Pregenerated sensors for G6PDX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031400Ensembl transcript IDs: ENSMUST00000004327.11, ENSMUST00000143521.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTTGACCATCGGCTGGAAGGGAGGTaGTTCAGGTCTTGTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: CLPSFGKEAAHRWDEVDHRLEGR*FRSCGK Trigger: CTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCG...ATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTTGACCATTGGGTTTACTGGTGGTaGCAGTGGCAGCAGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: CLPSFGKEAAHRWDEVDHWVYWW*QWQQHR Trigger: CCTATGCTGCTGCCACTGCCACCACCAGTAAACCCA...ATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGAAGATGCAGAAAGGGTaGCCAGAAGAGGCAGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: CSGWKGGDSGLVERWVAQKMQKG*PEEAEY Trigger: ATACTCTGCCTCTTCTGGCCACCCTTTCTGCATCTT...CTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGGTCATTGTCCCTTGTAGCTGGGTTTACTaGTGGTGGCAGTGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VLRSLPIASGKSGLVIVPCSWVY*WWQWQQ Trigger: CTGCTGCCACTGCCACCACCAGTAAACCCAGCTACA...AGGGACAATGACCAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTTTTGAGGAATGTAGCTaGGTTTACTGGTGGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FCSGWKGGDSGLVERWVAFEECS*VYWWWQ Trigger: CTGCCACCACCAGTAAACCCAGCTACATTCCTCAAA...AGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CCA 90 bp | AGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTAGCACTGAGGCTAGGTCTTGTGGAAAGATaGGTGGCTCAGATAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SMRSLPSGEEECLVALRLGLVER*VAQIGP Trigger: TGGCCCTATCTGAGCCACCCATCTTTCCACAAGACC...TAGCCTCAGTGCTACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCACATAGGTCCTGAAACCCTACAATaGGTTTTAAATGCCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: MSSSTEASVAMGRSSHIGPETLQ*VLNAWY Trigger: ATACCAGGCATTTAAAACTCATTGTAGGGTTTCAGG...ACCTATGTGAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR CCA 72 bp | GGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATaGGTGGCTCAGATAGGGCCAGTGGTGGCCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: GWKGGDSGLVER*VAQIGPVVALK Trigger: TTTCAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCCACTTCCTTCAAGTTTaGAGGAGCTTGCCCATAGCC | + |
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Preference number: 3 (lower is better) Translates to: EEECLVALRLVWPWAGPLHFLQV*RSLPIA Trigger: GGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTG...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR CCA 72 bp | TTTGAGGAATGTAGCTGGGTTTACTGGTGGTGGCAGTaGCAGCAGCATAGGACAAAATGGCGGTCCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FEECSWVYWWWQ*QQHRTKWRSKP Trigger: GGGCTTGGACCGCCATTTTGTCCTATGCTGCTGCCACTGCCACCACCAGTAAACCCAGCTACATTCCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR TCA 72 bp | TGTGGCCATGGGCAGGTCCTCTCACATAGGTGTCCTTaGCCACTTCCTTCAAGTTTTGAGGAGCTTGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: CGHGQVLSHRCP*PLPSSFEELAH Trigger: ATGGGCAAGCTCCTCAAAACTTGAAGGAAGTGGTCAAGGACACCTATGTGAGAGGACCTGCCCATGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR CCA 72 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTaGGATGAGGTTGACCATGGAGTATGGAATTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CLPSFGKEAAHR*DEVDHGVWNWS Trigger: TGACCAATTCCATACTCCATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTTTAAATGCCTGGTATTaGAGGAATGTAGCTGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: FCSGWKGGDSGLVERWVALNAWY*RNVAGF Trigger: AAACCCAGCTACATTCCTCAAATACCAGGCATTTAA...AGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR-3UTR CAA 90 bp | ATATTGCTAGGCAGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTACAAGTTTTGAGGAGCTaGCCCATAGCCTCTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ILLGSMRSLPSGEEECLVQVLRS*PIASGK Trigger: CTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTG...TACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCTGCCTAGCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR TCA 72 bp | AATATTGCTAGGCAGCATGAGGTCTCTTCCATCTGGTaGGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: NIARQHEVSSIW*GGMSSSTEASV Trigger: CACACTAGCCTCAGTGCTACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCTGCCTAGCAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR TCA 72 bp | TCAGATAGGGCCAGTGGTGGCCCTGAAACCCTACAATaGGTTTTAAATGCCTGGTATTTGAGGAATGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SDRASGGPETLQ*VLNAWYLRNVA Trigger: AGCTACATTCCTCAAATACCAGGCATTTAAAACTCATTGTAGGGTTTCAGGGCCACCACTGGCCCTATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGGGCCAGTGGTGGCCCTGAGGATCCCACACACCTaGGTCCGGCTCAGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DSGLVERWVAQIGPVVALRIPHT*VRLRAT Trigger: GGTGGCCCTGAGCCGGACCCAGGTGTGTGGGATCCT...CAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTTTCCACAAGACCTGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCGCCTGCATCCCCTGGTaGAGGGCATTCATGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EEECLVALRLVWPWAGPLACIPW*RAFMWL Trigger: CAGCCACATGAATGCCCTGCACCAGGGGATGCAGGC...