RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GAB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000004508

Ensembl transcript IDs: ENSMUST00000004622.7, ENSMUST00000206791.2

Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTGGGGATGGAGAAGCAGCCCTGAGGTAGAGGGTAGAGAGCAGTaGGCAGACACGAGGCATGAGCCTAGCTCAGAGCTTCAGCCCTCC +
Preference number: 1 (lower is better)
Translates to: RWGWRSSPEVEGREQ*ADTRHEPSSELQPS
Trigger: GGAGGGCTGAAGCTCTGAGCTAGGCTCATGCCTCGTGTCTGCTCACTGCTCTCTACCCTCTACCTCAGGGCTGCTTCTCCATCCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp CCCATGGCAAGTCTGGATGTTCCTGCCTTTCCAAGAACCCAGATATaGGAAGCCCCAGCAATATGGCCCTCTAAGGTCAGCCTGCTTCCC +
Preference number: 1 (lower is better)
Translates to: PMASLDVPAFPRTQI*EAPAIWPSKVSLLP
Trigger: GGGAAGCAGGCTGACCTTAGAGGGCCATATTGCTGGGGCTTCCCATATCTGGGTTCTTGGAAAGGCAGGAACATCCAGACTTGCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp CCCAGATATGGGAAGCCCCAGCAATATGGCCCTCTAAGGTCAGCCTaGTTCCCCACACTTTACAGCCAAAGGCCTGAATGGGAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: PRYGKPQQYGPLRSA*FPTLYSQRPEWEGR
Trigger: TCTTCCTTCCCATTCAGGCCTTTGGCTGTAAAGTGTGGGGAAGCAGGCTGACCTTAGAGGGCCATATTGCTGGGGCTTCCCATATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp CATAGCTTACAGAGCTGTGTTGCAGGGAGGGGAGGGAGCCACGGCTaGGACTATAGCTACTGTTATATAAAGGGCCCAAAGGCAGACCTG +
Preference number: 1 (lower is better)
Translates to: HSLQSCVAGRGGSHG*DYSYCYIKGPKADL
Trigger: CAGGTCTGCCTTTGGGCCCTTTATATAACAGTAGCTATAGTCCCAGCCGTGGCTCCCTCCCCTCCCTGCAACACAGCTCTGTAAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp ACTCCTGTCCCAGGATCCTTCCTGCCTCCCATCCCCCATATCACCTaGTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: TPVPGSFLPPIPHIT*YCLPYSVSSHYQGQ
Trigger: CTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTGATATGGGGGATGGGAGGCAGGAAGGATCCTGGGACAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp CATGTATGTATGGAGGCCAGTAGAGGGCATCAAATCCCGTGGAACTaGATTACAAGCTGTTGTGAGCCACCCAGTGTGGGTGCTGGGAAC +
Preference number: 1 (lower is better)
Translates to: HVCMEASRGHQIPWN*ITSCCEPPSVGAGN
Trigger: GTTCCCAGCACCCACACTGGGTGGCTCACAACAGCTTGTAATCCAGTTCCACGGGATTTGATGCCCTCTACTGGCCTCCATACATACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp CTCCTACCTACTAGAAACTTTCTTTCCATGGCAGTGTCCCTGTACTaGTCTGAGCTTAGCACACTCCTGTCCCAGGATCCTTCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: LLPTRNFLSMAVSLY*SELSTLLSQDPSCL
Trigger: GAGGCAGGAAGGATCCTGGGACAGGAGTGTGCTAAGCTCAGAGCAGTACAGGGACACTGCCATGGAAAGAAAGTTTCTAGTAGGTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp CAGCACAAATTATCAGCAGGTGCCCATGGCAAGTCTGGATGTTCCTaGCTTTCCAAGAACCCAGATATGGGAAGCCCCAGCAATATGGCC +
Preference number: 1 (lower is better)
Translates to: QHKLSAGAHGKSGCS*LSKNPDMGSPSNMA
Trigger: GGCCATATTGCTGGGGCTTCCCATATCTGGGTTCTTGGAAAGGCAGGAACATCCAGACTTGCCATGGGCACCTGCTGATAATTTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp GTGTACCATGTATGTATGGAGGCCAGTAGAGGGCATCAAATCCCGTaGAACTGGATTACAAGCTGTTGTGAGCCACCCAGTGTGGGTGCT +
Preference number: 1 (lower is better)
Translates to: VYHVCMEASRGHQIP*NWITSCCEPPSVGA
Trigger: AGCACCCACACTGGGTGGCTCACAACAGCTTGTAATCCAGTTCCACGGGATTTGATGCCCTCTACTGGCCTCCATACATACATGGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 90 bp AAACACATTCAGATCTCCCTGCCCTACCTTAAGAGCCTTAGGCAATaGCAGCTTCCCATCCCTTCTGCTCTGGTGACCTCTGAAGCCATG +
Preference number: 1 (lower is better)
Translates to: KHIQISLPYLKSLRQ*QLPIPSALVTSEAM
Trigger: CATGGCTTCAGAGGTCACCAGAGCAGAAGGGATGGGAAGCTGTCATTGCCTAAGGCTCTTAAGGTAGGGCAGGGAGATCTGAATGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp ATACCTAGCCCTGCTATCAGCTCCGGCAGCATCAGTCAAAAGCTTTaGCACATGGGAGATCCACTGAAGGCCTTAAAGGACACCATGAGT +
Preference number: 1 (lower is better)
Translates to: IPSPAISSGSISQKL*HMGDPLKALKDTMS
Trigger: ACTCATGGTGTCCTTTAAGGCCTTCAGTGGATCTCCCATGTGGCAAAGCTTTTGACTGATGCTGCCGGAGCTGATAGCAGGGCTAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp GAACACACACCACCAGATACCAGGACAGCACAAATTATCAGCAGGTaGCCATGGCAAGTCTGGATGTTCCTGCCTTTCCAAGAACCCAGA +
Preference number: 1 (lower is better)
Translates to: EHTPPDTRTAQIISR*PWQVWMFLPFQEPR
Trigger: TCTGGGTTCTTGGAAAGGCAGGAACATCCAGACTTGCCATGGGCACCTGCTGATAATTTGTGCTGTCCTGGTATCTGGTGGTGTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp TTGGTCGGAGTAAAGAAGGTTCATTCTTCTCCTGGCCTGGAAAAGTaGCCAATGGCAGCCCATCAAGATGAGCAGAATTGGGCACACCAG +
Preference number: 1 (lower is better)
Translates to: LVGVKKVHSSPGLEK*PMAAHQDEQNWAHQ
Trigger: CTGGTGTGCCCAATTCTGCTCATCTTGATGGGCTGCCATTGGGCACTTTTCCAGGCCAGGAGAAGAATGAACCTTCTTTACTCCGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp CTAAGGTCAGCCTGCTTCCCCACACTTTACAGCCAAAGGCCTGAATaGGAAGGAAGAGCTCCCTCTTCTCATAGCTTACAGAGCTGTGTT +
Preference number: 1 (lower is better)
Translates to: LRSACFPTLYSQRPE*EGRAPSSHSLQSCV
Trigger: AACACAGCTCTGTAAGCTATGAGAAGAGGGAGCTCTTCCTTCCCATTCAGGCCTTTGGCTGTAAAGTGTGGGGAAGCAGGCTGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp ACACCACCAGATACCAGGACAGCACAAATTATCAGCAGGTGCCCATaGCAAGTCTGGATGTTCCTGCCTTTCCAAGAACCCAGATATGGG +
Preference number: 1 (lower is better)
Translates to: TPPDTRTAQIISRCP*QVWMFLPFQEPRYG
Trigger: CCCATATCTGGGTTCTTGGAAAGGCAGGAACATCCAGACTTGCCATGGGCACCTGCTGATAATTTGTGCTGTCCTGGTATCTGGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 90 bp TTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTaGTATTGGGTACCACCCTGCAGGTTATCAGCTACACTCCCATAT +
Preference number: 1 (lower is better)
Translates to: FQQSFIFQSSATTMA*YWVPPCRLSATLPY
Trigger: ATATGGGAGTGTAGCTGATAACCTGCAGGGTGGTACCCAATATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp GTGGCAGAGTCCTCTAGCTCCAAGCTTTGTCACCCCAAAGACTTCTaGTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCCAGCAGT +
Preference number: 1 (lower is better)
Translates to: VAESSSSKLCHPKDF*CSWLLIIVSFPSSS
Trigger: ACTGCTGGAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCTTGGAGCTAGAGGACTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp CTAGATTTCCTTGGTCAAAGTATGACTCCTTCTCATTCTGCTTCCTaGTGTACTTCTGCATGTGGCCTTGGGCTCCCCATCAGGCCTTTT +
Preference number: 1 (lower is better)
Translates to: LDFLGQSMTPSHSAS*CTSACGLGLPIRPF
Trigger: AAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTCATACTTTGACCAAGGAAATCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp TTAGTTTCTACCATCCCTGCAGCTGAGGACAACAGAGAAAAGATCTaGTCTGGCATTAGGTCAGAGGTGCTTCTGTCTGGCACAAGCCAT +
Preference number: 1 (lower is better)
Translates to: LVSTIPAAEDNREKI*SGIRSEVLLSGTSH
Trigger: ATGGCTTGTGCCAGACAGAAGCACCTCTGACCTAATGCCAGACCAGATCTTTTCTCTGTTGTCCTCAGCTGCAGGGATGGTAGAAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 90 bp CATCTCCTTTCTTTACTGTTCCTACTAAAGTTTAGTCTAGTAGGATaGAGTGGGAAGAGGCCCTGCCCTGCAGGACAGGTACTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: HLLSLLFLLKFSLVG*SGKRPCPAGQVLVG
Trigger: TCCCACAAGTACCTGTCCTGCAGGGCAGGGCCTCTTCCCACTTCATCCTACTAGACTAAACTTTAGTAGGAACAGTAAAGAAAGGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 90 bp CAGAGGTGCTTCTGTCTGGCACAAGCCATTACCCAGACCCTCATGTaGTTTCTAGATTTCCTTGGTCAAAGTATGACTCCTTCTCATTCT +
Preference number: 1 (lower is better)
Translates to: QRCFCLAQAITQTLM*FLDFLGQSMTPSHS
Trigger: AGAATGAGAAGGAGTCATACTTTGACCAAGGAAATCTAGAAATCACATGAGGGTCTGGGTAATGGCTTGTGCCAGACAGAAGCACCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 90 bp TTTCAAATGATCATCCAGGTTCTTACAGCAGCAGAGTATCAGCTGTaGCCATCCCATTTCACAGACTGGCAAGTCTCAAGGAGATGCCAT +
Preference number: 1 (lower is better)
Translates to: FQMIIQVLTAAEYQL*PSHFTDWQVSRRCH
Trigger: ATGGCATCTCCTTGAGACTTGCCAGTCTGTGAAATGGGATGGTCACAGCTGATACTCTGCTGCTGTAAGAACCTGGATGATCATTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp TCCTCTAGCTCCAAGCTTTGTCACCCCAAAGACTTCTGCTGTTCCTaGTTGCTTATCATTGTCAGTTTTCCTTCCAGCAGTCCTTCATAT +
Preference number: 1 (lower is better)
Translates to: SSSSKLCHPKDFCCS*LLIIVSFPSSSPSY
Trigger: ATATGAAGGACTGCTGGAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCTTGGAGCTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 90 bp GGCACAAGCCATTACCCAGACCCTCATGTGATTTCTAGATTTCCTTaGTCAAAGTATGACTCCTTCTCATTCTGCTTCCTGCTGTACTTC +
Preference number: 1 (lower is better)
Translates to: GTSHYPDPHVISRFP*SKYDSFSFCFLLYF
Trigger: GAAGTACAGCAGGAAGCAGAATGAGAAGGAGTCATACTTTGACCAAGGAAATCTAGAAATCACATGAGGGTCTGGGTAATGGCTTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 90 bp GCAACTTCCGACTTCCACTATCAACCATTTCATCTTGTGTCACCTTaGCTTTTCCTTGCCAAAGTTGCAGGGATAGGAAAACACATGTGT +
Preference number: 1 (lower is better)
Translates to: ATSDFHYQPFHLVSP*LFLAKVAGIGKHMC
