Pregenerated sensors for GABBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024462Ensembl transcript IDs: ENSMUST00000025338.16, ENSMUST00000172789.2, ENSMUST00000172792.8, ENSMUST00000173823.8, ENSMUST00000174347.2, ENSMUST00000174456.8
Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGCTCAGCCACCTACTCCAGGCTCCCAGAGCATGCCCACCACTGCTaGGGAATCCAGGAGGCAACAGTAACAGAGGCTACTACCATGGAC | + |
Preference number: 1 (lower is better) Translates to: CSATYSRLPEHAHHC*GIQEATVTEATTMD Trigger: GTCCATGGTAGTAGCCTCTGTTACTGTTGCCTCCTGGATTCCCCAGCAGTGGTGGGCATGCTCTGGGAGCCTGGAGTAGGTGGCTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR GCA 90 bp | ATCTGCTCAGCCACCTACTCCAGGCTCCCAGAGCATGCCCACCACTaGTGGGGAATCCAGGAGGCAACAGTAACAGAGGCTACTACCATG | + |
Preference number: 1 (lower is better) Translates to: ICSATYSRLPEHAHH*WGIQEATVTEATTM Trigger: CATGGTAGTAGCCTCTGTTACTGTTGCCTCCTGGATTCCCCAGCAGTGGTGGGCATGCTCTGGGAGCCTGGAGTAGGTGGCTGAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR CCA 90 bp | GAGAACACAATGGCCAGAGAGGCAAAGGCGAAGGCTGCGTCCTGCTaGCTGGAAAGGATCATGGTGACAGGAGCGGTAATGAGACACAGG | + |
Preference number: 1 (lower is better) Translates to: ENTMAREAKAKAASC*LERIMVTGAVMRHR Trigger: CCTGTGTCTCATTACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCCTCTCTGGCCATTGTGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | CTTGGTGTGCTCAACACATCATGCACGCCTACCCAAGCACACCACTaGACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGC | + |
Preference number: 1 (lower is better) Translates to: LGVLNTSCTPTQAHH*THPQPLCTHRCSIC Trigger: GCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTTGAGCACACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 90 bp | GCAAGGGGTCCACAATCTGCCAGATGGCAAGAGTCAGGATATCCATaGCCACCAGCAGGCCTACAGTGGCGTACAGTTTCCAAGGCTCTA | + |
Preference number: 1 (lower is better) Translates to: ARGPQSARWQESGYP*PPAGLQWRTVSKAL Trigger: TAGAGCCTTGGAAACTGTACGCCACTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGGACCCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | GAAGAGAACACAATGGCCAGAGAGGCAAAGGCGAAGGCTGCGTCCTaGTGGCTGGAAAGGATCATGGTGACAGGAGCGGTAATGAGACAC | + |
Preference number: 1 (lower is better) Translates to: EENTMAREAKAKAAS*WLERIMVTGAVMRH Trigger: GTGTCTCATTACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCCTCTCTGGCCATTGTGTTCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | AGCCCCACTTTTCGAAGAGTTTCACCCGGGTGGGATTGTGGAGTGTaGCGGATGGATGTGTCCGAAAGAACGTTGGAAACCGCTGTCGGT | + |
Preference number: 1 (lower is better) Translates to: SPTFRRVSPGWDCGV*RMDVSERTLETAVG Trigger: ACCGACAGCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | CTTGTTCAAGGCCAAAGCCAAGGCCCAGATAGCATCATAGGCCAGTaGTGCCTCCTGGAAGCCTCCAGTCTCCTCAGGGTGTCTTTTCAG | + |
Preference number: 1 (lower is better) Translates to: LVQGQSQGPDSIIGQ*CLLEASSLLRVSFQ Trigger: CTGAAAAGACACCCTGAGGAGACTGGAGGCTTCCAGGAGGCACCACTGGCCTATGATGCTATCTGGGCCTTGGCTTTGGCCTTGAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 90 bp | GATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTaGTCAAATGTGCACCCACTATCCACTGGAAACAGCCTCCAACCT | + |
Preference number: 1 (lower is better) Translates to: DAASRPVSPSVHAFI*SNVHPLSTGNSLQP Trigger: AGGTTGGAGGCTGTTTCCAGTGGATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 90 bp | CGCTCCTCCAGGTCATCCAGTGTTGAGGTGAAGACCTCGGTAGTCTaGTGGATGGTGGCAATCTTCTTCCAGCCCCACTTTTCGAAGAGT | + |
Preference number: 1 (lower is better) Translates to: RSSRSSSVEVKTSVV*WMVAIFFQPHFSKS Trigger: ACTCTTCGAAAAGTGGGGCTGGAAGAAGATTGCCACCATCCAGCAGACTACCGAGGTCTTCACCTCAACACTGGATGACCTGGAGGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | TCCTTGGCAAAAGTCTCAATGGTTCGGTGCAAGGGGTCCACAATCTaGCAGATGGCAAGAGTCAGGATATCCATGCCCACCAGCAGGCCT | + |
Preference number: 1 (lower is better) Translates to: SLAKVSMVRCKGSTI*QMARVRISMPTSRP Trigger: AGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGGACCCCTTGCACCGAACCATTGAGACTTTTGCCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | TTCTTCCAGCCCCACTTTTCGAAGAGTTTCACCCGGGTGGGATTGTaGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTTGGAAACCGC | + |
Preference number: 1 (lower is better) Translates to: FFQPHFSKSFTRVGL*SVADGCVRKNVGNR Trigger: GCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGGCTGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | CCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTaGACCCACTATCCACTGGAAACAGCCTCCAACCTGTCCCCATTT | + |
Preference number: 1 (lower is better) Translates to: PARSVHLSMPSFDQM*THYPLETASNLSPF Trigger: AAATGGGGACAGGTTGGAGGCTGTTTCCAGTGGATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 90 bp | AATGTAGGAAGAGAACACAATGGCCAGAGAGGCAAAGGCGAAGGCTaGGTCCTGCTGGCTGGAAAGGATCATGGTGACAGGAGCGGTAAT | + |
Preference number: 1 (lower is better) Translates to: NVGREHNGQRGKGEG*VLLAGKDHGDRSGN Trigger: ATTACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCCTCTCTGGCCATTGTGTTCTCTTCCTACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | TGGCAATCTTCTTCCAGCCCCACTTTTCGAAGAGTTTCACCCGGGTaGGATTGTGGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTTG | + |
Preference number: 1 (lower is better) Translates to: WQSSSSPTFRRVSPG*DCGVWRMDVSERTL Trigger: CAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGGCTGGAAGAAGATTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | AGATGGCAAGAGTCAGGATATCCATGCCCACCAGCAGGCCTACAGTaGCGTACAGTTTCCAAGGCTCTAGGGTCTTCCTCCATTCCTTCT | + |
Preference number: 1 (lower is better) Translates to: RWQESGYPCPPAGLQ*RTVSKALGSSSIPS Trigger: AGAAGGAATGGAGGAAGACCCTAGAGCCTTGGAAACTGTACGCCACTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | CCTCTCTGCTTCAAAGCCTTTTCATTAACTCCAATCTTGAGAGCCTaGGCTTCTCGCTTCCTGGAGCCCACTCAGTTCACAGGACAGTGG | + |
Preference number: 1 (lower is better) Translates to: PLCFKAFSLTPILRA*ASRFLEPTQFTGQW Trigger: CCACTGTCCTGTGAACTGAGTGGGCTCCAGGAAGCGAGAAGCCCAGGCTCTCAAGATTGGAGTTAATGAAAAGGCTTTGAAGCAGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR CCA 90 bp | TCCTCCAGGTCATCCAGTGTTGAGGTGAAGACCTCGGTAGTCTGCTaGATGGTGGCAATCTTCTTCCAGCCCCACTTTTCGAAGAGTTTC | + |
Preference number: 1 (lower is better) Translates to: SSRSSSVEVKTSVVC*MVAIFFQPHFSKSF Trigger: GAAACTCTTCGAAAAGTGGGGCTGGAAGAAGATTGCCACCATCCAGCAGACTACCGAGGTCTTCACCTCAACACTGGATGACCTGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | CAGACAACTGTAATCCCAATACTCAGAAGGCTGAGACAGGAAGCCTaGCCTGACACGAGTCAGGGCAACACACACACACACTACATAGTG | + |
Preference number: 1 (lower is better) Translates to: QTTVIPILRRLRQEA*PDTSQGNTHTHYIV Trigger: CACTATGTAGTGTGTGTGTGTGTTGCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTaGATGGAACAATCACACAGCTCTTTGCACCTCTCTGCTTCAAAG | + |
Preference number: 1 (lower is better) Translates to: TNRALHLIPLCPTNP*MEQSHSSLHLSASK Trigger: CTTTGAAGCAGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR GCA 90 bp | CTAATGCCATCACTCACTAATCGAGCCCTTCATCTCATCCCGCTCTaGCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCAC | + |
Preference number: 1 (lower is better) Translates to: LMPSLTNRALHLIPL*PTNPCMEQSHSSLH Trigger: GTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGTGAGTGATGGCATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR CCA 90 bp | CTTCGGGTGTTGGCAGGGTTCAGCATGACAATCTCCGTGGTGATATaGCCCTCCACCGCCTCAGTCATCTCTTCTACTGTACAATTGATT | + |
Preference number: 1 (lower is better) Translates to: LRVLAGFSMTISVVI*PSTASVISSTVQLI Trigger: AATCAATTGTACAGTAGAAGAGATGACTGAGGCGGTGGAGGGCCATATCACCACGGAGATTGTCATGCTGAACCCTGCCAACACCCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | ATGCCGAGCCATGTATTCATCTTCTTGGAGCTGCAGTGCTCCAGCTaGGGCAGAATGGAGACATCAATGTCTTCCTTTGGTTCCTCCTTG | + |
Preference number: 1 (lower is better) Translates to: MPSHVFIFLELQCSS*GRMETSMSSFGSSL Trigger: CAAGGAGGAACCAAAGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACATGGCTCGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 90 bp | CGCTTCCTGGAGCCCACTCAGTTCACAGGACAGTGGATGAGGTGCTaGGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTT | + |
Preference number: 1 (lower is better) Translates to: RFLEPTQFTGQWMRC*VTLLTALLRFREIL Trigger: AAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACTCAGCACCTCATCCACTGTCCTGTGAACTGAGTGGGCTCCAGGAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR CCA 90 bp | CCTCCTGGAAGCCTCCAGTCTCCTCAGGGTGTCTTTTCAGCCGCTTaGTTAGTTTCTCCACAAATTCCTGTGATGTCATGTTGGAAATGC | + |
Preference number: 1 (lower is better) Translates to: PPGSLQSPQGVFSAA*LVSPQIPVMSCWKC Trigger: GCATTTCCAACATGACATCACAGGAATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACACCCTGAGGAGACTGGAGGCTTCCAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 90 bp | ATGGCCCTCCACCGCCTCAGTCATCTCTTCTACTGTACAATTGATTaGCGGGTCATAGGTTTTGAACCAGTTGTCAGCATACCACCCGAT | + |
Preference number: 1 (lower is better) Translates to: MALHRLSHLFYCTID*RVIGFEPVVSIPPD Trigger: ATCGGGTGGTATGCTGACAACTGGTTCAAAACCTATGACCCGTCAATCAATTGTACAGTAGAAGAGATGACTGAGGCGGTGGAGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | TATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
Preference number: 1 (lower is better) Translates to: YLHRNTSSCLGEERI*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR CCA 90 bp | AGGGAACACTTGAGAGTAAACCTAAGGCCAAGGAGAGGGTATGCATaGCTCAGAAAACACGTACTGGGGAAGAGCCTGCTTAATCATGTG | + |
Preference number: 1 (lower is better) Translates to: REHLRVNLRPRRGYA*LRKHVLGKSLLNHV Trigger: CACATGATTAAGCAGGCTCTTCCCCAGTACGTGTTTTCTGAGCCATGCATACCCTCTCCTTGGCCTTAGGTTTACTCTCAAGTGTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR TCA 90 bp | GTTCTGAGGCGCTTATTCCAGAACCTGGCACTCATTGTTTGCTTGTaGTTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTGCTCA | + |
Preference number: 1 (lower is better) Translates to: VLRRLFQNLALIVCL*FFLSDEEETLHICS Trigger: TGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAATCACAAGCAAACAATGAGTGCCAGGTTCTGGAATAAGCGCCTCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR TCA 90 bp | CTTCTCCAACAGTCGGGACTTCTCTTCCTCATTGTTGTTGGTGGATaGTCCTGTTTTCATTGTGTCCTGTGCTTCAGACTGCCATTCACC | + |
Preference number: 1 (lower is better) Translates to: LLQQSGLLFLIVVGG*SCFHCVLCFRLPFT Trigger: GGTGAATGGCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTGTTGGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | TGTAACCATAGAAAATGCCGAGCCATGTATTCATCTTCTTGGAGCTaGAGTGCTCCAGCTGGGGCAGAATGGAGACATCAATGTCTTCCT | + |
Preference number: 1 (lower is better) Translates to: CNHRKCRAMYSSSWS*SAPAGAEWRHQCLP Trigger: AGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACATGGCTCGGCATTTTCTATGGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 90 bp | TTGTTGGTGGATGATCCTGTTTTCATTGTGTCCTGTGCTTCAGACTaGCATTCACCTCGAGTGATCAACCTGCGCATCTTAGGCACAAAG | + |
Preference number: 1 (lower is better) Translates to: LLVDDPVFIVSCASD*HSPRVINLRILGTK Trigger: CTTTGTGCCTAAGATGCGCAGGTTGATCACTCGAGGTGAATGGCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | GGTTTTCCTTCTCCAACAGTCGGGACTTCTCTTCCTCATTGTTGTTaGTGGATGATCCTGTTTTCATTGTGTCCTGTGCTTCAGACTGCC | + |
Preference number: 1 (lower is better) Translates to: GFPSPTVGTSLPHCC*WMILFSLCPVLQTA Trigger: GGCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTGTTGGAGAAGGAAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 90 bp | ACCTGCCATAAACAGGACAGTGAAATGATAGGCCCATCCAACCCTTaGAGCTTCCATGCAGCAAGAGGGAAGAAGAACCACCTTAAAGAA | + |
Preference number: 1 (lower is better) Translates to: TCHKQDSEMIGPSNP*SFHAARGKKNHLKE Trigger: TTCTTTAAGGTGGTTCTTCTTCCCTCTTGCTGCATGGAAGCTTCAAGGGTTGGATGGGCCTATCATTTCACTGTCCTGTTTATGGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR TCA 90 bp | TCGAGCATCTTGACGCTTCAGGTTTTTAACAGGCACAGCTGGATCTaGGAAGAAACTCTGTCGAAAAGTGATCTCAATCCCAGCCTCTTT | + |
Preference number: 1 (lower is better) Translates to: SSILTLQVFNRHSWI*EETLSKSDLNPSLF Trigger: AAAGAGGCTGGGATTGAGATCACTTTTCGACAGAGTTTCTTCTCAGATCCAGCTGTGCCTGTTAAAAACCTGAAGCGTCAAGATGCTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 90 bp | ACATGGAGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATaGAGAGAAAGCCCTGATAATGTAGGAAGACCCCTGCTGCTGAAA | + |
Preference number: 1 (lower is better) Translates to: TWRRRMMEGDSNAEK*RESPDNVGRPLLLK Trigger: TTTCAGCAGCAGGGGTCTTCCTACATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCTCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR TCA 90 bp | AAATACACAATGCAAGGAGGCACACAAGTAAAACATAGACAACCATaGCATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATC | + |
Preference number: 1 (lower is better) Translates to: KYTMQGGTQVKHRQP*HMHMRKTAWCAQHI Trigger: GATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGTTGTCTATGTTTTACTTGTGTGCCTCCTTGCATTGTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR TCA 90 bp | ATGACAACAAAGAAAAGAAAACCAAGATGCAGTAGTTCTGAGAGATaGTTGTACAGACCCAAAGTGGGACGCATGAGAATAGAGGGAACA | + |
Preference number: 1 (lower is better) Translates to: MTTKKRKPRCSSSER*LYRPKVGRMRIEGT Trigger: TGTTCCCTCTATTCTCATGCGTCCCACTTTGGGTCTGTACAATCATCTCTCAGAACTACTGCATCTTGGTTTTCTTTTCTTTGTTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 90 bp | AAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTGTGTaGACTCCACAGAGAAATGAATCATCATTATTGTTATCTATCATC | + |
Preference number: 1 (lower is better) Translates to: KQIQALGCIISLVLV*TPQRNESSLLLSII Trigger: GATGATAGATAACAATAATGATGATTCATTTCTCTGTGGAGTGCACACAAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR TCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGCGTGTGGTGCAGGCCTaGCTCCAGAGCCCACACTTT | + |
Preference number: 2 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVRVVQA*LQSPHF Trigger: AAAGTGTGGGCTCTGGAGTCAGGCCTGCACCACACG...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR GCA 90 bp | CCACAATCTGCCAGATGGCAAGAGTCAGGATATCCATGCCCACCAGCAGGCCTACTCGATAAGCGTCCATaGCATCCGGGAGCCGCTGGC | + |
Preference number: 2 (lower is better) Translates to: PQSARWQESGYPCPPAGLLDKRP*HPGAAG Trigger: GCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAG...TAGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | AACACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGCCTCGGCTACCAGTGTaGACACAGAGCTGCAGCCGG | + |
Preference number: 2 (lower is better) Translates to: NTSCTPTQAHHCTHPQPLPRLPV*TQSCSR Trigger: CCGGCTGCAGCTCTGTGTCCACACTGGTAGCCGAGG...CAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGTAGCTGCTCGATAAGCGTCCATGCCATCCGGGAGCCGCTGGCATCAAAGACCAGAGTTTCACCCGGGTaGGATTGTGGAGTGTGGCGG | + |
Preference number: 2 (lower is better) Translates to: CSCSISVHAIREPLASKTRVSPG*DCGVWR Trigger: CCGCCACACTCCACAATCCCACCCGGGTGAAACTCT...GGTCTTTGATGCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAGCAGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGCTGGCTGGAAAGGATCATGGTGACAGGAGCGGTAATGAGACACAGGACCGCAGCCAGTGGTGCCTCCTaGAAGCCTCCAGTCTCCTCA | + |
Preference number: 2 (lower is better) Translates to: CWLERIMVTGAVMRHRTAASGAS*KPPVSS Trigger: TGAGGAGACTGGAGGCTTCCAGGAGGCACCACTGGC...TGCGGTCCTGTGTCTCATTACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CAA 90 bp | GGGTGGGATTGTGGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTaGGAAACCGCTGTCGGTTTGACAAGGCTGGTGAGCTGGAGCCAT | + |