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCCTTCATCAGCTCATCTaGCTCTGTGGGGCCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: EEECLVALRLVWPWAGPLLHQLI*LCGAAA Trigger: AGCCGCGGCCCCACAGAGGCAGATGAGCTGATGAAG...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GGCCTAAGGCTCCTCCCCATTGTTCCTAACTCCTTAAGGAGTCCAGGGGCAGACACTGCCTCATTGGGCTaGACACGGATGACCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLRLLPIVPNSLRSPGADTASLG*TRMTSS Trigger: TGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGT...GTCTGCCCCTGGACTCCTTAAGGAGTTAGGAACAATGGGGAGGAGCCTTAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGCAAAAGTGGCAGTGGTaGACCCATGGGGTACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSGWKGGDSGLVERWVAQQKWQW*THGVLW Trigger: CCACAGTACCCCATGGGTCCACCACTGCCACTTTTG...CTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TTCTGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGCTGCTGCAAAAGTaGCAGTGGTGGACCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: FCSGWKGGDSGLVERWVAQLLQK*QWWTHG Trigger: CCCATGGGTCCACCACTGCCACTTTTGCAGCAGCTG...AGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGGGCCAGTGGTGGCCCTGCCAGGTAGTGGTCAATaGGGTAGATCTGGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: DSGLVERWVAQIGPVVALPGSGQ*GRSGPH Trigger: GTGAGGACCAGATCTACCGCATTGACCACTACCTGG...CAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTTTCCACAAGACCTGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCAAGAAGGGCTCACTCTaGTTTCGGATGTCGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: EEECLVALRLVWPWAGPLKKGSL*FRMSST Trigger: AGTGGACGACATCCGAAAGCAGAGTGAGCCCTTCTT...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | TGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGCATCTTGGTGTATACTaGCTCATTGGGCTGCACACG | + |
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Preference number: 4 (lower is better) Translates to: CSGWKGGDSGLVERWVAQHLGVY*LIGLHT Trigger: CGTGTGCAGCCCAATGAGGCAGTATACACCAAGATG...CTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | CACTTCCTTCAAGTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGCTGTGGGGCCGCGGCTaGCATATACATAGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: HFLQVLRSLPIASGKSGLLWGRG*HIHRGW Trigger: CCATCCCCTATGTATATGGCAGCCGCGGCCCCACAG...CAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGGGCCAGTGGTGGCCCTGATGTGTGTATCAGCTTaGTGGAAGGCATCACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: DSGLVERWVAQIGPVVALMCVSA*WKASPW Trigger: CCAGGGTGATGCCTTCCACCAAGCTGATACACACAT...CAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTTTCCACAAGACCTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGGGCCAGTGGTGGCCCTGGGTTCGACAGTTGATTaGAGCTCTGTAGGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: DSGLVERWVAQIGPVVALGSTVD*SSVGLS Trigger: GGAGAGACCTACAGAGCTCCAATCAACTGTCGAACC...CAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTTTCCACAAGACCTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GGCCTAAGGCTCCTCCCCATTGTTCCTAACTCCTTAAGGAGTCCAGGGGCAGACCTTCTCCTTCTCCATTaGGGTTCCCCACATATTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLRLLPIVPNSLRSPGADLLLLH*GSPHIG Trigger: GCCAATATGTGGGGAACCCCAATGGAGAAGGAGAAG...GTCTGCCCCTGGACTCCTTAAGGAGTTAGGAACAATGGGGAGGAGCCTTAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR CAA 72 bp | CCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTaGACCATGGAGTATGGAATTGGTCAGGGGACATCT | + |
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Preference number: 4 (lower is better) Translates to: PLVRRLPIGGMR*TMEYGIGQGTS Trigger: AGATGTCCCCTGACCAATTCCATACTCCATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | TTCTGCAGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTGGGCATAGCCCACAATaGAGGTATCTTCAGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: FCSGWKGGDSGLVERWVAGHSPQ*RYLQVE Trigger: TTCTACCTGAAGATACCTTCATTGTGGGCTATGCCC...AGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCTGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | AGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATACATTCATGTGGCTGTTaGGGTGCTTATAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGWKGGDSGLVERWVAQIHSCGC*GAYRRL Trigger: CAGCCTCCTATAAGCACCTCAACAGCCACATGAATG...TATCTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | ATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCACATAGGTGTGCTTATAGGAGGCTaGATCATCATACTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MSSSTEASVAMGRSSHIGVLIGG*IIILAS Trigger: GCTGGCCAGTATGATGATGCAGCCTCCTATAAGCAC...ACCTATGTGAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | AGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGATAGATCTTCTTCTTaGCCAGGTCACCCGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: SGWKGGDSGLVERWVAQIDRSSS*PGHPMH Trigger: GTGCATCGGGTGACCTGGCCAAGAAGAAGATCTATC...TATCTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | AGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTAGCACTGAGGCTACTGCTTCATAGACTGTaGGGGGCAAGGCCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SMRSLPSGEEECLVALRLLLHRL*GARPGR Trigger: TCTACCTGGCCTTGCCCCCCACAGTCTATGAAGCAG...TAGCCTCAGTGCTACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | GCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATATGTGCAGCAGTGGTGTaGAGATACGCCAGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: AQELECVSKAYGPKVLPICAAVV*RYARLP Trigger: GGGAAGCCTGGCGTATCTTCACACCACTGCTGCACA...TATTGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTTGACCATACCAGACACAACATCTaGAGGAGGTGGTTCTGCATA | + |
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Preference number: 4 (lower is better) Translates to: CLPSFGKEAAHRWDEVDHTRHNI*RRWFCI Trigger: TATGCAGAACCACCTCCTGCAGATGTTGTGTCTGGT...ATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GGTGAAAAGGGAAGATGCAGAAAGGGTGGCCAGAAGAGGCAGAGTATAGATGGTTGGAAGGCATCACCCTaGTACAACTCTTCCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GEKGRCRKGGQKRQSIDGWKASP*YNSSLR Trigger: CCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCA...ACCATCTATACTCTGCCTCTTCTGGCCACCCTTTCTGCATCTTCCCTTTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | ATATTGCTAGGCAGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTATTGGCCTGCATCCCCTaGTGCAGGGCATTCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: ILLGSMRSLPSGEEECLVLACIP*CRAFMW Trigger: CCACATGAATGCCCTGCACCAGGGGATGCAGGCCAA...TACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCTGCCTAGCAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TTGCCCATAGCCTCTGGGAAGTCTGGTTTGGTCATTGTCCCTTTGAGGCCTAAGTGTCTCGATTCCAGATaGGGCCAAAGATCCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPIASGKSGLVIVPLRPKCLDSR*GQRSCW Trigger: CCAACAGGATCTTTGGCCCCATCTGGAATCGAGACA...CTTAGGCCTCAAAGGGACAATGACCAAACCAGACTTCCCAGAGGCTATGGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GGTGAAAAGGGAAGATGCAGAAAGGGTGGCCAGAAGAGGCAGAGTATAGATGGTCGGACAAAGTGCATCTaGCTCCCACAGAAGACATCC | + |
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Preference number: 4 (lower is better) Translates to: GEKGRCRKGGQKRQSIDGRTKCI*LPQKTS Trigger: GGATGTCTTCTGTGGGAGCCAGATGCACTTTGTCCG...ACCATCTATACTCTGCCTCTTCTGGCCACCCTTTCTGCATCTTCCCTTTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGGTCATTGTCCCTCCAGCTCATTACGCTTaGACTGTTGGTGGAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: VLRSLPIASGKSGLVIVPPAHYA*TVGGRC Trigger: ACATCTTCCACCAACAGTGCAAGCGTAATGAGCTGG...AGGGACAATGACCAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | CACTTCCTTCAAGTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGTGTGTATCAGCTTGGTaGAAGGCATCACCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HFLQVLRSLPIASGKSGLCVSAW*KASPWY Trigger: GTACCAGGGTGATGCCTTCCACCAAGCTGATACACA...CAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | CACTTCCTTCAAGTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGTGGCAGGCTTTTCCATaGCCACCAGACACAACATCT | + |
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Preference number: 4 (lower is better) Translates to: HFLQVLRSLPIASGKSGLWQAFP*PPDTTS Trigger: AGATGTTGTGTCTGGTGGCCATGGAAAAGCCTGCCA...CAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATACGCTTGCACTGTTGGTaGAAGATGTCACCTGCCACG | + |
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Preference number: 4 (lower is better) Translates to: AQELECVSKAYGPKVLPIRLHCW*KMSPAT Trigger: CGTGGCAGGTGACATCTTCCACCAACAGTGCAAGCG...TATTGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| 3UTR CAA 72 bp | GGTGTCCTTGACCACTTCCTTCAAGTTTTGAGGAGCTaGCCCATAGCCTCTGGGAAGTCTGGTTTGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: GVLDHFLQVLRS*PIASGKSGLVI Trigger: AATGACCAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTGGTCAAGGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | CCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATATAGGGTTAGTCCACTGTGAGTCGTaGGCGGGCATAGCCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: PMVPKSFQYGVNSPNIGLVHCES*AGIAHN Trigger: ATTGTGGGCTATGCCCGCTCACGACTCACAGTGGAC...TAACCCTATATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | CCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATATAGGGTTAAGGGCTTCTCCACGATaGTGCGGTTCCAGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PMVPKSFQYGVNSPNIGLRASPR*CGSSLS Trigger: AGACAGGCTGGAACCGCATCATCGTGGAGAAGCCCT...TAACCCTATATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | CAAGCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATCACGGACATCATCTaGACCTGTAGTGGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQELECVSKAYGPKVLPITDII*TCSGRL Trigger: AAGCCTGCCACTACAGGTTCAGATGATGTCCGTGAT...TGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR TCA 90 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTTGACCATGTCAGTTTCCACCTCTaGGATACACTTCAACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLPSFGKEAAHRWDEVDHVSFHL*DTLQHF Trigger: AAAGTGTTGAAGTGTATCTCAGAGGTGGAAACTGAC...ATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | CACTTCCTTCAAGTTTTGAGGAGCTTGCCCATAGCCTCTGGGAAGTCTGGTTTGTGCAGGAGGTGGTTCTaGATAACATCCCTGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: HFLQVLRSLPIASGKSGLCRRWF*ITSLMI Trigger: GATCATCAGGGATGTTATGCAGAACCACCTCCTGCA...CAAACCAGACTTCCCAGAGGCTATGGGCAAGCTCCTCAAAACTTGAAGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCCATTCTTGTATCTGTTaGCATAAGTTAGATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEECLVALRLVWPWAGPLHSCIC*HKLDPA Trigger: AGCTGGATCTAACTTATGGCAACAGATACAAGAATG...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | ATATTGCTAGGCAGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTAGGGTTCCCCACATATTaGCCAAGGACCACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSMRSLPSGEEECLVGFPTY*PRTTLS Trigger: TGACAACGTGGTCCTTGGCCAATATGTGGGGAACCC...TACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCTGCCTAGCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TGCTTGCCTTCCTTTGGTAAGGAGGCTGCCCATAGGTGGGATGAGGTTGACCATTCTTGGTCATCATCTTaGTGTATACTGCCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSFGKEAAHRWDEVDHSWSSS*CILPHW Trigger: CCAATGAGGCAGTATACACCAAGATGATGACCAAGA...ATGGTCAACCTCATCCCACCTATGGGCAGCCTCCTTACCAAAGGAAGGCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCACAAACCTCAGCACCATaGGATTCTGGACCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQELECVSKAYGPKVLPQTSAP*DSGPSL Trigger: AAGAGATGGTCCAGAATCTCATGGTGCTGAGGTTTG...TGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TTGCCCATAGCCTCTGGGAAGTCTGGTTTGGTCATTGTCCCTTTGAGGCCTAAGACATGCCAGGCTTCTTaGTCATCATCTTGGTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LPIASGKSGLVIVPLRPKTCQAS*SSSWCI Trigger: TATACACCAAGATGATGACCAAGAAGCCTGGCATGT...CTTAGGCCTCAAAGGGACAATGACCAAACCAGACTTCCCAGAGGCTATGGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR GCA 90 bp | CCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATATAGGGTTAATAGAGGACAGCTGCTaGAAAAGTGGCAGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PMVPKSFQYGVNSPNIGLIEDSC*KSGSGG Trigger: TCCACCACTGCCACTTTTGCAGCAGCTGTCCTCTAT...TAACCCTATATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | TATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATAGCACCATGAGATTCTaGACCATCTCTTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLRPMVPKSFQYGVNSPNSTMRF*TISLPR Trigger: CCTGGGCAAAGAGATGGTCCAGAATCTCATGGTGCT...ATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGGCCTTAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR CCA 90 bp | CCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATATAGGGTTAAATCTTGTGCAGCAGTaGTGTGAAGATACGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PMVPKSFQYGVNSPNIGLNLVQQ*CEDTPG Trigger: GCCTGGCGTATCTTCACACCACTGCTGCACAAGATT...TAACCCTATATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATACTTAGGTCTTTCTTCTaGAGTGGCTTTAAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQELECVSKAYGPKVLPILRSFF*SGFKEG Trigger: CCCTTCTTTAAAGCCACTCCAGAAGAAAGACCTAAG...TATTGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CCA 90 bp | GCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATACATCTAAGTATCCATTaGCAGCTTCTCCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQELECVSKAYGPKVLPIHLSIH*QLLLLH Trigger: ATGGAGAAGGAGAAGCTGCCAATGGATACTTAGATG...TATTGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 90 bp | GTAGGTACCCTCGTACTGGAAGCCCACTCTCTTCATCAGCTCATCTaGCTCTGTGGGGCCGCGGCTGCCATATACATAGGGGATGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGTLVLEAHSLHQLI*LCGAAAAIYIGDGL Trigger: CAGCCCATCCCCTATGTATATGGCAGCCGCGGCCCCACAGAGGCAGATGAGCTGATGAAGAGAGTGGGCTTCCAGTACGAGGGTACCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CAA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCCGTTCATTCAGGGCTTaGCCACAGCGCAGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEECLVALRLVWPWAGPLRSFRA*PQRRMK Trigger: CTTCATCCTGCGCTGTGGCAAAGCCCTGAATGAACG...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 90 bp | GACGGTTGGCCTGCATCCCCTGGTGCAGGGCATTCATGTGGCTGTTaGGGTGCTTATAGGAGGCTGCATCATCATACTGGCCAGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: DGWPASPGAGHSCGC*GAYRRLHHHTGQLH Trigger: ATGTAGCTGGCCAGTATGATGATGCAGCCTCCTATAAGCACCTCAACAGCCACATGAATGCCCTGCACCAGGGGATGCAGGCCAACCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS-3UTR CAA 90 bp | AGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATAGGGGTTCCCCACATATaGGCCAAGGACCACGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGWKGGDSGLVERWVAQIGVPHI*AKDHVV Trigger: GACAACGTGGTCCTTGGCCAATATGTGGGGAACCCC...TATCTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS TCA 90 bp | GTTGATTGGAGCTCTGTAGGTCTCTCCCGAAGGGCTTCTCCACGATaGTGCGGTTCCAGCCTCTGGTCTGACTCATGCAGGTCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VDWSSVGLSRRASPR*CGSSLWSDSCRSLE Trigger: TTCAAGAGACCTGCATGAGTCAGACCAGAGGCTGGAACCGCATCATCGTGGAGAAGCCCTTCGGGAGAGACCTACAGAGCTCCAATCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143521.2 |