Trigger: ACACATGTGTTTTCCTATCCCTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGAAATGGTTGATAGTGGAAGTCGGAAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp CCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCATCAGGCCTTTaGGACACATGTCCCCACTTGCTACATGTCTTGCCGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PAVLLHVALGSPSGL*DTCPHLLHVLPASQ
Trigger: CTGGGAGGCCGGCAAGACATGTAGCAAGTGGGGACATGTGTCCAAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp CCTCACCTCGTCTGTCTCCTCCATGGACCCACCTCTGCCTATCCTTaGCCTAAAACTCATTCTGCTCCCTCCTTGAGGCTTCCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PHLVCLLHGPTSAYP*PKTHSAPSLRLPLP
Trigger: AGGGAGGGGAAGCCTCAAGGAGGGAGCAGAATGAGTTTTAGGCAAAGGATAGGCAGAGGTGGGTCCATGGAGGAGACAGACGAGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GATCCTTCCTGCCTCCCATCCCCCATATCACCTGCTACTGTCTTCCCTACTCTGGAGGGTAGAGAGCAGTaGGCAGACACGAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: DPSCLPSPISPATVFPTLEGREQ*ADTRHE
Trigger: CTCATGCCTCGTGTCTGCTCACTGCTCTCTACCCTC...CAGAGTAGGGAAGACAGTAGCAGGTGATATGGGGGATGGGAGGCAGGAAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTTCCCTTCTGCTCTGGTaGCCTCTGAAGCCATGGAAG +
Preference number: 2 (lower is better)
Translates to: GGCILREGLGLAWTHDHSSLLLW*PLKPWK
Trigger: CTTCCATGGCTTCAGAGGTCACCAGAGCAGAAGGGA...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCCTGGCCTGGAAAAGTaGCCAATGGCAGCCCATCAA +
Preference number: 2 (lower is better)
Translates to: GGCILREGLGLAWTHDHSPGLEK*PMAAHQ
Trigger: TTGATGGGCTGCCATTGGGCACTTTTCCAGGCCAGG...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTATTCTCCGCTGGGGATaGAGAAGCAGCCCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: GGCILREGLGLAWTHDHSILRWG*RSSPEV
Trigger: TACCTCAGGGCTGCTTCTCCATCCCCAGCGGAGAAT...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGTGGGCAGCTGCCTCATaGCTCTTGAACTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALWAAAS*LLNLVA
Trigger: GGCCACCAAGTTCAAGAGCCATGAGGCAGCTGCCCA...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GGGAAGAGGCCCTGCCCTGCAGGACAGGTACTTGTGGGAGCTATGCTAAGAGGTAGCCACCAGGGGAGGTaGACTTTGACTTATGGATAT +
Preference number: 2 (lower is better)
Translates to: GKRPCPAGQVLVGAMLRGSHQGR*TLTYGY
Trigger: ATATCCATAAGTCAAAGTTCACCTCCCCTGGTGGCT...ACCTCTTAGCATAGCTCCCACAAGTACCTGTCCTGCAGGGCAGGGCCTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp GGGAAGAGGCCCTGCCCTGCAGGACAGGTACTTGTGGGAGCTATGCTAAGAGGTTCTCATTCTGCTTCCTaGTGTACTTCTGCATGTGGC +
Preference number: 2 (lower is better)
Translates to: GKRPCPAGQVLVGAMLRGSHSAS*CTSACG
Trigger: GCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGA...ACCTCTTAGCATAGCTCCCACAAGTACCTGTCCTGCAGGGCAGGGCCTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCTTTGGGCTTGGAGGATaGGTAGATGGTTGGGTACAT +
Preference number: 2 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLFGLGG*VDGWVH
Trigger: ATGTACCCAACCATCTACCCATCCTCCAAGCCCAAA...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GGGAAGAGGCCCTGCCCTGCAGGACAGGTACTTGTGGGAGCTATGCTAAGAGGTACCCAGACCCTCATGTaGTTTCTAGATTTCCTTGGT +
Preference number: 2 (lower is better)
Translates to: GKRPCPAGQVLVGAMLRGTQTLM*FLDFLG
Trigger: ACCAAGGAAATCTAGAAATCACATGAGGGTCTGGGT...ACCTCTTAGCATAGCTCCCACAAGTACCTGTCCTGCAGGGCAGGGCCTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGTCCCAGGATCCTTCCTaGCTCCCATCCCCCATATCA +
Preference number: 2 (lower is better)
Translates to: CILREGLGLAWTHDHSLKSQDPS*LPSPIS
Trigger: TGATATGGGGGATGGGAGGCAGGAAGGATCCTGGGA...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTGACTCCTTCTCATTCTaGTTCCTGCTGTACTTCTGC +
Preference number: 2 (lower is better)
Translates to: GGCILREGLGLAWTHDHSDSFSF*FLLYFC
Trigger: GCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCACATTCAGATCTCCCTaGCCTACCTTAAGAGCCTTA +
Preference number: 2 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLTFRSP*PTLRAL
Trigger: TAAGGCTCTTAAGGTAGGGCAGGGAGATCTGAATGT...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCCCAGGCCCTTGCCTCTaGTGGGAAAGGGTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGPGPCL*WERVRS
Trigger: GGACCTGACCCTTTCCCATCAGAGGCAAGGGCCTGG...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGTCTGGAGGAGAGAGGTaGGGTGTGTCTTTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: GTVKETGCPVPASASRVLSGGER*GVSLVL
Trigger: GAGAACTAAAGACACACCTCACCTCTCTCCTCCAGA...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGTTTAGTCTAGTAGGATaGAGTGGGAAGAGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GTVKETGCPVPASASRVLFSLVG*SGKRPC
Trigger: GCAGGGCCTCTTCCCACTTCATCCTACTAGACTAAA...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGCTCAATCCTGGAAGATaGCAGCCAGCTCCATTCACA +
Preference number: 2 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALLNPGR*QPAPFT
Trigger: TGTGAATGGAGCTGGCTGCCATCTTCCAGGATTGAG...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp CTCTCTAGACCCAACATCCAGCTCTTTCTGTTCATAGTCACAGCCTaGCAGCTGAAGAGGGACATGGGTGGCTGTATATTGAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: LSRPNIQLFLFIVTA*QLKRDMGGCILREG
Trigger: ACCCTCCCTCAATATACAGCCACCCATGTCCCTCTTCAGCTGCAAGGCTGTGACTATGAACAGAAAGAGCTGGATGTTGGGTCTAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGTATTGGGTACCACCCTaGAGGTTATCAGCTACACTC +
Preference number: 2 (lower is better)
Translates to: GTVKETGCPVPASASRVLYWVPP*RLSATL
Trigger: GAGTGTAGCTGATAACCTGCAGGGTGGTACCCAATA...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGCACCCCAAAGACTTCTaGTGTTCCTGGTTGCTTATC +
Preference number: 2 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALHPKDF*CSWLLI
Trigger: GATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTG...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGTGGTTCTTGGCTCCCTaGGTTATCATTCTCCGCTGG +
Preference number: 2 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKWFLAP*VIILRW
Trigger: CCAGCGGAGAATGATAACCCAGGGAGCCAAGAACCA...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGTGTACTTTGGTCGGCTaGTTCTTGGCTCCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKCTLVG*FLAPWV
Trigger: AACCCAGGGAGCCAAGAACCAGCCGACCAAAGTACA...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGATAATACCTCAATCCTaGAAGATGGCAGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: GTVKETGCPVPASASRVLIIPQS*KMAASS
Trigger: GGAGCTGGCTGCCATCTTCCAGGATTGAGGTATTAT...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATGAGTGCTTTGAAGGCTaGAAGTGGTACAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDECFEG*KWYRGE
Trigger: CTCTCCCCTGTACCACTTTCAGCCTTCAAAGCACTC...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGGTTAGGGACAAGGTATaGCTATACAAGGTAGCACAG +
Preference number: 2 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALVRDKV*LYKVAQ
Trigger: CTGTGCTACCTTGTATAGTCATACCTTGTCCCTAAC...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp TTTTGGCAACAGCTCCTAACTAAGGTGGTGGAGGCACAGCTAGTATaGACAGAAGTCATAGGTGGAACCCAAGTGGCAGAGGAAGTGTCT +
Preference number: 2 (lower is better)
Translates to: FWQQLLTKVVEAQLV*TEVIGGTQVAEEVS
Trigger: AGACACTTCCTCTGCCACTTGGGTTCCACCTATGACTTCTGTCAATACTAGCTGTGCCTCCACCACCTTAGTTAGGAGCTGTTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCTGCTCTGGTGACCTCTaGAGCCATGGAAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGCSGDL*SHGRRG
Trigger: TCCTCTCCTTCCATGGCTTCAGAGGTCACCAGAGCA...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATGACAGAAGTCATAGGTaGAACCCAAGTGGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDDRSHR*NPSGRG
Trigger: TCCTCTGCCACTTGGGTTCCACCTATGACTTCTGTC...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGTCATCTAGGGCAAAATaGAATGCTGGTTTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTESSRAK*NAGFPC
Trigger: ACAGGGAAAACCAGCATTTCATTTTGCCCTAGATGA...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCGCATTAGGTCAGAGGTaGTTCTGTCTGGCACAAGCC +
Preference number: 2 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGALGQR*FCLAQA
Trigger: GGCTTGTGCCAGACAGAAGCACCTCTGACCTAATGC...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTTGCCAGTCATCTTTATaGTTTACTTTTCTCACTGAT +
Preference number: 2 (lower is better)
Translates to: GGCILREGLGLAWTHDHSCQSSL*FTFLTD
Trigger: ATCAGTGAGAAAAGTAAACCATAAAGATGACTGGCA...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCTCAGCTTTCCACAGGTaGACCAGAGCAAGACGGAGG +
Preference number: 2 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMISAFHR*TRARRR
Trigger: CCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGA...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCGCAGGTCTGGGCAGCTaGCTCATGGCTCTTGAACTT +