Preference number: 2 (lower is better) Translates to: GWDCGVWRMDVSERT*ETAVGLTRLVSWSH Trigger: ATGGCTCCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | CCAATACTCAGAAGGCTGAGACAGGAAGCCTGCCCTGACACGAGTCAGGGCAACAAGTACTTGGTGGCTTaGCCTGGGTCGCACTTGCTG | + |
Preference number: 2 (lower is better) Translates to: PILRRLRQEACPDTSQGNKYLVA*PGSHLL Trigger: CAGCAAGTGCGACCCAGGGCAAGCCACCAAGTACTT...GTTGCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAGCCTTCTGAGTATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | GGAGACTCTTCACATCTGCTCAGCCACCTACTCCAGGCTCCCAGAGCATGCCCACAGAGGCTACTACCATaGACCAAGCAGATCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: GDSSHLLSHLLQAPRACPQRLLP*TKQIQA Trigger: TGCCTGGATCTGCTTGGTCCATGGTAGTAGCCTCTG...TGGGCATGCTCTGGGAGCCTGGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR TCA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGCATGACATATGCACATaGGGAAGACAGCTTGGTGTG | + |
Preference number: 2 (lower is better) Translates to: RSFPQETPQCERDAASRPHDICT*GRQLGV Trigger: CACACCAAGCTGTCTTCCTCATGTGCATATGTCATG...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGCGGCCCTGTGGTCATTaGTCTTTTCAGTGGACACAC | + |
Preference number: 2 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVRPCGH*SFQWTH Trigger: GTGTGTCCACTGAAAAGATCAATGACCACAGGGCCG...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGGCACCCACTATCCACTaGAAACAGCCTCCAACCTGT | + |
Preference number: 2 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVAPTIH*KQPPTC Trigger: ACAGGTTGGAGGCTGTTTCCAGTGGATAGTGGGTGC...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGACCCGGGTGGGATTGTaGAGTGTGGCGGATGGATGT | + |
Preference number: 2 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVTRVGL*SVADGC Trigger: ACATCCATCCGCCACACTCCACAATCCCACCCGGGT...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCCTGAGACAGGAAGCCTaGCCTGACACGAGTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: PGQSICPCLHLIKCAPTILRQEA*PDTSQG Trigger: GCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAG...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGGTGCTGTCGTAGTAGCCGATCTTCTTGTAGCTGCCGCCCTGTAGCTGCTCGAACAAGGCTGGTGAGCTaGAGCCATATGAGAGCACAA | + |
Preference number: 2 (lower is better) Translates to: WCCRSSRSSCSCRPVAARTRLVS*SHMRAQ Trigger: TTGTGCTCTCATATGGCTCCAGCTCACCAGCCTTGT...TCGAGCAGCTACAGGGCGGCAGCTACAAGAAGATCGGCTACTACGACAGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGGAAGACCCCTGCTGCTaGAATGACAGGAGTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVEDPCC*NDRSCC Trigger: ACAGCAACTCCTGTCATTTCAGCAGCAGGGGTCTTC...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGGTCCCCTGGAAGAAGCAA | + |
Preference number: 2 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVCVCVW*VPWKKQ Trigger: TTGCTTCTTCCAGGGGACTCACCACACACACACACA...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCCCTTCCCTCCCCTGCTaGCCTCATCCTTCTCGATAC | + |
Preference number: 2 (lower is better) Translates to: PGQSICPCLHLIKCAPTIPSLPC*PHPSRY Trigger: GTATCGAGAAGGATGAGGCCAGCAGGGGAGGGAAGG...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGGAAGACACAGGGACATaGAGGAGAAGGATGATGGAA | + |
Preference number: 2 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVEDTGT*RRRMME Trigger: TTCCATCATCCTTCTCCTCCATGTCCCTGTGTCTTC...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTAGGAAAGATCATCCTTaGTGCTGTCGTAGTAGCCGA | + |
Preference number: 2 (lower is better) Translates to: VKGMLPPARSVHLSMPSFRKDHP*CCRSSR Trigger: TCGGCTACTACGACAGCACCAAGGATGATCTTTCCT...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CAA 90 bp | ATCTTCTTCCAGCCCCACTTTTCGAAGAGTTTCACCCGGGTGGGATaGTGGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTTGGAAAC | + |
Preference number: 2 (lower is better) Translates to: IFFQPHFSKSFTRVG*WSVADGCVRKNVGN Trigger: GTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGGCTGGAAGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATCTCCAGGCGCACTCCTaGACGGCCACCTCCTCCAGA | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDLQAHS*TATSSR Trigger: TCTGGAGGAGGTGGCCGTTCAGGAGTGCGCCTGGAG...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGTGCCGAGACTGGAGCTaGTGGCGCAGTTCAGAGACA | + |
Preference number: 2 (lower is better) Translates to: CVCVCVCVVSPLEEATFKCRDWS*WRSSET Trigger: TGTCTCTGAACTGCGCCATCAGCTCCAGTCTCGGCA...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCCTTCCCTCCCCTGCTaGCCTCATCCTTCTCGATAC | + |
Preference number: 2 (lower is better) Translates to: CVCVCVCVVSPLEEATFKPSLPC*PHPSRY Trigger: GTATCGAGAAGGATGAGGCCAGCAGGGGAGGGAAGG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | AACACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGCCCAGATGCACAGAATaGCATGTATTTCTAAGAGGG | + |
Preference number: 2 (lower is better) Translates to: NTSCTPTQAHHCTHPQPLPRCTE*HVFLRG Trigger: CCCTCTTAGAAATACATGTCATTCTGTGCATCTGGG...CAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CGAAAGAACGTTGGAAACCGCTGTCGGTTTGACAAGGCTGGTGAGCTGGAGCCACCCAGATGCACAGAATaGCATGTATTTCTAAGAGGG | + |
Preference number: 2 (lower is better) Translates to: RKNVGNRCRFDKAGELEPPRCTE*HVFLRG Trigger: CCCTCTTAGAAATACATGTCATTCTGTGCATCTGGG...TGGCTCCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTCCAACGTTCTTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCGAAGACCCCTGCTGCTaGAATGACAGGAGTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: PGQSICPCLHLIKCAPTIEDPCC*NDRSCC Trigger: ACAGCAACTCCTGTCATTTCAGCAGCAGGGGTCTTC...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | TGTAGCTGCTCGATAAGCGTCCATGCCATCCGGGAGCCGCTGGCATCAAAGACCAAACATAGACAACCATaGCATATGCACATGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: CSCSISVHAIREPLASKTKHRQP*HMHMRK Trigger: CTTCCTCATGTGCATATGTCATGGTTGTCTATGTTT...GGTCTTTGATGCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAGCAGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | GACCGCAACATTGTAGATAGCCATGCCCACGGCCCTGTGGTCATTGATCTTTTCTGCACATGCCTCTGCTaGAAGAAGACAGGACATCAG | + |
Preference number: 2 (lower is better) Translates to: DRNIVDSHAHGPVVIDLFCTCLC*KKTGHQ Trigger: CTGATGTCCTGTCTTCTTTCAGCAGAGGCATGTGCA...GAAAAGATCAATGACCACAGGGCCGTGGGCATGGCTATCTACAATGTTGCGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | GGATATCCATGCCCACCAGCAGGCCTACAGTGGCGTACAGTTTCCAAGGCTCTAGTCCATGCCTTCATTTaGTCAAATGTGCACCCACTA | + |
Preference number: 2 (lower is better) Translates to: GYPCPPAGLQWRTVSKALVHAFI*SNVHPL Trigger: TAGTGGGTGCACATTTGATCAAATGAAGGCATGGAC...TAGAGCCTTGGAAACTGTACGCCACTGTAGGCCTGCTGGTGGGCATGGATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGACAGGAAGCCTaGCCTGACACGAGTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: KEDRTSARQTTVIPILRRLRQEA*PDTSQG Trigger: GCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAG...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGATCATCTTCTTGGAGCTaGAGTGCTCCAGCTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: DRTSARQTTVIPILRRLRSSSWS*SAPAGA Trigger: TGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGA...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGCTGGCTGGAAAGGATCATGGTGACAGGAGCGGTAATGAGACACAGGACCGCAATGAGGAAGACAGCTTaGTGTGCTCAACACATCATG | + |
Preference number: 2 (lower is better) Translates to: CWLERIMVTGAVMRHRTAMRKTA*CAQHIM Trigger: CATGATGTGTTGAGCACACCAAGCTGTCTTCCTCAT...TGCGGTCCTGTGTCTCATTACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGACCTCGGTAGTCTGCTaGATGGTGGCAATCTTCTTC | + |
Preference number: 2 (lower is better) Translates to: HTPTTTVHSQVQHMQTQVTSVVC*MVAIFF Trigger: GAAGAAGATTGCCACCATCCAGCAGACTACCGAGGT...CACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CAA 90 bp | GCCTCCTGGAAGCCTCCAGTCTCCTCAGGGTGTCTTTTCAGCCGCTaGGTTAGTTTCTCCACAAATTCCTGTGATGTCATGTTGGAAATG | + |
Preference number: 2 (lower is better) Translates to: ASWKPPVSSGCLFSR*VSFSTNSCDVMLEM Trigger: CATTTCCAACATGACATCACAGGAATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACACCCTGAGGAGACTGGAGGCTTCCAGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | CCACAATCTGCCAGATGGCAAGAGTCAGGATATCCATGCCCACCAGCAGGCCTAAGTAGTTCTGAGAGATaGTTGTACAGACCCAAAGTG | + |
Preference number: 2 (lower is better) Translates to: PQSARWQESGYPCPPAGLSSSER*LYRPKV Trigger: CACTTTGGGTCTGTACAATCATCTCTCAGAACTACT...TAGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | GTCATAGGTTTTGAACCAGTTGTCAGCATACCACCCGATGAGAAACCAGACATACCTTCCCTCCCCTGCTaGCCTCATCCTTCTCGATAC | + |
Preference number: 2 (lower is better) Translates to: VIGFEPVVSIPPDEKPDIPSLPC*PHPSRY Trigger: GTATCGAGAAGGATGAGGCCAGCAGGGGAGGGAAGG...TATGTCTGGTTTCTCATCGGGTGGTATGCTGACAACTGGTTCAAAACCTATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGATCTCCGTGGTGATATaGCCCTCCACCGCCTCAGTC | + |
Preference number: 2 (lower is better) Translates to: KEDRTSARQTTVIPILRRISVVI*PSTASV Trigger: GACTGAGGCGGTGGAGGGCCATATCACCACGGAGAT...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCATGTGTGTGTGTGTGGTaGGTCCCCTGGAAGAAGCAA | + |
Preference number: 2 (lower is better) Translates to: TMTYAHEEDSLVCSTHHACVCVW*VPWKKQ Trigger: TTGCTTCTTCCAGGGGACTCACCACACACACACACA...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | ATCCCGCTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACAGTAGTTCTGAGAGATaGTTGTACAGACCCAAAGTG | + |
Preference number: 2 (lower is better) Translates to: IPLCPTNPCMEQSHSSLHSSSER*LYRPKV Trigger: CACTTTGGGTCTGTACAATCATCTCTCAGAACTACT...GTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR GCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCCTGTGCACTCACAGGTaGAGCATATGCAAACACAAG | + |
Preference number: 2 (lower is better) Translates to: PGQSICPCLHLIKCAPTILCTHR*SICKHK Trigger: CTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAG...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR CAA 90 bp | CGGTTTTCCTTCTCCAACAGTCGGGACTTCTCTTCCTCATTGTTGTaGGTGGATGATCCTGTTTTCATTGTGTCCTGTGCTTCAGACTGC | + |
Preference number: 2 (lower is better) Translates to: RFSFSNSRDFSSSLL*VDDPVFIVSCASDC Trigger: GCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTGTTGGAGAAGGAAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATAAGGCACAGCTGGATCTaGGAAGAAACTCTGTCGAAA | + |
Preference number: 2 (lower is better) Translates to: TPTTTVHSQVQHMQTQVIRHSWI*EETLSK Trigger: TTTCGACAGAGTTTCTTCTCAGATCCAGCTGTGCCT...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAAGAAACACATCCAGCTaGCTAGGAGAGGAGAGGATA | + |
Preference number: 2 (lower is better) Translates to: DRTSARQTTVIPILRRLRRNTSS*LGEERI Trigger: TATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCT...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATGGAACAGTCCATCTGTCCATaGCTTCATTTGATCAAATGT | + |
Preference number: 2 (lower is better) Translates to: TNRALHLIPLCPTNPCMEQSICP*LHLIKC Trigger: ACATTTGATCAAATGAAGGCATGGACAGATGGACTG...TTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR GCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATATCATAGGCCAGTGGTaGCTCCTGGAAGCCTCCAGT | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDIIGQW*LLEASS Trigger: ACTGGAGGCTTCCAGGAGGCACCACTGGCCTATGAT...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCATGAGGAAGACAGCTTaGTGTGCTCAACACATCATG | + |
Preference number: 2 (lower is better) Translates to: PGQSICPCLHLIKCAPTIMRKTA*CAQHIM Trigger: CATGATGTGTTGAGCACACCAAGCTGTCTTCCTCAT...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | TGTGAAGACTGTGTGGACCCACCAGATCTTGGTGAACATAGAGCCATAGCCCAGTCCACTTGTCTGTTTTaGACCAGGAAAGATCATCCT | + |
Preference number: 2 (lower is better) Translates to: CEDCVDPPDLGEHRAIAQSTCLF*TRKDHP Trigger: AGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGA...CTGGGCTATGGCTCTATGTTCACCAAGATCTGGTGGGTCCACACAGTCTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATCACCCACAACCACTGTaGACTCACAGGTGCAGCATA | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDHPQPL*THRCSI Trigger: TATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTG...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CCA 90 bp | CTACCATGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTATACAAGACAGCCTATaGGAGACAAACGAGATGCCC | + |
Preference number: 2 (lower is better) Translates to: LPWTKQIQALGCIISLVLIQDSL*ETNEMP Trigger: GGGCATCTCGTTTGTCTCCCATAGGCTGTCTTGTAT...AAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR-3UTR TCA 90 bp | AGTCAGATTGTTCAGGTTGGGCTGGGAGTTCTGGATATAACGATCCACTTGTCTCATGGAGGAGAAGGATaGTGGAAGGAGATTCTAATG | + |
Preference number: 2 (lower is better) Translates to: SQIVQVGLGVLDITIHLSHGGEG*WKEILM Trigger: CATTAGAATCTCCTTCCATCATCCTTCTCCTCCATG...AGACAAGTGGATCGTTATATCCAGAACTCCCAGCCCAACCTGAACAATCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR TCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCAAACTCTGTCGAAAAGTaGTCTCAATCCCAGCCTCTT | + |
Preference number: 2 (lower is better) Translates to: TMTYAHEEDSLVCSTHHANSVEK*SQSQPL Trigger: AAGAGGCTGGGATTGAGATCACTTTTCGACAGAGTT...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR GCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGAAGAAACACATCCAGCTaGCTAGGAGAGGAGAGGATA | + |
Preference number: 2 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRRNTSS*LGEERI Trigger: TATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCT...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR-3UTR GCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACTGTGCACTCACAGGTaGAGCATATGCAAACACAAG | + |
Preference number: 2 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRLCTHR*SICKHK Trigger: CTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAG...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
||
3UTR-3UTR GCA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCCTCTTTGCACCTCTCTaGTTCAAAGCCTTTTCATTA | + |
Preference number: 2 (lower is better) Translates to: SSQDAQSSLENGFQVLRRLFAPL*FKAFSL Trigger: TAATGAAAAGGCTTTGAAGCAGAGAGGTGCAAAGAG...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR-3UTR GCA 90 bp | CTACCATGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTAATCACACAGCTCTTTaGACCTCTCTGCTTCAAAGC | + |
Preference number: 2 (lower is better) Translates to: LPWTKQIQALGCIISLVLNHTAL*TSLLQS Trigger: GCTTTGAAGCAGAGAGGTGCAAAGAGCTGTGTGATT...AAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR-3UTR GCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCAAAAGATCATCCTTGGTaGTGTCGTAGTAGCCGATCT | + |
Preference number: 2 (lower is better) Translates to: TMTYAHEEDSLVCSTHHAKDHPW*CRSSRS Trigger: AGATCGGCTACTACGACAGCACCAAGGATGATCTTT...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CCA 90 bp | GTCATAGGTTTTGAACCAGTTGTCAGCATACCACCCGATGAGAAACCAGACATAGAAGACACAGGGACATaGAGGAGAAGGATGATGGAA | + |
Preference number: 2 (lower is better) Translates to: VIGFEPVVSIPPDEKPDIEDTGT*RRRMME Trigger: TTCCATCATCCTTCTCCTCCATGTCCCTGTGTCTTC...TATGTCTGGTTTCTCATCGGGTGGTATGCTGACAACTGGTTCAAAACCTATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CAA 90 bp | AATTCACGGTTTTCCTTCTCCAACAGTCGGGACTTCTCTTCCTCATaGTTGTTGGTGGATGATCCTGTTTTCATTGTGTCCTGTGCTTCA | + |
