCACTGTATAGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CCA 72 bp | TCAAAGGCACAACAGAAGACTTTCGCTGCCATGTTCTaGTCAAACTGGCCAAGGATGATCCGCACGTCGTTC | + |
Preference number: 6 (lower is better) Translates to: SKAQQKTFAAMF*SNWPRMIRTSF Trigger: GAACGACGTGCGGATCATCCTTGGCCAGTTTGACCAGAACATGGCAGCGAAAGTCTTCTGTTGTGCCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | TACCCATGGAACTTGCTGGGCCCTACACCCGAACGCTaGCTGTTGTATTCTCTTTCGTATTGCTGTGGAGTC | + |
Preference number: 6 (lower is better) Translates to: YPWNLLGPTPER*LLYSLSYCCGV Trigger: GACTCCACAGCAATACGAAAGAGAATACAACAGCAAGCGTTCGGGTGTAGGGCCCAGCAAGTTCCATGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | ATGTACTTGCTGTCGTTGAGGGCAGGGATGCTCACGTaGCGGGTTTCCCATGCTAAGAAACAACCGAACAAC | + |
Preference number: 6 (lower is better) Translates to: MYLLSLRAGMLT*RVSHAKKQPNN Trigger: GTTGTTCGGTTGTTTCTTAGCATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 72 bp | ACATTGTACACACTCATCCCAATGTACTTGCTGTCGTaGAGGGCAGGGATGCTCACGTTGCGGGTTTCCCAT | + |
Preference number: 6 (lower is better) Translates to: TLYTLIPMYLLS*RAGMLTLRVSH Trigger: ATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACATTGGGATGAGTGTGTACAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 90 bp | GGTTCGGCCCATACTTTATTGCATCATAGAAGGCTTTCAGTCCCTTaGCATTGTCACACTCGGTGTCGTAGAGTCGCAGGTCCAGGAAGT | + |
Preference number: 6 (lower is better) Translates to: GSAHTLLHHRRLSVP*HCHTRCRRVAGPGS Trigger: ACTTCCTGGACCTGCGACTCTACGACACCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | ATGATCCCCACATTGTACACACTCATCCCAATGTACTTGCTGTCGTaGAGGGCAGGGATGCTCACGTTGCGGGTTTCCCATGCTAAGAAA | + |
Preference number: 6 (lower is better) Translates to: MIPTLYTLIPMYLLS*RAGMLTLRVSHAKK Trigger: TTTCTTAGCATGGGAAACCCGCAACGTGAGCATCCCTGCCCTCAACGACAGCAAGTACATTGGGATGAGTGTGTACAATGTGGGGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS TCA 72 bp | TTTCGTATTGCTGTGGAGTCTTCCCTGAGATGGTCTTaGTTTGTTTGGAGCTCAGGGGCTCGAAGTCCACTC | + |
Preference number: 6 (lower is better) Translates to: FRIAVESSLRWS*FVWSSGARSPL Trigger: GAGTGGACTTCGAGCCCCTGAGCTCCAAACAAATCAAGACCATCTCAGGGAAGACTCCACAGCAATACGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | ATGGTTCCCATTCTTTCCCCGTTCCGGAACACAACTTaGCCCGTGACTCCGAAGAAGTTGGTTTCGTTCATG | + |
Preference number: 6 (lower is better) Translates to: MVPILSPFRNTT*PVTPKKLVSFM Trigger: CATGAACGAAACCAACTTCTTCGGAGTCACGGGTCAAGTTGTGTTCCGGAACGGGGAAAGAATGGGAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | GGTCCGGACCGTGCAGAGTGTTTCAAAGGTCTTTTCTaGGACGAAGGATCCATCGAGACCAAAGAGGAAGAT | + |
Preference number: 6 (lower is better) Translates to: GPDRAECFKGLF*DEGSIETKEED Trigger: ATCTTCCTCTTTGGTCTCGATGGATCCTTCGTCTCAGAAAAGACCTTTGAAACACTCTGCACGGTCCGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | TGGAGGTCTTCGAATCTTCTTTCTTCTGGTTCTGTGTaGACTGGAATCGCCTGTTCTGAGTGGCTGCGTCAG | + |
Preference number: 6 (lower is better) Translates to: WRSSNLLSSGSV*TGIACSEWLRQ Trigger: CTGACGCAGCCACTCAGAACAGGCGATTCCAGTTCACACAGAACCAGAAGAAAGAAGATTCGAAGACCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107749.4 ENSMUST00000205643.2 |
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CDS CAA 72 bp | TTCCCCTTGAGCTTTTTGACGCTGGTGCAGGGATCATaGGAGAAGCTCTCCGTGTCTGAGATCTCAATGTCT | + |
Preference number: 6 (lower is better) Translates to: FPLSFLTLVQGS*EKLSVSEISMS Trigger: AGACATTGAGATCTCAGACACGGAGAGCTTCTCCAATGATCCCTGCACCAGCGTCAAAAAGCTCAAGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | CTTTCGTATTGCTGTGGAGTCTTCCCTGAGATGGTCTaGATTTGTTTGGAGCTCAGGGGCTCGAAGTCCACT | + |