Preference number: 2 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIAGLGS*LMALEL
Trigger: AAGTTCAAGAGCCATGAGGCAGCTGCCCAGACCTGC...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp GGCAACTTCCGACTTCCACTATCAACCATTTCATCTTGTGTCACCTaGCCTTTTCCTTGCCAAAGTTGCAGGGATAGGAAAACACATGTG +
Preference number: 2 (lower is better)
Translates to: GNFRLPLSTISSCVT*PFPCQSCRDRKTHV
Trigger: CACATGTGTTTTCCTATCCCTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGAAATGGTTGATAGTGGAAGTCGGAAGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 90 bp AGCTTTGTCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATaGTCAGTTTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: SFVTPKTSAVPGCLS*SVFLPAVLHIPVFS
Trigger: GCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCCAAGCAGCAGACAAATaGGTCCAAAGCAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGQAADK*VQSRKL
Trigger: AAGCTTCCTGCTTTGGACCCATTTGTCTGCTGCTTG...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGATTTCTAGATTTCCTTaGTCAAAGTATGACTCCTTC +
Preference number: 2 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALISRFP*SKYDSF
Trigger: GAAGGAGTCATACTTTGACCAAGGAAATCTAGAAAT...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR TCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCGCAGAGTATCAGCTGTaGCCATCCCATTTCACAGAC +
Preference number: 2 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIAEYQL*PSHFTD
Trigger: GTCTGTGAAATGGGATGGTCACAGCTGATACTCTGC...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR GCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATTTTCCTTGCCAAAGTTaGAGGGATAGGAAAACACAT +
Preference number: 2 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDFPCQS*RDRKTH
Trigger: ATGTGTTTTCCTATCCCTGCAACTTTGGCAAGGAAA...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCTGTGGCTTCTTTTCATaGAGTCAATGTAGCTATCCG +
Preference number: 2 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGCGFFS*SQCSYP
Trigger: CGGATAGCTACATTGACTCCATGAAAAGAAGCCACA...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCGACTTCTGCTGTTCCTaGTTGCTTATCATTGTCAGT +
Preference number: 2 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIDFCCS*LLIIVS
Trigger: ACTGACAATGATAAGCAACCAGGAACAGCAGAAGTC...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCATGGGTGGCTGTATATaGAGGGAGGGTCTGGGACTG +
Preference number: 3 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLMGGCI*REGLGL
Trigger: CAGTCCCAGACCCTCCCTCAATATACAGCCACCCAT...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GGCTGGTTCTTGGCTCCCTGGGTTATCATTCTCCGCTaGGGATGGAGAAGCAGCCCTGAGGTAGAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: GWFLAPWVIILR*GWRSSPEVEGR
Trigger: TCTACCCTCTACCTCAGGGCTGCTTCTCCATCCCCAGCGGAGAATGATAACCCAGGGAGCCAAGAACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp TATCAGGGCCAGGGAAGAGGACTGCCTGTCCCAGAGTaGCAGAGTCCTCTAGCTCCAAGCTTTGTCACCCCA +
Preference number: 3 (lower is better)
Translates to: YQGQGRGLPVPE*QSPLAPSFVTP
Trigger: TGGGGTGACAAAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGGCCCTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp CATAGTCACAGCCTTGCAGCTGAAGAGGGACATGGGTaGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTG +
Preference number: 3 (lower is better)
Translates to: HSHSLAAEEGHG*LYIEGGSGTGL
Trigger: CAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACCCATGTCCCTCTTCAGCTGCAAGGCTGTGACTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp GACTCCTTCTCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCACCATGGCCTGATATaGGGTACCACCCTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: DSFSFCFLLYFCMWPWAPHHGLI*GTTLQV
Trigger: AACCTGCAGGGTGGTACCCAATATCAGGCCATGGTG...GGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp TCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTaGGCTCCCCATCAGGCCTTTTGGACACATGTCCCC +
Preference number: 3 (lower is better)
Translates to: SFCFLLYFCMWP*APHQAFWTHVP
Trigger: GGGGACATGTGTCCAAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GGAACTGGATTACAAGCTGTTGTGAGCCACCCAGTGTaGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCT +
Preference number: 3 (lower is better)
Translates to: GTGLQAVVSHPV*VLGTKQRGHLS
Trigger: AGAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACAGCTTGTAATCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp GCATCAAATCCCGTGGAACTGGATTACAAGCTGTTGTaGGCCACCCAGTGTGGGTGCTGGGAACCAAACAGC +
Preference number: 3 (lower is better)
Translates to: ASNPVELDYKLL*ATQCGCWEPNS
Trigger: GCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACAGCTTGTAATCCAGTTCCACGGGATTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GGTGGAGGCACAGCTAGTATTGACAGAAGTCATAGGTaGAACCCAAGTGGCAGAGGAAGTGTCTCCACCAGG +
Preference number: 3 (lower is better)
Translates to: GGGTASIDRSHR*NPSGRGSVSTR
Trigger: CCTGGTGGAGACACTTCCTCTGCCACTTGGGTTCCACCTATGACTTCTGTCAATACTAGCTGTGCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTCTGATGTTGAGTGCTTaGAAGGCTGAAAGTGGTACA +
Preference number: 3 (lower is better)
Translates to: PGKRTACPRVAESSSSKLLMLSA*KAESGT
Trigger: TGTACCACTTTCAGCCTTCAAAGCACTCAACATCAG...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCACCTCTGCCTATCCTTaGCCTAAAACTCATTCTGCT +
Preference number: 3 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLTSAYP*PKTHSA
Trigger: AGCAGAATGAGTTTTAGGCAAAGGATAGGCAGAGGT...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp CCTGCTATCAGCTCCGGCAGCATCAGTCAAAAGCTTTaGCACATGGGAGATCCACTGAAGGCCTTAAAGGAC +
Preference number: 3 (lower is better)
Translates to: PAISSGSISQKL*HMGDPLKALKD
Trigger: GTCCTTTAAGGCCTTCAGTGGATCTCCCATGTGGCAAAGCTTTTGACTGATGCTGCCGGAGCTGATAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp ACCATCCCTGCAGCTGAGGACAACAGAGAAAAGATCTaGTCTGGCATTAGGTCAGAGGTGCTTCTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: TIPAAEDNREKI*SGIRSEVLLSG
Trigger: GCCAGACAGAAGCACCTCTGACCTAATGCCAGACCAGATCTTTTCTCTGTTGTCCTCAGCTGCAGGGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GGGGCTACTACTGAGGAACTCCTAGACAGGGCTCTCTaGAGGAGAGAGGTGAGGTGTGTCTTTAGTTCTCAA +
Preference number: 3 (lower is better)
Translates to: GATTEELLDRAL*RREVRCVFSSQ
Trigger: TTGAGAACTAAAGACACACCTCACCTCTCTCCTCCAGAGAGCCCTGTCTAGGAGTTCCTCAGTAGTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp AGTCTGGATGTTCCTGCCTTTCCAAGAACCCAGATATaGGAAGCCCCAGCAATATGGCCCTCTAAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: SLDVPAFPRTQI*EAPAIWPSKVS
Trigger: GCTGACCTTAGAGGGCCATATTGCTGGGGCTTCCCATATCTGGGTTCTTGGAAAGGCAGGAACATCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp AGGTTCATTCTTCTCCTGGCCTGGAAAAGTGCCCAATaGCAGCCCATCAAGATGAGCAGAATTGGGCACACC +
Preference number: 3 (lower is better)
Translates to: RFILLLAWKSAQ*QPIKMSRIGHT
Trigger: GGTGTGCCCAATTCTGCTCATCTTGATGGGCTGCCATTGGGCACTTTTCCAGGCCAGGAGAAGAATGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp ACAAGGGGTAGAGGTTTTGGTCCAAATGCCAGACTCTaGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: TRGRGFGPNARL*NCQGNWLSCPC
Trigger: GCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCCAGAGTCTGGCATTTGGACCAAAACCTCTACCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGGTCAGGTCCCTGATGTaGAGTGCTTTGAAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALVRSLM*SALKAE
Trigger: TTCAGCCTTCAAAGCACTCAACATCAGGGACCTGAC...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTATCAACCATTTCATCTaGTGTCACCTTGCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PGKRTACPRVAESSSSKLINHFI*CHLAFS
Trigger: GGAAAAGGCAAGGTGACACAAGATGAAATGGTTGAT...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCGCTTACAGAGCTGTGTaGCAGGGAGGGGAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGAYRAV*QGGEGA
Trigger: GGCTCCCTCCCCTCCCTGCAACACAGCTCTGTAAGC...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCGTCTCCACCAGGCCCTaGCCTCTGATGGGAAAGGGT +
Preference number: 3 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGVSTRP*PLMGKG
Trigger: ACCCTTTCCCATCAGAGGCAAGGGCCTGGTGGAGAC...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTTTCTGCTGTTCCTGGTaGCTTATCATTGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: PGKRTACPRVAESSSSKLFCCSW*LIIVSF
Trigger: AAAACTGACAATGATAAGCAACCAGGAACAGCAGAA...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGTGCAGATGCCAGATGTaGGTCGGAGTAAAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: GTVKETGCPVPASASRVLCRCQM*VGVKKV
Trigger: AACCTTCTTTACTCCGACCAACATCTGGCATCTGCA...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GATACCAGGACAGCACAAATTATCAGCAGGTGCCCATaGCAAGTCTGGATGTTCCTGCCTTTCCAAGAACCC +