Preference number: 2 (lower is better) Translates to: NSRFSFSNSRDFSSS*LLVDDPVFIVSCAS Trigger: TGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTGTTGGAGAAGGAAAACCGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR TCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAATTGTTGTTGGTGGATaGTCCTGTTTTCATTGTGTC | + |
Preference number: 2 (lower is better) Translates to: DRTSARQTTVIPILRRLRIVVGG*SCFHCV Trigger: GACACAATGAAAACAGGATCATCCACCAACAACAAT...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR GCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATCCCTTGAAGCTTCCATaGAGCAAGAGGGAAGAAGAA | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDPLKLP*SKREEE Trigger: TTCTTCTTCCCTCTTGCTGCATGGAAGCTTCAAGGG...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR-3UTR GCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATATGTCATGTTGGAAATaGTTCGGGTGTTGGCAGGGT | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDMSCWK*FGCWQG Trigger: ACCCTGCCAACACCCGAAGCATTTCCAACATGACAT...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTAATGCTGAGAAATaGAGAGAAAGCCCTGATAAT | + |
Preference number: 2 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCSNAEK*RESPDN Trigger: ATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGA...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR CAA 90 bp | GCATATGCAAACACAAGTGATAGCAGCATTCAGAAAAGAACATATTaGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGG | + |
Preference number: 2 (lower is better) Translates to: AYANTSDSSIQKRTY*HRNTSSCLGEERIW Trigger: CCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTTCTTTTCTGAATGCTGCTATCACTTGTGTTTGCATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR-3UTR TCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATCCCAGATGCACAGAATaGCATGTATTTCTAAGAGGG | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDPRCTE*HVFLRG Trigger: CCCTCTTAGAAATACATGTCATTCTGTGCATCTGGG...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR-3UTR TCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGCCAGTCCTAGAAGAGTaGTACAGAGGATGTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: FQERRVYIYKSLGAQKREPVLEE*YRGCSK Trigger: CTTAGAACATCCTCTGTATCACTCTTCTAGGACTGG...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR TCA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGATCTTCCATCTGCCCTTaGATTATCACTGTTCTGGTC | + |
Preference number: 2 (lower is better) Translates to: SRREEYIYTRVWVPRKGRSSICP*IITVLV Trigger: GACCAGAACAGTGATAATTCAAGGGCAGATGGAAGA...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGAGTCACACTGTTAACTaGTTTATTGAGATTCAGGGA | + |
Preference number: 2 (lower is better) Translates to: CVCVCVCVVSPLEEATFKSHTVN*FIEIQG Trigger: TCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
||
3UTR-3UTR CCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATATGAGGAAGACAGCTTaGTGTGCTCAACACATCATG | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDMRKTA*CAQHIM Trigger: CATGATGTGTTGAGCACACCAAGCTGTCTTCCTCAT...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR-3UTR GCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTAAATTCTTCCCAAGATaGTCAGAGTTCCTTAGAGAA | + |
Preference number: 2 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSKFFPR*SEFLRE Trigger: TTCTCTAAGGAACTCTGAGCATCTTGGGAAGAATTT...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR-3UTR TCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATAAACATAGACAACCATaGCATATGCACATGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDKHRQP*HMHMRK Trigger: CTTCCTCATGTGCATATGTCATGGTTGTCTATGTTT...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR-3UTR TCA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGAAATTCCATTATAGAGTaGATAGCAAAGGACCAGTCC | + |
Preference number: 2 (lower is better) Translates to: SRREEYIYTRVWVPRKGRNSIIE*IAKDQS Trigger: GGACTGGTCCTTTGCTATTCACTCTATAATGGAATT...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR TCA 90 bp | ACAGTCTTAAGAGCTCAAAATAAGGACTTAGTCAAAATGAAGAACCCTGAAGCTCCAGTCCTAGAAGAGTaGTACAGAGGATGTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: TVLRAQNKDLVKMKNPEAPVLEE*YRGCSK Trigger: CTTAGAACATCCTCTGTATCACTCTTCTAGGACTGG...AGCTTCAGGGTTCTTCATTTTGACTAAGTCCTTATTTTGAGCTCTTAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR CCA 90 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGGAATTATCACTGTTCTaGTCATTCTGCCCCAATTTT | + |
Preference number: 2 (lower is better) Translates to: HSRREEYIYTRVWVPRKGELSLF*SFCPNF Trigger: AAAATTGGGGCAGAATGACCAGAACAGTGATAATTC...CCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR GCA 90 bp | ACAGTCTTAAGAGCTCAAAATAAGGACTTAGTCAAAATGAAGAACCCTGAAGCTGAAAAGGGAGACGTTTaGAGAAAAGACAGCAAAGAG | + |
Preference number: 2 (lower is better) Translates to: TVLRAQNKDLVKMKNPEAEKGDV*RKDSKE Trigger: CTCTTTGCTGTCTTTTCTGCAAACGTCTCCCTTTTC...AGCTTCAGGGTTCTTCATTTTGACTAAGTCCTTATTTTGAGCTCTTAAGACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR-3UTR CCA 90 bp | ACAGTCTTAAGAGCTCAAAATAAGGACTTAGTCAAAATGAAGAACCCTGAAGCTGAATTATCACTGTTCTaGTCATTCTGCCCCAATTTT | + |
Preference number: 2 (lower is better) Translates to: TVLRAQNKDLVKMKNPEAELSLF*SFCPNF Trigger: AAAATTGGGGCAGAATGACCAGAACAGTGATAATTC...AGCTTCAGGGTTCTTCATTTTGACTAAGTCCTTATTTTGAGCTCTTAAGACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR TCA 72 bp | TGGCGCCGGGAGCGGATCTGCTGCCGAGACTGGAGCTaGTGGCGCAGTTCAGAGACACGCTCCTCTTTCTCG | + |
Preference number: 3 (lower is better) Translates to: WRRERICCRDWS*WRSSETRSSFS Trigger: CGAGAAAGAGGAGCGTGTCTCTGAACTGCGCCATCAGCTCCAGTCTCGGCAGCAGATCCGCTCCCGGCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | GCCACCTACTCCAGGCTCCCAGAGCATGCCCACCACTaGTGGGGAATCCAGGAGGCAACAGTAACAGAGGCT | + |
Preference number: 3 (lower is better) Translates to: ATYSRLPEHAHH*WGIQEATVTEA Trigger: AGCCTCTGTTACTGTTGCCTCCTGGATTCCCCAGCAGTGGTGGGCATGCTCTGGGAGCCTGGAGTAGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR CCA 72 bp | GGCCAAAGCCAAGGCCCAGATAGCATCATAGGCCAGTaGTGCCTCCTGGAAGCCTCCAGTCTCCTCAGGGTG | + |
Preference number: 3 (lower is better) Translates to: GQSQGPDSIIGQ*CLLEASSLLRV Trigger: CACCCTGAGGAGACTGGAGGCTTCCAGGAGGCACCACTGGCCTATGATGCTATCTGGGCCTTGGCTTTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 72 bp | ACAATGGCCAGAGAGGCAAAGGCGAAGGCTGCGTCCTaGTGGCTGGAAAGGATCATGGTGACAGGAGCGGTA | + |
Preference number: 3 (lower is better) Translates to: TMAREAKAKAAS*WLERIMVTGAV Trigger: TACCGCTCCTGTCACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCCTCTCTGGCCATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | ACCTACTCCAGGCTCCCAGAGCATGCCCACCACTGCTaGGGAATCCAGGAGGCAACAGTAACAGAGGCTACT | + |
Preference number: 3 (lower is better) Translates to: TYSRLPEHAHHC*GIQEATVTEAT Trigger: AGTAGCCTCTGTTACTGTTGCCTCCTGGATTCCCCAGCAGTGGTGGGCATGCTCTGGGAGCCTGGAGTAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR GCA 72 bp | AGAGAACACAATGGCCAGAGAGGCAAAGGCGAAGGCTaGGTCCTGCTGGCTGGAAAGGATCATGGTGACAGG | + |
Preference number: 3 (lower is better) Translates to: REHNGQRGKGEG*VLLAGKDHGDR Trigger: CCTGTCACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCCTCTCTGGCCATTGTGTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | GAGTTTCACCCGGGTGGGATTGTGGAGTGTGGCGGATaGATGTGTCCGAAAGAACGTTGGAAACCGCTGTCG | + |
Preference number: 3 (lower is better) Translates to: EFHPGGIVECGG*MCPKERWKPLS Trigger: CGACAGCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | GAGTCAGGATATCCATGCCCACCAGCAGGCCTACAGTaGCGTACAGTTTCCAAGGCTCTAGGGTCTTCCTCC | + |
Preference number: 3 (lower is better) Translates to: ESGYPCPPAGLQ*RTVSKALGSSS Trigger: GGAGGAAGACCCTAGAGCCTTGGAAACTGTACGCCACTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR-3UTR CAA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGTTAATCATGTGCATGTaGGGTGCACATGCCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: RSFPQETPQCERDAASRPLIMCM*GAHASA Trigger: AGCAGAGGCATGTGCACCCAACATGCACATGATTAA...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | CTGGTTGTTGTAGTTAAAGTCCTCCAGGCGCACTCCTaGACGGCCACCTCCTCCAGAGGTCTTGTTCAAGGC | + |
Preference number: 3 (lower is better) Translates to: LVVVVKVLQAHS*TATSSRGLVQG Trigger: GCCTTGAACAAGACCTCTGGAGGAGGTGGCCGTTCAGGAGTGCGCCTGGAGGACTTTAACTACAACAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | GGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATaGCTTCATTTGATCAAATGTGCACCCACTATCCAC | + |
Preference number: 3 (lower is better) Translates to: GCCLPPGQSICP*LHLIKCAPTIH Trigger: GTGGATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | TTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTaGTCAGCCACCTACTCCAGGCTCCCAGAGCATGCC | + |
Preference number: 3 (lower is better) Translates to: FFLSDEEETLHI*SATYSRLPEHA Trigger: GGCATGCTCTGGGAGCCTGGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR GCA 72 bp | CCACAATCTGCCAGATGGCAAGAGTCAGGATATCCATaGCCACCAGCAGGCCTACAGTGGCGTACAGTTTCC | + |
Preference number: 3 (lower is better) Translates to: PQSARWQESGYP*PPAGLQWRTVS Trigger: GGAAACTGTACGCCACTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TCTTCCAGCCCCACTTTTCGAAGAGTTTCACCCGGGTaGGATTGTGGAGTGTGGCGGATGGATGTGTCCGAA | + |
Preference number: 3 (lower is better) Translates to: SSSPTFRRVSPG*DCGVWRMDVSE Trigger: TTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGGCTGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | AGACTAAAGCCTAAGCCCAAGAGCCAAAGGCGGGCCTaGCAGACAAATGGGAACTGGCTTCTCCCTATGTGG | + |
Preference number: 3 (lower is better) Translates to: RLKPKPKSQRRA*QTNGNWLLPMW Trigger: CCACATAGGGAGAAGCCAGTTCCCATTTGTCTGCCAGGCCCGCCTTTGGCTCTTGGGCTTAGGCTTTAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGTGTCCATGCCTTCATTaGATCAAATGTGCACCCACT | + |
Preference number: 3 (lower is better) Translates to: RSFPQETPQCERDAASRPCPCLH*IKCAPT Trigger: AGTGGGTGCACATTTGATCAAATGAAGGCATGGACA...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | GTAATCCCAATACTCAGAAGGCTGAGACAGGAAGCCTaGCCTGACACGAGTCAGGGCAACACACACACACAC | + |
Preference number: 3 (lower is better) Translates to: VIPILRRLRQEA*PDTSQGNTHTH Trigger: GTGTGTGTGTGTGTTGCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAGCCTTCTGAGTATTGGGATTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | GCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTaGATGGAACAATCACACAGCTCTTTGCACCTCTCT | + |
Preference number: 3 (lower is better) Translates to: ALHLIPLCPTNP*MEQSHSSLHLS Trigger: AGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR CCA 72 bp | TGGGGTCGTTGTAGAGTAGTTCATACAAGTACTTGGTaGCTTGCCCTGGGTCGCACTTGCTGTCGTGGTGGA | + |
Preference number: 3 (lower is better) Translates to: WGRCRVVHTSTW*LALGRTCCRGG Trigger: TCCACCACGACAGCAAGTGCGACCCAGGGCAAGCCACCAAGTACTTGTATGAACTACTCTACAACGACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | CCCCACTTTTCGAAGAGTTTCACCCGGGTGGGATTGTaGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTT | + |
Preference number: 3 (lower is better) Translates to: PHFSKSFTRVGL*SVADGCVRKNV Trigger: AACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAAAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGTTAATCATGTGCATGTaGGGTGCACATGCCTCTGCT | + |
Preference number: 3 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVLIMCM*GAHASA Trigger: AGCAGAGGCATGTGCACCCAACATGCACATGATTAA...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | TCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTaGTCAAATGTGCACCCACTATCCACTGGAAACAGC | + |
Preference number: 3 (lower is better) Translates to: SRPVSPSVHAFI*SNVHPLSTGNS Trigger: GCTGTTTCCAGTGGATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | AGGTCATCCAGTGTTGAGGTGAAGACCTCGGTAGTCTaGTGGATGGTGGCAATCTTCTTCCAGCCCCACTTT | + |
Preference number: 3 (lower is better) Translates to: RSSSVEVKTSVV*WMVAIFFQPHF Trigger: AAAGTGGGGCTGGAAGAAGATTGCCACCATCCAGCAGACTACCGAGGTCTTCACCTCAACACTGGATGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | AAAGTCTCAATGGTTCGGTGCAAGGGGTCCACAATCTaGCAGATGGCAAGAGTCAGGATATCCATGCCCACC | + |
Preference number: 3 (lower is better) Translates to: KVSMVRCKGSTI*QMARVRISMPT Trigger: GGTGGGCATGGATATCCTGACTCTTGCCATCTGGCAGATTGTGGACCCCTTGCACCGAACCATTGAGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TTTCGAAGAGTTTCACCCGGGTGGGATTGTGGAGTGTaGCGGATGGATGTGTCCGAAAGAACGTTGGAAACC | + |
Preference number: 3 (lower is better) Translates to: FRRVSPGWDCGV*RMDVSERTLET Trigger: GGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACAATCCCACCCGGGTGAAACTCTTCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TCATCCAGTGTTGAGGTGAAGACCTCGGTAGTCTGCTaGATGGTGGCAATCTTCTTCCAGCCCCACTTTTCG | + |
Preference number: 3 (lower is better) Translates to: SSSVEVKTSVVC*MVAIFFQPHFS Trigger: CGAAAAGTGGGGCTGGAAGAAGATTGCCACCATCCAGCAGACTACCGAGGTCTTCACCTCAACACTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TTGGCAGGGTTCAGCATGACAATCTCCGTGGTGATATaGCCCTCCACCGCCTCAGTCATCTCTTCTACTGTA | + |
Preference number: 3 (lower is better) Translates to: LAGFSMTISVVI*PSTASVISSTV Trigger: TACAGTAGAAGAGATGACTGAGGCGGTGGAGGGCCATATCACCACGGAGATTGTCATGCTGAACCCTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGGAAACCGCTGTCGGTTaGACAAGGCTGGTGAGCTGG | + |
Preference number: 3 (lower is better) Translates to: CVCVCVCVVSPLEEATFKETAVG*TRLVSW Trigger: CCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTC...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGATCCACTTGTCTGTTTaGGACCAGGAAAGATCATCC | + |
Preference number: 3 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVIHLSV*DQERSS Trigger: GGATGATCTTTCCTGGTCCAAAACAGACAAGTGGAT...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | TGTGAAGACTGTGTGGACCCACCAGATCTTGGTGAACATAGAGCCATAGCCCAGCATGGCCCGGTAGATTaGGTCTGTAATGGTCTGGTT | + |
Preference number: 3 (lower is better) Translates to: CEDCVDPPDLGEHRAIAQHGPVD*VCNGLV Trigger: AACCAGACCATTACAGACCAAATCTACCGGGCCATG...CTGGGCTATGGCTCTATGTTCACCAAGATCTGGTGGGTCCACACAGTCTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATaGAACAATCACACAGCTCTTTGCACCTCTCTGCTT | + |
Preference number: 3 (lower is better) Translates to: FISSRSAPLIPA*NNHTALCTSLL Trigger: AAGCAGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR-3UTR CAA 90 bp | TGCTTCAGACTGCCATTCACCTCGAGTGATCAACCTGCGCATCTTAGGCACAAAGTCAGATTGTTCAGGTaGGGCTGGGAGTTCTGGATA | + |
Preference number: 3 (lower is better) Translates to: CFRLPFTSSDQPAHLRHKVRLFR*GWEFWI Trigger: TATCCAGAACTCCCAGCCCAACCTGAACAATCTGAC...TTTGTGCCTAAGATGCGCAGGTTGATCACTCGAGGTGAATGGCAGTCTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | GAAAATGCCGAGCCATGTATTCATCTTCTTGGAGCTGCAGTGCTCCAGCTGGGGCATCAATGTCTTCCTTaGGTTCCTCCTTGGCAAAAG | + |
Preference number: 3 (lower is better) Translates to: ENAEPCIHLLGAAVLQLGHQCLP*VPPWQK Trigger: CTTTTGCCAAGGAGGAACCAAAGGAAGACATTGATG...CCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACATGGCTCGGCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGGTCCCCTGGAAGAAGCAACATTTAAGGAGAGGA | + |