Preference number: 6 (lower is better) Translates to: LSYCCGVFPEMV*ICLELRGSKST Trigger: AGTGGACTTCGAGCCCCTGAGCTCCAAACAAATCAAGACCATCTCAGGGAAGACTCCACAGCAATACGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | GGGCTTGACATCTTGATCAGCTTTTGGTTCCGGTTCTaGATGTTGAAGAAGAGGAAGGCGCTGGCCATGATC | + |
Preference number: 6 (lower is better) Translates to: GLDILISFWFRF*MLKKRKALAMI Trigger: GATCATGGCCAGCGCCTTCCTCTTCTTCAACATCAAGAACCGGAACCAAAAGCTGATCAAGATGTCAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | AATGGTTCCCATTCTTTCCCCGTTCCGGAACACAACTaGACCCGTGACTCCGAAGAAGTTGGTTTCGTTCAT | + |
Preference number: 6 (lower is better) Translates to: NGSHSFPVPEHN*TRDSEEVGFVH Trigger: ATGAACGAAACCAACTTCTTCGGAGTCACGGGTCAAGTTGTGTTCCGGAACGGGGAAAGAATGGGAACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | GACAGACGCCTCCAAACACCATCAAATGGTTCGGCCCATACTTTATaGCATCATAGAAGGCTTTCAGTCCCTTTGCATTGTCACACTCGG | + |
Preference number: 6 (lower is better) Translates to: DRRLQTPSNGSAHTL*HHRRLSVPLHCHTR Trigger: CCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAACCATTTGATGGTGTTTGGAGGCGTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 90 bp | TGTGCTCTCTGTGAAGTTGCCCAAGCTGAGGATGTCGTTGAGCTCTaGGTAGTGATTCTGTTTGATGTATGTGGTCTTCTCTGGTGTGTC | + |
Preference number: 6 (lower is better) Translates to: CALCEVAQAEDVVEL*VVILFDVCGLLWCV Trigger: GACACACCAGAGAAGACCACATACATCAAACAGAATCACTACCAAGAGCTCAACGACATCCTCAGCTTGGGCAACTTCACAGAGAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS TCA 72 bp | CCCACCCAGGATGATGAGGTTGTTCATATAGGGGCTTaGCATCTTGATCAGCTTTTGGTTCCGGTTCTTGAT | + |
Preference number: 6 (lower is better) Translates to: PTQDDEVVHIGA*HLDQLLVPVLD Trigger: ATCAAGAACCGGAACCAAAAGCTGATCAAGATGTCAAGCCCCTATATGAACAACCTCATCATCCTGGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | ATACTTTATTGCATCATAGAAGGCTTTCAGTCCCTTTaGATTGTCACACTCGGTGTCGTAGAGTCGCAGGTC | + |
Preference number: 6 (lower is better) Translates to: ILYCIIEGFQSL*IVTLGVVESQV Trigger: GACCTGCGACTCTACGACACCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | ACACCCGAACGCTTGCTGTTGTATTCTCTTTCGTATTaGTGTGGAGTCTTCCCTGAGATGGTCTTGATTTGT | + |
Preference number: 6 (lower is better) Translates to: TPERLLLYSLSY*CGVFPEMVLIC Trigger: ACAAATCAAGACCATCTCAGGGAAGACTCCACAGCAATACGAAAGAGAATACAACAGCAAGCGTTCGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | CATACTTTATTGCATCATAGAAGGCTTTCAGTCCCTTaGCATTGTCACACTCGGTGTCGTAGAGTCGCAGGT | + |
Preference number: 6 (lower is better) Translates to: HTLLHHRRLSVP*HCHTRCRRVAG Trigger: ACCTGCGACTCTACGACACCGAGTGTGACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | TGTGAAGTTGCCCAAGCTGAGGATGTCGTTGAGCTCTaGGTAGTGATTCTGTTTGATGTATGTGGTCTTCTC | + |
Preference number: 6 (lower is better) Translates to: CEVAQAEDVVEL*VVILFDVCGLL Trigger: GAGAAGACCACATACATCAAACAGAATCACTACCAAGAGCTCAACGACATCCTCAGCTTGGGCAACTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS GCA 72 bp | TCCAAACACCATCAAATGGTTCGGCCCATACTTTATTaGATCATAGAAGGCTTTCAGTCCCTTTGCATTGTC | + |
Preference number: 6 (lower is better) Translates to: SKHHQMVRPILY*IIEGFQSLCIV Trigger: GACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAACCATTTGATGGTGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |
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CDS CAA 72 bp | CTCCAAACACCATCAAATGGTTCGGCCCATACTTTATaGCATCATAGAAGGCTTTCAGTCCCTTTGCATTGT | + |
Preference number: 6 (lower is better) Translates to: LQTPSNGSAHTL*HHRRLSVPLHC Trigger: ACAATGCAAAGGGACTGAAAGCCTTCTATGATGCAATAAAGTATGGGCCGAACCATTTGATGGTGTTTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107749.4 |