Preference number: 3 (lower is better)
Translates to: DTRTAQIISRCP*QVWMFLPFQEP
Trigger: GGGTTCTTGGAAAGGCAGGAACATCCAGACTTGCCATGGGCACCTGCTGATAATTTGTGCTGTCCTGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GTATGTATGGAGGCCAGTAGAGGGCATCAAATCCCGTaGAACTGGATTACAAGCTGTTGTGAGCCACCCAGT +
Preference number: 3 (lower is better)
Translates to: VCMEASRGHQIP*NWITSCCEPPS
Trigger: ACTGGGTGGCTCACAACAGCTTGTAATCCAGTTCCACGGGATTTGATGCCCTCTACTGGCCTCCATACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGTCATCTTGTGTCACCTaGCCTTTTCCTTGCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GTVKETGCPVPASASRVLSSCVT*PFPCQS
Trigger: ACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGA...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp ACTAGAAACTTTCTTTCCATGGCAGTGTCCCTGTACTaGTCTGAGCTTAGCACACTCCTGTCCCAGGATCCT +
Preference number: 3 (lower is better)
Translates to: TRNFLSMAVSLY*SELSTLLSQDP
Trigger: AGGATCCTGGGACAGGAGTGTGCTAAGCTCAGAGCAGTACAGGGACACTGCCATGGAAAGAAAGTTTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp AGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATaGCCTGATATTGGGTACCACCCTGCAGGTTATCAG +
Preference number: 3 (lower is better)
Translates to: SSPSYSSLQQPP*PDIGYHPAGYQ
Trigger: CTGATAACCTGCAGGGTGGTACCCAATATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp AGTCAGCCCTCCTACCTACTAGAAACTTTCTTTCCATaGCAGTGTCCCTGTACTGCTCTGAGCTTAGCACAC +
Preference number: 3 (lower is better)
Translates to: SQPSYLLETFFP*QCPCTALSLAH
Trigger: GTGTGCTAAGCTCAGAGCAGTACAGGGACACTGCCATGGAAAGAAAGTTTCTAGTAGGTAGGAGGGCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp CTCAATCCTGGAAGATGGCAGCCAGCTCCATTCACATaGCACACTCATTCAGAAAATGCACTCTGGGGTCTA +
Preference number: 3 (lower is better)
Translates to: LNPGRWQPAPFT*HTHSENALWGL
Trigger: TAGACCCCAGAGTGCATTTTCTGAATGAGTGTGCCATGTGAATGGAGCTGGCTGCCATCTTCCAGGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGCCTGGTTGCTTATCATaGTCAGTTTTCCTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEPGCLS*SVFLPA
Trigger: TGCTGGAAGGAAAACTGACAATGATAAGCAACCAGG...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGGTAACTTCAGAAGGGTaGTGCTTCTGTTCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: CILREGLGLAWTHDHSLKVTSEG*CFCSGN
Trigger: ATTCCCAGAACAGAAGCACAACCCTTCTGAAGTTAC...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp TCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTaGTATTGGGTACCACCCTGCAGGTTATCAGCTACA +
Preference number: 3 (lower is better)
Translates to: SFIFQSSATTMA*YWVPPCRLSAT
Trigger: TGTAGCTGATAACCTGCAGGGTGGTACCCAATATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp TTGGGTACATTAGTCATGGCTAGCAGTCTGGGATTATaGGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAG +
Preference number: 3 (lower is better)
Translates to: LGTLVMASSLGL*AKAQLSTGEPE
Trigger: CTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCAGACTGCTAGCCATGACTAATGTACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp ATCATCCAGGTTCTTACAGCAGCAGAGTATCAGCTGTaGCCATCCCATTTCACAGACTGGCAAGTCTCAAGG +
Preference number: 3 (lower is better)
Translates to: IIQVLTAAEYQL*PSHFTDWQVSR
Trigger: CCTTGAGACTTGCCAGTCTGTGAAATGGGATGGTCACAGCTGATACTCTGCTGCTGTAAGAACCTGGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GAGGCCTTGAGACTAACTAGAATAATACCTCAATCCTaGAAGATGGCAGCCAGCTCCATTCACATGGCACAC +
Preference number: 3 (lower is better)
Translates to: EALRLTRIIPQS*KMAASSIHMAH
Trigger: GTGTGCCATGTGAATGGAGCTGGCTGCCATCTTCCAGGATTGAGGTATTATTCTAGTTAGTCTCAAGGCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp TTGGCTTTTCCTATTTGGGCTTGGAGGATGGGTAGATaGTTGGGTACATTAGTCATGGCTAGCAGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: LAFPIWAWRMGR*LGTLVMASSLG
Trigger: TCCCAGACTGCTAGCCATGACTAATGTACCCAACCATCTACCCATCCTCCAAGCCCAAATAGGAAAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp TCTTTACTGTTCCTACTAAAGTTTAGTCTAGTAGGATaGAGTGGGAAGAGGCCCTGCCCTGCAGGACAGGTA +
Preference number: 3 (lower is better)
Translates to: SLLFLLKFSLVG*SGKRPCPAGQV
Trigger: TACCTGTCCTGCAGGGCAGGGCCTCTTCCCACTTCATCCTACTAGACTAAACTTTAGTAGGAACAGTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp AGATTTCCTTGGTCAAAGTATGACTCCTTCTCATTCTaGTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: RFPWSKYDSFSF*FLLYFCMWPWA
Trigger: AGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTCATACTTTGACCAAGGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp TACCACCCTGCAGGTTATCAGCTACACTCCCATATCTaGGGACATACTTTCTTTCTCACTCAAGGCAACTTC +
Preference number: 3 (lower is better)
Translates to: YHPAGYQLHSHI*GHTFFLTQGNF
Trigger: GAAGTTGCCTTGAGTGAGAAAGAAAGTATGTCCCCAGATATGGGAGTGTAGCTGATAACCTGCAGGGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR-3UTR CAA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCGAGGCACAGCTAGTATaGACAGAAGTCATAGGTGGA +
Preference number: 3 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFEAQLV*TEVIGG
Trigger: TCCACCTATGACTTCTGTCAATACTAGCTGTGCCTC...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp GTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATaGTCATCCAGGTTCTTACAGCAGCAGAGTATCAGC +
Preference number: 3 (lower is better)
Translates to: VCRSYPVTQTFK*SSRFLQQQSIS
Trigger: GCTGATACTCTGCTGCTGTAAGAACCTGGATGATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp TCATCTTGTGTCACCTTGCCTTTTCCTTGCCAAAGTTaGAGGGATAGGAAAACACATGTGTACTTTGGTCGG +
Preference number: 3 (lower is better)
Translates to: SSCVTLPFPCQS*RDRKTHVYFGR
Trigger: CCGACCAAAGTACACATGTGTTTTCCTATCCCTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp AGCTTTGTCACCCCAAAGACTTCTGCTGTTCCTGGTTaGTTATCATTGTCAGTTTTCCTTCCAGCAGTCCTT +
Preference number: 3 (lower is better)
Translates to: SFVTPKTSAVPG*LSLSVFLPAVL
Trigger: AAGGACTGCTGGAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp TCCTCTAGCTCCAAGCTTTGTCACCCCAAAGACTTCTaGTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: SSSSKLCHPKDF*CSWLLIIVSFP
Trigger: AGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCTTGGAGCTAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp TGTATCTCTGTTAAGTGTGTGTGTACCATGTATGTATaGAGGCCAGTAGAGGGCATCAAATCCCGTGGAACT +
Preference number: 3 (lower is better)
Translates to: CISVKCVCTMYV*RPVEGIKSRGT
Trigger: AGTTCCACGGGATTTGATGCCCTCTACTGGCCTCCATACATACATGGTACACACACACTTAACAGAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR TCA 72 bp AGCAGAATTGGGCACACCAGCTCCTGGGGTTATTCATaGAATGATCCTGAAATGAGTTTGTCAGAGAAGGTA +
Preference number: 3 (lower is better)
Translates to: SRIGHTSSWGYS*NDPEMSLSEKV
Trigger: TACCTTCTCTGACAAACTCATTTCAGGATCATTTCATGAATAACCCCAGGAGCTGGTGTGCCCAATTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp TCAACAACTTTCAACACAAACACATTCAGATCTCCCTaGCCTACCTTAAGAGCCTTAGGCAATGACAGCTTC +
Preference number: 3 (lower is better)
Translates to: STTFNTNTFRSP*PTLRALGNDSF
Trigger: GAAGCTGTCATTGCCTAAGGCTCTTAAGGTAGGGCAGGGAGATCTGAATGTGTTTGTGTTGAAAGTTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp GTTGTGCTTCTGTTCTGGGAATGTGGCTTCTTTTCATaGAGTCAATGTAGCTATCCGCAAAATCCAGACAGA +
Preference number: 3 (lower is better)
Translates to: VVLLFWECGFFS*SQCSYPQNPDR
Trigger: TCTGTCTGGATTTTGCGGATAGCTACATTGACTCCATGAAAAGAAGCCACATTCCCAGAACAGAAGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR GCA 72 bp TCAACCATTTCATCTTGTGTCACCTTGCCTTTTCCTTaGCAAAGTTGCAGGGATAGGAAAACACATGTGTAC +
Preference number: 3 (lower is better)
Translates to: STISSCVTLPFP*QSCRDRKTHVY
Trigger: GTACACATGTGTTTTCCTATCCCTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGAAATGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CCA 72 bp CATTACCCAGACCCTCATGTGATTTCTAGATTTCCTTaGTCAAAGTATGACTCCTTCTCATTCTGCTTCCTG +
Preference number: 3 (lower is better)
Translates to: HYPDPHVISRFP*SKYDSFSFCFL
Trigger: CAGGAAGCAGAATGAGAAGGAGTCATACTTTGACCAAGGAAATCTAGAAATCACATGAGGGTCTGGGTAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCGGGGTCCTGGGCTCATaGGGATGTAGACACTCTGGG +
Preference number: 4 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLGVLGS*GCRHSG
Trigger: CCCAGAGTGTCTACATCCCCATGAGCCCAGGACCCC...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCAGTCTCAGACCCTGTaGGGCTGCTCTTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGCILREGLGLAWTHDHSQSQTL*GCSWCG
Trigger: GCCACACCAAGAGCAGCCTCACAGGGTCTGAGACTG...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp AGAGGAAGTGTCTCCACCAGGCCCTTGCCTCTGATGGGAAAGGGTCAGGTCCCTCCAAGTGGGTCAAAGTaGTGGGGTCCTGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: RGSVSTRPLPLMGKGQVPPSGSK*WGPGLM