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVW*VPWKKQHLRRG Trigger: TCCTCTCCTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | GCACAGCTGGATCTGAGAAGAAACTCTGTCGAAAAGTaGTCTCAATCCCAGCCTCTTTCACTCGCTCCTCCA | + |
Preference number: 3 (lower is better) Translates to: AQLDLRRNSVEK*SQSQPLSLAPP Trigger: TGGAGGAGCGAGTGAAAGAGGCTGGGATTGAGATCACTTTTCGACAGAGTTTCTTCTCAGATCCAGCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | ACTTGTCTGTTTTGGACCAGGAAAGATCATCCTTGGTaGTGTCGTAGTAGCCGATCTTCTTGTAGCTGCCGC | + |
Preference number: 3 (lower is better) Translates to: TCLFWTRKDHPW*CRSSRSSCSCR Trigger: GCGGCAGCTACAAGAAGATCGGCTACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR GCA 72 bp | AGAAAATGCCGAGCCATGTATTCATCTTCTTGGAGCTaGAGTGCTCCAGCTGGGGCAGAATGGAGACATCAA | + |
Preference number: 3 (lower is better) Translates to: RKCRAMYSSSWS*SAPAGAEWRHQ Trigger: TTGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACATGGCTCGGCATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | AGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: RNTSSCLGEERI*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | CAAGGAGAGGGTATGCATGGCTCAGAAAACACGTACTaGGGAAGAGCCTGCTTAATCATGTGCATGTTGGGT | + |
Preference number: 3 (lower is better) Translates to: QGEGMHGSENTY*GRACLIMCMLG Trigger: ACCCAACATGCACATGATTAAGCAGGCTCTTCCCCAGTACGTGTTTTCTGAGCCATGCATACCCTCTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | GAGCCCACTCAGTTCACAGGACAGTGGATGAGGTGCTaGGTCACACTGTTAACTGCTTTATTGAGATTCAGG | + |
Preference number: 3 (lower is better) Translates to: EPTQFTGQWMRC*VTLLTALLRFR Trigger: CCTGAATCTCAATAAAGCAGTTAACAGTGTGACTCAGCACCTCATCCACTGTCCTGTGAACTGAGTGGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR GCA 72 bp | GAAAACACGTACTGGGGAAGAGCCTGCTTAATCATGTaGATGTTGGGTGCACATGCCTCTGCTGAAAGAAGA | + |
Preference number: 3 (lower is better) Translates to: ENTYWGRACLIM*MLGAHASAERR Trigger: TCTTCTTTCAGCAGAGGCATGTGCACCCAACATGCACATGATTAAGCAGGCTCTTCCCCAGTACGTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR GCA 72 bp | CTACTACCATGGACCAAGCAGATCCAGGCATTGGGATaGATAATTAGCCTAGTTCTTGTGTGCACTCCACAG | + |
Preference number: 3 (lower is better) Translates to: LLPWTKQIQALG*IISLVLVCTPQ Trigger: CTGTGGAGTGCACACAAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR CCA 72 bp | GGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATaGGAGACAAACGAGATGCCCCTCTGGAGTCATGAG | + |
Preference number: 3 (lower is better) Translates to: GVAVVTTIQDSL*ETNEMPLWSHE Trigger: CTCATGACTCCAGAGGGGCATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TTCAAAGCCTTTTCATTAACTCCAATCTTGAGAGCCTaGGCTTCTCGCTTCCTGGAGCCCACTCAGTTCACA | + |
Preference number: 3 (lower is better) Translates to: FKAFSLTPILRA*ASRFLEPTQFT Trigger: TGTGAACTGAGTGGGCTCCAGGAAGCGAGAAGCCCAGGCTCTCAAGATTGGAGTTAATGAAAAGGCTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR CCA 72 bp | AGCCTCCAGTCTCCTCAGGGTGTCTTTTCAGCCGCTTaGTTAGTTTCTCCACAAATTCCTGTGATGTCATGT | + |
Preference number: 3 (lower is better) Translates to: SLQSPQGVFSAA*LVSPQIPVMSC Trigger: ACATGACATCACAGGAATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACACCCTGAGGAGACTGGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | TCCACTTGTCTGTTTTGGACCAGGAAAGATCATCCTTaGTGCTGTCGTAGTAGCCGATCTTCTTGTAGCTGC | + |
Preference number: 3 (lower is better) Translates to: STCLFWTRKDHP*CCRSSRSSCSC Trigger: GCAGCTACAAGAAGATCGGCTACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | CATGTATTCATCTTCTTGGAGCTGCAGTGCTCCAGCTaGGGCAGAATGGAGACATCAATGTCTTCCTTTGGT | + |
Preference number: 3 (lower is better) Translates to: HVFIFLELQCSS*GRMETSMSSFG Trigger: ACCAAAGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGAATACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR-3UTR CAA 90 bp | CACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGCAGAAAAGAACATATTaGCACAGAAACACATCCAGC | + |
Preference number: 3 (lower is better) Translates to: HTPTTTVHSQVQHMQTQVQKRTY*HRNTSS Trigger: GCTGGATGTGTTTCTGTGCAAATATGTTCTTTTCTG...CACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR TCA 72 bp | CGCTTATTCCAGAACCTGGCACTCATTGTTTGCTTGTaGTTCTTCCTGTCTGATGAGGAGGAGACTCTTCAC | + |
Preference number: 3 (lower is better) Translates to: RLFQNLALIVCL*FFLSDEEETLH Trigger: GTGAAGAGTCTCCTCCTCATCAGACAGGAAGAATCACAAGCAAACAATGAGTGCCAGGTTCTGGAATAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR TCA 72 bp | CAGTCGGGACTTCTCTTCCTCATTGTTGTTGGTGGATaGTCCTGTTTTCATTGTGTCCTGTGCTTCAGACTG | + |
Preference number: 3 (lower is better) Translates to: QSGLLFLIVVGG*SCFHCVLCFRL Trigger: CAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR GCA 72 bp | GATGATCCTGTTTTCATTGTGTCCTGTGCTTCAGACTaGCATTCACCTCGAGTGATCAACCTGCGCATCTTA | + |
Preference number: 3 (lower is better) Translates to: DDPVFIVSCASD*HSPRVINLRIL Trigger: TAAGATGCGCAGGTTGATCACTCGAGGTGAATGGCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CCA 72 bp | TGCCTTCATTTGATCAAATGTGCACCCACTATCCACTaGAAACAGCCTCCAACCTGTCCCCATTTCTTTTCC | + |
Preference number: 3 (lower is better) Translates to: CLHLIKCAPTIH*KQPPTCPHFFS Trigger: GGAAAAGAAATGGGGACAGGTTGGAGGCTGTTTCCAGTGGATAGTGGGTGCACATTTGATCAAATGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR CCA 72 bp | TCTCCAACAGTCGGGACTTCTCTTCCTCATTGTTGTTaGTGGATGATCCTGTTTTCATTGTGTCCTGTGCTT | + |
Preference number: 3 (lower is better) Translates to: SPTVGTSLPHCC*WMILFSLCPVL Trigger: AAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAGAGAAGTCCCGACTGTTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 72 bp | ATGCAAGGAGGCACACAAGTAAAACATAGACAACCATaGCATATGCACATGAGGAAGACAGCTTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: MQGGTQVKHRQP*HMHMRKTAWCA Trigger: AGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGTTGTCTATGTTTTACTTGTGTGCCTCCTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
||
3UTR CCA 72 bp | AGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATaGAGAGAAAGCCCTGATAATGTAGGAAGACCCCTG | + |
Preference number: 3 (lower is better) Translates to: RRMMEGDSNAEK*RESPDNVGRPL Trigger: CAGGGGTCTTCCTACATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CAA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACAGAAAAGAACATATTaGCACAGAAACACATCCAGC | + |
Preference number: 3 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRQKRTY*HRNTSS Trigger: GCTGGATGTGTTTCTGTGCAAATATGTTCTTTTCTG...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR-3UTR CAA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATGATATAACGATCCACTaGTCTGTTTTGGACCAGGAA | + |
Preference number: 3 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDDITIH*SVLDQE Trigger: TTCCTGGTCCAAAACAGACAAGTGGATCGTTATATC...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR TCA 72 bp | AGTATACACAAGACTCAGTCTTCTTCCATCTGCCCTTaGATTATCACTGTTCTGGTCATTCTGCCCCAATTT | + |
Preference number: 3 (lower is better) Translates to: SIHKTQSSSICP*IITVLVILPQF Trigger: AAATTGGGGCAGAATGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR CCA 72 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTaGGTGCCCAGAAAAGGGAGACGTTTGCAGAAAAGA | + |
Preference number: 3 (lower is better) Translates to: HSRREEYIYTRV*VPRKGRRLQKR Trigger: TCTTTTCTGCAAACGTCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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3UTR-3UTR CAA 90 bp | CTTTGTAACCATAGAAAATGCCGAGCCATGTATTCATCTTCTTGGAGCTGCAGTCAGAAAAGAACATATTaGCACAGAAACACATCCAGC | + |
Preference number: 3 (lower is better) Translates to: LCNHRKCRAMYSSSWSCSQKRTY*HRNTSS Trigger: GCTGGATGTGTTTCTGTGCAAATATGTTCTTTTCTG...ACTGCAGCTCCAAGAAGATGAATACATGGCTCGGCATTTTCTATGGTTACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
3UTR TCA 72 bp | AAGAAAAGAAAACCAAGATGCAGTAGTTCTGAGAGATaGTTGTACAGACCCAAAGTGGGACGCATGAGAATA | + |
Preference number: 3 (lower is better) Translates to: KKRKPRCSSSER*LYRPKVGRMRI Trigger: TATTCTCATGCGTCCCACTTTGGGTCTGTACAATCATCTCTCAGAACTACTGCATCTTGGTTTTCTTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR-3UTR CAA 90 bp | ACAGTCTTAAGAGCTCAAAATAAGGACTTAGTCAAAATGAAGAACCCTGAAGCTAGAAAAGGGAGACGTTaGCAGAAAAGACAGCAAAGA | + |
Preference number: 3 (lower is better) Translates to: TVLRAQNKDLVKMKNPEARKGRR*QKRQQR Trigger: TCTTTGCTGTCTTTTCTGCAAACGTCTCCCTTTTCT...AGCTTCAGGGTTCTTCATTTTGACTAAGTCCTTATTTTGAGCTCTTAAGACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
3UTR TCA 72 bp | GCAAACACAAAAGCAATCAATTATTCCCTCAAGGAATaGTCAAGATTGTTAAAGTATACACAAGACTCAGTC | + |
Preference number: 3 (lower is better) Translates to: ANTKAINYSLKE*SRLLKYTQDSV Trigger: GACTGAGTCTTGTGTATACTTTAACAATCTTGATCATTCCTTGAGGGAATAATTGATTGCTTTTGTGTTTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
CDS-3UTR CCA 90 bp | GTTCCACATCCGGGCAGCCTCGGCTACCAGTGTGGACACAGAGCTGCAGCCGGGGGCACTTGCGCACCTTaGGCCCCACCACCTCGCGTT | + |
Preference number: 4 (lower is better) Translates to: VPHPGSLGYQCGHRAAAGGTCAP*APPPRV Trigger: AACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCC...CCCGGCTGCAGCTCTGTGTCCACACTGGTAGCCGAGGCTGCCCGGATGTGGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR CCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTCCTGGCAGTGGGGCTTaGGGGTGCTCCACTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: VKGMLPPARSVHLSMPSFPGSGA*GCSTGP Trigger: AGGGCCAGTGGAGCACCCCCAAGCCCCACTGCCAGG...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR GCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTGGCCCTGACTACAGATaGTCCGGGAGCTGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: VKGMLPPARSVHLSMPSFGPDYR*SGSCPP Trigger: TGGTGGGCAGCTCCCGGAGCATCTGTAGTCAGGGCC...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | ATCCCGCTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACCCGTCCAGGAGCCGTTaGCCAGGCACTTGCGCACCT | + |
Preference number: 4 (lower is better) Translates to: IPLCPTNPCMEQSHSSLHPSRSR*PGTCAP Trigger: AGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGG...GTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATGGAAGCCAGCCCCCGCTCATaGGAAACAGCGCCCCGATGT | + |
Preference number: 4 (lower is better) Translates to: TNRALHLIPLCPTNPCMEASPRS*ETAPRC Trigger: ACATCGGGGCGCTGTTTCCCATGAGCGGGGGCTGGC...TTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
CDS-3UTR CCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTGCCAGTGGTGCCTCCTaGAAGCCTCCAGTCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: VKGMLPPARSVHLSMPSFASGAS*KPPVSS Trigger: TGAGGAGACTGGAGGCTTCCAGGAGGCACCACTGGC...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
||
CDS-3UTR TCA 90 bp | TGTAGCTGCTCGATAAGCGTCCATGCCATCCGGGAGCCGCTGGCATCAAAGACCTACTGCACGCCGTTCTaGGTGTGGCGTTCGATTCAC | + |
Preference number: 4 (lower is better) Translates to: CSCSISVHAIREPLASKTYCTPF*VWRSIH Trigger: GTGAATCGAACGCCACACTCAGAACGGCGTGCAGTA...GGTCTTTGATGCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAGCAGCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
CDS-3UTR GCA 90 bp | CTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACCTCTCTCGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: LCPTNPCMEQSHSSLHLSRWPGT*APWAPP Trigger: TGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACG...AGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
CDS-3UTR GCA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGGTCTCAATGGTTCGGTaGAAGGGGTCCACAATCTGC | + |
Preference number: 4 (lower is better) Translates to: RSFPQETPQCERDAASRPVSMVR*KGSTIC Trigger: GCAGATTGTGGACCCCTTGCACCGAACCATTGAGAC...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
||
CDS-3UTR CCA 90 bp | TTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTGCTCAGCCACCTACTCCGGCACTTGCGCACCTTaGGCCCCACCACCTCGCGTT | + |
Preference number: 4 (lower is better) Translates to: FFLSDEEETLHICSATYSGTCAP*APPPRV Trigger: AACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCC...GGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
CDS-3UTR GCA 90 bp | CACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGAGTGGGGCTTGGGGGTaGTCCACTGGCCCTGACTAC | + |
Preference number: 4 (lower is better) Translates to: HTPTTTVHSQVQHMQTQVSGAWG*STGPDY Trigger: GTAGTCAGGGCCAGTGGAGCACCCCCAAGCCCCACT...CACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR GCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGAAGTACTTGGTGGCTTaGCCTGGGTCGCACTTGCTG | + |
Preference number: 4 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVKYLVA*PGSHLL Trigger: CAGCAAGTGCGACCCAGGGCAAGCCACCAAGTACTT...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTTCATCTTCTTGGAGCTaGAGTGCTCCAGCTGGGGCA | + |
Preference number: 4 (lower is better) Translates to: VKGMLPPARSVHLSMPSFSSSWS*SAPAGA Trigger: TGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGA...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGCCAGCTGGGGCAGAATaGAGACATCAATGTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: RSFPQETPQCERDAASRPPAGAE*RHQCLP Trigger: AGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGG...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTAAGGCTGCGTCCTGCTaGCTGGAAAGGATCATGGTG | + |
Preference number: 4 (lower is better) Translates to: VKGMLPPARSVHLSMPSFKAASC*LERIMV Trigger: CACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTT...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AACACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTACTGCACGCCGTTCTaGGTGTGGCGTTCGATTCAC | + |
Preference number: 4 (lower is better) Translates to: NTSCTPTQAHHCTHPQPLYCTPF*VWRSIH Trigger: GTGAATCGAACGCCACACTCAGAACGGCGTGCAGTA...CAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGACTCCAGGCGCACTCCTaGACGGCCACCTCCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRLQAHS*TATSSR Trigger: TCTGGAGGAGGTGGCCGTTCAGGAGTGCGCCTGGAG...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AACACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGAAGTACTTGGTGGCTTaGCCTGGGTCGCACTTGCTG | + |
Preference number: 4 (lower is better) Translates to: NTSCTPTQAHHCTHPQPLKYLVA*PGSHLL Trigger: CAGCAAGTGCGACCCAGGGCAAGCCACCAAGTACTT...CAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | CACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGGGCAAAGGCGAAGGCTaGGTCCTGCTGGCTGGAAAG | + |
Preference number: 4 (lower is better) Translates to: HTPTTTVHSQVQHMQTQVGKGEG*VLLAGK Trigger: CTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCC...CACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGTTTGTGAAGACTGTGTaGACCCACCAGATCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: RSFPQETPQCERDAASRPFVKTV*THQILV Trigger: CACCAAGATCTGGTGGGTCCACACAGTCTTCACAAA...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TGTGAAGACTGTGTGGACCCACCAGATCTTGGTGAACATAGAGCCATAGCCCAGGGGTGCCACAGCGACTaGGTGTGTCCATATCCGTCC | + |