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| CDS CCA 90 bp | GGACAGCTGCTGCAAAAGTGGCAGTGGTGGACCCATGGGGTACTGTaGGGTCATCTAAGTATCCATTGGCAGCTTCTCCTTCTCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLLQKWQWWTHGVL*GHLSIHWQLLLLHW Trigger: CCAATGGAGAAGGAGAAGCTGCCAATGGATACTTAGATGACCCCACAGTACCCCATGGGTCCACCACTGCCACTTTTGCAGCAGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | TTGGGCTGCACACGGATGACCAGCTCATTACGCTTGCACTGTTGGTaGAAGATGTCACCTGCCACGTCTCGGAACTGCAGTCTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGCTRMTSSLRLHCW*KMSPATSRNCSLTS Trigger: TGAAGTGAGACTGCAGTTCCGAGACGTGGCAGGTGACATCTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CAA 90 bp | GAGGAGGAATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCTATGTGTGTATCAGCTaGGTGGAAGGCATCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EEECLVALRLVWPWAGPLYVCIS*VEGITL Trigger: CAGGGTGATGCCTTCCACCAAGCTGATACACACATA...GAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACATTCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 90 bp | GTTGATTGGAGCTCTGTAGGTCTCTCCCGAAGGGCTTCTCCACGATaGTGCGGTTCCAGCCTGTCTGACTCATGCAGGTCTCTTGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VDWSSVGLSRRASPR*CGSSLSDSCRSLEC Trigger: ACATTCAAGAGACCTGCATGAGTCAGACAGGCTGGAACCGCATCATCGTGGAGAAGCCCTTCGGGAGAGACCTACAGAGCTCCAATCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 90 bp | CCAGGCTTCTTGGTCATCATCTTGGTGTATACTGCCTCATTGGGCTaGACACGGATGACCAGCTCATTACGCTTGCACTGTTGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGFLVIILVYTASLG*TRMTSSLRLHCWWK Trigger: CTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCAAGAAGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 90 bp | TGGTCATCATCTTGGTGTATACTGCCTCATTGGGCTGCACACGGATaGCCAGCTCATTACGCTTGCACTGTTGGTGGAAGATGTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSSWCILPHWAAHG*PAHYACTVGGRCHL Trigger: CAGGTGACATCTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 90 bp | CACTCCGGACAAAGTGCATCTGGCTCCCACAGAAGACATCCAGGATaGGGCGTTCATAGGCATCAGGGAGCTTCACATTCTTGTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSGQSASGSHRRHPG*GVHRHQGASHSCIC Trigger: ACAGATACAAGAATGTGAAGCTCCCTGATGCCTATGAACGCCTCATCCTGGATGTCTTCTGTGGGAGCCAGATGCACTTTGTCCGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 90 bp | GATGACCAGCTCATTACGCTTGCACTGTTGGTGGAAGATGTCACCTaGCACGTCTCGGAACTGCAGTCTCACTTCAGCTTTGCGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DDQLITLALLVEDVT*HVSELQSHFSFAFI Trigger: AATGAACGCAAAGCTGAAGTGAGACTGCAGTTCCGAGACGTGGCAGGTGACATCTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | ATGATGATAAATATGTGTGTATCAGCTTGGTGGAAGGCATCACCCTaGTACAACTCTTCCCTCAGGATCCCACACACCTGGGTCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MMINMCVSAWWKASP*YNSSLRIPHTWVRL Trigger: GAGCCGGACCCAGGTGTGTGGGATCCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | CTGTGGGGTCATCTAAGTATCCATTGGCAGCTTCTCCTTCTCCATTaGGGTTCCCCACATATTGGCCAAGGACCACGTTGTCAGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWGHLSIHWQLLLLH*GSPHIGQGPRCQFP Trigger: TGGAAACTGACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGGAGAAGGAGAAGCTGCCAATGGATACTTAGATGACCCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS-3UTR CAA 90 bp | ATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCACATAGGTATCACACAAGCAATGTaGTCTCGATTCCAGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MSSSTEASVAMGRSSHIGITQAM*SRFQMG Trigger: CCCCATCTGGAATCGAGACAACATTGCTTGTGTGAT...ACCTATGTGAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CAA 90 bp | ATGTCTAGTAGCACTGAGGCTAGTGTGGCCATGGGCAGGTCCTCTCACATAGGTAGTCTCACTTCAGCTTaGCGTTCATTCAGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MSSSTEASVAMGRSSHIGSLTSA*RSFRAL Trigger: CAAAGCCCTGAATGAACGCAAAGCTGAAGTGAGACT...ACCTATGTGAGAGGACCTGCCCATGGCCACACTAGCCTCAGTGCTACTAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 90 bp | CTGGTGCAGGGCATTCATGTGGCTGTTGAGGTGCTTATAGGAGGCTaGATCATCATACTGGCCAGCTACATAGGAATTACGGGCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVQGIHVAVEVLIGG*IIILASYIGITGKE Trigger: TTCTTTGCCCGTAATTCCTATGTAGCTGGCCAGTATGATGATGCAGCCTCCTATAAGCACCTCAACAGCCACATGAATGCCCTGCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS GCA 90 bp | GAACCTGTAGTGGCAGGCTTTTCCATGGCCACCAGACACAACATCTaGAGGAGGTGGTTCTGCATAACATCCCTGATGATCCCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: EPVVAGFSMATRHNI*RRWFCITSLMIPNS Trigger: TGAATTTGGGATCATCAGGGATGTTATGCAGAACCACCTCCTGCAGATGTTGTGTCTGGTGGCCATGGAAAAGCCTGCCACTACAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | TCACCCGATGCACCCATGATGATAAATATGTGTGTATCAGCTTGGTaGAAGGCATCACCCTGGTACAACTCTTCCCTCAGGATCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SPDAPMMINMCVSAW*KASPWYNSSLRIPH Trigger: GTGTGGGATCCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGCATCGGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | AGGTCACCCGATGCACCCATGATGATAAATATGTGTGTATCAGCTTaGTGGAAGGCATCACCCTGGTACAACTCTTCCCTCAGGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPDAPMMINMCVSA*WKASPWYNSSLRIP Trigger: TGGGATCCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGCATCGGGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 90 bp | TATCCATTGGCAGCTTCTCCTTCTCCATTGGGGTTCCCCACATATTaGCCAAGGACCACGTTGTCAGTTTCCACCTCTGAGATACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: YPLAASPSPLGFPTY*PRTTLSVSTSEIHF Trigger: GAAGTGTATCTCAGAGGTGGAAACTGACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGGAGAAGGAGAAGCTGCCAATGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTCCAGCTTCTCCTTCTCCATaGGGGTTCCCCACATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAQELECVSKAYGPKVLPASPSP*GFPTYW Trigger: CCAATATGTGGGGAACCCCAATGGAGAAGGAGAAGC...TGGAAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CAA 90 bp | AGCATGAGGTCTCTTCCATCTGGTGAGGAGGAATGTCTAGTAGCACTGAGGCTAATTACGCTTGCACTGTaGGTGGAAGATGTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMRSLPSGEEECLVALRLITLAL*VEDVTC Trigger: GCAGGTGACATCTTCCACCAACAGTGCAAGCGTAAT...TAGCCTCAGTGCTACTAGACATTCCTCCTCACCAGATGGAAGAGACCTCATGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS-3UTR CAA 90 bp | GGTGAAAAGGGAAGATGCAGAAAGGGTGGCCAGAAGAGGCAGAGTATAGATGGTACCAGCTCATTACGCTaGCACTGTTGGTGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GEKGRCRKGGQKRQSIDGTSSLR*HCWWKM Trigger: CATCTTCCACCAACAGTGCAAGCGTAATGAGCTGGT...ACCATCTATACTCTGCCTCTTCTGGCCACCCTTTCTGCATCTTCCCTTTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR CAA 90 bp | AGCGGCTGGAAGGGAGGTGATTCAGGTCTTGTGGAAAGATGGGTGGCTCAGATATTTTCTCGATCAATCTaGTGCAGCAGTGGTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGWKGGDSGLVERWVAQIFSRSI*CSSGVK Trigger: CTTCACACCACTGCTGCACAAGATTGATCGAGAAAA...TATCTGAGCCACCCATCTTTCCACAAGACCTGAATCACCTCCCTTCCAGCCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS GCA 90 bp | GTTAAAGAACATGCCAGGCTTCTTGGTCATCATCTTGGTGTATACTaGCTCATTGGGCTGCACACGGATGACCAGCTCATTACGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VKEHARLLGHHLGVY*LIGLHTDDQLITLA Trigger: TGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCAAGAAGCCTGGCATGTTCTTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGCCCAGGAACTAGAATGTGTATCTAAGGCCTATGGTCCCAAAGTCCTTAACATGCCAGGCTTCTaGGTCATCATCTTGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VQAQELECVSKAYGPKVLNMPGF*VIILVY Trigger: ATACACCAAGATGATGACCAAGAAGCCTGGCATGTT...AAGGACTTTGGGACCATAGGCCTTAGATACACATTCTAGTTCCTGGGCTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS-3UTR CAA 90 bp | TATCTAAGGCCTATGGTCCCAAAGTCCTTCCAATATGGGGTCAATAGTCCTAATACTCATGCAGGTCTCTaGAATGTTCTTGGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLRPMVPKSFQYGVNSPNTHAGL*NVLGDC Trigger: GCAGTCACCAAGAACATTCAAGAGACCTGCATGAGT...ATTAGGACTATTGACCCCATATTGGAAGGACTTTGGGACCATAGGCCTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS TCA 72 bp | AGCTCTGTAGGTCTCTCCCGAAGGGCTTCTCCACGATaGTGCGGTTCCAGCCTCTGGTCTGACTCATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSVGLSRRASPR*CGSSLWSDSCR Trigger: CCTGCATGAGTCAGACCAGAGGCTGGAACCGCATCATCGTGGAGAAGCCCTTCGGGAGAGACCTACAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143521.2 |
||
| CDS GCA 72 bp | CTCGTACTGGAAGCCCACTCTCTTCATCAGCTCATCTaGCTCTGTGGGGCCGCGGCTGCCATATACATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVLEAHSLHQLI*LCGAAAAIYIG Trigger: CCCTATGTATATGGCAGCCGCGGCCCCACAGAGGCAGATGAGCTGATGAAGAGAGTGGGCTTCCAGTACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
||
| CDS TCA 72 bp | AGCTCTGTAGGTCTCTCCCGAAGGGCTTCTCCACGATaGTGCGGTTCCAGCCTGTCTGACTCATGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSVGLSRRASPR*CGSSLSDSCRS Trigger: AGACCTGCATGAGTCAGACAGGCTGGAACCGCATCATCGTGGAGAAGCCCTTCGGGAGAGACCTACAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 72 bp | CGCCAGGCTTCCCTGAGTTCATCACTCCGGACAAAGTaGATCTGGCTCCCACAGAAGACATCCAGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: RQASLSSSLRTK*IWLPQKTSRMR Trigger: CCTCATCCTGGATGTCTTCTGTGGGAGCCAGATGCACTTTGTCCGGAGTGATGAACTCAGGGAAGCCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS CAA 72 bp | TGCAGTCTCACTTCAGCTTTGCGTTCATTCAGGGCTTaGCCACAGCGCAGGATGAAGGGTACCCCGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: CSLTSALRSFRA*PQRRMKGTPSH Trigger: GTGGGACGGGGTACCCTTCATCCTGCGCTGTGGCAAAGCCCTGAATGAACGCAAAGCTGAAGTGAGACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 90 bp | TCTCGGAACTGCAGTCTCACTTCAGCTTTGCGTTCATTCAGGGCTTaGCCACAGCGCAGGATGAAGGGTACCCCGTCCCACCGTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SRNCSLTSALRSFRA*PQRRMKGTPSHRSF