Trigger: CATGAGCCCAGGACCCCATCACTTTGACCCACTTGG...AGGGACCTGACCCTTTCCCATCAGAGGCAAGGGCCTGGTGGAGACACTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTATGATGTGGATGGCTTaGGGTGAGGGCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLMMWMA*GEGLGS
Trigger: GCTCCCCAAGCCCTCACCGCAAGCCATCCACATCAT...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTGAAGGTTCGGAGGACTaGCGCACATCTGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLEGSED*RTSVHS
Trigger: GGAGTGGACAGATGTGCGGCAGTCCTCCGAACCTTC...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTGGAGCTGAACTCAGCTaGAGAAGAGCGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLGAELS*RRAGTM
Trigger: CATGGTCCCCGCTCTTCTCCAGCTGAGTTCAGCTCC...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGCTGCCTGACTTGGCTTaGGTGGCCGGGGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKLPDLA*VAGVGE
Trigger: CTCCCCCACCCCGGCCACCCAAGCCAAGTCAGGCAG...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp GACTCCTTCTCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCTTCTGCCGGGTGCCCTaGGAGAAGCTGGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: DSFSFCFLLYFCMWPWAPFCRVP*EKLALL
Trigger: AAGGAGTGCCAGCTTCTCTCAGGGCACCCGGCAGAA...GGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGCGGCTGGGGCCTCTGTaGATAGGAAGGGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GTVKETGCPVPASASRVLRLGPL*IGRAVD
Trigger: GTCCACAGCCCTTCCTATTCACAGAGGCCCCAGCCG...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp AGAGGAAGTGTCTCCACCAGGCCCTTGCCTCTGATGGGAAAGGGTCAGGTCCCTACATCTGTCCACTCCTaGATGGTGTTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGSVSTRPLPLMGKGQVPTSVHS*MVFCRA
Trigger: GGCCCTGCAGAACACCATGCAGGAGTGGACAGATGT...AGGGACCTGACCCTTTCCCATCAGAGGCAAGGGCCTGGTGGAGACACTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGCTTGCGGTGAGGGCTTaGGGAGCCCGGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTELAVRA*GARLEV
Trigger: GACTTCCAGCCGGGCTCCCCAAGCCCTCACCGCAAG...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp CCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCATCAGGCCTTTTGGACACAGGGACCATGACTGGCTaGAGAAAGGTTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PAVLLHVALGSPSGLLDTGTMTG*RKVPQG
Trigger: TCCCTGAGGAACCTTTCTTCAGCCAGTCATGGTCCC...TGTGTCCAAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp AGAGGAAGTGTCTCCACCAGGCCCTTGCCTCTGATGGGAAAGGGTCAGGTCCCTGTTGAAGGTCAGGCCTaGATCCACCTGCTCACACAA +
Preference number: 4 (lower is better)
Translates to: RGSVSTRPLPLMGKGQVPVEGQA*IHLLTQ
Trigger: TTGTGTGAGCAGGTGGATGCAGGCCTGACCTTCAAC...AGGGACCTGACCCTTTCCCATCAGAGGCAAGGGCCTGGTGGAGACACTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp AGAGGAAGTGTCTCCACCAGGCCCTTGCCTCTGATGGGAAAGGGTCAGGTCCCTGAGATACTCCTGAGGTaGACTGGTGGACAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGSVSTRPLPLMGKGQVPEILLR*TGGQGR
Trigger: CCTACCTTGTCCACCAGTGCACCTCAGGAGTATCTC...AGGGACCTGACCCTTTCCCATCAGAGGCAAGGGCCTGGTGGAGACACTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCAGCGGGGACCATGACTaGCTGAAGAAAGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLSGDHD*LKKGSS
Trigger: TGAGGAACCTTTCTTCAGCCAGTCATGGTCCCCGCT...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCGGAAGCCAGGCTCCGTaGGAGATCATAAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLGSQAP*EIISTV
Trigger: GACAGTACTTATGATCTCCCACGGAGCCTGGCTTCC...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGAGGCTGCTCTTGGTGTaGCCATGGGAAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALRLLLV*PWEARL
Trigger: GAGCCTGGCTTCCCATGGCCACACCAAGAGCAGCCT...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCAAAGTGATGGGGTCCTaGGCTCATGGGGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLKVMGS*AHGDVD
Trigger: GTCTACATCCCCATGAGCCCAGGACCCCATCACTTT...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp AATGGAGAAAGAGGTGACAGAAGAGGCAGGTCTGGGCAGCTGCCTCATGGCTCTTTGACCGGGGGTGGCTaGATTTCACTTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: NGERGDRRGRSGQLPHGSLTGGG*ISLPRL
Trigger: CAGCCGAGGAAGTGAAATCCAGCCACCCCCGGTCAA...AGAGCCATGAGGCAGCTGCCCAGACCTGCCTCTTCTGTCACCTCTTTCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTTGCCCTGAGAGAAGCTaGCACTCCTTGCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLCPERS*HSLHFL
Trigger: CAGAAAATGCAAGGAGTGCCAGCTTCTCTCAGGGCA...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGGTTCAGCAGACCAGCTaGCACTTTCCCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALVQQTS*HFPHCL
Trigger: GAGGCAGTGGGGAAAGTGCCAGCTGGTCTGCTGAAC...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTACTCTTCTTTGGAGCTaGGCTGTTAGTGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GGCILREGLGLAWTHDHSTLLWS*AVSATG
Trigger: CCCAGTGGCACTAACAGCCCAGCTCCAAAGAAGAGT...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGACAGCTTGGCACCCTTaGAAGGTTCGGAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: GTVKETGCPVPASASRVLTAWHP*KVRRTA
Trigger: GGCAGTCCTCCGAACCTTCCAAGGGTGCCAAGCTGT...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGTCTCGGAGCAGGTGCTaGCTGGAGCTGAACTCAGCT +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKSRSRC*LELNSA
Trigger: AGCTGAGTTCAGCTCCAGTCAGCACCTGCTCCGAGA...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp AATGGAGAAAGAGGTGACAGAAGAGGCAGGTCTGGGCAGCTGCCTCATGGCTCTAGACTTGGTGACAGGTaGCTTGAAGGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: NGERGDRRGRSGQLPHGSRLGDR*LEGQLI
Trigger: GATGAGCTGCCCTTCAAGTCACCTGTCACCAAGTCT...AGAGCCATGAGGCAGCTGCCCAGACCTGCCTCTTCTGTCACCTCTTTCTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTTCCGCAGGGGTTTCTTaGAGTGCTCATTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLSAGVS*SAHSCS
Trigger: ACTACAAGAATGAGCACTCCAAGAAACCCCTGCGGA...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTGTGAATAAAGTAGGCTaGCTAGAGTGTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLVNKVG*LECEGA
Trigger: AGCCCCTTCACACTCTAGCCAGCCTACTTTATTCAC...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp GACTCCTTCTCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCGCCAGTACTCTTCTTTaGAGCTGGGCTGTTAGTGCC +
Preference number: 4 (lower is better)
Translates to: DSFSFCFLLYFCMWPWAPASTLL*SWAVSA
Trigger: GGCACTAACAGCCCAGCTCCAAAGAAGAGTACTGGC...GGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGAAGAGCGGGGACCATaGCTGGCTGAAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEEERGP*LAEERF
Trigger: GAACCTTTCTTCAGCCAGTCATGGTCCCCGCTCTTC...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCCGAGATAATCCACACTaGCAGTACTCTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLRDNPH*QYSSLE
Trigger: CTCCAAAGAAGAGTACTGGCAGTGTGGATTATCTCG...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGAAGGTAGGCTGCATGTaGCTTGACACAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKKVGCM*LDTGGS
Trigger: TGAGCCCCCTGTGTCAAGCCACATGCAGCCTACCTT...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp GTCTGTCTCCTCCATGGACCCACCTCTGCCTATCCTTaGCCTAAAACTCATTCTGCTCCCTCCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VCLLHGPTSAYP*PKTHSAPSLRL
Trigger: AAGCCTCAAGGAGGGAGCAGAATGAGTTTTAGGCAAAGGATAGGCAGAGGTGGGTCCATGGAGGAGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp CCCTGCTATCAGCTCCGGCAGCATCAGTCAAAAGCTTaGCCACATGGGAGATCCACTGAAGGCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: PCYQLRQHQSKA*PHGRSTEGLKG
Trigger: TCCTTTAAGGCCTTCAGTGGATCTCCCATGTGGCAAAGCTTTTGACTGATGCTGCCGGAGCTGATAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CCAGGGAAGAGGACTGCCTGTCCCAGAGTGGCAGAGTCCTCTAGCTCCAAGCTTACTGTCATGGCATTGTaGTTCTTGTCCAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PGKRTACPRVAESSSSKLTVMAL*FLSSVK
Trigger: TTTCACACTGGACAAGAACCACAATGCCATGACAGT...AAGCTTGGAGCTAGAGGACTCTGCCACTCTGGGACAGGCAGTCCTCTTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGTCTCTTCAGCCTGATTaGAGCCGCAGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKSLQPD*SRRSGR
Trigger: TCTGCCAGATCTGCGGCTTCAATCAGGCTGAAGAGA...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGTGTTGCTGGGCATCTTaGAGGTGTACACATCCTCGT +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKCCWAS*RCTHPR
Trigger: ACGAGGATGTGTACACCTTCAAGATGCCCAGCAACA...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCTGGGGGAGCTATGGCTaGATCTCCAGGAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFWGSYG*ISRSGH
Trigger: GTGGCCACTCCTGGAGATTCAGCCATAGCTCCCCCA...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp GACTCCTTCTCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCTGTCCTTCTGCTTATaGACTGGTGCAAGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: DSFSFCFLLYFCMWPWAPLSFCL*TGASRD