Preference number: 4 (lower is better) Translates to: CEDCVDPPDLGEHRAIAQGCHSD*VCPYPS Trigger: GGACGGATATGGACACACCCAGTCGCTGTGGCACCC...CTGGGCTATGGCTCTATGTTCACCAAGATCTGGTGGGTCCACACAGTCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CAA 72 bp | TGTGGAGTGTGGCGGATGGATGTGTCCGAAAGAACGTaGGAAACCGCTGTCGGTTTGACAAGGCTGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: CGVWRMDVSERT*ETAVGLTRLVS Trigger: GCTCACCAGCCTTGTCAAACCGACAGCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCACACTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTCTCCAGGCGCACTCCTaGACGGCCACCTCCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSLQAHS*TATSSR Trigger: TCTGGAGGAGGTGGCCGTTCAGGAGTGCGCCTGGAG...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATGGAAATCATAGGCCAGTGGTaGCTCCTGGAAGCCTCCAGT | + |
Preference number: 4 (lower is better) Translates to: TNRALHLIPLCPTNPCMEIIGQW*LLEASS Trigger: ACTGGAGGCTTCCAGGAGGCACCACTGGCCTATGAT...TTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | CTACCATGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTGGCTCCATCCAGAGCTaGGAGGTCCCCACCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: LPWTKQIQALGCIISLVLGSIQS*EVPTRQ Trigger: CTGACGGGTGGGGACCTCCCAGCTCTGGATGGAGCC...AAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | AGAATGACATGTATTTCTAAGAGGGGGATTGGAGCTTGTTCTCCACCCTCTTCCGCCAGCCCCCGCTCATaGGAAACAGCGCCCCGATGT | + |
Preference number: 4 (lower is better) Translates to: RMTCISKRGIGACSPPSSASPRS*ETAPRC Trigger: ACATCGGGGCGCTGTTTCCCATGAGCGGGGGCTGGC...GGAAGAGGGTGGAGAACAAGCTCCAATCCCCCTCTTAGAAATACATGTCATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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CDS-3UTR CCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTGCCAGCCCCCGCTCATaGGAAACAGCGCCCCGATGT | + |
Preference number: 4 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSASPRS*ETAPRC Trigger: ACATCGGGGCGCTGTTTCCCATGAGCGGGGGCTGGC...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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CDS-3UTR CCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGACCTCGGCTACCAGTGTaGACACAGAGCTGCAGCCGG | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRPRLPV*TQSCSR Trigger: CCGGCTGCAGCTCTGTGTCCACACTGGTAGCCGAGG...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGACAAGGCTGGTGAGCTaGAGCCATATGAGAGCACAA | + |
Preference number: 4 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVTRLVS*SHMRAQ Trigger: TTGTGCTCTCATATGGCTCCAGCTCACCAGCCTTGT...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | CTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACCTCTCTACCCGGGTGGGATTGTaGAGTGTGGCGGATGGATGT | + |
Preference number: 4 (lower is better) Translates to: LCPTNPCMEQSHSSLHLSTRVGL*SVADGC Trigger: ACATCCATCCGCCACACTCCACAATCCCACCCGGGT...AGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | CCAATACTCAGAAGGCTGAGACAGGAAGCCTGCCCTGACACGAGTCAGGGCAACACCTCGGTAGTCTGCTaGATGGTGGCAATCTTCTTC | + |
Preference number: 4 (lower is better) Translates to: PILRRLRQEACPDTSQGNTSVVC*MVAIFF Trigger: GAAGAAGATTGCCACCATCCAGCAGACTACCGAGGT...GTTGCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAGCCTTCTGAGTATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGAATGACATGTATTTCTAAGAGGGGGATTGGAGCTTGTTCTCCACCCTCTTCCGTGCTCCACTGGCCCTaGCTACAGATGCTCCGGGAG | + |
Preference number: 4 (lower is better) Translates to: RMTCISKRGIGACSPPSSVLHWP*LQMLRE Trigger: CTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCAC...GGAAGAGGGTGGAGAACAAGCTCCAATCCCCCTCTTAGAAATACATGTCATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR TCA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATGGAATCTCCTCCTTCTTTGTaGAGACTGTGTGGACCCACC | + |
Preference number: 4 (lower is better) Translates to: TNRALHLIPLCPTNPCMESPPSL*RLCGPT Trigger: GGTGGGTCCACACAGTCTTCACAAAGAAGGAGGAGA...TTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR TCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCTGCCGAGACTGGAGCTaGTGGCGCAGTTCAGAGACA | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTICRDWS*WRSSET Trigger: TGTCTCTGAACTGCGCCATCAGCTCCAGTCTCGGCA...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTGTGTGCGAGCTGCCCACCAGATaGAAGTCGGGGTCACATCGG | + |
Preference number: 4 (lower is better) Translates to: WTKQIQALGCIISLVLVCELPTR*KSGSHR Trigger: CCGATGTGACCCCGACTTCCATCTGGTGGGCAGCTC...GCACACAAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | TACACAAGACTCAGTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCACCTGGCAGTGGGGCTTaGGGGTGCTCCACTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: YTRLSLLPSALELSLFWSPGSGA*GCSTGP Trigger: AGGGCCAGTGGAGCACCCCCAAGCCCCACTGCCAGG...TGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGCCTGGCAGTGGGGCTTaGGGGTGCTCCACTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKREPGSGA*GCSTGP Trigger: AGGGCCAGTGGAGCACCCCCAAGCCCCACTGCCAGG...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | CTACCATGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTGGCGTTCGATTCACCTaGCAGTGGGGCTTGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: LPWTKQIQALGCIISLVLGVRFT*QWGLGV Trigger: CACCCCCAAGCCCCACTGCCAGGTGAATCGAACGCC...AAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCACCCGGGTGGGATTGTaGAGTGTGGCGGATGGATGT | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTITRVGL*SVADGC Trigger: ACATCCATCCGCCACACTCCACAATCCCACCCGGGT...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCAGAGTTTCACCCGGGTaGGATTGTGGAGTGTGGCGG | + |
Preference number: 4 (lower is better) Translates to: SSQDAQSSLENGFQVLRRRVSPG*DCGVWR Trigger: CCGCCACACTCCACAATCCCACCCGGGTGAAACTCT...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAGCCAGTGGTGCCTCCTaGAAGCCTCCAGTCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRASGAS*KPPVSS Trigger: TGAGGAGACTGGAGGCTTCCAGGAGGCACCACTGGC...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGTTTGTGAAGACTGTGTaGACCCACCAGATCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVFVKTV*THQILV Trigger: CACCAAGATCTGGTGGGTCCACACAGTCTTCACAAA...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGCCCTCACCCTGGCAGTaGGGCTTGGGGGTGCTCCAC | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKREPSPWQ*GLGVLH Trigger: GTGGAGCACCCCCAAGCCCCACTGCCAGGGTGAGGG...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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3UTR CAA 72 bp | CTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTaGATCAAATGTGCACCCACTATCCACTGGAAACAG | + |
Preference number: 4 (lower is better) Translates to: LPPGQSICPCLH*IKCAPTIHWKQ Trigger: CTGTTTCCAGTGGATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGATCAAGCCACGGTACCTaGTGCCACCTTCCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRSSHGT*CHLPRA Trigger: CGCCCTGGGAAGGTGGCATCAGGTACCGTGGCTTGA...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR TCA 90 bp | GTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCATTCTGCCCCAATTTCAAGCCACGGTACCTaGTGCCACCTTCCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: VFFHLPLNYHCSGHSAPISSHGT*CHLPRA Trigger: CGCCCTGGGAAGGTGGCATCAGGTACCGTGGCTTGA...AATTGGGGCAGAATGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR TCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGTCAAGCCACGGTACCTaGTGCCACCTTCCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRSSHGT*CHLPRA Trigger: CGCCCTGGGAAGGTGGCATCAGGTACCGTGGCTTGA...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCCACAGGCAGGAAATTaGTGGCCTTCACCTGGTCGC | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKPQAGN*WPSPGR Trigger: GCGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | AACACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGCAGCATACCACCCGATaGGAAACCAGACATACTTCT | + |
Preference number: 4 (lower is better) Translates to: NTSCTPTQAHHCTHPQPLQHTTR*ETRHTS Trigger: AGAAGTATGTCTGGTTTCTCATCGGGTGGTATGCTG...CAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGGATAAAGAGTTTCTGTaGCAGGAAACGGAATGTCTT | + |
Preference number: 4 (lower is better) Translates to: RSFPQETPQCERDAASRPDKEFL*QETECL Trigger: AAGACATTCCGTTTCCTGTCACAGAAACTCTTTATC...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGACGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: SRREEYIYTRVWVPRKGRRWPGT*APWAPP Trigger: TGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACG...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR GCA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATCGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDRWPGT*APWAPP Trigger: TGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACG...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR GCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCATAGGCCAGTGGTaGCTCCTGGAAGCCTCCAGT | + |
Preference number: 4 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCIIGQW*LLEASS Trigger: ACTGGAGGCTTCCAGGAGGCACCACTGGCCTATGAT...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATGCCCTCGATAAGCGTCCATaGCATCCGGGAGCCGCTGGC | + |
Preference number: 4 (lower is better) Translates to: SCCSNNYTRQPMGDKRDALDKRP*HPGAAG Trigger: GCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAG...GGCATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACTCGATAAGCGTCCATaGCATCCGGGAGCCGCTGGC | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRLDKRP*HPGAAG Trigger: GCCAGCGGCTCCCGGATGGCATGGACGCTTATCGAG...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCACTGCCGCCCTGTAGCTaGTCGATAAGCGTCCATGCC | + |
Preference number: 4 (lower is better) Translates to: TMTYAHEEDSLVCSTHHALPPCS*SISVHA Trigger: GGCATGGACGCTTATCGAGCAGCTACAGGGCGGCAG...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGGGCACTTGCGCACCTTaGGCCCCACCACCTCGCGTT | + |
Preference number: 4 (lower is better) Translates to: HSRREEYIYTRVWVPRKGGTCAP*APPPRV Trigger: AACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCC...CCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGCCGTCCAGGAGCCGTTaGCCAGGCACTTGCGCACCT | + |
Preference number: 4 (lower is better) Translates to: HSRREEYIYTRVWVPRKGPSRSR*PGTCAP Trigger: AGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGG...CCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
CDS-3UTR CCA 90 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGGGCTCCATCCAGAGCTaGGAGGTCCCCACCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: HSRREEYIYTRVWVPRKGGSIQS*EVPTRQ Trigger: CTGACGGGTGGGGACCTCCCAGCTCTGGATGGAGCC...CCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCCTCGGCTACCAGTGTaGACACAGAGCTGCAGCCGG | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRPRLPV*TQSCSR Trigger: CCGGCTGCAGCTCTGTGTCCACACTGGTAGCCGAGG...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAAGCATCATAGGCCAGTaGTGCCTCCTGGAAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRSIIGQ*CLLEAS Trigger: GGAGGCTTCCAGGAGGCACCACTGGCCTATGATGCT...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGGCTGCGTCCTGCTaGCTGGAAAGGATCATGGTG | + |
Preference number: 4 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCKAASC*LERIMV Trigger: CACCATGATCCTTTCCAGCCAGCAGGACGCAGCCTT...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
||
CDS-3UTR CCA 90 bp | TTTCCGGGCTTCGGTCTCATAGAAAAGTCCCACGATGATTCGAGCATCTTGACGTGGCGTTCGATTCACTaGCAGCAGGAAAGACGGGGA | + |
Preference number: 4 (lower is better) Translates to: FPGFGLIEKSHDDSSILTWRSIH*QQERRG Trigger: TCCCCGTCTTTCCTGCTGCCAGTGAATCGAACGCCA...CGTCAAGATGCTCGAATCATCGTGGGACTTTTCTATGAGACCGAAGCCCGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGTCAAGCCACGGTACCTaGTGCCACCTTCCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKRESSHGT*CHLPRA Trigger: CGCCCTGGGAAGGTGGCATCAGGTACCGTGGCTTGA...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
CDS-3UTR TCA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGAGTGCTCCACTGGCCCTaGCTACAGATGCTCCGGGAG | + |
Preference number: 4 (lower is better) Translates to: SRREEYIYTRVWVPRKGRVLHWP*LQMLRE Trigger: CTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCAC...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR TCA 90 bp | CATTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGGTGCTCCACTGGCCCTaGCTACAGATGCTCCGGGAG | + |
Preference number: 4 (lower is better) Translates to: HSRREEYIYTRVWVPRKGVLHWP*LQMLRE Trigger: CTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCAC...CCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
||
CDS-3UTR GCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGAGTGGGGCTTGGGGGTaGTCCACTGGCCCTGACTAC | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKRESGAWG*STGPDY Trigger: GTAGTCAGGGCCAGTGGAGCACCCCCAAGCCCCACT...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR GCA 90 bp | TACACAAGACTCAGTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCAAGTGGGGCTTGGGGGTaGTCCACTGGCCCTGACTAC | + |
Preference number: 4 (lower is better) Translates to: YTRLSLLPSALELSLFWSSGAWG*STGPDY Trigger: GTAGTCAGGGCCAGTGGAGCACCCCCAAGCCCCACT...TGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR GCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCGTCTCAATGGTTCGGTaGAAGGGGTCCACAATCTGC | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTIVSMVR*KGSTIC Trigger: GCAGATTGTGGACCCCTTGCACCGAACCATTGAGAC...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTGGCAAAGGCGAAGGCTaGGTCCTGCTGGCTGGAAAG | + |
Preference number: 4 (lower is better) Translates to: RRRMMEGDSNAEKWRESPGKGEG*VLLAGK Trigger: CTTTCCAGCCAGCAGGACGCAGCCTTCGCCTTTGCC...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGAGGCACCCTCATCAGCTaGAGGCAGGCAGCTGTTCCC | + |
Preference number: 4 (lower is better) Translates to: SRREEYIYTRVWVPRKGRGTLIS*RQAAVP Trigger: GGGAACAGCTGCCTGCCTGCAGCTGATGAGGGTGCC...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGGGCACCCTCATCAGCTaGAGGCAGGCAGCTGTTCCC | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKREGTLIS*RQAAVP Trigger: GGGAACAGCTGCCTGCCTGCAGCTGATGAGGGTGCC...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGATTCGGACACAGCGACTaGGTGTGTCCATATCCGTCC | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRFGHSD*VCPYPS Trigger: GGACGGATATGGACACACCCAGTCGCTGTGTCCGAA...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | ATCCCGCTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACGGGTCAAATAAGACTTaGAGCAGATTCGGACACAGC | + |
Preference number: 4 (lower is better) Translates to: IPLCPTNPCMEQSHSSLHGSNKT*SRFGHS Trigger: GCTGTGTCCGAATCTGCTCCAAGTCTTATTTGACCC...GTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGCACTTGCTGTCGTaGTGGATAAGCTTGAGCTCG | + |
Preference number: 4 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCSHLLS*WISLSS Trigger: CGAGCTCAAGCTTATCCACCACGACAGCAAGTGCGA...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTAGAGTTTCACCCGGGTaGGATTGTGGAGTGTGGCGG | + |
Preference number: 4 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSRVSPG*DCGVWR Trigger: CCGCCACACTCCACAATCCCACCCGGGTGAAACTCT...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AACATATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGATCTCCGTGGTGATATaGCCCTCCACCGCCTCAGTC | + |
