Pregenerated sensors for GABARAP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018567

Ensembl transcript IDs: ENSMUST00000018711.15

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	CTCGGTGGTTTCCTTTTTATTGATGTGCCTCCTACCTCCCCCATCCAATGTCAAAAGTCTAAATCAGAGTaGGAATGGAGGGTAAACAAG	+
Preference number: 2 (lower is better) Translates to: LGGFLFIDVPPTSPIQCQKSKSE*EWRVNK Trigger: CTTGTTTACCCTCCATTCCCACTCTGATTTAGACTT...TTGACATTGGATGGGGGAGGTAGGAGGCACATCAATAAAAAGGAAACCACCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018711.15
CDS-3UTR TCA 90 bp	GTAAACAAGGGGAGAAAGAGATGTATGGAGGCTGTATCTACCATTACCCCTCCTTCTTCAGCACGGAGATaGATTCGCTTCCGGATCAAG	+
Preference number: 4 (lower is better) Translates to: VNKGRKRCMEAVSTITPPSSARR*IRFRIK Trigger: CTTGATCCGGAAGCGAATTCATCTCCGTGCTGAAGA...AGGAGGGGTAATGGTAGATACAGCCTCCATACATCTCTTTCTCCCCTTGTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018711.15

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