Trigger: ATCTCTACTTGCACCAGTGCATAAGCAGAAGGACAG...GGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGAAGGGGTGTTGGCTTTaGTTTTCTGTCAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GTVKETGCPVPASASRVLKGCWL*FSVRLE
Trigger: CTCAAGCCTGACAGAAAAGCAAAGCCAACACCCCTT...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGGTATTCCAGAACATCTaGATCTCCACTCATTCGGCC +
Preference number: 4 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALVFQNI*ISTHSA
Trigger: GGCCGAATGAGTGGAGATCCAGATGTTCTGGAATAC...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp GGAACTGTCAAGGAAACTGGCTGTCCTGTCCCTGCTTCAGCTTCTAGAGTGCTGCAGTGTCCATTGCTCTaGGCAAGTTTTTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GTVKETGCPVPASASRVLQCPLL*ASFCTA
Trigger: AGCTGTGCAAAAACTTGCCCAGAGCAATGGACACTG...CAGCACTCTAGAAGCTGAAGCAGGGACAGGACAGCCAGTTTCCTTGACAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGCAGGTCAAGGGGTGTTaGCTTTGCTTTTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEQVKGC*LCFSVR
Trigger: CCTGACAGAAAAGCAAAGCCAACACCCCTTGACCTG...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp CAGCTCCTAACTAAGGTGGTGGAGGCACAGCTAGTATaGACAGAAGTCATAGGTGGAACCCAAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QLLTKVVEAQLV*TEVIGGTQVAE
Trigger: CTCTGCCACTTGGGTTCCACCTATGACTTCTGTCAATACTAGCTGTGCCTCCACCACCTTAGTTAGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp ATAGGAAAACACATGTGTACTTTGGTCGGCTGGTTCTaGGCTCCCTGGGTTATCATTCTCCGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: IGKHMCTLVGWF*APWVIILRWGW
Trigger: CCATCCCCAGCGGAGAATGATAACCCAGGGAGCCAAGAACCAGCCGACCAAAGTACACATGTGTTTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp CATATTCCAGTCTTCAGCAACCACCATGGCCTGATATaGGGTACCACCCTGCAGGTTATCAGCTACACTCCC +
Preference number: 4 (lower is better)
Translates to: HIPVFSNHHGLI*GTTLQVISYTP
Trigger: GGGAGTGTAGCTGATAACCTGCAGGGTGGTACCCAATATCAGGCCATGGTGGTTGCTGAAGACTGGAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp GGGATTACAGGTGTGCACCACTGCAGATGCCAGATGTaGGTCGGAGTAAAGAAGGTTCATTCTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GITGVHHCRCQM*VGVKKVHSSPG
Trigger: GCCAGGAGAAGAATGAACCTTCTTTACTCCGACCAACATCTGGCATCTGCAGTGGTGCACACCTGTAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATAGGCCTGCATCCACCTaGTCACACAAGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDRPAST*SHKFRL
Trigger: CAACCTGAACTTGTGTGAGCAGGTGGATGCAGGCCT...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATCCATTGAGGTGTTTCTaGCTGACTTGGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDPLRCF*LTWLGW
Trigger: CCACCCAAGCCAAGTCAGGCAGAAACACCTCAATGG...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGTGTGTCGGCTTGGCTTaGGAAGGCTATAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKCVGLA*EGYRSH
Trigger: ATGGCTTCTATAGCCTTCCCAAGCCAAGCCGACACA...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGTGTATTGTGTCGGCTTaGCTTGGGAAGGCTATAGAA +
Preference number: 4 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALCIVSA*LGKAIE
Trigger: TTCTATAGCCTTCCCAAGCCAAGCCGACACAATACA...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGAGGCTGAGAGAGGAGTaGTTGGGACATCCATATTGT +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKRLREE*LGHPYC
Trigger: ACAATATGGATGTCCCAACCACTCCTCTCTCAGCCT...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCGGACGGGTAGCCAAGTaGGTCAAAGTGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFGRVAK*VKVMGS
Trigger: GGACCCCATCACTTTGACCCACTTGGCTACCCGTCC...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp CCCAACATCCAGCTCTTTCTGTTCATAGTCACAGCCTaGCAGCTGAAGAGGGACATGGGTGGCTGTATATTG +
Preference number: 4 (lower is better)
Translates to: PNIQLFLFIVTA*QLKRDMGGCIL
Trigger: CAATATACAGCCACCCATGTCCCTCTTCAGCTGCAAGGCTGTGACTATGAACAGAAAGAGCTGGATGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGCCTTCTCATCTGATGTaGCAGATGATGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKPSHLM*QMMWMA
Trigger: AGCCATCCACATCATCTGTCACATCAGATGAGAAGG...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGATCTGGCAGATGCTCTaGACCCACTTATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEIWQML*THLFMS
Trigger: TGACATGAATAAGTGGGTCCAGAGCATCTGCCAGAT...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCGGGGTGGGGGAGCTATaGCTGAATCTCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIGVGEL*LNLQEW
Trigger: CCACTCCTGGAGATTCAGCCATAGCTCCCCCACCCC...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp GCCAAAGTTGCAGGGATAGGAAAACACATGTGTACTTaGGTCGGCTGGTTCTTGGCTCCCTGGGTTATCATT +
Preference number: 4 (lower is better)
Translates to: AKVAGIGKHMCT*VGWFLAPWVII
Trigger: AATGATAACCCAGGGAGCCAAGAACCAGCCGACCAAAGTACACATGTGTTTTCCTATCCCTGCAACTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCGCAGCTCTTTCTTGTTaGAGGTCAGGCCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFAALSC*RSGLHP
Trigger: TGGATGCAGGCCTGACCTTCAACAAGAAAGAGCTGC...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCAGGGATCTGGTAGGCTaGGAGAGGAGTGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIRDLVG*ERSGWD
Trigger: GTCCCAACCACTCCTCTCTCAGCCTACCAGATCCCT...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATGAGGTCTTTGCTGAATaGTGCCCCATTGAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDEVFAE*CPIEVF
Trigger: AAACACCTCAATGGGGCAGCATTCAGCAAAGACCTC...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATACTGGGAACAGGGGATaGAGATACTGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDTGNRG*RYWVLH
Trigger: ATGCAAAACCCAGTATCTGCATCCCCTGTTCCCAGT...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGCATAAGTACTGTCTTTaGATTCTGTATTGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEHKYCL*ILYCVG
Trigger: GCCGACACAATACAGAATTCAAAGACAGTACTTATG...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGATCTGCTATTTTCGCTaGTTGGAGGTCTTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKICYFR*LEVFAE
Trigger: TTCAGCAAAGACCTCCAATCAGCGAAAATAGCAGAT...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGGCTATTTTCGCTGATTaGAGGTCTTTGCTGAATGCT +
Preference number: 4 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKAIFAD*RSLLNA
Trigger: AGCATTCAGCAAAGACCTCCAATCAGCGAAAATAGC...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp GCTTTTCCTATTTGGGCTTGGAGGATGGGTAGATGGTaGGGTACATTAGTCATGGCTAGCAGTCTGGGATTA +
Preference number: 4 (lower is better)
Translates to: AFPIWAWRMGRW*GTLVMASSLGL
Trigger: TAATCCCAGACTGCTAGCCATGACTAATGTACCCAACCATCTACCCATCCTCCAAGCCCAAATAGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGAACACAAAACTATCCTaGAGCTCTTTCTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CILREGLGLAWTHDHSLKNTKLS*SSFLLK
Trigger: CTTCAACAAGAAAGAGCTGCAGGATAGTTTTGTGTT...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCAAGAACCTGGGTTCATaGGCACGTAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGKNLGS*ARSCHQ
Trigger: CTGATGACAACTACGTGCCCATGAACCCAGGTTCTT...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp AGGCAACTTCCGACTTCCACTATCAACCATTTCATCTaGTGTCACCTTGCCTTTTCCTTGCCAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RQLPTSTINHFI*CHLAFSLPKLQ
Trigger: CTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGAAATGGTTGATAGTGGAAGTCGGAAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp AAGCTTTGTCACCCCAAAGACTTCTGCTGTTCCTGGTaGCTTATCATTGTCAGTTTTCCTTCCAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KLCHPKDFCCSW*LIIVSFPSSSP
Trigger: AGGACTGCTGGAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGACAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCGAGTGGCCACTGTCATaGCATTGTGGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMIEWPLS*HCGSCP
Trigger: TGGACAAGAACCACAATGCCATGACAGTGGCCACTC...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
3UTR CAA 72 bp CGACTTCCACTATCAACCATTTCATCTTGTGTCACCTaGCCTTTTCCTTGCCAAAGTTGCAGGGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: RLPLSTISSCVT*PFPCQSCRDRK
Trigger: TTTCCTATCCCTGCAACTTTGGCAAGGAAAAGGCAAGGTGACACAAGATGAAATGGTTGATAGTGGAAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR TCA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCTGCGCTCGCTGGTCTTaGTATCAAACACAAAACTAT +
Preference number: 4 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGCARWS*YQTQNY
Trigger: ATAGTTTTGTGTTTGATATCAAGACCAGCGAGCGCA...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR GCA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCCTCTGGGCAAGTTTTTaGACAGCTGTATCACTCTTC +
Preference number: 4 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMILWASF*TAVSLF