Preference number: 4 (lower is better) Translates to: NIFAQKHIQLPRRGEDMVISVVI*PSTASV Trigger: GACTGAGGCGGTGGAGGGCCATATCACCACGGAGAT...CACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | ATCCCGCTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACAGGAAAGATCATCCTTaGTGCTGTCGTAGTAGCCGA | + |
Preference number: 4 (lower is better) Translates to: IPLCPTNPCMEQSHSSLHRKDHP*CCRSSR Trigger: TCGGCTACTACGACAGCACCAAGGATGATCTTTCCT...GTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAGCGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCGAACAATGCCCAGGCTaGAGAGAACTGAGACGGAGA | + |
Preference number: 4 (lower is better) Translates to: SSQDAQSSLENGFQVLRREQCPG*RELRRR Trigger: TCTCCGTCTCAGTTCTCTCCAGCCTGGGCATTGTTC...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATACTGCAGTGCTCCAGCTaGGGCAGAATGGAGACATCA | + |
Preference number: 4 (lower is better) Translates to: TPTTTVHSQVQHMQTQVILQCSS*GRMETS Trigger: TGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAG...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTGCTCAGCCACCTACTCCATGCCCACGGCCCTGTaGTCATTGATCTTTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: FFLSDEEETLHICSATYSMPTAL*SLIFSV Trigger: CACTGAAAAGATCAATGACCACAGGGCCGTGGGCAT...GGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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3UTR CAA 72 bp | ACGTACTGGGGAAGAGCCTGCTTAATCATGTGCATGTaGGGTGCACATGCCTCTGCTGAAAGAAGACAGGAC | + |
Preference number: 4 (lower is better) Translates to: TYWGRACLIMCM*GAHASAERRQD Trigger: GTCCTGTCTTCTTTCAGCAGAGGCATGTGCACCCAACATGCACATGATTAAGCAGGCTCTTCCCCAGTACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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3UTR CAA 72 bp | CCTCTCTGCTTCAAAGCCTTTTCATTAACTCCAATCTaGAGAGCCTGGGCTTCTCGCTTCCTGGAGCCCACT | + |
Preference number: 4 (lower is better) Translates to: PLCFKAFSLTPI*RAWASRFLEPT Trigger: AGTGGGCTCCAGGAAGCGAGAAGCCCAGGCTCTCAAGATTGGAGTTAATGAAAAGGCTTTGAAGCAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR TCA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATACGGCCCTGTGGTCATTaGTCTTTTCAGTGGACACAC | + |
Preference number: 4 (lower is better) Translates to: TPTTTVHSQVQHMQTQVIRPCGH*SFQWTH Trigger: GTGTGTCCACTGAAAAGATCAATGACCACAGGGCCG...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCGGCCCTGTGGTCATTaGTCTTTTCAGTGGACACAC | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKRPCGH*SFQWTH Trigger: GTGTGTCCACTGAAAAGATCAATGACCACAGGGCCG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGATGCCGAGACTGGAGCTaGTGGCGCAGTTCAGAGACA | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRCRDWS*WRSSET Trigger: TGTCTCTGAACTGCGCCATCAGCTCCAGTCTCGGCA...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AACATATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGGAGTCAGGATATCCATaGCCACCAGCAGGCCTACAG | + |
Preference number: 4 (lower is better) Translates to: NIFAQKHIQLPRRGEDMVESGYP*PPAGLQ Trigger: CTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTC...CACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAGTATACACAAGACTCAGTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGCTCCATCCAGAGCTaGGAGGTCCCCACCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: KYTQDSVFFHLPLNYHCSGSIQS*EVPTRQ Trigger: CTGACGGGTGGGGACCTCCCAGCTCTGGATGGAGCC...AGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTATCTCCGTGGTGATATaGCCCTCCACCGCCTCAGTC | + |
Preference number: 4 (lower is better) Translates to: RRRMMEGDSNAEKWRESPISVVI*PSTASV Trigger: GACTGAGGCGGTGGAGGGCCATATCACCACGGAGAT...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTAGCATCATAGGCCAGTaGTGCCTCCTGGAAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: RRRMMEGDSNAEKWRESPSIIGQ*CLLEAS Trigger: GGAGGCTTCCAGGAGGCACCACTGGCCTATGATGCT...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TATTTACAGCAATTCCATTATAGAGTGAATAGCAAAGGACCAGTCCTAGAAGAGCCCTCACCCTGGCAGTaGGGCTTGGGGGTGCTCCAC | + |
Preference number: 4 (lower is better) Translates to: YLQQFHYRVNSKGPVLEEPSPWQ*GLGVLH Trigger: GTGGAGCACCCCCAAGCCCCACTGCCAGGGTGAGGG...CTCTTCTAGGACTGGTCCTTTGCTATTCACTCTATAATGGAATTGCTGTAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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3UTR CAA 72 bp | CCAGCTGGGGCAGAATGGAGACATCAATGTCTTCCTTaGGTTCCTCCTTGGCAAAAGTCTCAATGGTTCGGT | + |
Preference number: 4 (lower is better) Translates to: PAGAEWRHQCLP*VPPWQKSQWFG Trigger: ACCGAACCATTGAGACTTTTGCCAAGGAGGAACCAAAGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | TTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTGCTCAGCCACCTACTCCAACTCTGTCGAAAAGTaGTCTCAATCCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: FFLSDEEETLHICSATYSNSVEK*SQSQPL Trigger: AAGAGGCTGGGATTGAGATCACTTTTCGACAGAGTT...GGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR TCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCAGAAAAGTCCCACGATaGTTCGAGCATCTTGACGCT | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTIRKVPR*FEHLDA Trigger: AGCGTCAAGATGCTCGAATCATCGTGGGACTTTTCT...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCCAGGCTGGAGAGAACTaGGACGGAGATAAAGAGTTT | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTIQAGEN*DGDKEF Trigger: AAACTCTTTATCTCCGTCTCAGTTCTCTCCAGCCTG...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | TATTTACAGCAATTCCATTATAGAGTGAATAGCAAAGGACCAGTCCTAGAAGAGCGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCA | + |
Preference number: 4 (lower is better) Translates to: YLQQFHYRVNSKGPVLEERWPGT*APWAPP Trigger: TGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACG...CTCTTCTAGGACTGGTCCTTTGCTATTCACTCTATAATGGAATTGCTGTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR GCA 90 bp | AGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTGATAATCTGCCGCCCTGTAGCTaGTCGATAAGCGTCCATGCC | + |
Preference number: 4 (lower is better) Translates to: RMMEGDSNAEKWRESPDNLPPCS*SISVHA Trigger: GGCATGGACGCTTATCGAGCAGCTACAGGGCGGCAG...ATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATGCCTCATCTTCTTGGAGCTaGAGTGCTCCAGCTGGGGCA | + |
Preference number: 4 (lower is better) Translates to: SCCSNNYTRQPMGDKRDASSSWS*SAPAGA Trigger: TGCCCCAGCTGGAGCACTGCAGCTCCAAGAAGATGA...GGCATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | CTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACCTCTCTTTTCATTGTGTCCTGTaGTTCAGACTGCCATTCACC | + |
Preference number: 4 (lower is better) Translates to: LCPTNPCMEQSHSSLHLSFHCVL*FRLPFT Trigger: GGTGAATGGCAGTCTGAAGCACAGGACACAATGAAA...AGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
CDS-3UTR CCA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATAACAAGGCTGGTGAGCTaGAGCCATATGAGAGCACAA | + |
Preference number: 4 (lower is better) Translates to: TPTTTVHSQVQHMQTQVITRLVS*SHMRAQ Trigger: TTGTGCTCTCATATGGCTCCAGCTCACCAGCCTTGT...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCCAGCTGGGGCAGAATaGAGACATCAATGTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKPAGAE*RHQCLP Trigger: AGGAAGACATTGATGTCTCCATTCTGCCCCAGCTGG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACTGCAGTGCTCCAGCTaGGGCAGAATGGAGACATCA | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRLQCSS*GRMETS Trigger: TGATGTCTCCATTCTGCCCCAGCTGGAGCACTGCAG...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR CAA 72 bp | CAGAGGCTACTACCATGGACCAAGCAGATCCAGGCATaGGGATGCATAATTAGCCTAGTTCTTGTGTGCACT | + |
Preference number: 4 (lower is better) Translates to: QRLLPWTKQIQA*GCIISLVLVCT Trigger: AGTGCACACAAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCATGGTAGTAGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
||
3UTR CAA 72 bp | AAGCCTCCAGTCTCCTCAGGGTGTCTTTTCAGCCGCTaGGTTAGTTTCTCCACAAATTCCTGTGATGTCATG | + |
Preference number: 4 (lower is better) Translates to: KPPVSSGCLFSR*VSFSTNSCDVM Trigger: CATGACATCACAGGAATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACACCCTGAGGAGACTGGAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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3UTR CAA 72 bp | AGAATGGAGACATCAATGTCTTCCTTTGGTTCCTCCTaGGCAAAAGTCTCAATGGTTCGGTGCAAGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: RMETSMSSFGSS*AKVSMVRCKGS Trigger: GGACCCCTTGCACCGAACCATTGAGACTTTTGCCAAGGAGGAACCAAAGGAAGACATTGATGTCTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
||
CDS-3UTR TCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACTCTGTCGAAAAGTaGTCTCAATCCCAGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCNSVEK*SQSQPL Trigger: AAGAGGCTGGGATTGAGATCACTTTTCGACAGAGTT...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGAGGCACAGCTGGATCTaGGAAGAAACTCTGTCGAAA | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKRHSWI*EETLSK Trigger: TTTCGACAGAGTTTCTTCTCAGATCCAGCTGTGCCT...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCAGGCTGGAGAGAACTaGGACGGAGATAAAGAGTTT | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKQAGEN*DGDKEF Trigger: AAACTCTTTATCTCCGTCTCAGTTCTCTCCAGCCTG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTTCTCCTCCTTCTTTGTaGAGACTGTGTGGACCCACC | + |
Preference number: 4 (lower is better) Translates to: RRRMMEGDSNAEKWRESPSPPSL*RLCGPT Trigger: GGTGGGTCCACACAGTCTTCACAAAGAAGGAGGAGA...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGATTGTTGTTGGTGGATaGTCCTGTTTTCATTGTGTC | + |
Preference number: 4 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVIVVGG*SCFHCV Trigger: GACACAATGAAAACAGGATCATCCACCAACAACAAT...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATAATGTCATGTTGGAAATaGTTCGGGTGTTGGCAGGGT | + |
Preference number: 4 (lower is better) Translates to: TPTTTVHSQVQHMQTQVIMSCWK*FGCWQG Trigger: ACCCTGCCAACACCCGAAGCATTTCCAACATGACAT...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCAAAGATCATCCTTGGTaGTGTCGTAGTAGCCGATCT | + |
Preference number: 4 (lower is better) Translates to: SSQDAQSSLENGFQVLRRKDHPW*CRSSRS Trigger: AGATCGGCTACTACGACAGCACCAAGGATGATCTTT...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR GCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCTTTCATTGTGTCCTGTaGTTCAGACTGCCATTCACC | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTIFHCVL*FRLPFT Trigger: GGTGAATGGCAGTCTGAAGCACAGGACACAATGAAA...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TACACAAGACTCAGTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCATTCGGACACAGCGACTaGGTGTGTCCATATCCGTCC | + |
Preference number: 4 (lower is better) Translates to: YTRLSLLPSALELSLFWSFGHSD*VCPYPS Trigger: GGACGGATATGGACACACCCAGTCGCTGTGTCCGAA...TGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGATCGCACTTGCTGTCGTaGTGGATAAGCTTGAGCTCG | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRSHLLS*WISLSS Trigger: CGAGCTCAAGCTTATCCACCACGACAGCAAGTGCGA...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGGAACAATGCCCAGGCTaGAGAGAACTGAGACGGAGA | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRREQCPG*RELRRR Trigger: TCTCCGTCTCAGTTCTCTCCAGCCTGGGCATTGTTC...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCATGTATTCATCTTCTTaGAGCTGCAGTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: SSQDAQSSLENGFQVLRRMYSSS*SCSAPA Trigger: AGCTGGAGCACTGCAGCTCCAAGAAGATGAATACAT...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CCA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGCCTCATTGTTGTTGGTaGATGATCCTGTTTTCATTG | + |
Preference number: 4 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVPHCCW*MILFSL Trigger: CAATGAAAACAGGATCATCCACCAACAACAATGAGG...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AACATATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGAGAAAAGTCCCACGATaGTTCGAGCATCTTGACGCT | + |
Preference number: 4 (lower is better) Translates to: NIFAQKHIQLPRRGEDMVRKVPR*FEHLDA Trigger: AGCGTCAAGATGCTCGAATCATCGTGGGACTTTTCT...CACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AACATATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGCAGCATACCACCCGATaGGAAACCAGACATACTTCT | + |
Preference number: 4 (lower is better) Translates to: NIFAQKHIQLPRRGEDMVQHTTR*ETRHTS Trigger: AGAAGTATGTCTGGTTTCTCATCGGGTGGTATGCTG...CACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCAACGGGTCATAGGTTTTaGACCAGTTGTCAGCATACC | + |
Preference number: 4 (lower is better) Translates to: TMTYAHEEDSLVCSTHHATGHRF*TSCQHT Trigger: GGTATGCTGACAACTGGTTCAAAACCTATGACCCGT...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGAAAGATCATCCTTGGTaGTGTCGTAGTAGCCGATCT | + |
Preference number: 4 (lower is better) Translates to: CVCVCVCVVSPLEEATFKKDHPW*CRSSRS Trigger: AGATCGGCTACTACGACAGCACCAAGGATGATCTTT...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTGATAATGAGTCAGGATATCCATaGCCACCAGCAGGCCTACAG | + |
Preference number: 4 (lower is better) Translates to: RMMEGDSNAEKWRESPDNESGYP*PPAGLQ Trigger: CTGTAGGCCTGCTGGTGGGCATGGATATCCTGACTC...ATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TATTTACAGCAATTCCATTATAGAGTGAATAGCAAAGGACCAGTCCTAGAAGAGGAGCTGCCCACCAGATaGAAGTCGGGGTCACATCGG | + |
Preference number: 4 (lower is better) Translates to: YLQQFHYRVNSKGPVLEEELPTR*KSGSHR Trigger: CCGATGTGACCCCGACTTCCATCTGGTGGGCAGCTC...CTCTTCTAGGACTGGTCCTTTGCTATTCACTCTATAATGGAATTGCTGTAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCTCCACTTGTCTGTTTTaGACCAGGAAAGATCATCCT | + |
Preference number: 4 (lower is better) Translates to: PGQSICPCLHLIKCAPTISTCLF*TRKDHP Trigger: AGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGA...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGATCAGATTGTTCAGGTTaGGCTGGGAGTTCTGGATAT | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRSDCSG*AGSSGY Trigger: ATATCCAGAACTCCCAGCCCAACCTGAACAATCTGA...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGATGCCCACGGCCCTGTaGTCATTGATCTTTTCAGTG | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRMPTAL*SLIFSV Trigger: CACTGAAAAGATCAATGACCACAGGGCCGTGGGCAT...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR CAA 72 bp | CTTCCTCATTGTTGTTGGTGGATGATCCTGTTTTCATaGTGTCCTGTGCTTCAGACTGCCATTCACCTCGAG | + |
Preference number: 4 (lower is better) Translates to: LPHCCWWMILFS*CPVLQTAIHLE Trigger: CTCGAGGTGAATGGCAGTCTGAAGCACAGGACACAATGAAAACAGGATCATCCACCAACAACAATGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGACGGGTCATAGGTTTTaGACCAGTTGTCAGCATACC | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRTGHRF*TSCQHT Trigger: GGTATGCTGACAACTGGTTCAAAACCTATGACCCGT...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTGTTGTTGGTGGATaGTCCTGTTTTCATTGTGTC | + |
Preference number: 4 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCIVVGG*SCFHCV Trigger: GACACAATGAAAACAGGATCATCCACCAACAACAAT...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR GCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGATGTCATGTTGGAAATaGTTCGGGTGTTGGCAGGGT | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRMSCWK*FGCWQG Trigger: ACCCTGCCAACACCCGAAGCATTTCCAACATGACAT...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCATTCTGCCCCAATTGGGTCAAATAAGACTTaGAGCAGATTCGGACACAGC | + |