Trigger: GAATGAACGGTGGGACGGGGTACCCTTCATCCTGCGCTGTGGCAAAGCCCTGAATGAACGCAAAGCTGAAGTGAGACTGCAGTTCCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS TCA 72 bp | CTTTGCGTTCATTCAGGGCTTTGCCACAGCGCAGGATaGAGGGTACCCCGTCCCACCGTTCATTCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: LCVHSGLCHSAG*RVPRPTVHSPH Trigger: ATGTGGAGAATGAACGGTGGGACGGGGTACCCTTCATCCTGCGCTGTGGCAAAGCCCTGAATGAACGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS TCA 72 bp | CTCACTCTGCTTTCGGATGTCGTCCACTGTGAGTCGTaGGCGGGCATAGCCCACAATGAAGGTATCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LTLLSDVVHCES*AGIAHNEGIFR Trigger: CCTGAAGATACCTTCATTGTGGGCTATGCCCGCTCACGACTCACAGTGGACGACATCCGAAAGCAGAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | GCAGCTTCTCCTTCTCCATTGGGGTTCCCCACATATTaGCCAAGGACCACGTTGTCAGTTTCCACCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AASPSPLGFPTY*PRTTLSVSTSE Trigger: CTCAGAGGTGGAAACTGACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGGAGAAGGAGAAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | ACACGGATGACCAGCTCATTACGCTTGCACTGTTGGTaGAAGATGTCACCTGCCACGTCTCGGAACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TRMTSSLRLHCW*KMSPATSRNCS Trigger: ACTGCAGTTCCGAGACGTGGCAGGTGACATCTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | GGGCTGGGGCTTTTCTCGATCAATCTTGTGCAGCAGTaGTGTGAAGATACGCCAGGCTTCCCTGAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GLGLFSINLVQQ*CEDTPGFPEFI Trigger: GATGAACTCAGGGAAGCCTGGCGTATCTTCACACCACTGCTGCACAAGATTGATCGAGAAAAGCCCCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 72 bp | TCCTCACGGAAAAGAGAGGAGATGTGGTTCGACAGTTaGTTGGAGCTCTGTAGGTCTCTCCCGAAGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSRKREEMWFDS*LELCRSLPKGF Trigger: GAAGCCCTTCGGGAGAGACCTACAGAGCTCCAATCAACTGTCGAACCACATCTCCTCTCTTTTCCGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS GCA 72 bp | GTGGCAGGCTTTTCCATGGCCACCAGACACAACATCTaGAGGAGGTGGTTCTGCATAACATCCCTGATGATC | + |
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Preference number: 6 (lower is better) Translates to: VAGFSMATRHNI*RRWFCITSLMI Trigger: GATCATCAGGGATGTTATGCAGAACCACCTCCTGCAGATGTTGTGTCTGGTGGCCATGGAAAAGCCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS GCA 72 bp | TGTTGGTGGAAGATGTCACCTGCCACGTCTCGGAACTaGAGTCTCACTTCAGCTTTGCGTTCATTCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CWWKMSPATSRN*SLTSALRSFRA Trigger: AGCCCTGAATGAACGCAAAGCTGAAGTGAGACTGCAGTTCCGAGACGTGGCAGGTGACATCTTCCACCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | CACGGAAAAGAGAGGAGATGTGGTTCGACAGTTGATTaGAGCTCTGTAGGTCTCTCCCGAAGGGCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HGKERRCGSTVD*SSVGLSRRASP Trigger: TGGAGAAGCCCTTCGGGAGAGACCTACAGAGCTCCAATCAACTGTCGAACCACATCTCCTCTCTTTTCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | CTGCAAAAGTGGCAGTGGTGGACCCATGGGGTACTGTaGGGTCATCTAAGTATCCATTGGCAGCTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LQKWQWWTHGVL*GHLSIHWQLLL Trigger: AAGGAGAAGCTGCCAATGGATACTTAGATGACCCCACAGTACCCCATGGGTCCACCACTGCCACTTTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 72 bp | GCGGTTCCAGCCTCTGGTCTGACTCATGCAGGTCTCTaGAATGTTCTTGGTGACTGCTTCATAGACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVPASGLTHAGL*NVLGDCFIDCG Trigger: CCCACAGTCTATGAAGCAGTCACCAAGAACATTCAAGAGACCTGCATGAGTCAGACCAGAGGCTGGAACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143521.2 |
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| CDS CAA 90 bp | CAGGTCACCCGATGCACCCATGATGATAAATATGTGTGTATCAGCTaGGTGGAAGGCATCACCCTGGTACAACTCTTCCCTCAGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: QVTRCTHDDKYVCIS*VEGITLVQLFPQDP Trigger: GGGATCCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGCATCGGGTGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 90 bp | AACATGCCAGGCTTCTTGGTCATCATCTTGGTGTATACTGCCTCATaGGGCTGCACACGGATGACCAGCTCATTACGCTTGCACTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: NMPGFLVIILVYTAS*GCTRMTSSLRLHCW Trigger: CCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCAAGAAGCCTGGCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 72 bp | TCTTGGTGTATACTGCCTCATTGGGCTGCACACGGATaGCCAGCTCATTACGCTTGCACTGTTGGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SWCILPHWAAHG*PAHYACTVGGR Trigger: TCTTCCACCAACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 72 bp | CAAAGTGCATCTGGCTCCCACAGAAGACATCCAGGATaGGGCGTTCATAGGCATCAGGGAGCTTCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: QSASGSHRRHPG*GVHRHQGASHS Trigger: AGAATGTGAAGCTCCCTGATGCCTATGAACGCCTCATCCTGGATGTCTTCTGTGGGAGCCAGATGCACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS GCA 72 bp | GATTCTGGACCATCTCTTTGCCCAGGTAGTGGTCAATaGGGTAGATCTGGTCCTCACGGAAAAGAGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DSGPSLCPGSGQ*GRSGPHGKERR Trigger: TCTCCTCTCTTTTCCGTGAGGACCAGATCTACCGCATTGACCACTACCTGGGCAAAGAGATGGTCCAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS GCA 72 bp | CTCATTACGCTTGCACTGTTGGTGGAAGATGTCACCTaGCACGTCTCGGAACTGCAGTCTCACTTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LITLALLVEDVT*HVSELQSHFSF Trigger: AAAGCTGAAGTGAGACTGCAGTTCCGAGACGTGGCAGGTGACATCTTCCACCAACAGTGCAAGCGTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | AATATGTGTGTATCAGCTTGGTGGAAGGCATCACCCTaGTACAACTCTTCCCTCAGGATCCCACACACCTGG | + |