Trigger: GAAGAGTGATACAGCTGTGCAAAAACTTGCCCAGAG...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS GCA 90 bp TCCTGGAGGTTCAGCAGACCAGCTGGCACTTTCCCCACTGCCTCGTaGCGGGTACTCGTAGGTCTCACAGGAAGAAGCTCGATGGAGTCG +
Preference number: 5 (lower is better)
Translates to: SWRFSRPAGTFPTAS*RVLVGLTGRSSMES
Trigger: CGACTCCATCGAGCTTCTTCCTGTGAGACCTACGAGTACCCGGCACGAGGCAGTGGGGAAAGTGCCAGCTGGTCTGCTGAACCTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCTCCCGACACAGGGTGTaGCTGGGCATCTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLSRHRV*LGILKV
Trigger: CACCTTCAAGATGCCCAGCAACACCCTGTGTCGGGA...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS GCA 90 bp CAGTCTTTCCTGGAGGTTCAGCAGACCAGCTGGCACTTTCCCCACTaGCTCGTGCCGGGTACTCGTAGGTCTCACAGGAAGAAGCTCGAT +
Preference number: 5 (lower is better)
Translates to: QSFLEVQQTSWHFPH*LVPGTRRSHRKKLD
Trigger: ATCGAGCTTCTTCCTGTGAGACCTACGAGTACCCGGCACGAGGCAGTGGGGAAAGTGCCAGCTGGTCTGCTGAACCTCCAGGAAAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp CACCTGCTACTGTCTTCCCTACTCTGTTTCATCTCATTATCAGGGCCAGGGAAGGCTTGCGGTGAGGGCTaGGGGAGCCCGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: HLLLSSLLCFISLSGPGKACGEG*GSPAGS
Trigger: ACTTCCAGCCGGGCTCCCCAAGCCCTCACCGCAAGC...CTTCCCTGGCCCTGATAATGAGATGAAACAGAGTAGGGAAGACAGTAGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS CCA 90 bp TGCATGTGGCTTGACACAGGGGGCTCAAACGTGAATAAAGTAGGCTaGCTAGAGTGTGAAGGGGCTGAGGACTTCCGTTCTCGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CMWLDTGGSNVNKVG*LECEGAEDFRSRSR
Trigger: CCTGCTCCGAGAACGGAAGTCCTCAGCCCCTTCACACTCTAGCCAGCCTACTTTATTCACGTTTGAGCCCCCTGTGTCAAGCCACATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp CCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCATCAGGCCTTTTGGACACATGCAGCTCTTTCTTGTaGAAGGTCAGGCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: PAVLLHVALGSPSGLLDTCSSFL*KVRPAS
Trigger: GGATGCAGGCCTGACCTTCAACAAGAAAGAGCTGCA...TGTGTCCAAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTGCTGATTGGAGGTCTTaGCTGAATGCTGCCCCATTG +
Preference number: 5 (lower is better)
Translates to: GGCILREGLGLAWTHDHSADWRS*LNAAPL
Trigger: CAATGGGGCAGCATTCAGCAAAGACCTCCAATCAGC...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGGGCTTGAGGTTTCGGTaGACCGGGGGTGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: CILREGLGLAWTHDHSLKGLRFR*TGGGWI
Trigger: AATCCAGCCACCCCCGGTCAACCGAAACCTCAAGCC...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS CCA 90 bp GTCCAGGGCGAGATAATCCACACTGCCAGTACTCTTCTTTGGAGCTaGGCTGTTAGTGCCACTGGGAACAGGGGATGCAGATACTGGGTT +
Preference number: 5 (lower is better)
Translates to: VQGEIIHTASTLLWS*AVSATGNRGCRYWV
Trigger: AACCCAGTATCTGCATCCCCTGTTCCCAGTGGCACTAACAGCCCAGCTCCAAAGAAGAGTACTGGCAGTGTGGATTATCTCGCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp TGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTCTTAAGCGATGGAGTCGGCTGTaGTCCATTGCAGGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: CILREGLGLAWTHDHSLKRWSRL*SIAGRV
Trigger: TACCCTCCCTGCAATGGACAACAGCCGACTCCATCG...CTTAAGAGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp CCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCCATCAGGCCTTTTGGACACATCAGGTCAAGGGGTGTaGGCTTTGCTTTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: PAVLLHVALGSPSGLLDTSGQGV*ALLFCQ
Trigger: CTGACAGAAAAGCAAAGCCAACACCCCTTGACCTGA...TGTGTCCAAAAGGCCTGATGGGGAGCCCAAGGCCACATGCAGAAGTACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS TCA 90 bp ACCTGGGTTCATGGGCACGTAGTTGTCATCAGAGCTGGCACTATTTaGTCGACCTACGGCAGTCTTTCCTGGAGGTTCAGCAGACCAGCT +
Preference number: 5 (lower is better)
Translates to: TWVHGHVVVIRAGTI*STYGSLSWRFSRPA
Trigger: AGCTGGTCTGCTGAACCTCCAGGAAAGACTGCCGTAGGTCGATCAAATAGTGCCAGCTCTGATGACAACTACGTGCCCATGAACCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp GGGAAGAGGCCCTGCCCTGCAGGACAGGTACTTGTGGGAGCTATGCTAAGAGGTGTGCGCTCGCTGGTCTaGATATCAAACACAAAACTA +
Preference number: 5 (lower is better)
Translates to: GKRPCPAGQVLVGAMLRGVRSLV*ISNTKL
Trigger: TAGTTTTGTGTTTGATATCAAGACCAGCGAGCGCAC...ACCTCTTAGCATAGCTCCCACAAGTACCTGTCCTGCAGGGCAGGGCCTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp AATGGAGAAAGAGGTGACAGAAGAGGCAGGTCTGGGCAGCTGCCTCATGGCTCTCTGAGAGAGGAGTGGTaGGGACATCCATATTGTCCA +
Preference number: 5 (lower is better)
Translates to: NGERGDRRGRSGQLPHGSLREEW*GHPYCP
Trigger: TGGACAATATGGATGTCCCAACCACTCCTCTCTCAG...AGAGCCATGAGGCAGCTGCCCAGACCTGCCTCTTCTGTCACCTCTTTCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp GACTCCTTCTCATTCTGCTTCCTGCTGTACTTCTGCATGTGGCCTTGGGCTCCCATCCTGGACCAAGACTaGGTGACAGGTGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: DSFSFCFLLYFCMWPWAPILDQD*VTGDLK
Trigger: CTTCAAGTCACCTGTCACCAAGTCTTGGTCCAGGAT...GGGAGCCCAAGGCCACATGCAGAAGTACAGCAGGAAGCAGAATGAGAAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp GGTGGCTGTATATTGAGGGAGGGTCTGGGACTGGCCTGGACCCACGATCATTCTTTAAAGGTGTGGCTGTaGATCCTGGACCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: GGCILREGLGLAWTHDHSLKVWL*ILDQDL
Trigger: CAAGTCTTGGTCCAGGATCAACAGCCACACCTTTAA...AGAATGATCGTGGGTCCAGGCCAGTCCCAGACCCTCCCTCAATATACAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGAGAAGCTGGCACTCCTaGCATTTTCTGTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALRSWHS*HFLSFC
Trigger: GCAGAAGGACAGAAAATGCAAGGAGTGCCAGCTTCT...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TGTTGTGAGCCACCCAGTGTGGGTGCTGGGAACCAAACAGCGCGGTCATCTCTCCTTCTCTTTATCCACTaGGACATAGTCTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: CCEPPSVGAGNQTARSSLLLFIH*DIVYLL
Trigger: GAGAAGGTAGACTATGTCCAAGTGGATAAAGAGAAG...GAGAGATGACCGCGCTGTTTGGTTCCCAGCACCCACACTGGGTGGCTCACAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS TCA 90 bp GGCCATGGGAAGCCAGGCTCCGTGGGAGATCATAAGTACTGTCTTTaGATTCTGTATTGTGTCGGCTTGGCTTGGGAAGGCTATAGAAGC +
Preference number: 5 (lower is better)
Translates to: GHGKPGSVGDHKYCL*ILYCVGLAWEGYRS
Trigger: GCTTCTATAGCCTTCCCAAGCCAAGCCGACACAATACAGAATTCAAAGACAGTACTTATGATCTCCCACGGAGCCTGGCTTCCCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGCTGTATTGTGTCGGCTaGGCTTGGGAAGGCTATAGA +
Preference number: 5 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTELYCVG*AWEGYR
Trigger: TCTATAGCCTTCCCAAGCCAAGCCGACACAATACAG...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGTTGGGACATCCATATaGTCCACAAGGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEVGTSI*STRRSP
Trigger: TGGAGACCTCCTTGTGGACAATATGGATGTCCCAAC...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCTCTGGGCAAGTTTTaGCACAGCTGTATCACTCTT +
Preference number: 5 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTEALGKF*HSCITL
Trigger: AAGAGTGATACAGCTGTGCAAAAACTTGCCCAGAGC...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGGCCTTGTCTTTGAATTCTGTATaGTGTCGGCTTGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: YEPKLSFPQVNQSKTEALSLNSV*CRLGLG
Trigger: TCCCAAGCCAAGCCGACACAATACAGAATTCAAAGA...CAAGGCCTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp AATGGAGAAAGAGGTGACAGAAGAGGCAGGTCTGGGCAGCTGCCTCATGGCTCTATGGCATTGTGGTTCTaGTCCAGTGTGAAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: NGERGDRRGRSGQLPHGSMALWF*SSVKVL
Trigger: TAGAACTTTCACACTGGACAAGAACCACAATGCCAT...AGAGCCATGAGGCAGCTGCCCAGACCTGCCTCTTCTGTCACCTCTTTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCTACAGCTTGGCACCCTaGGAAGGTTCGGAGGACTGC +
Preference number: 5 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFYSLAP*EGSEDC
Trigger: GCAGTCCTCCGAACCTTCCAAGGGTGCCAAGCTGTA...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS TCA 90 bp ATTGTGGTTCTTGTCCAGTGTGAAAGTTCTAGGGATCTGGTAGGCTaGGAGAGGAGTGGTTGGGACATCCATATTGTCCACAAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: IVVLVQCESSRDLVG*ERSGWDIHIVHKEV
Trigger: GACCTCCTTGTGGACAATATGGATGTCCCAACCACTCCTCTCTCAGCCTACCAGATCCCTAGAACTTTCACACTGGACAAGAACCACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS-3UTR CAA 90 bp TGGGATTATGAGCCAAAGCTCAGCTTTCCACAGGTGAACCAGAGCAAGACGGAGTTGATACAGTGTCCATaGCTCTGGGCAAGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: WDYEPKLSFPQVNQSKTELIQCP*LWASFC
Trigger: GCAAAAACTTGCCCAGAGCAATGGACACTGTATCAA...CTCCGTCTTGCTCTGGTTCACCTGTGGAAAGCTGAGCTTTGGCTCATAATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCATAGAAGCCATGGACTaGACCTCCGACGCCGTTGAT +
Preference number: 5 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGIEAMD*TSDAVD
Trigger: ATCAACGGCGTCGGAGGTCAAGTCCATGGCTTCTAT...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp ACTTTATTGTCCTGCTTCTACACCATAATAAAAAGGGACCTGCAAGCTCCAGGCGTGTTGCTGGGCATCTaGAAGGTGTACACATCCTCG +
Preference number: 5 (lower is better)
Translates to: TLLSCFYTIIKRDLQAPGVLLGI*KVYTSS