Preference number: 4 (lower is better) Translates to: VFFHLPLNYHCSGHSAPIGSNKT*SRFGHS Trigger: GCTGTGTCCGAATCTGCTCCAAGTCTTATTTGACCC...AATTGGGGCAGAATGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | AGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATGCCCCTGTGATGTCATGTTaGAAATGCTTCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: SCCSNNYTRQPMGDKRDAPVMSC*KCFGCW Trigger: CCAACACCCGAAGCATTTCCAACATGACATCACAGG...GGCATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCCTGTGATGTCATGTTaGAAATGCTTCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRPVMSC*KCFGCW Trigger: CCAACACCCGAAGCATTTCCAACATGACATCACAGG...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGAGGAAAGATCATCCTTaGTGCTGTCGTAGTAGCCGA | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRRKDHP*CCRSSR Trigger: TCGGCTACTACGACAGCACCAAGGATGATCTTTCCT...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTTCAGATTGTTCAGGTTaGGCTGGGAGTTCTGGATAT | + |
Preference number: 4 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSSDCSG*AGSSGY Trigger: ATATCCAGAACTCCCAGCCCAACCTGAACAATCTGA...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCACCTTTGGTTCCTCCTTaGCAAAAGTCTCAATGGTTC | + |
Preference number: 4 (lower is better) Translates to: TMTYAHEEDSLVCSTHHAPLVPP*QKSQWF Trigger: GAACCATTGAGACTTTTGCCAAGGAGGAACCAAAGG...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR CAA 72 bp | TTGGTTAGTTTCTCCACAAATTCCTGTGATGTCATGTaGGAAATGCTTCGGGTGTTGGCAGGGTTCAGCATG | + |
Preference number: 4 (lower is better) Translates to: LVSFSTNSCDVM*EMLRVLAGFSM Trigger: CATGCTGAACCCTGCCAACACCCGAAGCATTTCCAACATGACATCACAGGAATTTGTGGAGAAACTAACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR TCA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAATGATTCGAGCATCTTaGCGCTTCAGGTTTTTAACA | + |
Preference number: 4 (lower is better) Translates to: DRTSARQTTVIPILRRLRMIRAS*RFRFLT Trigger: TGTTAAAAACCTGAAGCGTCAAGATGCTCGAATCAT...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | TATTTACAGCAATTCCATTATAGAGTGAATAGCAAAGGACCAGTCCTAGAAGAGTTCGGACACAGCGACTaGGTGTGTCCATATCCGTCC | + |
Preference number: 4 (lower is better) Translates to: YLQQFHYRVNSKGPVLEEFGHSD*VCPYPS Trigger: GGACGGATATGGACACACCCAGTCGCTGTGTCCGAA...CTCTTCTAGGACTGGTCCTTTGCTATTCACTCTATAATGGAATTGCTGTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGGGGTCAAATAAGACTTaGAGCAGATTCGGACACAGC | + |
Preference number: 4 (lower is better) Translates to: FQERRVYIYKSLGAQKREGSNKT*SRFGHS Trigger: GCTGTGTCCGAATCTGCTCCAAGTCTTATTTGACCC...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CCA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTTCCACTTGTCTGTTTTaGACCAGGAAAGATCATCCT | + |
Preference number: 4 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSSTCLF*TRKDHP Trigger: AGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGA...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCCTTTGGTTCCTCCTTaGCAAAAGTCTCAATGGTTC | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRPLVPP*QKSQWF Trigger: GAACCATTGAGACTTTTGCCAAGGAGGAACCAAAGG...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGAATGTATTCATCTTCTTaGAGCTGCAGTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRMYSSS*SCSAPA Trigger: AGCTGGAGCACTGCAGCTCCAAGAAGATGAATACAT...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGAATGACATGTATTTCTAAGAGGGGGATTGGAGCTTGTTCTCCACCCTCTTCCATGATTCGAGCATCTTaGCGCTTCAGGTTTTTAACA | + |
Preference number: 4 (lower is better) Translates to: RMTCISKRGIGACSPPSSMIRAS*RFRFLT Trigger: TGTTAAAAACCTGAAGCGTCAAGATGCTCGAATCAT...GGAAGAGGGTGGAGAACAAGCTCCAATCCCCCTCTTAGAAATACATGTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR TCA 90 bp | AGAATGACATGTATTTCTAAGAGGGGGATTGGAGCTTGTTCTCCACCCTCTTCCGATAAAGAGTTTCTGTaGCAGGAAACGGAATGTCTT | + |
Preference number: 4 (lower is better) Translates to: RMTCISKRGIGACSPPSSDKEFL*QETECL Trigger: AAGACATTCCGTTTCCTGTCACAGAAACTCTTTATC...GGAAGAGGGTGGAGAACAAGCTCCAATCCCCCTCTTAGAAATACATGTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGAATGACATGTATTTCTAAGAGGGGGATTGGAGCTTGTTCTCCACCCTCTTCCGTCTTTTCAGCCGCTTaGTTAGTTTCTCCACAAATT | + |
Preference number: 4 (lower is better) Translates to: RMTCISKRGIGACSPPSSVFSAA*LVSPQI Trigger: AATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGAC...GGAAGAGGGTGGAGAACAAGCTCCAATCCCCCTCTTAGAAATACATGTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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3UTR CAA 72 bp | AACACAAGTGATAGCAGCATTCAGAAAAGAACATATTaGCACAGAAACACATCCAGCTGCCTAGGAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: NTSDSSIQKRTY*HRNTSSCLGEE Trigger: CTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTTCTTTTCTGAATGCTGCTATCACTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 ENSMUST00000173823.8 |
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CDS-3UTR CCA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGGTCTTTTCAGCCGCTTaGTTAGTTTCTCCACAAATT | + |
Preference number: 4 (lower is better) Translates to: KEDRTSARQTTVIPILRRVFSAA*LVSPQI Trigger: AATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGAC...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AGTCACACTGTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACCTCATTGTTGTTGGTaGATGATCCTGTTTTCATTG | + |
Preference number: 4 (lower is better) Translates to: SHTVNCFIEIQGDPSPKRPHCCW*MILFSL Trigger: CAATGAAAACAGGATCATCCACCAACAACAATGAGG...TCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAACAGTGTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CCA 90 bp | AAGTATACACAAGACTCAGTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTTCTGAGGCAGGTGGGTaGTGTAAAGATAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: KYTQDSVFFHLPLNYHCSSEAGG*CKDRFH Trigger: GTGAAACCTATCTTTACACCACCCACCTGCCTCAGA...AGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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3UTR CAA 72 bp | AAGTATACACAAGACTCAGTCTTCTTCCATCTGCCCTaGAATTATCACTGTTCTGGTCATTCTGCCCCAATT | + |
Preference number: 4 (lower is better) Translates to: KYTQDSVFFHLP*NYHCSGHSAPI Trigger: AATTGGGGCAGAATGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGACTGAGTCTTGTGTATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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3UTR CAA 72 bp | TCATTCCAGGAGAGAAGAGTATATATATACAAGAGTTaGGGTGCCCAGAAAAGGGAGACGTTTGCAGAAAAG | + |
Preference number: 4 (lower is better) Translates to: SFQERRVYIYKS*GAQKRETFAEK Trigger: CTTTTCTGCAAACGTCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS CCA 90 bp | GGGTGCCACAGCGACTGGGTGTGTCCATATCCGTCCAGGAGCCGTTaGCCAGGCACTTGCGCACCTTGGGCCCCACCACCTCGCGTTCGC | + |
Preference number: 5 (lower is better) Translates to: GCHSDWVCPYPSRSR*PGTCAPWAPPPRVR Trigger: GCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCTGTGGCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS GCA 90 bp | GACTGGGTGTGTCCATATCCGTCCAGGAGCCGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCACCTCGCGTTCGCCCCGGCACACAT | + |
Preference number: 5 (lower is better) Translates to: DWVCPYPSRSRWPGT*APWAPPPRVRPGTH Trigger: ATGTGTGCCGGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS CCA 90 bp | TTCGGACACAGCGACTGGGTGTGTCCATATCCGTCCAGGAGCCGTTaGCCAGGCACTTGCGCACCTTGGGCCCCACCACCTCGCGTTCGC | + |
Preference number: 5 (lower is better) Translates to: FGHSDWVCPYPSRSR*PGTCAPWAPPPRVR Trigger: GCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCTGTGTCCGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS TCA 90 bp | GTTCGATTCACCTGGCAGTGGGGCTTGGGGGTGCTCCACTGGCCCTaGCTACAGATGCTCCGGGAGCTGCCCACCAGATGGAAGTCGGGG | + |
Preference number: 5 (lower is better) Translates to: VRFTWQWGLGVLHWP*LQMLRELPTRWKSG Trigger: CCCCGACTTCCATCTGGTGGGCAGCTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCACCCCCAAGCCCCACTGCCAGGTGAATCGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS GCA 90 bp | GCTTGGGGGTGCTCCACTGGCCCTGACTACAGATGCTCCGGGAGCTaGCCACCAGATGGAAGTCGGGGTCACATCGGAAATCCACCCGGG | + |
Preference number: 5 (lower is better) Translates to: AWGCSTGPDYRCSGS*PPDGSRGHIGNPPG Trigger: CCCGGGTGGATTTCCGATGTGACCCCGACTTCCATCTGGTGGGCAGCTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCACCCCCAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS CCA 90 bp | TCATGCGGAGCGGAGACTGCGATGAGGGAAGGGTGCCACAGCGACTaGGTGTGTCCATATCCGTCCAGGAGCCGTTGGCCAGGCACTTGC | + |
Preference number: 5 (lower is better) Translates to: SCGAETAMREGCHSD*VCPYPSRSRWPGTC Trigger: GCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCTGTGGCACCCTTCCCTCATCGCAGTCTCCGCTCCGCATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS GCA 90 bp | TCCCACACCTGTTCATGCGGAGCGGAGACTGCGATGAGGGAAGGGTaGCACAGCGACTGGGTGTGTCCATATCCGTCCAGGAGCCGTTGG | + |
Preference number: 5 (lower is better) Translates to: SHTCSCGAETAMREG*HSDWVCPYPSRSRW Trigger: CCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCTGTGGCACCCTTCCCTCATCGCAGTCTCCGCTCCGCATGAACAGGTGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS CCA 90 bp | TGTCCATATCCGTCCAGGAGCCGTTGGCCAGGCACTTGCGCACCTTaGGCCCCACCACCTCGCGTTCGCCCCGGCACACATATTCAATCT | + |
Preference number: 5 (lower is better) Translates to: CPYPSRSRWPGTCAP*APPPRVRPGTHIQS Trigger: AGATTGAATATGTGTGCCGGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS-3UTR CAA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTTCCGTCCAGGAGCCGTaGGCCAGGCACTTGCGCACC | + |
Preference number: 5 (lower is better) Translates to: VKGMLPPARSVHLSMPSFSVQEP*ARHLRT Trigger: GGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGA...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR CAA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCGTCCAGGAGCCGTaGGCCAGGCACTTGCGCACC | + |
Preference number: 5 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCSVQEP*ARHLRT Trigger: GGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGA...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS CCA 90 bp | AGGTCTGGTCGGCTGGGGGAGACCCTCCGATCCACTTGTCTGTTTTaGACCAGGAAAGATCATCCTTGGTGCTGTCGTAGTAGCCGATCT | + |
Preference number: 5 (lower is better) Translates to: RSGRLGETLRSTCLF*TRKDHPWCCRSSRS Trigger: AGATCGGCTACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGTCCTGTGATGTCATGTaGGAAATGCTTCGGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: RSFPQETPQCERDAASRPSCDVM*EMLRVL Trigger: CAACACCCGAAGCATTTCCAACATGACATCACAGGA...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | GTGAAAGGGATGCTGCCTCCCGCCCGGTCAGTCCATCTGTCCATGCCTTCATTTGACCCTCCGATCCACTaGTCTGTTTTGGACCAGGAA | + |
Preference number: 5 (lower is better) Translates to: VKGMLPPARSVHLSMPSFDPPIH*SVLDQE Trigger: TTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGTC...AAATGAAGGCATGGACAGATGGACTGACCGGGCGGGAGGCAGCATCCCTTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | CACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGCCCACAGCAGTCAGATaGTTCAGGTTGGGCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: HIQLPRRGEDMVCVCVCVPTAVR*FRLGWE Trigger: CTCCCAGCCCAACCTGAACAATCTGACTGCTGTGGG...CACACACACACACACACACACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTAGGCACTTGCGCACCTaGGGCCCCACCACCTCGCGT | + |
Preference number: 5 (lower is better) Translates to: RRRMMEGDSNAEKWRESPRHLRT*GPTTSR Trigger: ACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCT...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000173823.8 |
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CDS-3UTR CAA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGCATGGCCCGGTAGATTaGGTCTGTAATGGTCTGGTT | + |
Preference number: 5 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVHGPVD*VCNGLV Trigger: AACCAGACCATTACAGACCAAATCTACCGGGCCATG...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGATCCTTCCCCCAAGAGACACCACAGTGTGAAAGGGATGCTGCCTCCCGCCCGCATCAATGTCTTCCTTaGGTTCCTCCTTGGCAAAAG | + |
Preference number: 5 (lower is better) Translates to: RSFPQETPQCERDAASRPHQCLP*VPPWQK Trigger: CTTTTGCCAAGGAGGAACCAAAGGAAGACATTGATG...CGGGCGGGAGGCAGCATCCCTTTCACACTGTGGTGTCTCTTGGGGGAAGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TGTGAAGACTGTGTGGACCCACCAGATCTTGGTGAACATAGAGCCATAGCCCAGTCCACAGGCAGGAAATaGATGGCCTTCACCTGGTCG | + |
Preference number: 5 (lower is better) Translates to: CEDCVDPPDLGEHRAIAQSTGRK*MAFTWS Trigger: CGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGGA...CTGGGCTATGGCTCTATGTTCACCAAGATCTGGTGGGTCCACACAGTCTTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS-3UTR CAA 90 bp | TCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGATCCGTCCAGGAGCCGTaGGCCAGGCACTTGCGCACC | + |
Preference number: 5 (lower is better) Translates to: SRREEYIYTRVWVPRKGRSVQEP*ARHLRT Trigger: GGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGA...TCTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CAA 90 bp | CACACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGCCTCCTCCAGAGGTCTaGTTCAAGGCCAAAGCCAAG | + |
Preference number: 5 (lower is better) Translates to: HTPTTTVHSQVQHMQTQVPPPEV*FKAKAK Trigger: CTTGGCTTTGGCCTTGAACAAGACCTCTGGAGGAGG...CACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS GCA 90 bp | CTCCGATCCACTTGTCTGTTTTGGACCAGGAAAGATCATCCTTGGTaGTGTCGTAGTAGCCGATCTTCTTGTAGCTGCCGCCCTGTAGCT | + |
Preference number: 5 (lower is better) Translates to: LRSTCLFWTRKDHPW*CRSSRSSCSCRPVA Trigger: AGCTACAGGGCGGCAGCTACAAGAAGATCGGCTACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGATCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CCA 90 bp | ACCCTCCGATCCACTTGTCTGTTTTGGACCAGGAAAGATCATCCTTaGTGCTGTCGTAGTAGCCGATCTTCTTGTAGCTGCCGCCCTGTA | + |
Preference number: 5 (lower is better) Translates to: TLRSTCLFWTRKDHP*CCRSSRSSCSCRPV Trigger: TACAGGGCGGCAGCTACAAGAAGATCGGCTACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CCA 90 bp | AAGAGTTTCTGTGACAGGAAACGGAATGTCTTGATGACCAAGGTCTaGTCGGCTGGGGGAGACCCTCCGATCCACTTGTCTGTTTTGGAC | + |
Preference number: 5 (lower is better) Translates to: KSFCDRKRNVLMTKV*SAGGDPPIHLSVLD Trigger: GTCCAAAACAGACAAGTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTCCTGTCACAGAAACTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TGGACCAAGCAGATCCAGGCATTGGGATGCATAATTAGCCTAGTTCTTGTGTGCTCCACAGGCAGGAAATaGATGGCCTTCACCTGGTCG | + |
Preference number: 5 (lower is better) Translates to: WTKQIQALGCIISLVLVCSTGRK*MAFTWS Trigger: CGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGGA...GCACACAAGAACTAGGCTAATTATGCATCCCAATGCCTGGATCTGCTTGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CAA 90 bp | GTTAACTGCTTTATTGAGATTCAGGGAGATCCTTCCCCCAAGAGACACCACAGTGAAACCGCTGTCGGTTaGACAAGGCTGGTGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: VNCFIEIQGDPSPKRHHSETAVG*TRLVSW Trigger: CCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTC...ACTGTGGTGTCTCTTGGGGGAAGGATCTCCCTGAATCTCAATAAAGCAGTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | CCAATACTCAGAAGGCTGAGACAGGAAGCCTGCCCTGACACGAGTCAGGGCAACTGTCTTTTCAGCCGCTaGGTTAGTTTCTCCACAAAT | + |