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Preference number: 6 (lower is better) Translates to: NMCVSAWWKASP*YNSSLRIPHTW Trigger: CCAGGTGTGTGGGATCCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 72 bp | GATGCGGTTCCAGCCTGTCTGACTCATGCAGGTCTCTaGAATGTTCTTGGTGACTGCTTCATAGACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DAVPACLTHAGL*NVLGDCFIDCG Trigger: CCCACAGTCTATGAAGCAGTCACCAAGAACATTCAAGAGACCTGCATGAGTCAGACAGGCTGGAACCGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS CAA 72 bp | GGCTTCTTGGTCATCATCTTGGTGTATACTGCCTCATaGGGCTGCACACGGATGACCAGCTCATTACGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GFLVIILVYTAS*GCTRMTSSLRL Trigger: CAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCAAGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS TCA 72 bp | CTTCAACACTTTGACCTTCTCATCACGGACATCATCTaGACCTGTAGTGGCAGGCTTTTCCATGGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LQHFDLLITDII*TCSGRLFHGHQ Trigger: CTGGTGGCCATGGAAAAGCCTGCCACTACAGGTTCAGATGATGTCCGTGATGAGAAGGTCAAAGTGTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS GCA 72 bp | TTGGTCATCATCTTGGTGTATACTGCCTCATTGGGCTaGACACGGATGACCAGCTCATTACGCTTGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: LVIILVYTASLG*TRMTSSLRLHC Trigger: ACAGTGCAAGCGTAATGAGCTGGTCATCCGTGTGCAGCCCAATGAGGCAGTATACACCAAGATGATGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004327.11 |
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| CDS CCA 72 bp | ACGGGCAAAGAACTCCTCCAGCTTAGGTCTTTCTTCTaGAGTGGCTTTAAAGAAGGGCTCACTCTGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: TGKELLQLRSFF*SGFKEGLTLLS Trigger: CGAAAGCAGAGTGAGCCCTTCTTTAAAGCCACTCCAGAAGAAAGACCTAAGCTGGAGGAGTTCTTTGCCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | CATCTAAGTATCCATTGGCAGCTTCTCCTTCTCCATTaGGGTTCCCCACATATTGGCCAAGGACCACGTTGT | + |
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Preference number: 6 (lower is better) Translates to: HLSIHWQLLLLH*GSPHIGQGPRC Trigger: ACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGGAGAAGGAGAAGCTGCCAATGGATACTTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 72 bp | CCATTGGGGTTCCCCACATATTGGCCAAGGACCACGTaGTCAGTTTCCACCTCTGAGATACACTTCAACACT | + |
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Preference number: 6 (lower is better) Translates to: PLGFPTYWPRTT*SVSTSEIHFNT Trigger: AGTGTTGAAGTGTATCTCAGAGGTGGAAACTGACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 90 bp | TCTCCTTCTCCATTGGGGTTCCCCACATATTGGCCAAGGACCACGTaGTCAGTTTCCACCTCTGAGATACACTTCAACACTTTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSPLGFPTYWPRTT*SVSTSEIHFNTLTF Trigger: GAAGGTCAAAGTGTTGAAGTGTATCTCAGAGGTGGAAACTGACAACGTGGTCCTTGGCCAATATGTGGGGAACCCCAATGGAGAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | GCACCCATGATGATAAATATGTGTGTATCAGCTTGGTaGAAGGCATCACCCTGGTACAACTCTTCCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: APMMINMCVSAW*KASPWYNSSLR Trigger: CCTGAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 90 bp | TCAGTACCAAAGGGCTCTTTAAATGTGAGGATCACACAAGCAATGTaGTCTCGATTCCAGATGGGGCCAAAGATCCTGTTGGCAAACCTC | + |
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Preference number: 6 (lower is better) Translates to: SVPKGSLNVRITQAM*SRFQMGPKILLANL Trigger: GAGGTTTGCCAACAGGATCTTTGGCCCCATCTGGAATCGAGACAACATTGCTTGTGTGATCCTCACATTTAAAGAGCCCTTTGGTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | GATGCACCCATGATGATAAATATGTGTGTATCAGCTTaGTGGAAGGCATCACCCTGGTACAACTCTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: DAPMMINMCVSA*WKASPWYNSSL Trigger: GAGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CCA 72 bp | TTTTCCATGGCCACCAGACACAACATCTGCAGGAGGTaGTTCTGCATAACATCCCTGATGATCCCAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: FSMATRHNICRR*FCITSLMIPNS Trigger: TGAATTTGGGATCATCAGGGATGTTATGCAGAACCACCTCCTGCAGATGTTGTGTCTGGTGGCCATGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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| CDS CAA 72 bp | CGATGCACCCATGATGATAAATATGTGTGTATCAGCTaGGTGGAAGGCATCACCCTGGTACAACTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RCTHDDKYVCIS*VEGITLVQLFP Trigger: AGGGAAGAGTTGTACCAGGGTGATGCCTTCCACCAAGCTGATACACACATATTTATCATCATGGGTGCATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004327.11 ENSMUST00000143521.2 |
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