Trigger: CGAGGATGTGTACACCTTCAAGATGCCCAGCAACAC...GCCTGGAGCTTGCAGGTCCCTTTTTATTATGGTGTAGAAGCAGGACAATAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TTTCCTTCCAGCAGTCCTTCATATTCCAGTCTTCAGCAACCACCATGGCCTGATTCATCGATGACAGTGTaGTTTCTCAGGTCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: FPSSSPSYSSLQQPPWPDSSMTV*FLRSRG
Trigger: ACCCCTTGACCTGAGAAACAACACTGTCATCGATGA...ATCAGGCCATGGTGGTTGCTGAAGACTGGAATATGAAGGACTGCTGGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp TCACCCCAAAGACTTCTGCTGTTCCTGGTTGCTTATCATTGTCAGTTTTCCTTCTCACACAAGTTCAGGTaGATGATCCGCAGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPQRLLLFLVAYHCQFSFSHKFR*MIRRGF
Trigger: GAAACCCCTGCGGATCATCAACCTGAACTTGTGTGA...GAAGGAAAACTGACAATGATAAGCAACCAGGAACAGCAGAAGTCTTTGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS-3UTR CAA 90 bp AAGCTAATGTTCTGTGTGCCGCTCTTATCCAGTAACTCAGACTTTCAAATGATCTTGGTGACAGGTGACTaGAAGGGCAGCTCATCGATG +
Preference number: 5 (lower is better)
Translates to: KLMFCVPLLSSNSDFQMILVTGD*KGSSSM
Trigger: CATCGATGAGCTGCCCTTCAAGTCACCTGTCACCAA...GATCATTTGAAAGTCTGAGTTACTGGATAAGAGCGGCACACAGAACATTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004622.7
CDS CCA 72 bp CTACGGCAGTCTTTCCTGGAGGTTCAGCAGACCAGCTaGCACTTTCCCCACTGCCTCGTGCCGGGTACTCGT +
Preference number: 6 (lower is better)
Translates to: LRQSFLEVQQTS*HFPHCLVPGTR
Trigger: ACGAGTACCCGGCACGAGGCAGTGGGGAAAGTGCCAGCTGGTCTGCTGAACCTCCAGGAAAGACTGCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS GCA 72 bp TTCAGCAGACCAGCTGGCACTTTCCCCACTGCCTCGTaGCGGGTACTCGTAGGTCTCACAGGAAGAAGCTCG +
Preference number: 6 (lower is better)
Translates to: FSRPAGTFPTAS*RVLVGLTGRSS
Trigger: CGAGCTTCTTCCTGTGAGACCTACGAGTACCCGGCACGAGGCAGTGGGGAAAGTGCCAGCTGGTCTGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp AGCCAAGTGGGTCAAAGTGATGGGGTCCTGGGCTCATaGGGATGTAGACACTCTGGGAGTTGTCCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: SQVGQSDGVLGS*GCRHSGSCPLV
Trigger: GACCAGGGGACAACTCCCAGAGTGTCTACATCCCCATGAGCCCAGGACCCCATCACTTTGACCCACTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp GGACGGGTAGCCAAGTGGGTCAAAGTGATGGGGTCCTaGGCTCATGGGGATGTAGACACTCTGGGAGTTGTC +
Preference number: 6 (lower is better)
Translates to: GRVAKWVKVMGS*AHGDVDTLGVV
Trigger: GACAACTCCCAGAGTGTCTACATCCCCATGAGCCCAGGACCCCATCACTTTGACCCACTTGGCTACCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp GCTCATGGGGATGTAGACACTCTGGGAGTTGTCCCCTaGTCGTTCCATAGCCAGCAGGGTAGAAGAACCTGG +
Preference number: 6 (lower is better)
Translates to: AHGDVDTLGVVP*SFHSQQGRRTW
Trigger: CCAGGTTCTTCTACCCTGCTGGCTATGGAACGACCAGGGGACAACTCCCAGAGTGTCTACATCCCCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp CAGGGCGAGATAATCCACACTGCCAGTACTCTTCTTTaGAGCTGGGCTGTTAGTGCCACTGGGAACAGGGGA +
Preference number: 6 (lower is better)
Translates to: QGEIIHTASTLL*SWAVSATGNRG
Trigger: TCCCCTGTTCCCAGTGGCACTAACAGCCCAGCTCCAAAGAAGAGTACTGGCAGTGTGGATTATCTCGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 90 bp ACCTCCGACGCCGTTGATACAGTGTCCATTGCTCTGGGCAAGTTTTaGCACAGCTGTATCACTCTTCTGCCGGGTGCCCTGAGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: TSDAVDTVSIALGKF*HSCITLLPGALREA
Trigger: AGCTTCTCTCAGGGCACCCGGCAGAAGAGTGATACAGCTGTGCAAAAACTTGCCCAGAGCAATGGACACTGTATCAACGGCGTCGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 72 bp GTCAGGCCTGCATCCACCTGCTCACACAAGTTCAGGTaGATGATCCGCAGGGGTTTCTTGGAGTGCTCATTC +
Preference number: 6 (lower is better)
Translates to: VRPASTCSHKFR*MIRRGFLECSF
Trigger: GAATGAGCACTCCAAGAAACCCCTGCGGATCATCAACCTGAACTTGTGTGAGCAGGTGGATGCAGGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 72 bp GCCGTTGATACAGTGTCCATTGCTCTGGGCAAGTTTTaGCACAGCTGTATCACTCTTCTGCCGGGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: AVDTVSIALGKF*HSCITLLPGAL
Trigger: CAGGGCACCCGGCAGAAGAGTGATACAGCTGTGCAAAAACTTGCCCAGAGCAATGGACACTGTATCAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 90 bp ACAAGGAGGTCTCCAAGTTCCCGACACAGGGTGTTGCTGGGCATCTaGAAGGTGTACACATCCTCGTTATCAGTCTCAGACCCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: TRRSPSSRHRVLLGI*KVYTSSLSVSDPVR
Trigger: CCTCACAGGGTCTGAGACTGATAACGAGGATGTGTACACCTTCAAGATGCCCAGCAACACCCTGTGTCGGGAACTTGGAGACCTCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 90 bp AACCTGGGTTCATGGGCACGTAGTTGTCATCAGAGCTGGCACTATTaGATCGACCTACGGCAGTCTTTCCTGGAGGTTCAGCAGACCAGC +
Preference number: 6 (lower is better)
Translates to: NLGSWARSCHQSWHY*IDLRQSFLEVQQTS
Trigger: GCTGGTCTGCTGAACCTCCAGGAAAGACTGCCGTAGGTCGATCAAATAGTGCCAGCTCTGATGACAACTACGTGCCCATGAACCCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS TCA 72 bp CTCCAAGTTCCCGACACAGGGTGTTGCTGGGCATCTTaGAGGTGTACACATCCTCGTTATCAGTCTCAGACC +
Preference number: 6 (lower is better)
Translates to: LQVPDTGCCWAS*RCTHPRYQSQT
Trigger: GGTCTGAGACTGATAACGAGGATGTGTACACCTTCAAGATGCCCAGCAACACCCTGTGTCGGGAACTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp CTTGACACAGGGGGCTCAAACGTGAATAAAGTAGGCTaGCTAGAGTGTGAAGGGGCTGAGGACTTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: LDTGGSNVNKVG*LECEGAEDFRS
Trigger: AGAACGGAAGTCCTCAGCCCCTTCACACTCTAGCCAGCCTACTTTATTCACGTTTGAGCCCCCTGTGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 90 bp TGGGAGGAACTGGAGTTAAAGGTGTGGTTGATCCTGGACCAAGACTaGGTGACAGGTGACTTGAAGGGCAGCTCATCGATGACAGTGTTG +
Preference number: 6 (lower is better)
Translates to: WEELELKVWLILDQD*VTGDLKGSSSMTVL
Trigger: CAACACTGTCATCGATGAGCTGCCCTTCAAGTCACCTGTCACCAAGTCTTGGTCCAGGATCAACCACACCTTTAACTCCAGTTCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206791.2
CDS TCA 72 bp GGTGTGGTTGATCCTGGACCAAGACTTGGTGACAGGTaGCTTGAAGGGCAGCTCATCGATGACAGTGTTGTT +
Preference number: 6 (lower is better)
Translates to: GVVDPGPRLGDR*LEGQLIDDSVV
Trigger: AACAACACTGTCATCGATGAGCTGCCCTTCAAGTCACCTGTCACCAAGTCTTGGTCCAGGATCAACCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206791.2
CDS GCA 72 bp CAAGTTTTTGCACAGCTGTATCACTCTTCTGCCGGGTaGCCTGAGAGAAGCTGGCACTCCTTGCATTTTCTG +
Preference number: 6 (lower is better)
Translates to: QVFAQLYHSSAG*PERSWHSLHFL
Trigger: CAGAAAATGCAAGGAGTGCCAGCTTCTCTCAGGGCACCCGGCAGAAGAGTGATACAGCTGTGCAAAAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS GCA 72 bp GACAGTGTTGTTTCTCAGGTCAAGGGGTGTTGGCTTTaGTTTTCTGTCAGGCTTGAGGTTTCGGTTGACCGG +
Preference number: 6 (lower is better)
Translates to: DSVVSQVKGCWL*FSVRLEVSVDR
Trigger: CCGGTCAACCGAAACCTCAAGCCTGACAGAAAAGCAAAGCCAACACCCCTTGACCTGAGAAACAACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp AACCTGGGTTCATGGGCACGTAGTTGTCATCAGAGCTaGCACTATTTGATCGACCTACGGCAGTCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: NLGSWARSCHQS*HYLIDLRQSFL
Trigger: CAGGAAAGACTGCCGTAGGTCGATCAAATAGTGCCAGCTCTGATGACAACTACGTGCCCATGAACCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 72 bp TCTCCAAGTTCCCGACACAGGGTGTTGCTGGGCATCTaGAAGGTGTACACATCCTCGTTATCAGTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: SPSSRHRVLLGI*KVYTSSLSVSD
Trigger: GTCTGAGACTGATAACGAGGATGTGTACACCTTCAAGATGCCCAGCAACACCCTGTGTCGGGAACTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 72 bp TCATGGGCACGTAGTTGTCATCAGAGCTGGCACTATTaGATCGACCTACGGCAGTCTTTCCTGGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: SWARSCHQSWHY*IDLRQSFLEVQ
Trigger: CTGAACCTCCAGGAAAGACTGCCGTAGGTCGATCAAATAGTGCCAGCTCTGATGACAACTACGTGCCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS TCA 72 bp AAGCCAGGCTCCGTGGGAGATCATAAGTACTGTCTTTaGATTCTGTATTGTGTCGGCTTGGCTTGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: KPGSVGDHKYCL*ILYCVGLAWEG
Trigger: GCCTTCCCAAGCCAAGCCGACACAATACAGAATTCAAAGACAGTACTTATGATCTCCCACGGAGCCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CAA 72 bp AGCTACAGATCTGCTATTTTCGCTGATTGGAGGTCTTaGCTGAATGCTGCCCCATTGAGGTGTTTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SYRSAIFADWRS*LNAAPLRCFCL
Trigger: CAGGCAGAAACACCTCAATGGGGCAGCATTCAGCAAAGACCTCCAATCAGCGAAAATAGCAGATCTGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS CCA 72 bp GATAGTAGCAGCTACAGATCTGCTATTTTCGCTGATTaGAGGTCTTTGCTGAATGCTGCCCCATTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: DSSSYRSAIFAD*RSLLNAAPLRC
Trigger: ACACCTCAATGGGGCAGCATTCAGCAAAGACCTCCAATCAGCGAAAATAGCAGATCTGTAGCTGCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2
CDS TCA 72 bp TATCAAACACAAAACTATCCTGCAGCTCTTTCTTGTTaGAGGTCAGGCCTGCATCCACCTGCTCACACAAGT +
Preference number: 6 (lower is better)
Translates to: YQTQNYPAALSC*RSGLHPPAHTS
Trigger: ACTTGTGTGAGCAGGTGGATGCAGGCCTGACCTTCAACAAGAAAGAGCTGCAGGATAGTTTTGTGTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000004622.7
ENSMUST00000206791.2