Preference number: 5 (lower is better) Translates to: PILRRLRQEACPDTSQGNCLFSR*VSFSTN Trigger: ATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACA...GTTGCCCTGACTCGTGTCAGGGCAGGCTTCCTGTCTCAGCCTTCTGAGTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | CACATCATGCACGCCTACCCAAGCACACCACTGCACACACCCACAACCACTGTGTCTTCCTCATTGTTGTaGGTGGATGATCCTGTTTTC | + |
Preference number: 5 (lower is better) Translates to: HIMHAYPSTPLHTPTTTVSSSLL*VDDPVF Trigger: GAAAACAGGATCATCCACCAACAACAATGAGGAAGA...CACAGTGGTTGTGGGTGTGTGCAGTGGTGTGCTTGGGTAGGCGTGCATGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | ACAGTCTTAAGAGCTCAAAATAAGGACTTAGTCAAAATGAAGAACCCTGAAGCTTCCGTCCAGGAGCCGTaGGCCAGGCACTTGCGCACC | + |
Preference number: 5 (lower is better) Translates to: TVLRAQNKDLVKMKNPEASVQEP*ARHLRT Trigger: GGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGA...AGCTTCAGGGTTCTTCATTTTGACTAAGTCCTTATTTTGAGCTCTTAAGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CAA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGGAAACCGCTGTCGGTTaGACAAGGCTGGTGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: KEDRTSARQTTVIPILRRETAVG*TRLVSW Trigger: CCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTC...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGGACCCTCCGATCCACTaGTCTGTTTTGGACCAGGAA | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVVSPLEEATFKDPPIH*SVLDQE Trigger: TTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGTC...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | ACTAATCGAGCCCTTCATCTCATCCCGCTCTGCCCCACTAATCCCTGCATGGAACATCAATGTCTTCCTTaGGTTCCTCCTTGGCAAAAG | + |
Preference number: 5 (lower is better) Translates to: TNRALHLIPLCPTNPCMEHQCLP*VPPWQK Trigger: CTTTTGCCAAGGAGGAACCAAAGGAAGACATTGATG...TTCCATGCAGGGATTAGTGGGGCAGAGCGGGATGAGATGAAGGGCTCGATTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CAA 90 bp | TCTTCCCAAGATGCTCAGAGTTCCTTAGAGAACGGTTTCCAAGTTCTGAGGCGCCATGTATTCATCTTCTaGGAGCTGCAGTGCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: SSQDAQSSLENGFQVLRRHVFIF*ELQCSS Trigger: GCTGGAGCACTGCAGCTCCAAGAAGATGAATACATG...GCGCCTCAGAACTTGGAAACCGTTCTCTAAGGAACTCTGAGCATCTTGGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CAA 90 bp | GTCTTCTTCCATCTGCCCTTGAATTATCACTGTTCTGGTCATTCTGCCCCAATTTCCACAGGCAGGAAATaGATGGCCTTCACCTGGTCG | + |
Preference number: 5 (lower is better) Translates to: VFFHLPLNYHCSGHSAPISTGRK*MAFTWS Trigger: CGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGGA...AATTGGGGCAGAATGACCAGAACAGTGATAATTCAAGGGCAGATGGAAGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTCCTCCTCCAGAGGTCTaGTTCAAGGCCAAAGCCAAG | + |
Preference number: 5 (lower is better) Translates to: RRRMMEGDSNAEKWRESPPPPEV*FKAKAK Trigger: CTTGGCTTTGGCCTTGAACAAGACCTCTGGAGGAGG...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCATGGCCCGGTAGATTaGGTCTGTAATGGTCTGGTT | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVVSPLEEATFKHGPVD*VCNGLV Trigger: AACCAGACCATTACAGACCAAATCTACCGGGCCATG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | CTCTGCCCCACTAATCCCTGCATGGAACAATCACACAGCTCTTTGCACCTCTCTATCCACTTGTCTGTTTaGGACCAGGAAAGATCATCC | + |
Preference number: 5 (lower is better) Translates to: LCPTNPCMEQSHSSLHLSIHLSV*DQERSS Trigger: GGATGATCTTTCCTGGTCCAAAACAGACAAGTGGAT...AGAGAGGTGCAAAGAGCTGTGTGATTGTTCCATGCAGGGATTAGTGGGGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGCATGTATTCATCTTCTaGGAGCTGCAGTGCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVVSPLEEATFKHVFIF*ELQCSS Trigger: GCTGGAGCACTGCAGCTCCAAGAAGATGAATACATG...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | GACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGCTGAGAACGGCCCTGTGGTCATaGATCTTTTCAGTGGACACA | + |
Preference number: 5 (lower is better) Translates to: DRTSARQTTVIPILRRLRTALWS*IFSVDT Trigger: TGTGTCCACTGAAAAGATCAATGACCACAGGGCCGT...TCTCAGCCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TTCCAGGAGAGAAGAGTATATATATACAAGAGTTTGGGTGCCCAGAAAAGGGAGTCCACAGGCAGGAAATaGATGGCCTTCACCTGGTCG | + |
Preference number: 5 (lower is better) Translates to: FQERRVYIYKSLGAQKRESTGRK*MAFTWS Trigger: CGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGGA...CTCCCTTTTCTGGGCACCCAAACTCTTGTATATATATACTCTTCTCTCCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGGTGAGTCCCCTGGAAGAAGCAACATTTAAGTCCTGTGATGTCATGTaGGAAATGCTTCGGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: CVCVCVCVVSPLEEATFKSCDVM*EMLRVL Trigger: CAACACCCGAAGCATTTCCAACATGACATCACAGGA...CTTAAATGTTGCTTCTTCCAGGGGACTCACCACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | CCCGGTCAGTCCATCTGTCCATGCCTTCATTTGATCAAATGTGCACCCACTATCATCCACTTGTCTGTTTaGGACCAGGAAAGATCATCC | + |
Preference number: 5 (lower is better) Translates to: PGQSICPCLHLIKCAPTIIHLSV*DQERSS Trigger: GGATGATCTTTCCTGGTCCAAAACAGACAAGTGGAT...GATAGTGGGTGCACATTTGATCAAATGAAGGCATGGACAGATGGACTGACCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTGATAATCCCACAGCAGTCAGATaGTTCAGGTTGGGCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: RMMEGDSNAEKWRESPDNPTAVR*FRLGWE Trigger: CTCCCAGCCCAACCTGAACAATCTGACTGCTGTGGG...ATTATCAGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGAGAGGAGAGGATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTTTGGTTCCTCCTaGGCAAAAGTCTCAATGGTT | + |
Preference number: 5 (lower is better) Translates to: RRGEDMVCVCVCVCVCVCSFGSS*AKVSMV Trigger: AACCATTGAGACTTTTGCCAAGGAGGAACCAAAGGA...ACACACACACACACACACACACACACACACACACACCATATCCTCTCCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | TTCTTCCTGTCTGATGAGGAGGAGACTCTTCACATCTGCTCAGCCACCTACTCCTTCTCTTCCTCATTGTaGTTGGTGGATGATCCTGTT | + |
Preference number: 5 (lower is better) Translates to: FFLSDEEETLHICSATYSFSSSL*LVDDPV Trigger: AACAGGATCATCCACCAACAACAATGAGGAAGAGAA...GGAGTAGGTGGCTGAGCAGATGTGAAGAGTCTCCTCCTCATCAGACAGGAAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS-3UTR CAA 90 bp | AAAGAAGACAGGACATCAGCTAGGCAGACAACTGTAATCCCAATACTCAGAAGGGTCAGATTGTTCAGGTaGGGCTGGGAGTTCTGGATA | + |
Preference number: 5 (lower is better) Translates to: KEDRTSARQTTVIPILRRVRLFR*GWEFWI Trigger: TATCCAGAACTCCCAGCCCAACCTGAACAATCTGAC...CCTTCTGAGTATTGGGATTACAGTTGTCTGCCTAGCTGATGTCCTGTCTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | ACACCCACAACCACTGTGCACTCACAGGTGCAGCATATGCAAACACAAGTGATATCCTTTGGTTCCTCCTaGGCAAAAGTCTCAATGGTT | + |
Preference number: 5 (lower is better) Translates to: TPTTTVHSQVQHMQTQVISFGSS*AKVSMV Trigger: AACCATTGAGACTTTTGCCAAGGAGGAACCAAAGGA...TATCACTTGTGTTTGCATATGCTGCACCTGTGAGTGCACAGTGGTTGTGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTACGGCCCTGTGGTCATaGATCTTTTCAGTGGACACA | + |
Preference number: 5 (lower is better) Translates to: RRRMMEGDSNAEKWRESPTALWS*IFSVDT Trigger: TGTGTCCACTGAAAAGATCAATGACCACAGGGCCGT...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGAGTTGCTGTAGTAACAACTATACAAGACAGCCTATGGGAGACAAACGAGATGTCAGATTGTTCAGGTaGGGCTGGGAGTTCTGGATA | + |
Preference number: 5 (lower is better) Translates to: RSCCSNNYTRQPMGDKRDVRLFR*GWEFWI Trigger: TATCCAGAACTCCCAGCCCAACCTGAACAATCTGAC...ATCTCGTTTGTCTCCCATAGGCTGTCTTGTATAGTTGTTACTACAGCAACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | ACCATGACATATGCACATGAGGAAGACAGCTTGGTGTGCTCAACACATCATGCATGTCTTTTCAGCCGCTaGGTTAGTTTCTCCACAAAT | + |
Preference number: 5 (lower is better) Translates to: TMTYAHEEDSLVCSTHHACLFSR*VSFSTN Trigger: ATTTGTGGAGAAACTAACCAAGCGGCTGAAAAGACA...TGCATGATGTGTTGAGCACACCAAGCTGTCTTCCTCATGTGCATATGTCATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AACATATTTGCACAGAAACACATCCAGCTGCCTAGGAGAGGAGAGGATATGGTGTTCTCTTCCTCATTGTaGTTGGTGGATGATCCTGTT | + |
Preference number: 5 (lower is better) Translates to: NIFAQKHIQLPRRGEDMVFSSSL*LVDDPV Trigger: AACAGGATCATCCACCAACAACAATGAGGAAGAGAA...CACCATATCCTCTCCTCTCCTAGGCAGCTGGATGTGTTTCTGTGCAAATATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS-3UTR CAA 90 bp | AGGAGAAGGATGATGGAAGGAGATTCTAATGCTGAGAAATGGAGAGAAAGCCCTTCTTCCTCATTGTTGTaGGTGGATGATCCTGTTTTC | + |
Preference number: 5 (lower is better) Translates to: RRRMMEGDSNAEKWRESPSSSLL*VDDPVF Trigger: GAAAACAGGATCATCCACCAACAACAATGAGGAAGA...AGGGCTTTCTCTCCATTTCTCAGCATTAGAATCTCCTTCCATCATCCTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CCA 72 bp | CCGTCCAGGAGCCGTTGGCCAGGCACTTGCGCACCTTaGGCCCCACCACCTCGCGTTCGCCCCGGCACACAT | + |
Preference number: 6 (lower is better) Translates to: PSRSRWPGTCAP*APPPRVRPGTH Trigger: ATGTGTGCCGGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS CAA 72 bp | TCCGTCCAGGAGCCGTTGGCCAGGCACTTGCGCACCTaGGGCCCCACCACCTCGCGTTCGCCCCGGCACACA | + |
Preference number: 6 (lower is better) Translates to: SVQEPLARHLRT*GPTTSRSPRHT Trigger: TGTGTGCCGGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS GCA 72 bp | TGTCCATATCCGTCCAGGAGCCGTTGGCCAGGCACTTaGGCACCTTGGGCCCCACCACCTCGCGTTCGCCCC | + |
Preference number: 6 (lower is better) Translates to: CPYPSRSRWPGT*APWAPPPRVRP Trigger: GGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS GCA 72 bp | GTGGCGTTCGATTCACCTGGCAGTGGGGCTTGGGGGTaGTCCACTGGCCCTGACTACAGATGCTCCGGGAGC | + |
Preference number: 6 (lower is better) Translates to: VAFDSPGSGAWG*STGPDYRCSGS Trigger: GCTCCCGGAGCATCTGTAGTCAGGGCCAGTGGAGCACCCCCAAGCCCCACTGCCAGGTGAATCGAACGCCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS CCA 72 bp | AGCGACTGGGTGTGTCCATATCCGTCCAGGAGCCGTTaGCCAGGCACTTGCGCACCTTGGGCCCCACCACCT | + |
Preference number: 6 (lower is better) Translates to: SDWVCPYPSRSR*PGTCAPWAPPP Trigger: AGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS CCA 72 bp | GCGGAGACTGCGATGAGGGAAGGGTGCCACAGCGACTaGGTGTGTCCATATCCGTCCAGGAGCCGTTGGCCA | + |
Preference number: 6 (lower is better) Translates to: AETAMREGCHSD*VCPYPSRSRWP Trigger: TGGCCAACGGCTCCTGGACGGATATGGACACACCCAGTCGCTGTGGCACCCTTCCCTCATCGCAGTCTCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS CAA 90 bp | GTGTCCATATCCGTCCAGGAGCCGTTGGCCAGGCACTTGCGCACCTaGGGCCCCACCACCTCGCGTTCGCCCCGGCACACATATTCAATC | + |
Preference number: 6 (lower is better) Translates to: VSISVQEPLARHLRT*GPTTSRSPRHTYSI Trigger: GATTGAATATGTGTGCCGGGGCGAACGCGAGGTGGTGGGGCCCAAGGTGCGCAAGTGCCTGGCCAACGGCTCCTGGACGGATATGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS TCA 72 bp | CCTCCCACACCTGTTCATGCGGAGCGGAGACTGCGATaGGGGAAGGGTGCCACAGCGACTGGGTGTGTCCAT | + |
Preference number: 6 (lower is better) Translates to: PPTPVHAERRLR*GKGATATGCVH Trigger: ATGGACACACCCAGTCGCTGTGGCACCCTTCCCTCATCGCAGTCTCCGCTCCGCATGAACAGGTGTGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS GCA 72 bp | TGTTCATGCGGAGCGGAGACTGCGATGAGGGAAGGGTaGCACAGCGACTGGGTGTGTCCATATCCGTCCAGG | + |
Preference number: 6 (lower is better) Translates to: CSCGAETAMREG*HSDWVCPYPSR Trigger: CCTGGACGGATATGGACACACCCAGTCGCTGTGGCACCCTTCCCTCATCGCAGTCTCCGCTCCGCATGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173823.8 |
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CDS TCA 72 bp | GGGAAACAGCGCCCCGATGTATACTGCACGCCGTTCTaGGTGTGGCGTTCGATTCACCTGGCAGTGGGGCTT | + |
Preference number: 6 (lower is better) Translates to: GKQRPDVYCTPF*VWRSIHLAVGL Trigger: AAGCCCCACTGCCAGGTGAATCGAACGCCACACTCAGAACGGCGTGCAGTATACATCGGGGCGCTGTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025338.16 |
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CDS CCA 72 bp | GTCACATCGGAAATCCACCCGGGCTCCATCCAGAGCTaGGAGGTCCCCACCCGTCAGGAAAACCTTCCCATT | + |
Preference number: 6 (lower is better) Translates to: VTSEIHPGSIQS*EVPTRQENLPI Trigger: AATGGGAAGGTTTTCCTGACGGGTGGGGACCTCCCAGCTCTGGATGGAGCCCGGGTGGATTTCCGATGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000174456.8 |
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CDS CCA 72 bp | CGGCTGGGGGAGACCCTCCGATCCACTTGTCTGTTTTaGACCAGGAAAGATCATCCTTGGTGCTGTCGTAGT | + |
Preference number: 6 (lower is better) Translates to: RLGETLRSTCLF*TRKDHPWCCRS Trigger: ACTACGACAGCACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGTCTCCCCCAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CCA 72 bp | TGTGACAGGAAACGGAATGTCTTGATGACCAAGGTCTaGTCGGCTGGGGGAGACCCTCCGATCCACTTGTCT | + |
Preference number: 6 (lower is better) Translates to: CDRKRNVLMTKV*SAGGDPPIHLS Trigger: AGACAAGTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTCCTGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CAA 72 bp | AAGGTCTGGTCGGCTGGGGGAGACCCTCCGATCCACTaGTCTGTTTTGGACCAGGAAAGATCATCCTTGGTG | + |
Preference number: 6 (lower is better) Translates to: KVWSAGGDPPIH*SVLDQERSSLV Trigger: CACCAAGGATGATCTTTCCTGGTCCAAAACAGACAAGTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CAA 90 bp | TGGCGGATGGATGTGTCCGAAAGAACGTTGGAAACCGCTGTCGGTTaGACAAGGCTGGTGAGCTGGAGCCATATGAGAGCTTGCTGTCGT | + |
Preference number: 6 (lower is better) Translates to: WRMDVSERTLETAVG*TRLVSWSHMRACCR Trigger: ACGACAGCAAGCTCTCATATGGCTCCAGCTCACCAGCCTTGTCAAACCGACAGCGGTTTCCAACGTTCTTTCGGACACATCCATCCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174347.2 |
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CDS CCA 72 bp | GAAACGGAATGTCTTGATGACCAAGGTCTGGTCGGCTaGGGGAGACCCTCCGATCCACTTGTCTGTTTTGGA | + |
Preference number: 6 (lower is better) Translates to: ETECLDDQGLVG*GRPSDPLVCFG Trigger: TCCAAAACAGACAAGTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CAA 90 bp | ACTGAGACGGAGATAAAGAGTTTCTGTGACAGGAAACGGAATGTCTaGATGACCAAGGTCTGGTCGGCTGGGGGAGACCCTCCGATCCAC | + |
Preference number: 6 (lower is better) Translates to: TETEIKSFCDRKRNV*MTKVWSAGGDPPIH Trigger: GTGGATCGGAGGGTCTCCCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTCCTGTCACAGAAACTCTTTATCTCCGTCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS CAA 72 bp | GAGATAAAGAGTTTCTGTGACAGGAAACGGAATGTCTaGATGACCAAGGTCTGGTCGGCTGGGGGAGACCCT | + |
Preference number: 6 (lower is better) Translates to: EIKSFCDRKRNV*MTKVWSAGGDP Trigger: AGGGTCTCCCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTCCTGTCACAGAAACTCTTTATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025338.16 ENSMUST00000172792.8 |
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CDS TCA 72 bp | ACACATATTCAATCTCATAGTCCACAGGCAGGAAATTaGTGGCCTTCACCTGGTCGCGAGTCAAGCCACGGT | + |
Preference number: 6 (lower is better) Translates to: THIQSHSPQAGN*WPSPGRESSHG Trigger: ACCGTGGCTTGACTCGCGACCAGGTGAAGGCCATCAATTTCCTGCCTGTGGACTATGAGATTGAATATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000173823.8 ENSMUST00000174456.8 |
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CDS CCA 72 bp | GGAAAACCTTCCCATTTTCCAGGGTCAAATAAGACTTaGAGCAGATTCGGACACAGCGACTGGGTGTGTCCA | + |
Preference number: 6 (lower is better) Translates to: GKPSHFPGSNKT*SRFGHSDWVCP Trigger: TGGACACACCCAGTCGCTGTGTCCGAATCTGCTCCAAGTCTTATTTGACCCTGGAAAATGGGAAGGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025338.16 ENSMUST00000172789.2 ENSMUST00000174456.8 |